26 c3polA_ Probab=84.76   E-value=2.3  Score=20.21  Aligned_columns=218  Identities=16%

Q ss_pred             CCCCCCCCCEEEEEECCCCH--------------HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf             89977798259998369916--------------9899999999827998389997684593269999997321895899
Q batch____        23 RKPSQKKGCIDAIIPAYNEG--------------PCLAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFV   88 (398)
Q Consensus        23 ~~p~~~~p~VsIiIP~~Ne~--------------~~i~~~l~sl~~q~yp~eIIvvdD~StD~t~~i~~~~~~~~~~~~~   88 (398)
                      +...+...+..|||||....              +.|..+++++.+.....+|+|+-+.      +........+.....
T Consensus         2 ~~~~~~~~~~~vIi~A~~~s~Rl~~K~Ll~v~Gkpli~~~i~~l~~~~~~~~iiVv~~~------~~~~~~~~~~~~~~~   75 (262)
T c3polA_           2 HIDDDDKHMKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDD------ERIAEICRAEGVDVV   75 (262)
T ss_dssp             CSSCTTCCCEEEEEECCSCCTTSTTGGGSEETTEEHHHHHHHHHTTCCSCSEEEEEESC------HHHHHHHHTTTCEEE
T ss_pred             CCCCHHCCCEEEEEECCCCCCCCCCCEEEEECCEEHHHHHHHHHHHCCCCCEEEEECCH------HHHHHHHHHCCCCEE
T ss_conf             86700088759999448778899871144368565799999999848998289997695------888999975399499


Q ss_pred             EECCCCCCHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             97587652125887345530---022465545575456781068999885228995799964245676420010001100
Q batch____        89 AVTQKNTGKGGALMNGLNYA---TCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVK  165 (398)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  165 (398)
                      ...+............+...   ..+...+...|.....+.............+...+........+.............
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~d~p~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (262)
T c3polA_          76 LTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVV  155 (262)
T ss_dssp             ECCSCCCCHHHHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEE
T ss_pred             EECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCCCEEEE
T ss_conf             96488765126899999850046898899982895333599999999999976993575644540487670677712899


Q ss_pred             CCCCCCC--------------CHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHHCCCCEEEEC
Q ss_conf             2100000--------------001120379715414647999999997348875444441689--999985798250002
Q batch____       166 LPMIVMK--------------RTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDL--TWTLVANGYRIRQAN  229 (398)
Q Consensus       166 ~~~~~~~--------------~~~~~~~~~~~~~~~g~~~~~r~~~~~~~g~~~~~~~eD~dl--~~rl~~~G~~v~~~p  229 (398)
                      .......              ...............++...++...++...-......|+.+.  .+++...|.++...+
T Consensus       156 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~~~~~~l~~i~~g~~v~~~~  235 (262)
T c3polA_         156 MSKQNEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAV  235 (262)
T ss_dssp             ECSSSBEEEEESSCCSCCSSSSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCCHHHHHHTCTTHHHHHTTCCEEEEE
T ss_pred             ECCCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             86899587730234422222101232201210121112133229999987604876201344577899996898069998


Q ss_pred             CCEEECCCCCCHHHHHH
Q ss_conf             21250225159899987
Q batch____       230 RCIVYPQECNSPREEWR  246 (398)
Q Consensus       230 ~a~v~~~~~~s~~~~~~  246 (398)
                      -..-.-..-.|..++-+
T Consensus       236 ~~~~~~~dIdtpeDL~~  252 (262)
T c3polA_         236 AEANLPPGVDTQADLDR  252 (262)
T ss_dssp             CSSCCCCCCCSHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHH
T ss_conf             16202006889999999