406 c1cygA_ Probab=64.05   E-value=10  Score=17.72  Aligned_columns=89  Identities=18%

Q ss_pred             CEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC----------------------------------------
Q ss_conf             8899972100599999999999988981999902367589----------------------------------------
Q batch____       105 RVVRVATHCTEADVSAQHIQYARELGMDTVGFLMMSHMTT----------------------------------------  144 (337)
Q Consensus       105 ~~iri~~~~~~~~~~~~~v~~ak~~G~~v~~~~~~~~~~~----------------------------------------  144 (337)
                      +...+--..-..+..++.|+.++++|++|.+.+..-+..+                                        
T Consensus       100 d~~~id~~~Gt~~dfk~lV~~aH~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (680)
T c1cygA_         100 DFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANMYFHHNGGTTF  179 (680)
T ss_dssp             EEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETTEEEECSTTCTTCCBCCSCBCCC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             24335633289999999999999889889999962336887754320001573454653046788765665336688755


Q ss_pred             ------------------------HHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             ------------------------899999999999639988998387467898999999999998439887899
Q batch____       145 ------------------------PENLAKQAKLMEGYGATCIYVVDSGGAMNMSDIRDRFRALKAELKPETQTG  195 (337)
Q Consensus       145 ------------------------~~~~~~~~~~~~~~Gad~i~l~DT~G~~~P~~~~~~v~~l~~~~~~~i~i~  195 (337)
                                              .+++.+.++.+.+.|+|-|++ |.+..+.+....++...+++. .+...++
T Consensus       180 ~~~~~~~~~~~~~~~dln~~n~~v~~~~~~~~~~w~~~giDGfR~-D~~~~~~~~~~~~~~~~~~~~-~~~~~~~  252 (680)
T c1cygA_         180 SSLEDGIYRNLFDLADLNHQNPVIDRYLKDAVKMWIDMGIDGIRM-DAVKHMPFGWQKSLMDEIDNY-RPVFTFG  252 (680)
T ss_dssp             SSHHHHHSSBSTTEEEBCTTSHHHHHHHHHHHHHHHTTTCCEEEE-SCGGGSCSHHHHHHHHHHHHH-CCCEEEE
T ss_pred             CCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE-CCCCCCCHHHHHHHHHHHHHH-CCEEEEE
T ss_conf             665631005778888546899999999999999998445883776-141038998999999998621-8808999