40 c1v4sA_ Probab=99.64   E-value=2e-10  Score=83.85  Aligned_columns=328  Identities=15%

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHC---------------CCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCEEEE
Q ss_conf             899988589989999999999978---------------98899147888998763178997896389999973997999
Q batch____        31 STLARLAQISIPAVSNILQELESE---------------KRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIEC   95 (397)
Q Consensus        31 ~ela~~~~Ls~~Tvs~i~~~L~~~---------------gli~e~~~~~~~~GR~~~~l~~n~~~~~~igIdig~~~~~~   95 (397)
                      .++.+...++..++..+.+.+.++               ..+-.--..-+++          .+.+-+++||+|||..|+
T Consensus         4 ~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~ssl~Mlps~v~~lPtG----------~E~G~~LAiDlGGTNlRv   73 (448)
T c1v4sA_           4 EQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEG----------SEVGDFLSLDLGGTNFRV   73 (448)
T ss_dssp             HHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESCCCC----------CCCEEEEEEEESSSEEEE
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCC----------CEEEEEEEEEECCCEEEE
T ss_conf             8888671899899999999999999987530378888413315648876588----------621379999706880799


Q ss_pred             EEECCCC-------CEEEEEEEECCCCC---CHHHHHHHHHHHHHHHHCCCC--CCCCEEEEEECEEEEC---CCEEEEE
Q ss_conf             9985999-------68899998378889---989999999999999842254--5541689980102425---8728985
Q batch____        96 QVANACL-------SPKGEFEYLQIDAP---TPQALLSEIEKCWHRHRKLWP--DHTINLALAIHGQVDP---VTGVSQT  160 (397)
Q Consensus        96 ~l~d~~g-------~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~--~~i~~igi~~~G~v~~---~~g~i~~  160 (397)
                      +++++.+       ....+..++.+...   +.+++++.|.+++.+......  .+-.-+|+...-|+.+   ..+.++.
T Consensus        74 ~~v~L~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~lFd~iA~~i~~fl~~~~~~~~~lplGfTFSFP~~Q~sl~~g~Li~  153 (448)
T c1v4sA_          74 MLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLN  153 (448)
T ss_dssp             EEEEECCCSSSCCEEEEEEEEEECCSTTTSSBHHHHHHHHHHHHHHHHHTTTCTTCCCEEEEEECSCEEEEETTEEEECC
T ss_pred             EEEECCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCEEEEE
T ss_conf             99981788887414787611332898774288789999999999999851366656300246765004531668638996


Q ss_pred             CC---CCCCCCCCCHHHHHHHHHCCC-------EEEECHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCC
Q ss_conf             57---654215998899999870997-------99734288999999862888898689999669820237850332137
Q batch____       161 MP---QAPWTTPVEVKYLLEEKLGIR-------VMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRG  230 (397)
Q Consensus       161 ~~---~~~~~~~~~l~~~l~~~~~~p-------v~i~ND~~a~a~ae~~~g~~~~~~~~~i~~g~Gig~~~i~~g~~~~g  230 (397)
                      ..   ..++..+-|+.+.+++.+...       +.+.||..+..++-.+.   .++..+-+.+|||..++.+..-.-...
T Consensus       154 wtKGF~~~~v~G~dv~~lL~~al~r~~~~~v~v~aivNDTVgTL~s~ay~---~~~~~iGlIlGTG~Nacy~e~~~~i~k  230 (448)
T c1v4sA_         154 WTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYE---DHQCEVGMIVGTGCNACYMEEMQNVEL  230 (448)
T ss_dssp             CCTTCCCBTCTTSBHHHHHHHHHTTTCSCCCEEEEEECHHHHHHHHHHTT---CTTEEEEEEESSSEEEEEEEEGGGCTT
T ss_pred             ECCCEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHCCC---CCCEEEEEEECCCCCEEEEEEHHHCCC
T ss_conf             03663238722322899999999862899827999974518988862457---887489999706834246611445755


Q ss_pred             CCCCCCCCCCEEECCCCCCCCCCCCCC--------------------------HHHHHCHHHHHHHHHHHHCCC------
Q ss_conf             985434455415669984368899771--------------------------343328799999999742023------
Q batch____       231 SLYGSGQIGHTIVNPDGVVCDCGRYGC--------------------------LETVASLSALKKQARVWLKSQ------  278 (397)
Q Consensus       231 ~~g~ageiGh~~v~~~~~~c~cG~~gc--------------------------le~~~s~~al~~~~~~~~~~~------  278 (397)
                      ..+..++.=        ..|+||..|.                          +|.++|+..|-+.++......      
T Consensus       231 ~~~~~~~mi--------INtEwG~fg~~~~l~~~~T~~D~~lD~~s~~pg~q~fEkmiSG~YLGElvRlvl~~l~~~~~l  302 (448)
T c1v4sA_         231 VEGDEGRMC--------VNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLL  302 (448)
T ss_dssp             SSCCSSEEE--------EECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCHHHHHHCTTTHHHHHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEE--------EECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             168887189--------982775689878755668867788765168878761457764102899999999999741364


Q ss_pred             ----CCCCCCCCCCCCHHHHHHHHHCCCH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             ----4322356446999999998986998-------------------------99999999999999999999998789
Q batch____       279 ----PVSTQLDPEKLTTAQLIAAWQSGEP-------------------------WITSWVDRSANAIGLSLYNFLNILNI  329 (397)
Q Consensus       279 ----~~~~~~~~~~~~~~~i~~~~~~gd~-------------------------~a~~il~~~~~~l~~~i~nl~~~l~p  329 (397)
                          .......+..++.+.+.+......+                         .++.+..++|...|.+++.++...+.
T Consensus       303 f~~~~~~~L~~~~~l~t~~ls~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~ir~i~~~v~~RaA~l~Aa~i~ail~~~~~  382 (448)
T c1v4sA_         303 FHGEASEQLRTRGAFETRFVSQVESDTGDRKQIYNILSTLGLRPSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRE  382 (448)
T ss_dssp             GGGCCCTGGGSTTCSCHHHHHHHTTCCSSSHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             56558545424776552678886528883378998887558999988999999999999999999999999999985043


Q ss_pred             C--------EEEECCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
Q ss_conf             9--------79993856523468899999999975300002433338658983126748998899999
Q batch____       330 N--------QIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLY  389 (397)
Q Consensus       330 ~--------~IVlgG~i~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~i~~s~l~~~~~~~GAA~l~  389 (397)
                      .        .|.+.|++.+..+.|.+.+.+.+....-...       +.+..+   ++.+.+|||++|
T Consensus       383 ~~~~~~~~i~V~~dGSv~~~~p~y~~~~~~~l~~l~~~~~-------i~l~~~---~dgSg~GAAi~A  440 (448)
T c1v4sA_         383 SRSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPSCE-------ITFIES---EEGSGRGAALVS  440 (448)
T ss_dssp             TCCSSSEEEEEEEECHHHHHSTTHHHHHHHHHHHHCTTEE-------EEEEEC---SSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHHCCCCC-------EEEEEE---CCCCHHHHHHHH
T ss_conf             3466776279999970001182479999999998527882-------799982---488668899999


