BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (117 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P64632 Uncharacterized protein yhfU n=60 Tax=Bacteria R...   146   2e-34
UniRef50_B9Y6M0 Putative uncharacterized protein n=1 Tax=Holdema...   142   5e-33
UniRef50_Q9KF97 BH0588 protein n=2 Tax=Bacteria RepID=Q9KF97_BACHD    141   5e-33
UniRef50_A1JNG9 Putative uncharacterized protein n=2 Tax=Yersini...   137   9e-32
UniRef50_Q65MQ8 Putative uncharacterized protein n=1 Tax=Bacillu...   135   4e-31
UniRef50_C7T9M4 Conserved protein n=6 Tax=Bacteria RepID=C7T9M4_...   130   1e-29
UniRef50_B9CM76 Putative uncharacterized protein n=1 Tax=Atopobi...   124   1e-27
UniRef50_B1VPI3 Putative uncharacterized protein n=3 Tax=Strepto...   120   2e-26
UniRef50_B0K1N5 Putative uncharacterized protein n=12 Tax=Bacter...   111   1e-23

>UniRef50_P64632 Uncharacterized protein yhfU n=60 Tax=Bacteria RepID=YHFU_ECOL6
          Length = 117

 Score =  146 bits (368), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL 60
           MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL
Sbjct: 1   MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL 60

Query: 61  SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK 117
           SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK
Sbjct: 61  SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK 117


>UniRef50_B9Y6M0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM
           12042 RepID=B9Y6M0_9FIRM
          Length = 126

 Score =  142 bits (357), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/117 (40%), Positives = 64/117 (54%), Gaps = 1/117 (0%)

Query: 1   MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL 60
           M KI   GL   Q K+ IE   PG  E  +  DM AA KVKSG +D+Y+G+C TG G ++
Sbjct: 1   MLKIECCGLTALQTKQIIEKKFPGLVETSLDPDMIAARKVKSGDVDFYLGSCMTGGGGSI 60

Query: 61  SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGK-VAFGLSVEHVEHAIPMLINHL 116
           + AI V+GY    T++K G    ++ I  +I  G   AFG    H E  +P L+  L
Sbjct: 61  ATAIMVLGYGNCLTVSKQGNCPNEKQIRHLIYSGNHKAFGYVKTHTEQVVPALVQAL 117


>UniRef50_Q9KF97 BH0588 protein n=2 Tax=Bacteria RepID=Q9KF97_BACHD
          Length = 119

 Score =  141 bits (356), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 1/116 (0%)

Query: 2   KKIGVAG-LQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL 60
            KI + G + +++I+  I+  A    E  + +D++AAM +KS + DYY GAC+TG G AL
Sbjct: 1   MKIVIGGQVDKKEIESLIQEKAGERVETIVKSDLDAAMAIKSNEADYYFGACHTGGGGAL 60

Query: 61  SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           ++AIA++G N+  TI+ PG     E +   + +G  AFG + +H E A+  LI  L
Sbjct: 61  AMAIAILGKNRCATISMPGKPPVKEEVDNAVQQGAKAFGFTGDHKERAVEYLIESL 116


>UniRef50_A1JNG9 Putative uncharacterized protein n=2 Tax=Yersinia
           RepID=A1JNG9_YERE8
          Length = 121

 Score =  137 bits (346), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 1/117 (0%)

Query: 1   MKKIGVAG-LQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAA 59
           M KI + G L + +I+  +     G     I  DM+AAMKVK+G  DYY+GAC +GAG A
Sbjct: 1   MFKIAIGGQLNKNEIQDCLIKYGAGKITSDIFTDMDAAMKVKNGSFDYYVGACQSGAGGA 60

Query: 60  LSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           L++A A+IG +K  TIA    +  + +I+++I +GK AFG + + VE+++  L   L
Sbjct: 61  LAMAYALIGRDKCATIANALAQPSEANISQLIDQGKKAFGFTNDRVENSVKALCTVL 117


>UniRef50_Q65MQ8 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis
           ATCC 14580 RepID=Q65MQ8_BACLD
          Length = 119

 Score =  135 bits (340), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 1/117 (0%)

Query: 1   MKKIGVAG-LQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAA 59
           M +I + G L+++ I+K ++       EV +  D++A M VK+ + DYYIGAC TG+G A
Sbjct: 1   MVRIVIGGQLKKQAIEKLVKEIGGNNVEVLVKGDLDAVMAVKNNKADYYIGACETGSGGA 60

Query: 60  LSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           L++AIA++G +K  T+A P      E I K +  GK+AFG +    ++ + +LI +L
Sbjct: 61  LAMAIALLGKDKCVTLASPSTIKNKEEIEKEVESGKIAFGFTASTSQNILNILIPYL 117


>UniRef50_C7T9M4 Conserved protein n=6 Tax=Bacteria RepID=C7T9M4_LACRG
          Length = 120

 Score =  130 bits (327), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/118 (38%), Positives = 76/118 (64%), Gaps = 2/118 (1%)

Query: 1   MKKIGVAG-LQREQIKKTIEA-TAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGA 58
           M +I + G + +E++++ +E  TA    E+ + +D++AAM VK  + D+YIGAC TGAG 
Sbjct: 1   MTRIVIGGQMGKEELRQELEKLTAGKDVEISVKSDLDAAMAVKDNKADFYIGACETGAGG 60

Query: 59  ALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           AL++A A++G +K+ T+A P     +E I + I  GKVAFG ++   +  +P+L  +L
Sbjct: 61  ALAMATALLGSSKTLTVASPSKVLSEEDIKEGIDNGKVAFGFTINTKDTILPILAKYL 118


>UniRef50_B9CM76 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626
           RepID=B9CM76_9ACTN
          Length = 119

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 1/115 (0%)

Query: 2   KKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAALS 61
            +I V GL + + +  I+   P   EV + NDM+ A  +KSG++DYYIGACN+G GAA+S
Sbjct: 1   MRIAVGGLNKNETEAAIKKADPS-IEVVVTNDMQGAQMIKSGKVDYYIGACNSGGGAAIS 59

Query: 62  IAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           I I ++GY K CT+ K G     E I K + EGK+ FG +V+ ++  +P+L+  L
Sbjct: 60  ILIGLVGYTKCCTVCKNGGSPSFEEIKKFVDEGKLVFGTTVDTIDTTVPLLVRAL 114


>UniRef50_B1VPI3 Putative uncharacterized protein n=3 Tax=Streptomyces
           RepID=B1VPI3_STRGG
          Length = 118

 Score =  120 bits (300), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 70/116 (60%), Gaps = 2/116 (1%)

Query: 1   MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL 60
           M KI   G+ + ++ + I        +V   +DM+AAMK+++GQ DYY+G C+TGAGA+L
Sbjct: 1   MTKILTGGVGKVEVTQAIGGLGIDSLDVIPSSDMDAAMKLRAGQADYYLGTCHTGAGASL 60

Query: 61  SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
            + + ++G + SC      +  +D  IA ++A+GK AFG S++ ++   P++   +
Sbjct: 61  GVLVGLLG-SASCHTFGRSVPTEDA-IAALLADGKKAFGFSMDQIDVIAPLMARAI 114


>UniRef50_B0K1N5 Putative uncharacterized protein n=12 Tax=Bacteria
           RepID=B0K1N5_THEPX
          Length = 120

 Score =  111 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/117 (39%), Positives = 76/117 (64%), Gaps = 1/117 (0%)

Query: 1   MKKIGVAG-LQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAA 59
           M +  V G + ++++ + I+        V I +D+EAAM VK+G+ DYY+GAC TG G A
Sbjct: 1   MIRFVVGGAVDKQKVAQMIKEIGGDKVSVEIKSDIEAAMAVKNGKADYYVGACATGGGGA 60

Query: 60  LSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           L++A+A++   K  TI+ PG   ++  + K +AEGKVAFG + +H+E A+P ++N +
Sbjct: 61  LAMAMAILTAQKCATISMPGKPPQEADVKKAVAEGKVAFGFTNDHIEKAVPYIVNAI 117


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P64632 Uncharacterized protein yhfU n=60 Tax=Bacteria R...   147   1e-34
UniRef50_Q9KF97 BH0588 protein n=2 Tax=Bacteria RepID=Q9KF97_BACHD    144   1e-33
UniRef50_B9Y6M0 Putative uncharacterized protein n=1 Tax=Holdema...   143   2e-33
UniRef50_A1JNG9 Putative uncharacterized protein n=2 Tax=Yersini...   138   4e-32
UniRef50_Q65MQ8 Putative uncharacterized protein n=1 Tax=Bacillu...   136   2e-31
UniRef50_C7T9M4 Conserved protein n=6 Tax=Bacteria RepID=C7T9M4_...   132   4e-30
UniRef50_B9CM76 Putative uncharacterized protein n=1 Tax=Atopobi...   126   3e-28
UniRef50_B1VPI3 Putative uncharacterized protein n=3 Tax=Strepto...   121   7e-27
UniRef50_B0K1N5 Putative uncharacterized protein n=12 Tax=Bacter...   113   1e-24

Sequences not found previously or not previously below threshold:


CONVERGED!
>UniRef50_P64632 Uncharacterized protein yhfU n=60 Tax=Bacteria RepID=YHFU_ECOL6
          Length = 117

 Score =  147 bits (370), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL 60
           MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL
Sbjct: 1   MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL 60

Query: 61  SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK 117
           SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK
Sbjct: 61  SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK 117


>UniRef50_Q9KF97 BH0588 protein n=2 Tax=Bacteria RepID=Q9KF97_BACHD
          Length = 119

 Score =  144 bits (363), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 1/116 (0%)

Query: 2   KKIGVAG-LQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL 60
            KI + G + +++I+  I+  A    E  + +D++AAM +KS + DYY GAC+TG G AL
Sbjct: 1   MKIVIGGQVDKKEIESLIQEKAGERVETIVKSDLDAAMAIKSNEADYYFGACHTGGGGAL 60

Query: 61  SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           ++AIA++G N+  TI+ PG     E +   + +G  AFG + +H E A+  LI  L
Sbjct: 61  AMAIAILGKNRCATISMPGKPPVKEEVDNAVQQGAKAFGFTGDHKERAVEYLIESL 116


>UniRef50_B9Y6M0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM
           12042 RepID=B9Y6M0_9FIRM
          Length = 126

 Score =  143 bits (360), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/117 (40%), Positives = 64/117 (54%), Gaps = 1/117 (0%)

Query: 1   MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL 60
           M KI   GL   Q K+ IE   PG  E  +  DM AA KVKSG +D+Y+G+C TG G ++
Sbjct: 1   MLKIECCGLTALQTKQIIEKKFPGLVETSLDPDMIAARKVKSGDVDFYLGSCMTGGGGSI 60

Query: 61  SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGK-VAFGLSVEHVEHAIPMLINHL 116
           + AI V+GY    T++K G    ++ I  +I  G   AFG    H E  +P L+  L
Sbjct: 61  ATAIMVLGYGNCLTVSKQGNCPNEKQIRHLIYSGNHKAFGYVKTHTEQVVPALVQAL 117


>UniRef50_A1JNG9 Putative uncharacterized protein n=2 Tax=Yersinia
           RepID=A1JNG9_YERE8
          Length = 121

 Score =  138 bits (349), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 1/117 (0%)

Query: 1   MKKIGVAG-LQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAA 59
           M KI + G L + +I+  +     G     I  DM+AAMKVK+G  DYY+GAC +GAG A
Sbjct: 1   MFKIAIGGQLNKNEIQDCLIKYGAGKITSDIFTDMDAAMKVKNGSFDYYVGACQSGAGGA 60

Query: 60  LSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           L++A A+IG +K  TIA    +  + +I+++I +GK AFG + + VE+++  L   L
Sbjct: 61  LAMAYALIGRDKCATIANALAQPSEANISQLIDQGKKAFGFTNDRVENSVKALCTVL 117


>UniRef50_Q65MQ8 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis
           ATCC 14580 RepID=Q65MQ8_BACLD
          Length = 119

 Score =  136 bits (343), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 1/117 (0%)

Query: 1   MKKIGVAG-LQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAA 59
           M +I + G L+++ I+K ++       EV +  D++A M VK+ + DYYIGAC TG+G A
Sbjct: 1   MVRIVIGGQLKKQAIEKLVKEIGGNNVEVLVKGDLDAVMAVKNNKADYYIGACETGSGGA 60

Query: 60  LSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           L++AIA++G +K  T+A P      E I K +  GK+AFG +    ++ + +LI +L
Sbjct: 61  LAMAIALLGKDKCVTLASPSTIKNKEEIEKEVESGKIAFGFTASTSQNILNILIPYL 117


>UniRef50_C7T9M4 Conserved protein n=6 Tax=Bacteria RepID=C7T9M4_LACRG
          Length = 120

 Score =  132 bits (331), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 45/118 (38%), Positives = 76/118 (64%), Gaps = 2/118 (1%)

Query: 1   MKKIGVAG-LQREQIKKTIEA-TAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGA 58
           M +I + G + +E++++ +E  TA    E+ + +D++AAM VK  + D+YIGAC TGAG 
Sbjct: 1   MTRIVIGGQMGKEELRQELEKLTAGKDVEISVKSDLDAAMAVKDNKADFYIGACETGAGG 60

Query: 59  ALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           AL++A A++G +K+ T+A P     +E I + I  GKVAFG ++   +  +P+L  +L
Sbjct: 61  ALAMATALLGSSKTLTVASPSKVLSEEDIKEGIDNGKVAFGFTINTKDTILPILAKYL 118


>UniRef50_B9CM76 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626
           RepID=B9CM76_9ACTN
          Length = 119

 Score =  126 bits (316), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 1/115 (0%)

Query: 2   KKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAALS 61
            +I V GL + + +  I+   P   EV + NDM+ A  +KSG++DYYIGACN+G GAA+S
Sbjct: 1   MRIAVGGLNKNETEAAIKKADP-SIEVVVTNDMQGAQMIKSGKVDYYIGACNSGGGAAIS 59

Query: 62  IAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           I I ++GY K CT+ K G     E I K + EGK+ FG +V+ ++  +P+L+  L
Sbjct: 60  ILIGLVGYTKCCTVCKNGGSPSFEEIKKFVDEGKLVFGTTVDTIDTTVPLLVRAL 114


>UniRef50_B1VPI3 Putative uncharacterized protein n=3 Tax=Streptomyces
           RepID=B1VPI3_STRGG
          Length = 118

 Score =  121 bits (304), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 70/116 (60%), Gaps = 2/116 (1%)

Query: 1   MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL 60
           M KI   G+ + ++ + I        +V   +DM+AAMK+++GQ DYY+G C+TGAGA+L
Sbjct: 1   MTKILTGGVGKVEVTQAIGGLGIDSLDVIPSSDMDAAMKLRAGQADYYLGTCHTGAGASL 60

Query: 61  SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
            + + ++G + SC      +  +D  IA ++A+GK AFG S++ ++   P++   +
Sbjct: 61  GVLVGLLG-SASCHTFGRSVPTEDA-IAALLADGKKAFGFSMDQIDVIAPLMARAI 114


>UniRef50_B0K1N5 Putative uncharacterized protein n=12 Tax=Bacteria
           RepID=B0K1N5_THEPX
          Length = 120

 Score =  113 bits (284), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/117 (39%), Positives = 76/117 (64%), Gaps = 1/117 (0%)

Query: 1   MKKIGVAG-LQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAA 59
           M +  V G + ++++ + I+        V I +D+EAAM VK+G+ DYY+GAC TG G A
Sbjct: 1   MIRFVVGGAVDKQKVAQMIKEIGGDKVSVEIKSDIEAAMAVKNGKADYYVGACATGGGGA 60

Query: 60  LSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHL 116
           L++A+A++   K  TI+ PG   ++  + K +AEGKVAFG + +H+E A+P ++N +
Sbjct: 61  LAMAMAILTAQKCATISMPGKPPQEADVKKAVAEGKVAFGFTNDHIEKAVPYIVNAI 117


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.315    0.140    0.357 

Lambda     K      H
   0.267   0.0429    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 370,388,051
Number of Sequences: 3077464
Number of extensions: 11724444
Number of successful extensions: 39178
Number of sequences better than 1.0e-01: 9
Number of HSP's better than  0.1 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39152
Number of HSP's gapped (non-prelim): 18
length of query: 117
length of database: 1,040,396,356
effective HSP length: 84
effective length of query: 33
effective length of database: 781,889,380
effective search space: 25802349540
effective search space used: 25802349540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 87 (38.1 bits)
