43 c1vliA_ Probab=97.61   E-value=0.006  Score=38.05  Aligned_columns=194  Identities=15%

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------ECCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC
Q ss_conf             2205788789889999999999769989997-------056676510000000136907999999961289808999625
Q batch____        16 GMHAIRHQYSLENVRQIAKALDDARVDSIEV-------AHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLP   88 (337)
Q Consensus        16 G~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEv-------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (337)
                      ++=..++.=+.+.-+++++...++|.|.|-+       -+........++.--...-..+|.+.+...++...+..+..|
T Consensus        20 AEig~NH~Gdl~~A~~lI~~A~~aGadaVKFQt~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~f~sTp   99 (358)
T c1vliA_          20 AEAGINHDGKLDQAFALIDAAAEAGADAVKFQXFQADRXYQKDPDVSIFSLVQSXEXPAEWILPLLDYCREKQVIFLSTV   99 (358)
T ss_dssp             EEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCCCCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBC
T ss_pred             EECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             76220357878999999999997199789842014210015655630457775316998999999999997598299834


Q ss_pred             CCCCHHHHHHHHHCCCCEEEEEE-EHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE--
Q ss_conf             65589999999966998899972-100599999999999988981999902367589899999999999639988998--
Q batch____        89 GIGTIHDLKNAWQAGARVVRVAT-HCTEADVSAQHIQYARELGMDTVGFLMMSHMTTPENLAKQAKLMEGYGATCIYV--  165 (337)
Q Consensus        89 ~~~~~~~i~~a~~~g~~~iri~~-~~~~~~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~Gad~i~l--  165 (337)
                      -  +.+.++...+.+++.+.|.. .+++    .+.++++-+.|.-|..+   +++++.+++...++.+...|..-+.|  
T Consensus       100 f--d~~svd~l~~~~v~~~KIaS~el~n----~pLL~~~A~~gkPvilS---TGmatl~Ei~~Av~~i~~~g~~~i~llh  170 (358)
T c1vliA_         100 C--DEGSADLLQSTSPSAFKIASYEINH----LPLLKYVARLNRPXIFS---TAGAEISDVHEAWRTIRAEGNNQIAIXH  170 (358)
T ss_dssp             C--SHHHHHHHHTTCCSCEEECGGGTTC----HHHHHHHHTTCSCEEEE---CTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             C--CHHHHHHHHHCCCCEEEECHHHCCC----HHHHHHHHHCCCCEEEE---CCCCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             7--9999999986399869984122798----89999996318971851---3546889999999999967998489995


Q ss_pred             CCCCCCCCHHHHH-HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEE
Q ss_conf             3874678989999-9999999843988789999218854178999999972887886
Q batch____       166 VDSGGAMNMSDIR-DRFRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCDRID  221 (337)
Q Consensus       166 ~DT~G~~~P~~~~-~~v~~l~~~~~~~i~i~~H~Hnd~Gla~AN~laA~~aGa~~vd  221 (337)
                      |-+.==..|+++- ..+..+++.+ +++++|+--|..-+.++.  ++|+..||..|+
T Consensus       171 C~s~YP~p~~~~nL~~i~~L~~~f-~~~~vG~SDHt~g~~~~~--~aAvalGA~vIE  224 (358)
T c1vliA_         171 CVAKYPAPPEYSNLSVIPXLAAAF-PEAVIGFSDHSEHPTEAP--CAAVRLGAKLIE  224 (358)
T ss_dssp             ECSSSSCCGGGCCTTHHHHHHHHS-TTSEEEEEECCSSSSHHH--HHHHHTTCSEEE
T ss_pred             CCCCCCCCHHHCCHHHHHHHHHHC-CCCEECCCCCCCCCCHHH--HHHHHCCCEEEE
T ss_conf             588889886673746789999751-786021477665540356--888630300002