Phyre 2 alignment of P64631 with c3l6gA_

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Job Description | P64631
Confidence | 44.56% | Date | Thu Jan 5 12:10:02 GMT 2012
Rank | 21 | Aligned Residues | 37
% Identity | 16% | Template | c3l6gA_
PDB info | PDB header:glycine betaine-binding protein | Chain: A: PDB Molecule:betaine abc transporter permease and substrate binding | PDBTitle: crystal structure of lactococcal opuac in its open conformation
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | K | K | T | I | E | A | T | A | P | G | C | F | E | V | F | I | H | N | D | M | E | A | A | M | K | V | K | S | G | Q | L | D | Y | Y | I | G | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | T | Q | A | M | K | E | H | G | F | . | D | V | K | T | T | A | L | D | N | A | V | A | W | Q | T | V | A | N | G | Q | A | D | G | M | V | S | A
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 340 | . | . | . | . | . | . | . | . | . |  | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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