Phyre 2 alignment of P03960 with c3cz5B_

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Job Description | P03960
Confidence | 29.83% | Date | Thu Jan 5 10:58:08 GMT 2012
Rank | 323 | Aligned Residues | 58
% Identity | 21% | Template | c3cz5B_
PDB info | PDB header:transcription regulator | Chain: B: PDB Molecule:two-component response regulator, luxr family; | PDBTitle: crystal structure of two-component response regulator, luxr family,2 from aurantimonas sp. si85-9a1
Resolution | 2.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 449 | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . |  |  | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | K | G | G | I | K | E | R | F | A | Q | L | R | K | M | G | . | . | I | K | T | V | M | I | T | G | D | N | R | L | T | A | A | A | I | A | A | E | A | G | V | D | D | F | L | A | E | A | T | P | E | A | K | L | A | L | I | R | Q | Y | Q | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | G | P | G | G | I | E | A | T | R | H | I | R | Q | W | D | G | A | A | R | I | L | I | F | T | M | H | Q | G | S | A | F | A | L | K | A | F | E | A | G | A | S | G | Y | V | T | K | . | . | S | S | D | P | A | E | L | V | Q | A | I | E | A
Template Known Secondary structure |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S |  |  | S |  |  |  |  |  |  |  |  |  |  | T |  | S |  |  |  |  | T | . | . | T | S |  | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |  |  | . | 110 | . | . | . | . | . | . | . | . | . | 120 | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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