310 c3cnyA_ Probab=78.19   E-value=5  Score=19.73  Aligned_columns=196  Identities=14%

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHH
Q ss_conf             32205788789889999999999769989997056676510000000136907999999961289808999625655899
Q batch____        15 DGMHAIRHQYSLENVRQIAKALDDARVDSIEVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLPGIGTIH   94 (337)
Q Consensus        15 DG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (337)
                      |-.+..+..++.+   ++++.+.++|++.||++.              ...+.+.++...+...-...............
T Consensus        21 ~~~~~~~~~~~le---~~l~~~a~~G~~gIEl~~--------------~~~~~~~l~~~l~~~gl~v~~~~~~~~~~~~~   83 (300)
T c3cnyA_          21 DDIPSIGKDNNLQ---QLLSDIVVAGFQGTEVGG--------------FFPGPEKLNYELKLRNLEIAGQWFSSYIIRDG   83 (300)
T ss_dssp             SSSTTTTTTCCHH---HHHHHHHHHTCCEECCCT--------------TCCCHHHHHHHHHHTTCEECEEEEEECHHHHH
T ss_pred             CCCCCCCCCCCHH---HHHHHHHHCCCCEEEECC--------------CCCCHHHHHHHHHHCCCEEEEEECCCCCCHHH
T ss_conf             2123455788989---999999971988899258--------------88998999999997398799983477688135


Q ss_pred             HHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCH----------------------HHHHHHH
Q ss_conf             999999669988999721005999999999999889819999023675898----------------------9999999
Q batch____        95 DLKNAWQAGARVVRVATHCTEADVSAQHIQYARELGMDTVGFLMMSHMTTP----------------------ENLAKQA  152 (337)
Q Consensus        95 ~i~~a~~~g~~~iri~~~~~~~~~~~~~v~~ak~~G~~v~~~~~~~~~~~~----------------------~~~~~~~  152 (337)
                      .                 ....+...+.++.+++.|...............                      +.+.+++
T Consensus        84 ~-----------------~~~~~~~~~~~~~a~~lg~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~l~  146 (300)
T c3cnyA_          84 I-----------------EKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYG  146 (300)
T ss_dssp             H-----------------HHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHH
T ss_pred             H-----------------HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             8-----------------99999999999999970888899817877666665566556544589999999999999999


Q ss_pred             HHHHHCCCCE-EEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCH--HHHHHHHHHHCCCCEEEECCC----
Q ss_conf             9999639988-998387467898999999999998439887899992188541--789999999728878863153----
Q batch____       153 KLMEGYGATC-IYVVDSGGAMNMSDIRDRFRALKAELKPETQTGMHAHHNLSL--GVANSIAAVEEGCDRIDASLA----  225 (337)
Q Consensus       153 ~~~~~~Gad~-i~l~DT~G~~~P~~~~~~v~~l~~~~~~~i~i~~H~Hnd~Gl--a~AN~laA~~aGa~~vd~si~----  225 (337)
                      +.+.+.|+.. +---...-..+|.++.++++.+..   |.+.+-+-+.|-.-.  .+...+..+..-+.+++..=+    
T Consensus       147 ~~a~~~Gv~i~iE~~~~~~~~~~~~~~~ll~~v~~---~~~g~~~D~~h~~~~g~~~~~~~~~~~~~i~~vHikD~~~~~  223 (300)
T c3cnyA_         147 EIAAKYGLKVAYHHHXGTGIQTKEETDRLXANTDP---KLVGLLYDTGHIAVSDGDYXALLNAHIDRVVHVHFKDVRRSK  223 (300)
T ss_dssp             HHHHHTTCEEEEECCTTSSSCSHHHHHHHHHTSCT---TTCEEEEEHHHHHHHHSCSHHHHHHHGGGEEEEEECEECHHH
T ss_pred             HHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCC---CCCEEEECCHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCC
T ss_conf             99997389899814533235888899999986078---555587530134320258899999501100452001477666


Q ss_pred             ---------------------CCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf             ---------------------437888771699999999957898
Q batch____       226 ---------------------GMGAGAGNAPLEVFIAAADKLGWQ  249 (337)
Q Consensus       226 ---------------------GlGeraGN~~~E~lv~~L~~~g~~  249 (337)
                                           ..|+  |..+...++..|...||+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~G~--G~id~~~il~~L~~~gY~  266 (300)
T c3cnyA_         224 EEECRAKGLTFQGSFLNGXFTVPGD--GDLDFKPVYDKLIANNYK  266 (300)
T ss_dssp             HHHHHHHTCCHHHHHHTTCEECTTT--SSCCCHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHCCCC
T ss_conf             5432123454210012466345787--765899999999973998