Phyre 2 alignment of P03960 with d1q92a_

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Job Description | P03960
Confidence | 41.99% | Date | Thu Jan 5 10:58:08 GMT 2012
Rank | 235 | Aligned Residues | 25
% Identity | 12% | Template | d1q92a_
SCOP info | HAD-like | HAD-like | 5'(3')-deoxyribonucleotidase (dNT-2)
Resolution | 1.40

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 448 | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . |  | . | . | . | . | . | . | . | 470 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | V | K | G | G | I | K | E | R | F | A | Q | L | R | K | . | M | G | I | K | T | V | M | I | T | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | P | L | P | G | A | V | E | A | V | K | E | M | A | S | L | Q | N | T | D | V | F | I | C | T | S
Template Known Secondary structure |  |  | B |  | T | T |  |  |  |  |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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