 |
| Job Description | Q9S4W2 | | Confidence | 78.84% | Date | Thu Jan 5 12:38:17 GMT 2012 |
| Rank | 94 | Aligned Residues | 38 |
| % Identity | 11% | Template | c2gqqB_ |
| PDB info |
PDB header:transcription | Chain: B: PDB Molecule:leucine-responsive regulatory protein; |
PDBTitle: crystal structure of e. coli leucine-responsive regulatory protein2 (lrp)
|
| Resolution | 3.20 Å |
|
|   |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | |
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | H | P | A | E | Q | I | A | G | F | R | A | M | A | Q | E | G | K | . |
T | P | A | Q | I | G | D | L | L | G | Y | S | P | R | H | V | Q | R | M | L | K |
| Query Conservation |   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   | . |   |   |   |
|
|
|   |   |   |
|   |
|   |   |   |
|   |   |
|
|   |
| Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|   | . |   |
|
|   |   |
|   |   |
|   |
|   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |
|
|   |   |
|
|   |
| Template Sequence |   |
L | D | R | I | D | R | . |
N | I | L | N | E | L | Q | K | D | G | R | I | S | N | V | E | L | S | K | R | V | G | L | S | P | T | P | C | L | E | R | V | R |
| Template Known Secondary structure |   |
|
| S | T |  |  | . |  |  |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  | S | S | S |
| T | T | T | T | T | T |  |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
12 | . | . | . | . | . | |
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|