346 c1sjaA_ Probab=72.60   E-value=7  Score=18.82  Aligned_columns=114  Identities=16%

Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHH
Q ss_conf             88789889999999999769989997056676510000000136907999999961289808999625655899999999
Q batch____        21 RHQYSLENVRQIAKALDDARVDSIEVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLPGIGTIHDLKNAW  100 (337)
Q Consensus        21 ~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~  100 (337)
                      +..|+.++.+++.+ |++.++..||              ..-...+.+.++.++....-.   ....-...+..++..+.
T Consensus       191 N~~~~~~~a~~l~~-l~~~~i~~iE--------------eP~~~~d~~~~~~l~~~~~~p---ia~dEs~~~~~~~~~~~  252 (368)
T c1sjaA_         191 NTAYTLGDAPQLAR-LDPFGLLLIE--------------QPLEEEDVLGHAELARRIQTP---ICLDESIVSARAAADAI  252 (368)
T ss_dssp             TTCBCGGGHHHHHT-TGGGCCSCEE--------------CCBCTTCHHHHHHHTTTCSSC---EEESTTCCSHHHHHHHH
T ss_pred             CCCCCHHHHHHHHH-HCCCCCEEEC--------------CCCCCCCHHHHHHHHHHCCCE---EEECCCCCCHHHHHHHH
T ss_conf             88898999999997-3338815811--------------888806788899999874982---98477648999999999


Q ss_pred             HCC-CCEEEEEEEHH-HHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH
Q ss_conf             669-98899972100-59999999999998898199990236758989999999
Q batch____       101 QAG-ARVVRVATHCT-EADVSAQHIQYARELGMDTVGFLMMSHMTTPENLAKQA  152 (337)
Q Consensus       101 ~~g-~~~iri~~~~~-~~~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~  152 (337)
                      +.+ ++.+.+-.... =+..+.+...+|+.+|..+..+.+..+.........++
T Consensus       253 ~~~~~d~i~~k~~~~GGi~~~~~~~~~A~~~gi~~~~~~~~~s~ig~aa~~~la  306 (368)
T c1sjaA_         253 KLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMIETGLGRAANVALA  306 (368)
T ss_dssp             HHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCSCCHHHHHHHHHHH
T ss_pred             HCCCCCEEEECHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf             729997998150004886899999999997398299828786079999999997