Phyre 2 alignment of P03960 with c1v9pB_

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Job Description | P03960
Confidence | 28.96% | Date | Thu Jan 5 10:58:08 GMT 2012
Rank | 329 | Aligned Residues | 21
% Identity | 48% | Template | c1v9pB_
PDB info | PDB header:ligase | Chain: B: PDB Molecule:dna ligase; | PDBTitle: crystal structure of nad+-dependent dna ligase
Resolution | 2.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |  | . | . | . | 140 | .
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Query Sequence |  | V | P | A | D | Q | L | R | K | G | D | I | V | L | V | E | A | . | G | D | I | I | P
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Template Sequence |  | I | E | E | L | D | I | R | I | G | D | W | V | L | V | H | K | A | G | G | V | I | P
Template Known Secondary structure |  |  |  |  | T | T |  |  | T | T |  |  |  |  |  |  |  | G | G | G | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2365 | . | . | . | . | 2370 | . | . | . | . | . | . | . | . | . | 2380 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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