BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (121 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q0TGR8 Flagellar protein fliT n=53 Tax=Enterobacteriace... 238 3e-62 UniRef50_B2VES6 Flagellar protein FliT n=3 Tax=Erwinia RepID=B2V... 100 3e-20 UniRef50_A7FJ26 Flagellar protein fliT n=34 Tax=Enterobacteriace... 90 2e-17 UniRef50_C5BAA6 Flagellar protein FliT n=1 Tax=Edwardsiella icta... 89 6e-17 UniRef50_C6D977 Flagellar protein fliT n=5 Tax=Pectobacterium Re... 87 1e-16 UniRef50_A8GG04 Flagellar protein fliT n=3 Tax=Enterobacteriacea... 84 1e-15 UniRef50_UPI0001826DAC flagellar biosynthesis protein FliT n=1 T... 82 6e-15 UniRef50_A4WBW4 Flagellar protein fliT n=4 Tax=Enterobacteriacea... 74 2e-12 UniRef50_Q4ACK9 Repressor n=1 Tax=Edwardsiella tarda RepID=Q4ACK... 74 2e-12 UniRef50_B4EYK8 Flagella protein n=3 Tax=Proteus RepID=B4EYK8_PROMH 73 2e-12 UniRef50_A9MML7 Flagellar protein fliT n=38 Tax=Enterobacteriace... 72 6e-12 UniRef50_C6C373 Flagellar export chaperone n=1 Tax=Dickeya dadan... 72 6e-12 UniRef50_Q8RST2 Flagellar protein fliT n=3 Tax=Dickeya RepID=FLI... 66 3e-10 UniRef50_D2TYE7 Flagellar biosynthesis protein FliT n=1 Tax=Arse... 58 9e-08 UniRef50_Q1QVX6 Putative uncharacterized protein n=1 Tax=Chromoh... 45 8e-04 UniRef50_D1NZH0 Flagellar protein FliT n=4 Tax=Providencia RepID... 44 0.001 UniRef50_Q1LCL1 Flagellar protein FliT n=1 Tax=Cupriavidus metal... 40 0.021 UniRef50_Q0AAS8 Flagellar protein FliT n=1 Tax=Alkalilimnicola e... 40 0.021 UniRef50_A9IKV5 Flagellar protein FliT n=5 Tax=Bordetella RepID=... 40 0.025 >UniRef50_Q0TGR8 Flagellar protein fliT n=53 Tax=Enterobacteriaceae RepID=FLIT_ECOL5 Length = 121 Score = 238 bits (608), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 118/121 (97%), Positives = 119/121 (98%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 MN+APHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEV PSTTM Sbjct: 1 MNNAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVAPSTTM 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 QEQLRPML LILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL Sbjct: 61 QEQLRPMLLLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 Query: 121 F 121 F Sbjct: 121 F 121 >UniRef50_B2VES6 Flagellar protein FliT n=3 Tax=Erwinia RepID=B2VES6_ERWT9 Length = 122 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/119 (47%), Positives = 81/119 (68%), Gaps = 5/119 (4%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMA-YVNAVQEIAHLT--EEVDPS 57 MN A +L+ +Q ++ SQ MLRLA QW+ELI SE+ Y+ AV+++A +++ P Sbjct: 1 MNSAQYLFALYQDILTHSQCMLRLAANNQWEELIDSEVNHYLGAVEKLAQAMPHQQITPQ 60 Query: 58 TTMQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAP 116 T ++LRP+LR ILDNE++VK+LL+ R DE+A L+ Q+S QKSV +AY G VL P Sbjct: 61 T--HDRLRPVLRHILDNETEVKKLLKYRQDEIATLMQQNSRQKSVNNAYSKSAGVVLFP 117 >UniRef50_A7FJ26 Flagellar protein fliT n=34 Tax=Enterobacteriaceae RepID=FLIT_YERP3 Length = 120 Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/107 (46%), Positives = 71/107 (66%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M HL +QQ++ S+ ML LAT E WD L+ EMAY+ AV+ A++T S + Sbjct: 1 MERHQHLLSEYQQILTLSEQMLMLATVENWDALVDLEMAYLKAVENTANITISSCSSPVL 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 QE LR LR IL+NE ++K+LLQ R+D+L++LVGQS+ Q++V YG Sbjct: 61 QELLRQKLRSILENEIEIKRLLQRRLDKLSELVGQSTRQQAVNRTYG 107 >UniRef50_C5BAA6 Flagellar protein FliT n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5BAA6_EDWI9 Length = 120 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 74/116 (63%) Query: 5 PHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQL 64 P L A+ Q++ S+ M LA ++W+ LIA E+ Y+ AV A + + + +TT+Q++L Sbjct: 5 PPLLQAYHQVLVLSERMRDLAQRDEWEALIALEVEYLTAVSHTASIMSQPETATTLQDEL 64 Query: 65 RPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 R ML+ IL NE+ VKQ LQ RMDEL +L+G S Q+++ AYG G +L P + L Sbjct: 65 RQMLKQILYNETHVKQRLQARMDELRQLIGNGSRQQALSHAYGQFTGGILLPGEQL 120 >UniRef50_C6D977 Flagellar protein fliT n=5 Tax=Pectobacterium RepID=FLIT_PECCP Length = 126 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/120 (43%), Positives = 78/120 (65%), Gaps = 5/120 (4%) Query: 4 APH-LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAH--LTEEVDPSTTM 60 +PH L +QQL+ SQ +L LA QWD L+ E+ YV +V+ + + + +E+D + M Sbjct: 3 SPHRLLKDYQQLLSLSQKILHLAVNGQWDTLVEQEIVYVQSVEGLVNTPIPDEID--SVM 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 + LR +L+ ++DNE+KVKQLLQ RMDEL+ L+GQS QKS+ + Y + G + P D L Sbjct: 61 RLHLRQILQEVMDNEAKVKQLLQKRMDELSSLMGQSLKQKSINTTYNEFAGQRMLPGDAL 120 >UniRef50_A8GG04 Flagellar protein fliT n=3 Tax=Enterobacteriaceae RepID=FLIT_SERP5 Length = 122 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/87 (49%), Positives = 61/87 (70%) Query: 21 MLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQ 80 M+ LA E+W++L+ E+AYV AV+ A T + PS +QE LR L+ ILDNE+++K+ Sbjct: 21 MIALAQTERWEDLVELELAYVTAVESTAAFTGQAGPSMALQELLRNKLQQILDNETELKR 80 Query: 81 LLQIRMDELAKLVGQSSVQKSVLSAYG 107 LLQ RMD+L +L+GQS+ Q V S YG Sbjct: 81 LLQQRMDQLKELIGQSTRQNVVNSTYG 107 >UniRef50_UPI0001826DAC flagellar biosynthesis protein FliT n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826DAC Length = 124 Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 9/112 (8%) Query: 11 WQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ----EQLRP 66 W L +S ML LA +WDELI EM YV V+ I+ +P T+ EQ R Sbjct: 11 WHALHAQSIAMLNLAHTGKWDELIEQEMHYVQLVESIS-----SNPITSCPPAQVEQARF 65 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 +L+ IL+NE+++K LLQ RMDEL L+GQ+ Q+S+ S YG G +L P+ Sbjct: 66 LLKKILENENELKALLQSRMDELRNLIGQTGKQQSITSTYGKLSGNILYPES 117 >UniRef50_A4WBW4 Flagellar protein fliT n=4 Tax=Enterobacteriaceae RepID=FLIT_ENT38 Length = 120 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 1/106 (0%) Query: 11 WQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRL 70 W L S ML LA +WDELI E+AYV+ V++I+ +T S +Q+Q ML Sbjct: 11 WHALSALSNTMLSLAQSGKWDELIEQEVAYVSLVEKIS-ITPFPPGSKHIQDQAMVMLNN 69 Query: 71 ILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAP 116 +L NE +K LLQ RMDEL L+ Q+ QK+V YG G VL P Sbjct: 70 VLQNEMTLKTLLQERMDELHGLMAQTGKQKNVNITYGRLSGNVLFP 115 >UniRef50_Q4ACK9 Repressor n=1 Tax=Edwardsiella tarda RepID=Q4ACK9_EDWTA Length = 107 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 55/93 (59%) Query: 24 LATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQLLQ 83 +A ++W+ L+A EM Y+ AV A L + +P+ T QE LR +L+ IL NE+ VKQ LQ Sbjct: 1 MAQRDEWEALVALEMEYLTAVSSTAKLMSQANPTPTQQEDLRQVLKQILLNETHVKQRLQ 60 Query: 84 IRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAP 116 RMDEL +L+G S Q+++ G P Sbjct: 61 ARMDELRQLIGNGSRQQALSMPMGSSPARSCCP 93 >UniRef50_B4EYK8 Flagella protein n=3 Tax=Proteus RepID=B4EYK8_PROMH Length = 117 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 70/111 (63%) Query: 10 AWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLR 69 A++Q+++ S+ ML LA +QWD+LI EM Y+ +V+ I + + + +Q+QL ML+ Sbjct: 6 AYEQVLKLSEQMLTLAKNQQWDQLIEMEMDYLKSVEIITKMIKPTEGELIIQQQLTNMLK 65 Query: 70 LILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 IL+NE++ + LL+ R+D+LA L+ Q+ ++ V ++YG P NL Sbjct: 66 KILENENETRNLLRARLDKLAVLIRQTEQEQRVQNSYGQFSEHSYYPDLNL 116 >UniRef50_A9MML7 Flagellar protein fliT n=38 Tax=Enterobacteriaceae RepID=FLIT_SALAR Length = 122 Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 66/106 (62%) Query: 11 WQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRL 70 WQ++ SQ +L LA +W+ L+ E++Y+ +++ + + ++Q+ + ++ Sbjct: 11 WQRIALLSQSLLELAQRGEWELLLQQEVSYLQSIETVMEKQTPPGITRSIQDMVAGYIKQ 70 Query: 71 ILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAP 116 LDNE ++K LLQ R+DEL+ L+GQS+ QKS+ +AYG G +L P Sbjct: 71 TLDNEQRLKGLLQQRLDELSGLIGQSTRQKSLNNAYGRLSGMLLVP 116 >UniRef50_C6C373 Flagellar export chaperone n=1 Tax=Dickeya dadantii Ech703 RepID=C6C373_DICDC Length = 124 Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/100 (41%), Positives = 66/100 (66%), Gaps = 2/100 (2%) Query: 9 FAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM--QEQLRP 66 +QQ++E S ML+LA + +W++LI E Y++AV ++ L E + + T QE+++ Sbjct: 9 ICYQQILELSDRMLQLAMQSEWEKLIELEQEYLSAVSKLTSLIEGKNLTLTPLDQERIKV 68 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 L IL+NE ++ LQ RMDEL +L+GQS+ Q+SV +AY Sbjct: 69 YLEKILNNEQTIRDKLQARMDELRELIGQSTRQQSVNAAY 108 >UniRef50_Q8RST2 Flagellar protein fliT n=3 Tax=Dickeya RepID=FLIT_ERWCH Length = 120 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 65/108 (60%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M + L +Q L++ + + +A WD+++ E+ Y+ +++ I+ + + +T+ Sbjct: 1 MENLSPLLIEYQGLLKLIRNIKAMALNGLWDDVVEQEIVYIQSIERISQINVPANIPSTV 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGD 108 Q Q R +L+ ILD ES+VK+LLQ RM ELA L+ QS QKS+ + Y + Sbjct: 61 QLQFRQLLQDILDTESQVKELLQNRMQELAVLIQQSQNQKSINNTYAE 108 >UniRef50_D2TYE7 Flagellar biosynthesis protein FliT n=1 Tax=Arsenophonus nasoniae RepID=D2TYE7_9ENTR Length = 97 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 58/91 (63%) Query: 18 SQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESK 77 SQ ML LA QW++L+ SE Y AV+++ L S + QL +L+ IL NE+ Sbjct: 5 SQQMLALAQLGQWEQLLVSEKGYQQAVEQVTALGSIAGLSKPLSHQLTELLQAILTNENA 64 Query: 78 VKQLLQIRMDELAKLVGQSSVQKSVLSAYGD 108 ++QL++ +M+ELA+L+ Q++ Q+ + S YG+ Sbjct: 65 IRQLMERQMNELAQLIKQTAQQQQLQSRYGE 95 >UniRef50_Q1QVX6 Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVX6_CHRSD Length = 127 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 53/94 (56%), Gaps = 1/94 (1%) Query: 17 KSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNES 76 +S+ ML A +++WD LI +V V+++ E + + +L IL+++ Sbjct: 17 RSRAMLESANQQEWDALIQQRARFVADVEKLRREPESDRLTEQERRHCAELLEEILEHDR 76 Query: 77 KVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQG 110 +++ L R +EL++L+G S Q++++ AY +QG Sbjct: 77 AIRERLDARCEELSQLIGSSRRQQALMRAY-NQG 109 >UniRef50_D1NZH0 Flagellar protein FliT n=4 Tax=Providencia RepID=D1NZH0_9ENTR Length = 129 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 49/90 (54%) Query: 18 SQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESK 77 S+ ++ LA +W+ LI+ E YV AV+ + LT + + + E +L I++NE Sbjct: 25 SENLVALAKSGEWETLISRETDYVLAVENLTALTHDFEQHQPITEDFIQLLHQIIENERI 84 Query: 78 VKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 K+ LQ ++ L+K + QK + ++YG Sbjct: 85 TKEYLQNHLNFLSKEMKHLDQQKVLNNSYG 114 >UniRef50_Q1LCL1 Flagellar protein FliT n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LCL1_RALME Length = 114 Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 4/109 (3%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M P + +++LV S+ ML A WD + + YV V+ + + P T+ Sbjct: 5 MPATPSVIQIYEELVLLSEQMLEAARHGNWDAMTEVQRVYVAQVETLR--GRDTHPPATL 62 Query: 61 QEQL--RPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 QE++ + +L +L +++ ++ L+ ++ L +L+G + ++ V AYG Sbjct: 63 QERMQRQALLAKLLAHDAAIRDLVMPQLQRLGELLGSARRRRDVNEAYG 111 >UniRef50_Q0AAS8 Flagellar protein FliT n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAS8_ALHEH Length = 111 Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%) Query: 22 LRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTT----MQEQLRPMLRLILDNESK 77 L LA E+WDEL+ASE L +DPS+ +Q+ L LR I D + + Sbjct: 24 LELARSERWDELVASETRR-------GELARAIDPSSVHAPDLQQALVTRLRRITDMDDQ 76 Query: 78 VKQLLQIRMDELAK 91 ++ LL+ R++EL + Sbjct: 77 LRPLLEGRLEELGR 90 >UniRef50_A9IKV5 Flagellar protein FliT n=5 Tax=Bordetella RepID=A9IKV5_BORPD Length = 116 Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 8/101 (7%) Query: 11 WQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP---- 66 ++++ + ML A W ++A Y +V+++ L DP T + R Sbjct: 14 YREIATLTDEMLAAARAGDWGVVLACGQRYCESVEQLRRL----DPVTPLDNAGREAKYE 69 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 +L IL+N++ + L +M L+ L+G+ Q+S+LSAYG Sbjct: 70 LLVRILENDAATRDLAVPQMARLSDLLGRMKRQQSLLSAYG 110 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0TGR8 Flagellar protein fliT n=53 Tax=Enterobacteriace... 145 3e-34 UniRef50_C5BAA6 Flagellar protein FliT n=1 Tax=Edwardsiella icta... 134 1e-30 UniRef50_A4WBW4 Flagellar protein fliT n=4 Tax=Enterobacteriacea... 130 2e-29 UniRef50_C6D977 Flagellar protein fliT n=5 Tax=Pectobacterium Re... 129 2e-29 UniRef50_B2VES6 Flagellar protein FliT n=3 Tax=Erwinia RepID=B2V... 128 5e-29 UniRef50_UPI0001826DAC flagellar biosynthesis protein FliT n=1 T... 125 4e-28 UniRef50_A9MML7 Flagellar protein fliT n=38 Tax=Enterobacteriace... 120 1e-26 UniRef50_A7FJ26 Flagellar protein fliT n=34 Tax=Enterobacteriace... 119 2e-26 UniRef50_Q8RST2 Flagellar protein fliT n=3 Tax=Dickeya RepID=FLI... 117 2e-25 UniRef50_C6C373 Flagellar export chaperone n=1 Tax=Dickeya dadan... 116 2e-25 UniRef50_B4EYK8 Flagella protein n=3 Tax=Proteus RepID=B4EYK8_PROMH 113 2e-24 UniRef50_D1NZH0 Flagellar protein FliT n=4 Tax=Providencia RepID... 110 1e-23 UniRef50_Q4ACK9 Repressor n=1 Tax=Edwardsiella tarda RepID=Q4ACK... 109 2e-23 UniRef50_A8GG04 Flagellar protein fliT n=3 Tax=Enterobacteriacea... 107 8e-23 UniRef50_Q1QVX6 Putative uncharacterized protein n=1 Tax=Chromoh... 100 1e-20 UniRef50_D2TYE7 Flagellar biosynthesis protein FliT n=1 Tax=Arse... 79 6e-14 Sequences not found previously or not previously below threshold: UniRef50_A9IKV5 Flagellar protein FliT n=5 Tax=Bordetella RepID=... 70 3e-11 UniRef50_C1DHL9 Flagellar protein n=1 Tax=Azotobacter vinelandii... 69 5e-11 UniRef50_Q1LCL1 Flagellar protein FliT n=1 Tax=Cupriavidus metal... 68 7e-11 UniRef50_A6SXY9 FliT flagellar protein n=4 Tax=Betaproteobacteri... 67 2e-10 UniRef50_Q0JYM8 Flagellar protein n=3 Tax=Cupriavidus RepID=Q0JY... 65 5e-10 UniRef50_C6BEN2 Flagellar export chaperone n=10 Tax=Ralstonia Re... 62 8e-09 UniRef50_C6BLH1 Flagellar protein FliT n=2 Tax=Ralstonia pickett... 59 6e-08 UniRef50_C6MIW8 Flagellar export chaperone n=1 Tax=Nitrosomonas ... 59 7e-08 UniRef50_C5UZY8 Flagellar export chaperone n=1 Tax=Gallionella f... 55 7e-07 UniRef50_A6GTZ4 Flagellar protein FliT n=1 Tax=Limnobacter sp. M... 54 1e-06 UniRef50_B2JIQ3 Putative flagellar protein FliT n=1 Tax=Burkhold... 53 3e-06 UniRef50_C6P5L0 Flagellar export chaperone n=1 Tax=Sideroxydans ... 53 4e-06 UniRef50_Q0AHH4 Flagellar protein FliT n=2 Tax=Nitrosomonas RepI... 52 4e-06 UniRef50_Q3SII1 Flagellar protein FliT n=1 Tax=Thiobacillus deni... 50 2e-05 UniRef50_C4SBN3 Putative uncharacterized protein n=2 Tax=Yersini... 49 4e-05 UniRef50_A2SJS8 Flagellar chaperone n=4 Tax=Burkholderiales RepI... 48 1e-04 UniRef50_C7RSG9 Putative uncharacterized protein n=1 Tax=Candida... 47 2e-04 UniRef50_Q0AAS8 Flagellar protein FliT n=1 Tax=Alkalilimnicola e... 47 2e-04 UniRef50_Q2NWZ5 Flagellar protein FliT n=1 Tax=Sodalis glossinid... 47 3e-04 UniRef50_A9ABS5 Flagellar protein n=48 Tax=Burkholderia RepID=A9... 46 3e-04 UniRef50_B1Y381 Flagellar chaperone n=9 Tax=cellular organisms R... 46 4e-04 UniRef50_Q1GZT8 Flagellar protein FliT n=1 Tax=Methylobacillus f... 45 5e-04 UniRef50_Q2Y9C7 Flagellar protein FliT n=1 Tax=Nitrosospira mult... 45 5e-04 UniRef50_A4BUD2 Putative uncharacterized protein n=1 Tax=Nitroco... 42 0.004 UniRef50_D0FQ37 Conserved uncharacterized protein n=2 Tax=Erwini... 42 0.004 UniRef50_A1WUC7 Putative uncharacterized protein n=1 Tax=Halorho... 39 0.055 UniRef50_B9Z882 Putative uncharacterized protein n=1 Tax=Lutiell... 38 0.063 UniRef50_C5CXS0 Putative uncharacterized protein n=1 Tax=Variovo... 38 0.089 UniRef50_Q7UF18 Similar to type 8 capsule gene Cap8B n=1 Tax=Rho... 38 0.092 UniRef50_A9BQ52 Flagellar protein FliT n=1 Tax=Delftia acidovora... 38 0.095 >UniRef50_Q0TGR8 Flagellar protein fliT n=53 Tax=Enterobacteriaceae RepID=FLIT_ECOL5 Length = 121 Score = 145 bits (367), Expect = 3e-34, Method: Composition-based stats. Identities = 118/121 (97%), Positives = 119/121 (98%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 MN+APHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEV PSTTM Sbjct: 1 MNNAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVAPSTTM 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 QEQLRPML LILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL Sbjct: 61 QEQLRPMLLLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 Query: 121 F 121 F Sbjct: 121 F 121 >UniRef50_C5BAA6 Flagellar protein FliT n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5BAA6_EDWI9 Length = 120 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 50/120 (41%), Positives = 75/120 (62%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M P L A+ Q++ S+ M LA ++W+ LIA E+ Y+ AV A + + + +TT+ Sbjct: 1 MYGLPPLLQAYHQVLVLSERMRDLAQRDEWEALIALEVEYLTAVSHTASIMSQPETATTL 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 Q++LR ML+ IL NE+ VKQ LQ RMDEL +L+G S Q+++ AYG G +L P + L Sbjct: 61 QDELRQMLKQILYNETHVKQRLQARMDELRQLIGNGSRQQALSHAYGQFTGGILLPGEQL 120 >UniRef50_A4WBW4 Flagellar protein fliT n=4 Tax=Enterobacteriaceae RepID=FLIT_ENT38 Length = 120 Score = 130 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 MN + W L S ML LA +WDELI E+AYV+ V++I+ +T S + Sbjct: 1 MNDSSLSLKKWHALSALSNTMLSLAQSGKWDELIEQEVAYVSLVEKIS-ITPFPPGSKHI 59 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 Q+Q ML +L NE +K LLQ RMDEL L+ Q+ QK+V YG G VL P + Sbjct: 60 QDQAMVMLNNVLQNEMTLKTLLQERMDELHGLMAQTGKQKNVNITYGRLSGNVLFPGE 117 >UniRef50_C6D977 Flagellar protein fliT n=5 Tax=Pectobacterium RepID=FLIT_PECCP Length = 126 Score = 129 bits (325), Expect = 2e-29, Method: Composition-based stats. Identities = 49/120 (40%), Positives = 72/120 (60%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M L +QQL+ SQ +L LA QWD L+ E+ YV +V+ + + + + M Sbjct: 1 MASPHRLLKDYQQLLSLSQKILHLAVNGQWDTLVEQEIVYVQSVEGLVNTPIPDEIDSVM 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 + LR +L+ ++DNE+KVKQLLQ RMDEL+ L+GQS QKS+ + Y + G + P D L Sbjct: 61 RLHLRQILQEVMDNEAKVKQLLQKRMDELSSLMGQSLKQKSINTTYNEFAGQRMLPGDAL 120 >UniRef50_B2VES6 Flagellar protein FliT n=3 Tax=Erwinia RepID=B2VES6_ERWT9 Length = 122 Score = 128 bits (322), Expect = 5e-29, Method: Composition-based stats. Identities = 54/117 (46%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEM-AYVNAVQEIAHLTEEVDPSTT 59 MN A +L+ +Q ++ SQ MLRLA QW+ELI SE+ Y+ AV+++A + Sbjct: 1 MNSAQYLFALYQDILTHSQCMLRLAANNQWEELIDSEVNHYLGAVEKLAQAMPHQQITPQ 60 Query: 60 MQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAP 116 ++LRP+LR ILDNE++VK+LL+ R DE+A L+ Q+S QKSV +AY G VL P Sbjct: 61 THDRLRPVLRHILDNETEVKKLLKYRQDEIATLMQQNSRQKSVNNAYSKSAGVVLFP 117 >UniRef50_UPI0001826DAC flagellar biosynthesis protein FliT n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826DAC Length = 124 Score = 125 bits (314), Expect = 4e-28, Method: Composition-based stats. Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 1/118 (0%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 MN W L +S ML LA +WDELI EM YV V+ I+ P + Sbjct: 1 MNIPSAALSHWHALHAQSIAMLNLAHTGKWDELIEQEMHYVQLVESISSNPITSCPPAQV 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 EQ R +L+ IL+NE+++K LLQ RMDEL L+GQ+ Q+S+ S YG G +L P+ Sbjct: 61 -EQARFLLKKILENENELKALLQSRMDELRNLIGQTGKQQSITSTYGKLSGNILYPES 117 >UniRef50_A9MML7 Flagellar protein fliT n=38 Tax=Enterobacteriaceae RepID=FLIT_SALAR Length = 122 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 67/117 (57%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M WQ++ SQ +L LA +W+ L+ E++Y+ +++ + + ++ Sbjct: 1 MTSTVEFINRWQRIALLSQSLLELAQRGEWELLLQQEVSYLQSIETVMEKQTPPGITRSI 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQ 117 Q+ + ++ LDNE ++K LLQ R+DEL+ L+GQS+ QKS+ +AYG G +L P Sbjct: 61 QDMVAGYIKQTLDNEQRLKGLLQQRLDELSGLIGQSTRQKSLNNAYGRLSGMLLVPD 117 >UniRef50_A7FJ26 Flagellar protein fliT n=34 Tax=Enterobacteriaceae RepID=FLIT_YERP3 Length = 120 Score = 119 bits (299), Expect = 2e-26, Method: Composition-based stats. Identities = 51/118 (43%), Positives = 73/118 (61%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M HL +QQ++ S+ ML LAT E WD L+ EMAY+ AV+ A++T S + Sbjct: 1 MERHQHLLSEYQQILTLSEQMLMLATVENWDALVDLEMAYLKAVENTANITISSCSSPVL 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 QE LR LR IL+NE ++K+LLQ R+D+L++LVGQS+ Q++V YG L + Sbjct: 61 QELLRQKLRSILENEIEIKRLLQRRLDKLSELVGQSTRQQAVNRTYGQFPDQALLLGE 118 >UniRef50_Q8RST2 Flagellar protein fliT n=3 Tax=Dickeya RepID=FLIT_ERWCH Length = 120 Score = 117 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 67/114 (58%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M + L +Q L++ + + +A WD+++ E+ Y+ +++ I+ + + +T+ Sbjct: 1 MENLSPLLIEYQGLLKLIRNIKAMALNGLWDDVVEQEIVYIQSIERISQINVPANIPSTV 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVL 114 Q Q R +L+ ILD ES+VK+LLQ RM ELA L+ QS QKS+ + Y + +L Sbjct: 61 QLQFRQLLQDILDTESQVKELLQNRMQELAVLIQQSQNQKSINNTYAEFSDDIL 114 >UniRef50_C6C373 Flagellar export chaperone n=1 Tax=Dickeya dadantii Ech703 RepID=C6C373_DICDC Length = 124 Score = 116 bits (290), Expect = 2e-25, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 71/120 (59%), Gaps = 3/120 (2%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M+ +QQ++E S ML+LA + +W++LI E Y++AV ++ L E + + T Sbjct: 1 MDAHKSALICYQQILELSDRMLQLAMQSEWEKLIELEQEYLSAVSKLTSLIEGKNLTLTP 60 Query: 61 --QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ-GGFVLAPQ 117 QE+++ L IL+NE ++ LQ RMDEL +L+GQS+ Q+SV +AY G + P Sbjct: 61 LDQERIKVYLEKILNNEQTIRDKLQARMDELRELIGQSTRQQSVNAAYHKFSSGNSMLPG 120 >UniRef50_B4EYK8 Flagella protein n=3 Tax=Proteus RepID=B4EYK8_PROMH Length = 117 Score = 113 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 71/114 (62%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP 66 + A++Q+++ S+ ML LA +QWD+LI EM Y+ +V+ I + + + +Q+QL Sbjct: 3 IMAAYEQVLKLSEQMLTLAKNQQWDQLIEMEMDYLKSVEIITKMIKPTEGELIIQQQLTN 62 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 ML+ IL+NE++ + LL+ R+D+LA L+ Q+ ++ V ++YG P NL Sbjct: 63 MLKKILENENETRNLLRARLDKLAVLIRQTEQEQRVQNSYGQFSEHSYYPDLNL 116 >UniRef50_D1NZH0 Flagellar protein FliT n=4 Tax=Providencia RepID=D1NZH0_9ENTR Length = 129 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 55/104 (52%) Query: 6 HLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLR 65 +L ++ ++ S+ ++ LA +W+ LI+ E YV AV+ + LT + + + E Sbjct: 13 YLLEVYRNVLILSENLVALAKSGEWETLISRETDYVLAVENLTALTHDFEQHQPITEDFI 72 Query: 66 PMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ 109 +L I++NE K+ LQ ++ L+K + QK + ++YG Sbjct: 73 QLLHQIIENERITKEYLQNHLNFLSKEMKHLDQQKVLNNSYGQF 116 >UniRef50_Q4ACK9 Repressor n=1 Tax=Edwardsiella tarda RepID=Q4ACK9_EDWTA Length = 107 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 55/95 (57%) Query: 24 LATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQLLQ 83 +A ++W+ L+A EM Y+ AV A L + +P+ T QE LR +L+ IL NE+ VKQ LQ Sbjct: 1 MAQRDEWEALVALEMEYLTAVSSTAKLMSQANPTPTQQEDLRQVLKQILLNETHVKQRLQ 60 Query: 84 IRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 RMDEL +L+G S Q+++ G P Sbjct: 61 ARMDELRQLIGNGSRQQALSMPMGSSPARSCCPAS 95 >UniRef50_A8GG04 Flagellar protein fliT n=3 Tax=Enterobacteriaceae RepID=FLIT_SERP5 Length = 122 Score = 107 bits (268), Expect = 8e-23, Method: Composition-based stats. Identities = 50/118 (42%), Positives = 71/118 (60%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M L A+QQ+ S M+ LA E+W++L+ E+AYV AV+ A T + PS + Sbjct: 1 MERQQQLLAAYQQIHSLSSQMIALAQTERWEDLVELELAYVTAVESTAAFTGQAGPSMAL 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 QE LR L+ ILDNE+++K+LLQ RMD+L +L+GQS+ Q V S YG L + Sbjct: 61 QELLRNKLQQILDNETELKRLLQQRMDQLKELIGQSTRQNVVNSTYGQFNDRALLLGE 118 >UniRef50_Q1QVX6 Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVX6_CHRSD Length = 127 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 58/113 (51%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M+ A + ++ +S+ ML A +++WD LI +V V+++ E + Sbjct: 1 MSDASGRLDLYADMLVRSRAMLESANQQEWDALIQQRARFVADVEKLRREPESDRLTEQE 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFV 113 + +L IL+++ +++ L R +EL++L+G S Q++++ AY G + Sbjct: 61 RRHCAELLEEILEHDRAIRERLDARCEELSQLIGSSRRQQALMRAYNQGQGKL 113 >UniRef50_D2TYE7 Flagellar biosynthesis protein FliT n=1 Tax=Arsenophonus nasoniae RepID=D2TYE7_9ENTR Length = 97 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 60/96 (62%) Query: 14 LVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILD 73 ++ SQ ML LA QW++L+ SE Y AV+++ L S + QL +L+ IL Sbjct: 1 MLTISQQMLALAQLGQWEQLLVSEKGYQQAVEQVTALGSIAGLSKPLSHQLTELLQAILT 60 Query: 74 NESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ 109 NE+ ++QL++ +M+ELA+L+ Q++ Q+ + S YG+ Sbjct: 61 NENAIRQLMERQMNELAQLIKQTAQQQQLQSRYGEF 96 >UniRef50_A9IKV5 Flagellar protein FliT n=5 Tax=Bordetella RepID=A9IKV5_BORPD Length = 116 Score = 69.7 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 49/101 (48%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP 66 + ++++ + ML A W ++A Y +V+++ L +E Sbjct: 10 VLDIYREIATLTDEMLAAARAGDWGVVLACGQRYCESVEQLRRLDPVTPLDNAGREAKYE 69 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 +L IL+N++ + L +M L+ L+G+ Q+S+LSAYG Sbjct: 70 LLVRILENDAATRDLAVPQMARLSDLLGRMKRQQSLLSAYG 110 >UniRef50_C1DHL9 Flagellar protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DHL9_AZOVD Length = 127 Score = 68.5 bits (166), Expect = 5e-11, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M L +++QL+ +SQ ML LA W L+ + + + + L V Sbjct: 1 MGEGRQLIDSYEQLLLQSQSMLELARRGDWTTLLQEKSCGLIDAERLQQLEAGVSLGRQE 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 + + +L+ IL +++++ L R DEL L+ S Q+ + AY Sbjct: 61 RLRKAELLKQILALDAEIRTHLLARRDELVLLMRNSRRQRELNRAY 106 >UniRef50_Q1LCL1 Flagellar protein FliT n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LCL1_RALME Length = 114 Score = 68.1 bits (165), Expect = 7e-11, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 51/107 (47%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M P + +++LV S+ ML A WD + + YV V+ + + Sbjct: 5 MPATPSVIQIYEELVLLSEQMLEAARHGNWDAMTEVQRVYVAQVETLRGRDTHPPATLQE 64 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 + Q + +L +L +++ ++ L+ ++ L +L+G + ++ V AYG Sbjct: 65 RMQRQALLAKLLAHDAAIRDLVMPQLQRLGELLGSARRRRDVNEAYG 111 >UniRef50_A6SXY9 FliT flagellar protein n=4 Tax=Betaproteobacteria RepID=A6SXY9_JANMA Length = 112 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 48/107 (44%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M + + ++ + + ML A W+EL A E V + V + Sbjct: 1 MMNEQEIICLYENVATITDQMLAAARVGDWEELTALEQRCAAQVSMLKSGETPVALTGAE 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 +E+ +++ IL ++ +++ + + M +L+ L+ + ++ + AYG Sbjct: 61 RERKVEIIKKILADDREIRNITEPWMAKLSMLINSTGTERKLNHAYG 107 >UniRef50_Q0JYM8 Flagellar protein n=3 Tax=Cupriavidus RepID=Q0JYM8_RALEH Length = 113 Score = 65.4 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 46/102 (45%) Query: 6 HLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLR 65 + +++++ S M A WD + A + Y+ V + + E S + + Sbjct: 9 PIVDCYEEILALSARMHEAAQAADWDTVTALQQGYLALVDRLRQMDHEAPFSDAERMRRY 68 Query: 66 PMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 +L IL +++++ L ++ +L ++ S Q + +AYG Sbjct: 69 QLLDRILTYDARIRDLAMPQLKKLGDMLTSSRRQIELSAAYG 110 >UniRef50_C6BEN2 Flagellar export chaperone n=10 Tax=Ralstonia RepID=C6BEN2_RALP1 Length = 125 Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 1/104 (0%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP 66 L+ ++ + S+ M+ A WDE+ E ++ + H +Q + R Sbjct: 21 LFACYEAIASLSEDMVDAAERGDWDEVSLLERECAAHMERLGHGLRPALSHEEIQRK-RD 79 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQG 110 ++ IL N+++V+ L+ R DEL +LV AY Sbjct: 80 LMMRILANDARVRALVCPRQDELMRLVSGERRAIGARQAYAAVS 123 >UniRef50_C6BLH1 Flagellar protein FliT n=2 Tax=Ralstonia pickettii RepID=C6BLH1_RALP1 Length = 118 Score = 58.5 bits (140), Expect = 6e-08, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 46/110 (41%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 + + L+ ++ + + M+ A W+ + E V + S Sbjct: 7 IKDSESLFACYEAIARLTAEMVGAAEVGNWEVVSTLERESAIYVDALRRSEPHPPLSHAD 66 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQG 110 E+ R +L IL+++++V+ ++ R++ L K + + + +AYG Sbjct: 67 IERKRTLLVRILEDDARVRAMVYPRLERLQKRIDTARRASTASNAYGSMA 116 >UniRef50_C6MIW8 Flagellar export chaperone n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIW8_9PROT Length = 111 Score = 58.5 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 51/106 (48%), Gaps = 1/106 (0%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M++A H + ++ ++ ML A +WD+L++ E + E + Sbjct: 1 MDNA-HTIIIYNTILATTEKMLTAAQNSEWDQLVSLEQECRKLTDSLKKNDTEPPLDKEL 59 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 Q+Q ++ ILDN+++++ +++ M L +++ + +++ Y Sbjct: 60 QQQKIKIIHQILDNDAQIRAIIEPWMARLQEMLSINRRTRNLQQTY 105 >UniRef50_C5UZY8 Flagellar export chaperone n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZY8_9PROT Length = 108 Score = 55.0 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 47/105 (44%) Query: 3 HAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQE 62 A L ++ L + M A +WD+LI+ E + I + + ++ Sbjct: 2 KASDLVSDYESLSHLTGEMRVAANAGEWDKLISLEQLSGQYLVRIQSAEASAPLNDSSRQ 61 Query: 63 QLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 ++ ++R ILD+++++ +L Q M +L + + + + YG Sbjct: 62 RIVGLIRKILDDDTEISKLTQAWMGQLQTSLNSNRQELRLNQVYG 106 >UniRef50_A6GTZ4 Flagellar protein FliT n=1 Tax=Limnobacter sp. MED105 RepID=A6GTZ4_9BURK Length = 115 Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTE--EVDPSTT 59 ++ + + + +SQ+ML A WDEL A+E + E+ + E + + + Sbjct: 6 DNNGAIMKLYAAIANQSQVMLDSAKAGNWDELCAAEEQCSRLIHELQAIKEAQQTELNEK 65 Query: 60 MQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGD 108 + Q L+ IL +++ ++ + + R+ +L + + ++ + + ++YG Sbjct: 66 ERSQHIGYLKKILADDAAIRDITEPRLKQLEEFLRAANNSQKLSNSYGS 114 >UniRef50_B2JIQ3 Putative flagellar protein FliT n=1 Tax=Burkholderia phymatum STM815 RepID=B2JIQ3_BURP8 Length = 109 Score = 52.7 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 44/97 (45%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M+ + ++ + S M+ A + W++L+ + Y + V + H + V S Sbjct: 1 MSSNADYFARYEAIAAISVRMVMAARDALWNDLVLLQDEYRHLVDALKHAEDGVRLSDDE 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSS 97 + + ++R IL N++ V+ L RM +L L S Sbjct: 61 RARKFDLIRQILANDATVRDLANPRMAKLQALFAPSR 97 >UniRef50_C6P5L0 Flagellar export chaperone n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5L0_9PROT Length = 106 Score = 52.7 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 3/101 (2%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIA-HLTEEVDPSTTMQEQLR 65 L +Q+L + M A +WD LI+ E V+EI +P Q+ Sbjct: 4 LLEDYQRLSGITGEMRNAAASGEWDRLISLEQECKRKVEEIKPRDIVPSNPEERAQKLA- 62 Query: 66 PMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 +L+ IL +++ ++ + M++L +++ + ++ + Y Sbjct: 63 -LLKKILADDADIRSRTESWMEQLQRIMQSTRSEQRLQQTY 102 >UniRef50_Q0AHH4 Flagellar protein FliT n=2 Tax=Nitrosomonas RepID=Q0AHH4_NITEC Length = 123 Score = 52.3 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 46/105 (43%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ 61 N + A++ ++ + ML+ A WD+L+A E + S T Q Sbjct: 15 NDGMQMITAYEAILTITNQMLQAAKNSDWDKLVALEHDCKYLTNRLMEQHTRQPLSETQQ 74 Query: 62 EQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 ++ +++ IL +++++ + + RM L ++ ++ + Y Sbjct: 75 KKKIDLIQQILARDAEIRTITEPRMTHLQNMLTNHDHKRKLGQTY 119 >UniRef50_Q3SII1 Flagellar protein FliT n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SII1_THIDA Length = 109 Score = 50.0 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP 66 + ++ L E + ML A E +W+ L E + V + + + Q Sbjct: 6 MLSTYETLSELTGTMLNAAREGEWEHLATLEQRCRSYVGTLMEA-APIPLNAQEQRAKVA 64 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ 109 ++R IL N+++++ L + R+ EL + + + V + ++AYG Q Sbjct: 65 IIRAILQNDAQIRALTEPRLHELQQRLQATRVGQRGMAAYGAQ 107 >UniRef50_C4SBN3 Putative uncharacterized protein n=2 Tax=Yersinia RepID=C4SBN3_YERMO Length = 91 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 24 LATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQLLQ 83 +A E +WDE I Y+ + +I + + ++ L ML +L+NE ++ + L+ Sbjct: 1 MAKEGKWDEFIELAEVYIITLHDIIE-NQPAEMMQDEKKNLSVMLTSLLENEDEITKTLK 59 Query: 84 IRMDELAKLVGQSSVQKSVLSAYGDQ 109 R+D L K + K AY Q Sbjct: 60 SRLDVLRKDMSSLQHGKKCSKAYSSQ 85 >UniRef50_A2SJS8 Flagellar chaperone n=4 Tax=Burkholderiales RepID=A2SJS8_METPP Length = 99 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 43/91 (47%) Query: 4 APHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQ 63 + L ++ + S+ ML A WD+++ E A + ++ + ++ Sbjct: 2 STPLLNYYEAIERASEQMLEAARGGNWDQVVKLEGACAVLINQLKQAAATRELGADERQL 61 Query: 64 LRPMLRLILDNESKVKQLLQIRMDELAKLVG 94 +++ IL N+++V+ L + +++L +L+ Sbjct: 62 KTRIMKRILVNDAEVRTLAEPWLEDLDQLLA 92 >UniRef50_C7RSG9 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSG9_9PROT Length = 96 Score = 47.3 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 1/87 (1%) Query: 8 YFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPM 67 A + L+ S+ ML A W+ L E A + T D S +E+ R + Sbjct: 5 LSALEHLLALSEEMLGAAAAGDWETLTEREAARRALAHSLPA-TLTSDLSRASEERARLV 63 Query: 68 LRLILDNESKVKQLLQIRMDELAKLVG 94 + L + ++ L++ R++EL ++ Sbjct: 64 IEACLRCDLSIRPLVEARLNELRVVLR 90 >UniRef50_Q0AAS8 Flagellar protein FliT n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAS8_ALHEH Length = 111 Score = 46.9 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTT-MQEQLR 65 + A +L ++ L LA E+WDEL+ASE E+A + +Q+ L Sbjct: 9 MLEAAIELEHLARRRLELARSERWDELVASETRR----GELARAIDPSSVHAPDLQQALV 64 Query: 66 PMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGG 111 LR I D + +++ LL+ R++EL + + + + AY G Sbjct: 65 TRLRRITDMDDQLRPLLEGRLEELGRTLLDARKGAAGNRAYQRFRG 110 >UniRef50_Q2NWZ5 Flagellar protein FliT n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NWZ5_SODGM Length = 113 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 42/95 (44%) Query: 15 VEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDN 74 ++ S ++ A + WD ++A YV ++E + +T +E + +L N Sbjct: 15 LQLSYQIIAKARLKDWDSVVALNNRYVITLREAIEHIQSAGMATYEEEGRMNDIEQLLKN 74 Query: 75 ESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ 109 E +++ L+ R+ L + +GQ + Y Q Sbjct: 75 EKEIRALIGTRLTTLEQDMGQLRHSSQGNNTYHRQ 109 >UniRef50_A9ABS5 Flagellar protein n=48 Tax=Burkholderia RepID=A9ABS5_BURM1 Length = 110 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 40/106 (37%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 MN + ++ L S MLR A W L + Y+ V + ++ + Sbjct: 1 MNRKADYFARYEALAAVSGRMLRAARGADWHALSGLQDEYLRLVDALKEAERDIALDESE 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 + ++R IL +++ ++ L + L+ L K + Y Sbjct: 61 LGRKLALIRRILADDAAIRDLASPEIARLSALFETRRSTKVLTELY 106 >UniRef50_B1Y381 Flagellar chaperone n=9 Tax=cellular organisms RepID=B1Y381_LEPCP Length = 114 Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 41/88 (46%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP 66 L ++ + S ML A WD ++ E A + ++ H E + + Sbjct: 19 LLQYYEAIETASHEMLEAARAGDWDRVVKLEGACAVLISQLKHAATERRLGSEEAQLKAR 78 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVG 94 +++ IL N+++++ L + +++L +++ Sbjct: 79 IMQRILVNDAEIRHLAEPWLEDLDQMMA 106 >UniRef50_Q1GZT8 Flagellar protein FliT n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GZT8_METFK Length = 113 Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 40/107 (37%) Query: 3 HAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQE 62 + L + + ML A + W+ L E+ ++ + Q+ Sbjct: 2 SIQQTLSLYAALADITDQMLAAAKQHDWERLAMLEVECAERIKRADENKCDEPLREPEQK 61 Query: 63 QLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ 109 L+ ILD++ +++ ++ M L+ ++ ++ + + Y Sbjct: 62 IKYSHLKRILDSDREIRNIIDPWMVRLSDILTNNTANRQMFDTYKQL 108 >UniRef50_Q2Y9C7 Flagellar protein FliT n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9C7_NITMU Length = 113 Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 1/106 (0%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M + +Q L + + M A +WD L E V ++ E V M Sbjct: 2 MMTSAENLAVFQSLSDLTGEMREAAQGSEWDRLAGLERRCAALVAQLESA-EAVRLPQDM 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 Q Q ++ IL +++ +++ + + ++ L+G +S + V AY Sbjct: 61 QRQKVELIHKILADDAAIREYTEPWIRQVQALLGTASRSRCVRQAY 106 >UniRef50_A4BUD2 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUD2_9GAMM Length = 116 Score = 42.3 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 13 QLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLIL 72 +L+E ++ ML L W L A A+ T + + +R +L Sbjct: 22 RLLELTREMLDLGHVGDW-VLFAQREEERQALSRTIFATPVPRTAAPLVADC---IRRVL 77 Query: 73 DNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQG 110 D + ++ L + D+ ++ + + + +AY Sbjct: 78 DLDQELITLAEAHRDQASRAMRDAQRGRQAANAYRRFS 115 >UniRef50_D0FQ37 Conserved uncharacterized protein n=2 Tax=Erwinia pyrifoliae RepID=D0FQ37_ERWPY Length = 112 Score = 42.3 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 1/101 (0%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP 66 L Q++ + ++ L+ E WDE IA+ + + A + S R Sbjct: 5 LMSELQRISQLHDELMVLSCEGHWDEFIAA-LDPCADLLHEAMQLDSSALSPEELAAARE 63 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 ++ + +NE+ + Q ++ R+D+L + + + K+V +AY Sbjct: 64 LMTTLQNNEALMVQRMRARLDQLREEMSGLNKGKAVSNAYA 104 >UniRef50_A1WUC7 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUC7_HALHL Length = 115 Score = 38.9 bits (89), Expect = 0.055, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 13 QLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLIL 72 +L E S+ M R A WD ++ N ++E DP+ + R L L Sbjct: 22 RLRELSRQMRRCAEAGDWDGVMER-----NGLREKQARQLPEDPNHPGADLARQALAESL 76 Query: 73 DNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQG 110 + + V+ ++ D L Q+ AY Sbjct: 77 ECDRAVRAWMEAERDRLGAASRDEHHQREARDAYSRYS 114 >UniRef50_B9Z882 Putative uncharacterized protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z882_9NEIS Length = 105 Score = 38.5 bits (88), Expect = 0.063, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 42/94 (44%), Gaps = 2/94 (2%) Query: 13 QLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLIL 72 +L ++ ML A+ +W+ ++ +++ + E P+ +LR +L ++ Sbjct: 13 KLAHITEAMLAAASNAEWERFTELDIERDAHYRQV--ILEVDAPALANSPELREVLDTVV 70 Query: 73 DNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 +++ LL R EL + ++ Q+ + Y Sbjct: 71 TQSREIESLLIERCAELQYSLSLTNRQQKLQKIY 104 >UniRef50_C5CXS0 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXS0_VARPS Length = 92 Score = 38.1 bits (87), Expect = 0.089, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 21 MLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQ 80 M LA +WD L E V + + V EQ+R ++ I ++ +V Sbjct: 4 MASLARAREWDRLPELEARCAQLVDRLKAVGA-VSLDAAQLEQVRGLIARIHADQDEVCA 62 Query: 81 LLQIRMDELAKLVGQSSVQKSVLSAYG 107 L++ +++ L + Q + + AYG Sbjct: 63 LVKPQLERLVAKMAQLQNRSDLGKAYG 89 >UniRef50_Q7UF18 Similar to type 8 capsule gene Cap8B n=1 Tax=Rhodopirellula baltica RepID=Q7UF18_RHOBA Length = 785 Score = 38.1 bits (87), Expect = 0.092, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%) Query: 12 QQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLI 71 +Q++ ++ M+ A E EL+A+E ++ A QE + S Q++ R + + Sbjct: 186 EQVMGRANEMVNKAKTEVEAELVAAEQEHLKARQEAPLFFQGEGSSNIYQDRYRRLQDEL 245 Query: 72 LD---NESKVKQLLQIRMDELAKLVGQSS 97 LD ES VK L R+DE K + +S+ Sbjct: 246 LDLDIQESTVKTRL-TRVDETLKEMDEST 273 >UniRef50_A9BQ52 Flagellar protein FliT n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BQ52_DELAS Length = 99 Score = 38.1 bits (87), Expect = 0.095, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 37/75 (49%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP 66 L ++ + + S ML+ A + W+ + E ++++ + + + +++ Sbjct: 5 LIDFYRAIEDSSAKMLQAAQNKDWEGVTRYEGTCAVLIEQLRLKSHDEPLAPDQRKEKAR 64 Query: 67 MLRLILDNESKVKQL 81 +++ IL N+++++ L Sbjct: 65 IMQRILRNDAQIRTL 79 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A4WBW4 Flagellar protein fliT n=4 Tax=Enterobacteriacea... 126 2e-28 UniRef50_Q0TGR8 Flagellar protein fliT n=53 Tax=Enterobacteriace... 125 3e-28 UniRef50_C6D977 Flagellar protein fliT n=5 Tax=Pectobacterium Re... 123 2e-27 UniRef50_UPI0001826DAC flagellar biosynthesis protein FliT n=1 T... 123 2e-27 UniRef50_C5BAA6 Flagellar protein FliT n=1 Tax=Edwardsiella icta... 122 4e-27 UniRef50_B2VES6 Flagellar protein FliT n=3 Tax=Erwinia RepID=B2V... 121 5e-27 UniRef50_A6SXY9 FliT flagellar protein n=4 Tax=Betaproteobacteri... 121 5e-27 UniRef50_C6C373 Flagellar export chaperone n=1 Tax=Dickeya dadan... 115 3e-25 UniRef50_A7FJ26 Flagellar protein fliT n=34 Tax=Enterobacteriace... 115 3e-25 UniRef50_A9MML7 Flagellar protein fliT n=38 Tax=Enterobacteriace... 115 4e-25 UniRef50_B4EYK8 Flagella protein n=3 Tax=Proteus RepID=B4EYK8_PROMH 110 1e-23 UniRef50_C6BLH1 Flagellar protein FliT n=2 Tax=Ralstonia pickett... 109 3e-23 UniRef50_Q8RST2 Flagellar protein fliT n=3 Tax=Dickeya RepID=FLI... 109 3e-23 UniRef50_Q0AHH4 Flagellar protein FliT n=2 Tax=Nitrosomonas RepI... 108 5e-23 UniRef50_A9IKV5 Flagellar protein FliT n=5 Tax=Bordetella RepID=... 108 7e-23 UniRef50_C6MIW8 Flagellar export chaperone n=1 Tax=Nitrosomonas ... 107 1e-22 UniRef50_C6BEN2 Flagellar export chaperone n=10 Tax=Ralstonia Re... 105 5e-22 UniRef50_Q0JYM8 Flagellar protein n=3 Tax=Cupriavidus RepID=Q0JY... 105 6e-22 UniRef50_D1NZH0 Flagellar protein FliT n=4 Tax=Providencia RepID... 104 8e-22 UniRef50_Q1LCL1 Flagellar protein FliT n=1 Tax=Cupriavidus metal... 104 9e-22 UniRef50_A8GG04 Flagellar protein fliT n=3 Tax=Enterobacteriacea... 102 4e-21 UniRef50_Q1GZT8 Flagellar protein FliT n=1 Tax=Methylobacillus f... 99 3e-20 UniRef50_B2JIQ3 Putative flagellar protein FliT n=1 Tax=Burkhold... 99 3e-20 UniRef50_C5UZY8 Flagellar export chaperone n=1 Tax=Gallionella f... 99 4e-20 UniRef50_A6GTZ4 Flagellar protein FliT n=1 Tax=Limnobacter sp. M... 97 2e-19 UniRef50_Q2Y9C7 Flagellar protein FliT n=1 Tax=Nitrosospira mult... 97 2e-19 UniRef50_Q1QVX6 Putative uncharacterized protein n=1 Tax=Chromoh... 96 3e-19 UniRef50_Q3SII1 Flagellar protein FliT n=1 Tax=Thiobacillus deni... 95 6e-19 UniRef50_A9ABS5 Flagellar protein n=48 Tax=Burkholderia RepID=A9... 94 2e-18 UniRef50_Q4ACK9 Repressor n=1 Tax=Edwardsiella tarda RepID=Q4ACK... 93 2e-18 UniRef50_C1DHL9 Flagellar protein n=1 Tax=Azotobacter vinelandii... 93 2e-18 UniRef50_A2SJS8 Flagellar chaperone n=4 Tax=Burkholderiales RepI... 93 3e-18 UniRef50_B1Y381 Flagellar chaperone n=9 Tax=cellular organisms R... 91 1e-17 UniRef50_C6P5L0 Flagellar export chaperone n=1 Tax=Sideroxydans ... 90 1e-17 UniRef50_Q2NWZ5 Flagellar protein FliT n=1 Tax=Sodalis glossinid... 80 2e-14 UniRef50_D2TYE7 Flagellar biosynthesis protein FliT n=1 Tax=Arse... 76 4e-13 UniRef50_C4SBN3 Putative uncharacterized protein n=2 Tax=Yersini... 74 1e-12 UniRef50_Q0AAS8 Flagellar protein FliT n=1 Tax=Alkalilimnicola e... 70 2e-11 UniRef50_C7RSG9 Putative uncharacterized protein n=1 Tax=Candida... 67 1e-10 Sequences not found previously or not previously below threshold: UniRef50_A9BQ52 Flagellar protein FliT n=1 Tax=Delftia acidovora... 75 1e-12 UniRef50_C5CXS0 Putative uncharacterized protein n=1 Tax=Variovo... 59 5e-08 UniRef50_A1K919 Hypothetical flagellar related protein FliT n=1 ... 56 4e-07 UniRef50_B9TCZ8 Putative uncharacterized protein n=1 Tax=Ricinus... 56 5e-07 UniRef50_A4BUD2 Putative uncharacterized protein n=1 Tax=Nitroco... 51 1e-05 UniRef50_D0FQ37 Conserved uncharacterized protein n=2 Tax=Erwini... 50 3e-05 UniRef50_D1C175 Putative uncharacterized protein n=1 Tax=Sphaero... 48 8e-05 UniRef50_Q47HZ5 Putative uncharacterized protein n=1 Tax=Dechlor... 48 1e-04 UniRef50_A1WUC7 Putative uncharacterized protein n=1 Tax=Halorho... 47 1e-04 UniRef50_B9Z882 Putative uncharacterized protein n=1 Tax=Lutiell... 46 3e-04 UniRef50_B3PGR7 Putative uncharacterized protein n=1 Tax=Cellvib... 45 0.001 UniRef50_C4KAR4 Flagellar-like protein FliT n=1 Tax=Thauera sp. ... 43 0.003 UniRef50_UPI00016B2480 DNA gyrase subunit A n=1 Tax=candidate di... 41 0.012 UniRef50_C5S5H5 Putative uncharacterized protein n=1 Tax=Allochr... 40 0.022 UniRef50_Q2BI08 Putative uncharacterized protein n=1 Tax=Neptuni... 40 0.027 UniRef50_A4A602 Putative uncharacterized protein n=2 Tax=unclass... 40 0.032 UniRef50_B9ZNY7 Putative uncharacterized protein n=1 Tax=Thioalk... 38 0.079 >UniRef50_A4WBW4 Flagellar protein fliT n=4 Tax=Enterobacteriaceae RepID=FLIT_ENT38 Length = 120 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 49/118 (41%), Positives = 64/118 (54%), Gaps = 1/118 (0%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 MN + W L S ML LA +WDELI E+AYV+ V++I +T S + Sbjct: 1 MNDSSLSLKKWHALSALSNTMLSLAQSGKWDELIEQEVAYVSLVEKI-SITPFPPGSKHI 59 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 Q+Q ML +L NE +K LLQ RMDEL L+ Q+ QK+V YG G VL P + Sbjct: 60 QDQAMVMLNNVLQNEMTLKTLLQERMDELHGLMAQTGKQKNVNITYGRLSGNVLFPGE 117 >UniRef50_Q0TGR8 Flagellar protein fliT n=53 Tax=Enterobacteriaceae RepID=FLIT_ECOL5 Length = 121 Score = 125 bits (315), Expect = 3e-28, Method: Composition-based stats. Identities = 118/121 (97%), Positives = 119/121 (98%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 MN+APHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEV PSTTM Sbjct: 1 MNNAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVAPSTTM 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 QEQLRPML LILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL Sbjct: 61 QEQLRPMLLLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 Query: 121 F 121 F Sbjct: 121 F 121 >UniRef50_C6D977 Flagellar protein fliT n=5 Tax=Pectobacterium RepID=FLIT_PECCP Length = 126 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 49/120 (40%), Positives = 72/120 (60%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M L +QQL+ SQ +L LA QWD L+ E+ YV +V+ + + + + M Sbjct: 1 MASPHRLLKDYQQLLSLSQKILHLAVNGQWDTLVEQEIVYVQSVEGLVNTPIPDEIDSVM 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 + LR +L+ ++DNE+KVKQLLQ RMDEL+ L+GQS QKS+ + Y + G + P D L Sbjct: 61 RLHLRQILQEVMDNEAKVKQLLQKRMDELSSLMGQSLKQKSINTTYNEFAGQRMLPGDAL 120 >UniRef50_UPI0001826DAC flagellar biosynthesis protein FliT n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826DAC Length = 124 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 1/118 (0%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 MN W L +S ML LA +WDELI EM YV V+ I+ P + Sbjct: 1 MNIPSAALSHWHALHAQSIAMLNLAHTGKWDELIEQEMHYVQLVESISSNPITSCPPAQV 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 EQ R +L+ IL+NE+++K LLQ RMDEL L+GQ+ Q+S+ S YG G +L P+ Sbjct: 61 -EQARFLLKKILENENELKALLQSRMDELRNLIGQTGKQQSITSTYGKLSGNILYPES 117 >UniRef50_C5BAA6 Flagellar protein FliT n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5BAA6_EDWI9 Length = 120 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 50/120 (41%), Positives = 75/120 (62%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M P L A+ Q++ S+ M LA ++W+ LIA E+ Y+ AV A + + + +TT+ Sbjct: 1 MYGLPPLLQAYHQVLVLSERMRDLAQRDEWEALIALEVEYLTAVSHTASIMSQPETATTL 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 Q++LR ML+ IL NE+ VKQ LQ RMDEL +L+G S Q+++ AYG G +L P + L Sbjct: 61 QDELRQMLKQILYNETHVKQRLQARMDELRQLIGNGSRQQALSHAYGQFTGGILLPGEQL 120 >UniRef50_B2VES6 Flagellar protein FliT n=3 Tax=Erwinia RepID=B2VES6_ERWT9 Length = 122 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 54/117 (46%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEM-AYVNAVQEIAHLTEEVDPSTT 59 MN A +L+ +Q ++ SQ MLRLA QW+ELI SE+ Y+ AV+++A + Sbjct: 1 MNSAQYLFALYQDILTHSQCMLRLAANNQWEELIDSEVNHYLGAVEKLAQAMPHQQITPQ 60 Query: 60 MQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAP 116 ++LRP+LR ILDNE++VK+LL+ R DE+A L+ Q+S QKSV +AY G VL P Sbjct: 61 THDRLRPVLRHILDNETEVKKLLKYRQDEIATLMQQNSRQKSVNNAYSKSAGVVLFP 117 >UniRef50_A6SXY9 FliT flagellar protein n=4 Tax=Betaproteobacteria RepID=A6SXY9_JANMA Length = 112 Score = 121 bits (305), Expect = 5e-27, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 48/112 (42%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M + + ++ + + ML A W+EL A E V + V + Sbjct: 1 MMNEQEIICLYENVATITDQMLAAARVGDWEELTALEQRCAAQVSMLKSGETPVALTGAE 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGF 112 +E+ +++ IL ++ +++ + + M +L+ L+ + ++ + AYG Sbjct: 61 RERKVEIIKKILADDREIRNITEPWMAKLSMLINSTGTERKLNHAYGAGQSN 112 >UniRef50_C6C373 Flagellar export chaperone n=1 Tax=Dickeya dadantii Ech703 RepID=C6C373_DICDC Length = 124 Score = 115 bits (289), Expect = 3e-25, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 71/120 (59%), Gaps = 3/120 (2%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTT- 59 M+ +QQ++E S ML+LA + +W++LI E Y++AV ++ L E + + T Sbjct: 1 MDAHKSALICYQQILELSDRMLQLAMQSEWEKLIELEQEYLSAVSKLTSLIEGKNLTLTP 60 Query: 60 -MQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ-GGFVLAPQ 117 QE+++ L IL+NE ++ LQ RMDEL +L+GQS+ Q+SV +AY G + P Sbjct: 61 LDQERIKVYLEKILNNEQTIRDKLQARMDELRELIGQSTRQQSVNAAYHKFSSGNSMLPG 120 >UniRef50_A7FJ26 Flagellar protein fliT n=34 Tax=Enterobacteriaceae RepID=FLIT_YERP3 Length = 120 Score = 115 bits (289), Expect = 3e-25, Method: Composition-based stats. Identities = 51/118 (43%), Positives = 73/118 (61%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M HL +QQ++ S+ ML LAT E WD L+ EMAY+ AV+ A++T S + Sbjct: 1 MERHQHLLSEYQQILTLSEQMLMLATVENWDALVDLEMAYLKAVENTANITISSCSSPVL 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 QE LR LR IL+NE ++K+LLQ R+D+L++LVGQS+ Q++V YG L + Sbjct: 61 QELLRQKLRSILENEIEIKRLLQRRLDKLSELVGQSTRQQAVNRTYGQFPDQALLLGE 118 >UniRef50_A9MML7 Flagellar protein fliT n=38 Tax=Enterobacteriaceae RepID=FLIT_SALAR Length = 122 Score = 115 bits (288), Expect = 4e-25, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 67/117 (57%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M WQ++ SQ +L LA +W+ L+ E++Y+ +++ + + ++ Sbjct: 1 MTSTVEFINRWQRIALLSQSLLELAQRGEWELLLQQEVSYLQSIETVMEKQTPPGITRSI 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQ 117 Q+ + ++ LDNE ++K LLQ R+DEL+ L+GQS+ QKS+ +AYG G +L P Sbjct: 61 QDMVAGYIKQTLDNEQRLKGLLQQRLDELSGLIGQSTRQKSLNNAYGRLSGMLLVPD 117 >UniRef50_B4EYK8 Flagella protein n=3 Tax=Proteus RepID=B4EYK8_PROMH Length = 117 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 71/116 (61%) Query: 5 PHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQL 64 + A++Q+++ S+ ML LA +QWD+LI EM Y+ +V+ I + + + +Q+QL Sbjct: 1 MDIMAAYEQVLKLSEQMLTLAKNQQWDQLIEMEMDYLKSVEIITKMIKPTEGELIIQQQL 60 Query: 65 RPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNL 120 ML+ IL+NE++ + LL+ R+D+LA L+ Q+ ++ V ++YG P NL Sbjct: 61 TNMLKKILENENETRNLLRARLDKLAVLIRQTEQEQRVQNSYGQFSEHSYYPDLNL 116 >UniRef50_C6BLH1 Flagellar protein FliT n=2 Tax=Ralstonia pickettii RepID=C6BLH1_RALP1 Length = 118 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 46/110 (41%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 + + L+ ++ + + M+ A W+ + E V + S Sbjct: 7 IKDSESLFACYEAIARLTAEMVGAAEVGNWEVVSTLERESAIYVDALRRSEPHPPLSHAD 66 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQG 110 E+ R +L IL+++++V+ ++ R++ L K + + + +AYG Sbjct: 67 IERKRTLLVRILEDDARVRAMVYPRLERLQKRIDTARRASTASNAYGSMA 116 >UniRef50_Q8RST2 Flagellar protein fliT n=3 Tax=Dickeya RepID=FLIT_ERWCH Length = 120 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 67/114 (58%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M + L +Q L++ + + +A WD+++ E+ Y+ +++ I+ + + +T+ Sbjct: 1 MENLSPLLIEYQGLLKLIRNIKAMALNGLWDDVVEQEIVYIQSIERISQINVPANIPSTV 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVL 114 Q Q R +L+ ILD ES+VK+LLQ RM ELA L+ QS QKS+ + Y + +L Sbjct: 61 QLQFRQLLQDILDTESQVKELLQNRMQELAVLIQQSQNQKSINNTYAEFSDDIL 114 >UniRef50_Q0AHH4 Flagellar protein FliT n=2 Tax=Nitrosomonas RepID=Q0AHH4_NITEC Length = 123 Score = 108 bits (270), Expect = 5e-23, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 46/105 (43%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ 61 N + A++ ++ + ML+ A WD+L+A E + S T Q Sbjct: 15 NDGMQMITAYEAILTITNQMLQAAKNSDWDKLVALEHDCKYLTNRLMEQHTRQPLSETQQ 74 Query: 62 EQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 ++ +++ IL +++++ + + RM L ++ ++ + Y Sbjct: 75 KKKIDLIQQILARDAEIRTITEPRMTHLQNMLTNHDHKRKLGQTY 119 >UniRef50_A9IKV5 Flagellar protein FliT n=5 Tax=Bordetella RepID=A9IKV5_BORPD Length = 116 Score = 108 bits (269), Expect = 7e-23, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 49/107 (45%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ 61 + ++++ + ML A W ++A Y +V+++ L + Sbjct: 5 PRPACVLDIYREIATLTDEMLAAARAGDWGVVLACGQRYCESVEQLRRLDPVTPLDNAGR 64 Query: 62 EQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGD 108 E +L IL+N++ + L +M L+ L+G+ Q+S+LSAYG Sbjct: 65 EAKYELLVRILENDAATRDLAVPQMARLSDLLGRMKRQQSLLSAYGA 111 >UniRef50_C6MIW8 Flagellar export chaperone n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIW8_9PROT Length = 111 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 47/105 (44%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ 61 H + ++ ++ ML A +WD+L++ E + E +Q Sbjct: 1 MDNAHTIIIYNTILATTEKMLTAAQNSEWDQLVSLEQECRKLTDSLKKNDTEPPLDKELQ 60 Query: 62 EQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 +Q ++ ILDN+++++ +++ M L +++ + +++ Y Sbjct: 61 QQKIKIIHQILDNDAQIRAIIEPWMARLQEMLSINRRTRNLQQTY 105 >UniRef50_C6BEN2 Flagellar export chaperone n=10 Tax=Ralstonia RepID=C6BEN2_RALP1 Length = 125 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 1/109 (0%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ 61 + + L+ ++ + S+ M+ A WDE+ E ++ + H S Sbjct: 16 SDSAGLFACYEAIASLSEDMVDAAERGDWDEVSLLERECAAHMERLGHGLRPA-LSHEEI 74 Query: 62 EQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQG 110 ++ R ++ IL N+++V+ L+ R DEL +LV AY Sbjct: 75 QRKRDLMMRILANDARVRALVCPRQDELMRLVSGERRAIGARQAYAAVS 123 >UniRef50_Q0JYM8 Flagellar protein n=3 Tax=Cupriavidus RepID=Q0JYM8_RALEH Length = 113 Score = 105 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 46/103 (44%) Query: 6 HLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLR 65 + +++++ S M A WD + A + Y+ V + + E S + + Sbjct: 9 PIVDCYEEILALSARMHEAAQAADWDTVTALQQGYLALVDRLRQMDHEAPFSDAERMRRY 68 Query: 66 PMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGD 108 +L IL +++++ L ++ +L ++ S Q + +AYG Sbjct: 69 QLLDRILTYDARIRDLAMPQLKKLGDMLTSSRRQIELSAAYGA 111 >UniRef50_D1NZH0 Flagellar protein FliT n=4 Tax=Providencia RepID=D1NZH0_9ENTR Length = 129 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 56/108 (51%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ 61 + +L ++ ++ S+ ++ LA +W+ LI+ E YV AV+ + LT + + + Sbjct: 9 KNPLYLLEVYRNVLILSENLVALAKSGEWETLISRETDYVLAVENLTALTHDFEQHQPIT 68 Query: 62 EQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ 109 E +L I++NE K+ LQ ++ L+K + QK + ++YG Sbjct: 69 EDFIQLLHQIIENERITKEYLQNHLNFLSKEMKHLDQQKVLNNSYGQF 116 >UniRef50_Q1LCL1 Flagellar protein FliT n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LCL1_RALME Length = 114 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 51/107 (47%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M P + +++LV S+ ML A WD + + YV V+ + + Sbjct: 5 MPATPSVIQIYEELVLLSEQMLEAARHGNWDAMTEVQRVYVAQVETLRGRDTHPPATLQE 64 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYG 107 + Q + +L +L +++ ++ L+ ++ L +L+G + ++ V AYG Sbjct: 65 RMQRQALLAKLLAHDAAIRDLVMPQLQRLGELLGSARRRRDVNEAYG 111 >UniRef50_A8GG04 Flagellar protein fliT n=3 Tax=Enterobacteriaceae RepID=FLIT_SERP5 Length = 122 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 50/118 (42%), Positives = 71/118 (60%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M L A+QQ+ S M+ LA E+W++L+ E+AYV AV+ A T + PS + Sbjct: 1 MERQQQLLAAYQQIHSLSSQMIALAQTERWEDLVELELAYVTAVESTAAFTGQAGPSMAL 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 QE LR L+ ILDNE+++K+LLQ RMD+L +L+GQS+ Q V S YG L + Sbjct: 61 QELLRNKLQQILDNETELKRLLQQRMDQLKELIGQSTRQNVVNSTYGQFNDRALLLGE 118 >UniRef50_Q1GZT8 Flagellar protein FliT n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GZT8_METFK Length = 113 Score = 99.3 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 40/108 (37%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ 61 + L + + ML A + W+ L E+ ++ + Q Sbjct: 1 MSIQQTLSLYAALADITDQMLAAAKQHDWERLAMLEVECAERIKRADENKCDEPLREPEQ 60 Query: 62 EQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ 109 + L+ ILD++ +++ ++ M L+ ++ ++ + + Y Sbjct: 61 KIKYSHLKRILDSDREIRNIIDPWMVRLSDILTNNTANRQMFDTYKQL 108 >UniRef50_B2JIQ3 Putative flagellar protein FliT n=1 Tax=Burkholderia phymatum STM815 RepID=B2JIQ3_BURP8 Length = 109 Score = 99.3 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 46/108 (42%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M+ + ++ + S M+ A + W++L+ + Y + V + H + V S Sbjct: 1 MSSNADYFARYEAIAAISVRMVMAARDALWNDLVLLQDEYRHLVDALKHAEDGVRLSDDE 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGD 108 + + ++R IL N++ V+ L RM +L L S + Y Sbjct: 61 RARKFDLIRQILANDATVRDLANPRMAKLQALFAPSRPAIVLKELYQA 108 >UniRef50_C5UZY8 Flagellar export chaperone n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZY8_9PROT Length = 108 Score = 99.3 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 47/107 (43%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ 61 A L ++ L + M A +WD+LI+ E + I + + + Sbjct: 1 MKASDLVSDYESLSHLTGEMRVAANAGEWDKLISLEQLSGQYLVRIQSAEASAPLNDSSR 60 Query: 62 EQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGD 108 +++ ++R ILD+++++ +L Q M +L + + + + YG Sbjct: 61 QRIVGLIRKILDDDTEISKLTQAWMGQLQTSLNSNRQELRLNQVYGA 107 >UniRef50_A6GTZ4 Flagellar protein FliT n=1 Tax=Limnobacter sp. MED105 RepID=A6GTZ4_9BURK Length = 115 Score = 96.9 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTE--EVDPSTT 59 ++ + + + +SQ+ML A WDEL A+E + E+ + E + + + Sbjct: 6 DNNGAIMKLYAAIANQSQVMLDSAKAGNWDELCAAEEQCSRLIHELQAIKEAQQTELNEK 65 Query: 60 MQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGD 108 + Q L+ IL +++ ++ + + R+ +L + + ++ + + ++YG Sbjct: 66 ERSQHIGYLKKILADDAAIRDITEPRLKQLEEFLRAANNSQKLSNSYGS 114 >UniRef50_Q2Y9C7 Flagellar protein FliT n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9C7_NITMU Length = 113 Score = 96.6 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M + +Q L + + M A +WD L E V ++ V M Sbjct: 2 MMTSAENLAVFQSLSDLTGEMREAAQGSEWDRLAGLERRCAALVAQLESAEA-VRLPQDM 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQG 110 Q Q ++ IL +++ +++ + + ++ L+G +S + V AY Sbjct: 61 QRQKVELIHKILADDAAIREYTEPWIRQVQALLGTASRSRCVRQAYESGA 110 >UniRef50_Q1QVX6 Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVX6_CHRSD Length = 127 Score = 96.2 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 58/113 (51%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M+ A + ++ +S+ ML A +++WD LI +V V+++ E + Sbjct: 1 MSDASGRLDLYADMLVRSRAMLESANQQEWDALIQQRARFVADVEKLRREPESDRLTEQE 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFV 113 + +L IL+++ +++ L R +EL++L+G S Q++++ AY G + Sbjct: 61 RRHCAELLEEILEHDRAIRERLDARCEELSQLIGSSRRQQALMRAYNQGQGKL 113 >UniRef50_Q3SII1 Flagellar protein FliT n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SII1_THIDA Length = 109 Score = 95.0 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 1/110 (0%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ 61 + + ++ L E + ML A E +W+ L E + V + + + Q Sbjct: 1 MTSNEMLSTYETLSELTGTMLNAAREGEWEHLATLEQRCRSYVGTLMEA-APIPLNAQEQ 59 Query: 62 EQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGG 111 ++R IL N+++++ L + R+ EL + + + V + ++AYG Q Sbjct: 60 RAKVAIIRAILQNDAQIRALTEPRLHELQQRLQATRVGQRGMAAYGAQRA 109 >UniRef50_A9ABS5 Flagellar protein n=48 Tax=Burkholderia RepID=A9ABS5_BURM1 Length = 110 Score = 93.9 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 40/106 (37%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 MN + ++ L S MLR A W L + Y+ V + ++ + Sbjct: 1 MNRKADYFARYEALAAVSGRMLRAARGADWHALSGLQDEYLRLVDALKEAERDIALDESE 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 + ++R IL +++ ++ L + L+ L K + Y Sbjct: 61 LGRKLALIRRILADDAAIRDLASPEIARLSALFETRRSTKVLTELY 106 >UniRef50_Q4ACK9 Repressor n=1 Tax=Edwardsiella tarda RepID=Q4ACK9_EDWTA Length = 107 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 55/95 (57%) Query: 24 LATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQLLQ 83 +A ++W+ L+A EM Y+ AV A L + +P+ T QE LR +L+ IL NE+ VKQ LQ Sbjct: 1 MAQRDEWEALVALEMEYLTAVSSTAKLMSQANPTPTQQEDLRQVLKQILLNETHVKQRLQ 60 Query: 84 IRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQD 118 RMDEL +L+G S Q+++ G P Sbjct: 61 ARMDELRQLIGNGSRQQALSMPMGSSPARSCCPAS 95 >UniRef50_C1DHL9 Flagellar protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DHL9_AZOVD Length = 127 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M L +++QL+ +SQ ML LA W L+ + + + + L V Sbjct: 1 MGEGRQLIDSYEQLLLQSQSMLELARRGDWTTLLQEKSCGLIDAERLQQLEAGVSLGRQE 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 + + +L+ IL +++++ L R DEL L+ S Q+ + AY Sbjct: 61 RLRKAELLKQILALDAEIRTHLLARRDELVLLMRNSRRQRELNRAY 106 >UniRef50_A2SJS8 Flagellar chaperone n=4 Tax=Burkholderiales RepID=A2SJS8_METPP Length = 99 Score = 92.7 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 43/91 (47%) Query: 4 APHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQ 63 + L ++ + S+ ML A WD+++ E A + ++ + ++ Sbjct: 2 STPLLNYYEAIERASEQMLEAARGGNWDQVVKLEGACAVLINQLKQAAATRELGADERQL 61 Query: 64 LRPMLRLILDNESKVKQLLQIRMDELAKLVG 94 +++ IL N+++V+ L + +++L +L+ Sbjct: 62 KTRIMKRILVNDAEVRTLAEPWLEDLDQLLA 92 >UniRef50_B1Y381 Flagellar chaperone n=9 Tax=cellular organisms RepID=B1Y381_LEPCP Length = 114 Score = 91.2 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 41/96 (42%) Query: 4 APHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQ 63 L ++ + S ML A WD ++ E A + ++ H E + + Sbjct: 16 NHALLQYYEAIETASHEMLEAARAGDWDRVVKLEGACAVLISQLKHAATERRLGSEEAQL 75 Query: 64 LRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQ 99 +++ IL N+++++ L + +++L +++ Sbjct: 76 KARIMQRILVNDAEIRHLAEPWLEDLDQMMAGRPRN 111 >UniRef50_C6P5L0 Flagellar export chaperone n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5L0_9PROT Length = 106 Score = 90.4 bits (223), Expect = 1e-17, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 1/100 (1%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP 66 L +Q+L + M A +WD LI+ E V+EI V + + Q Sbjct: 4 LLEDYQRLSGITGEMRNAAASGEWDRLISLEQECKRKVEEIKPRDI-VPSNPEERAQKLA 62 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 +L+ IL +++ ++ + M++L +++ + ++ + Y Sbjct: 63 LLKKILADDADIRSRTESWMEQLQRIMQSTRSEQRLQQTY 102 >UniRef50_Q2NWZ5 Flagellar protein FliT n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NWZ5_SODGM Length = 113 Score = 80.0 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 42/95 (44%) Query: 15 VEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDN 74 ++ S ++ A + WD ++A YV ++E + +T +E + +L N Sbjct: 15 LQLSYQIIAKARLKDWDSVVALNNRYVITLREAIEHIQSAGMATYEEEGRMNDIEQLLKN 74 Query: 75 ESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ 109 E +++ L+ R+ L + +GQ + Y Q Sbjct: 75 EKEIRALIGTRLTTLEQDMGQLRHSSQGNNTYHRQ 109 >UniRef50_D2TYE7 Flagellar biosynthesis protein FliT n=1 Tax=Arsenophonus nasoniae RepID=D2TYE7_9ENTR Length = 97 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 60/96 (62%) Query: 14 LVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILD 73 ++ SQ ML LA QW++L+ SE Y AV+++ L S + QL +L+ IL Sbjct: 1 MLTISQQMLALAQLGQWEQLLVSEKGYQQAVEQVTALGSIAGLSKPLSHQLTELLQAILT 60 Query: 74 NESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ 109 NE+ ++QL++ +M+ELA+L+ Q++ Q+ + S YG+ Sbjct: 61 NENAIRQLMERQMNELAQLIKQTAQQQQLQSRYGEF 96 >UniRef50_A9BQ52 Flagellar protein FliT n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BQ52_DELAS Length = 99 Score = 74.6 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 41/87 (47%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP 66 L ++ + + S ML+ A + W+ + E ++++ + + + +++ Sbjct: 5 LIDFYRAIEDSSAKMLQAAQNKDWEGVTRYEGTCAVLIEQLRLKSHDEPLAPDQRKEKAR 64 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLV 93 +++ IL N+++++ L + + + + Sbjct: 65 IMQRILRNDAQIRTLAEPWLAQFEHMF 91 >UniRef50_C4SBN3 Putative uncharacterized protein n=2 Tax=Yersinia RepID=C4SBN3_YERMO Length = 91 Score = 74.2 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 24 LATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQLLQ 83 +A E +WDE I Y+ + +I + + ++ L ML +L+NE ++ + L+ Sbjct: 1 MAKEGKWDEFIELAEVYIITLHDIIE-NQPAEMMQDEKKNLSVMLTSLLENEDEITKTLK 59 Query: 84 IRMDELAKLVGQSSVQKSVLSAYGDQ 109 R+D L K + K AY Q Sbjct: 60 SRLDVLRKDMSSLQHGKKCSKAYSSQ 85 >UniRef50_Q0AAS8 Flagellar protein FliT n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAS8_ALHEH Length = 111 Score = 70.4 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 3/112 (2%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 + + A +L ++ L LA E+WDEL+ASE + I + + Sbjct: 3 LPRDEAMLEAAIELEHLARRRLELARSERWDELVASETRRGELARAIDPSSVHAP---DL 59 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGF 112 Q+ L LR I D + +++ LL+ R++EL + + + + AY G Sbjct: 60 QQALVTRLRRITDMDDQLRPLLEGRLEELGRTLLDARKGAAGNRAYQRFRGD 111 >UniRef50_C7RSG9 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSG9_9PROT Length = 96 Score = 67.3 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 1/90 (1%) Query: 8 YFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPM 67 A + L+ S+ ML A W+ L E A + T D S +E+ R + Sbjct: 5 LSALEHLLALSEEMLGAAAAGDWETLTEREAARRALAHSLP-ATLTSDLSRASEERARLV 63 Query: 68 LRLILDNESKVKQLLQIRMDELAKLVGQSS 97 + L + ++ L++ R++EL ++ Sbjct: 64 IEACLRCDLSIRPLVEARLNELRVVLRAER 93 >UniRef50_C5CXS0 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CXS0_VARPS Length = 92 Score = 58.8 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Query: 21 MLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQ 80 M LA +WD L E V + + V EQ+R ++ I ++ +V Sbjct: 4 MASLARAREWDRLPELEARCAQLVDRLKAVGA-VSLDAAQLEQVRGLIARIHADQDEVCA 62 Query: 81 LLQIRMDELAKLVGQSSVQKSVLSAYG 107 L++ +++ L + Q + + AYG Sbjct: 63 LVKPQLERLVAKMAQLQNRSDLGKAYG 89 >UniRef50_A1K919 Hypothetical flagellar related protein FliT n=1 Tax=Azoarcus sp. BH72 RepID=A1K919_AZOSB Length = 105 Score = 56.1 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 2/100 (2%) Query: 12 QQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLI 71 ++L+ Q M A WD L ++ A P + L +R I Sbjct: 8 RRLLAIYQAMADAARANDWDRLGELGRQGDELRRQAAASQGTPAPGEEV--DLAATIRRI 65 Query: 72 LDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGG 111 L+ + +++ + + KL+ + ++V +AYG GG Sbjct: 66 LELDGEIRTHAEPAYESTRKLLSGAVQHRNVRNAYGSLGG 105 >UniRef50_B9TCZ8 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TCZ8_RICCO Length = 73 Score = 55.7 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 2/75 (2%) Query: 21 MLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQ 80 M A + L E AV+ S + + +L+ IL N+ +++ Sbjct: 1 MAAAARMGDLNRLGQLEDQC--AVEARGAGNGVAALSGGQRLRKIDLLKQILANDREIRD 58 Query: 81 LLQIRMDELAKLVGQ 95 L M+ + + Q Sbjct: 59 LTDPWMNNIPGMARQ 73 >UniRef50_A4BUD2 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUD2_9GAMM Length = 116 Score = 50.7 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 4/101 (3%) Query: 10 AWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLR 69 A ++L+E ++ ML L W E Q ++ T + +R Sbjct: 19 AARRLLELTREMLDLGHVGDWVLFAQREEER----QALSRTIFATPVPRTAAPLVADCIR 74 Query: 70 LILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQG 110 +LD + ++ L + D+ ++ + + + +AY Sbjct: 75 RVLDLDQELITLAEAHRDQASRAMRDAQRGRQAANAYRRFS 115 >UniRef50_D0FQ37 Conserved uncharacterized protein n=2 Tax=Erwinia pyrifoliae RepID=D0FQ37_ERWPY Length = 112 Score = 50.0 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Query: 7 LYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRP 66 L Q++ + ++ L+ E WDE IA+ + + E L S R Sbjct: 5 LMSELQRISQLHDELMVLSCEGHWDEFIAALDPCADLLHEAMQLDSSA-LSPEELAAARE 63 Query: 67 MLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGD 108 ++ + +NE+ + Q ++ R+D+L + + + K+V +AY Sbjct: 64 LMTTLQNNEALMVQRMRARLDQLREEMSGLNKGKAVSNAYAA 105 >UniRef50_D1C175 Putative uncharacterized protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C175_SPHTD Length = 127 Score = 48.4 bits (114), Expect = 8e-05, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 31/81 (38%) Query: 14 LVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILD 73 ++ ++ A WD + ++ P+ +E++ + I Sbjct: 19 ILALAREQAHAARVGDWDTVNDLAARRDELTANLSAAETLNQPADAARERIAELFSAIKA 78 Query: 74 NESKVKQLLQIRMDELAKLVG 94 ++ +V L++ ++ LA+ + Sbjct: 79 SDDEVTALVRREIERLAREMA 99 >UniRef50_Q47HZ5 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HZ5_DECAR Length = 94 Score = 47.6 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 37/86 (43%), Gaps = 3/86 (3%) Query: 9 FAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPML 68 ++QL++ SQ ML ++W++L++ E + + + ++ Sbjct: 5 NHYRQLLQISQDMLAAGQAQEWEKLVSLEADRSLLLDK---SPAPTAAKGENPQAAVALI 61 Query: 69 RLILDNESKVKQLLQIRMDELAKLVG 94 I ++++++++ ++ L+ Sbjct: 62 HQIQAIDAQLQEIVATWLEHARILLR 87 >UniRef50_A1WUC7 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WUC7_HALHL Length = 115 Score = 47.3 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 5/100 (5%) Query: 12 QQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLI 71 ++L E S+ M R A WD ++ +++ DP+ + R L Sbjct: 21 RRLRELSRQMRRCAEAGDWDGVMERNGLREKQARQL-----PEDPNHPGADLARQALAES 75 Query: 72 LDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGG 111 L+ + V+ ++ D L Q+ AY Sbjct: 76 LECDRAVRAWMEAERDRLGAASRDEHHQREARDAYSRYSD 115 >UniRef50_B9Z882 Putative uncharacterized protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z882_9NEIS Length = 105 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 44/106 (41%), Gaps = 2/106 (1%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M+ L +L ++ ML A+ +W+ ++ +++ + + + Sbjct: 1 MDEDVGLSSQVMKLAHITEAMLAAASNAEWERFTELDIERDAHYRQVILEVDAPALANSP 60 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAY 106 + LR +L ++ +++ LL R EL + ++ Q+ + Y Sbjct: 61 E--LREVLDTVVTQSREIESLLIERCAELQYSLSLTNRQQKLQKIY 104 >UniRef50_B3PGR7 Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PGR7_CELJU Length = 158 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 2 NHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQ 61 + L ++ + +SQ +L LA + W+ + I + Sbjct: 51 MNTDTLLAPLERALSQSQALLSLARADDWESFETLVQQRQQGLLSIQDTEYLQSLAAAEL 110 Query: 62 -EQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGD 108 ++ ++R I ++ L + R +L + Q+ + AYG Sbjct: 111 GQRAAALVREIQTINEQLANLAETRKTKLVSDLRQAGHAAKAIDAYGR 158 >UniRef50_C4KAR4 Flagellar-like protein FliT n=1 Tax=Thauera sp. MZ1T RepID=C4KAR4_THASP Length = 115 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 33/100 (33%), Gaps = 8/100 (8%) Query: 19 QLMLRLATEEQWDELIASEMAYVNAVQEIAHLT--------EEVDPSTTMQEQLRPMLRL 70 + M A W+ L A E + T +LR + Sbjct: 15 EAMAEAARANDWERLSALEREAAALREAARGNTWGAMDDAAALARLPPADAAELREGIAR 74 Query: 71 ILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQG 110 +L +++++ + + KL+ ++++ AYG Sbjct: 75 LLALDAEIRSHTDPFLSSVRKLLSAGRQERALRDAYGASS 114 >UniRef50_UPI00016B2480 DNA gyrase subunit A n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2480 Length = 417 Score = 41.1 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 25/60 (41%) Query: 60 MQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDN 119 L L+ IL +E ++ +++ + E+ + G K + G L P+++ Sbjct: 46 ELLALIEKLKGILADEQEILNIIKNELIEMKEKYGDQRRSKMINHELGKFSDEELIPEED 105 >UniRef50_C5S5H5 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5H5_CHRVI Length = 111 Score = 39.9 bits (92), Expect = 0.022, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 7/97 (7%) Query: 1 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTM 60 M + L LV + M A + WD + + ++ I + Sbjct: 1 MANLTDLIS---DLVAATDQMKPAAQGDDWDMVERLQKRRRVLIESIVERAAHEPITEED 57 Query: 61 QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSS 97 E+LR + R +E+ V L + L + + + Sbjct: 58 AERLRAVRR----HEATVAALAGTQRQALREAIAELQ 90 >UniRef50_Q2BI08 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BI08_9GAMM Length = 103 Score = 39.9 bits (92), Expect = 0.027, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 4/94 (4%) Query: 16 EKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNE 75 ++S+ ML LA EE+WD++ + + + ++A + R + I + Sbjct: 13 QQSEQMLELAREEEWDKVEEIQKQHSTLITDLAS----ANFEENDIHDARKAIENIQKLD 68 Query: 76 SKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQ 109 + + L QIR +++ K Q + A+G Sbjct: 69 QQTEALAQIRKEQIVKEKQQQDKADKMKKAFGAF 102 >UniRef50_A4A602 Putative uncharacterized protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A602_9GAMM Length = 119 Score = 39.5 bits (91), Expect = 0.032, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 3/93 (3%) Query: 12 QQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLI 71 ++ ++ ML A WDE+ E ++ S + E L ML L Sbjct: 21 ADVLSATRTMLEHANAGDWDEVAELERNRRADLELCFSEAVAPQHSELVSEALAVMLHL- 79 Query: 72 LDNESKVKQLLQIRMDELAKLVGQSSVQKSVLS 104 N+ + L R L + + Q+ + ++ S Sbjct: 80 --NDELMGLLASARDSVLEQGISQARTRSALGS 110 >UniRef50_B9ZNY7 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNY7_9GAMM Length = 127 Score = 38.4 bits (88), Expect = 0.079, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 1/102 (0%) Query: 13 QLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLIL 72 + LM + EE WD L ++ V+ A E V E LR L + Sbjct: 18 AVEAVRGLMDQAIREEDWDHLEELDLKARVLVER-AFGDEPVPLRDDTGEALRSALERLS 76 Query: 73 DNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVL 114 + +L R + ++ + + + +AY + + Sbjct: 77 TFYEETVPILAERRGDASRQLRELRAGRKGTNAYENTRRNSM 118 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.307 0.145 0.406 Lambda K H 0.267 0.0449 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 698,298,722 Number of Sequences: 3077464 Number of extensions: 23699809 Number of successful extensions: 171838 Number of sequences better than 1.0e-01: 74 Number of HSP's better than 0.1 without gapping: 110 Number of HSP's successfully gapped in prelim test: 62 Number of HSP's that attempted gapping in prelim test: 171255 Number of HSP's gapped (non-prelim): 506 length of query: 121 length of database: 1,040,396,356 effective HSP length: 88 effective length of query: 33 effective length of database: 769,579,524 effective search space: 25396124292 effective search space used: 25396124292 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 87 (38.0 bits)