07/01/2012 01:22:05 : INFO  : Run start: Sat Jan  7 01:22:05 GMT 2012
07/01/2012 01:22:06 : INFO  : Initialised job
07/01/2012 01:22:06 : INFO  : Renaming log file 'phyre2_20120107_012205.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/47924f594f63bc83/phyre_20120107_012205.log'
07/01/2012 01:22:07 : INFO  : Initialised job:
Sequence
>batch____
MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIW
ASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLI
PALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEV
TPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMAN
SAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKA
AFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKG
DGFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIV
TADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQ
VEMAKFQSIF

07/01/2012 01:22:08 : INFO  : Checked sequence
07/01/2012 01:22:09 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 01:22:09 : INFO  : PSI-BLAST 3 iterations
07/01/2012 01:25:31 : INFO  : PSI-BLAST 5 iterations
07/01/2012 01:29:09 : INFO  : Finished PSI-BLAST
07/01/2012 01:29:10 : INFO  : Running Buildali to generate a3m file
07/01/2012 02:07:15 : INFO  : Converting to HMM
07/01/2012 02:07:22 : INFO  : Calibrating HMM
07/01/2012 02:07:37 : INFO  : Searching HMM database
07/01/2012 02:16:10 : INFO  : Finished buildali
07/01/2012 02:16:11 : INFO  : Predicting secondary structure
07/01/2012 02:16:19 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 02:16:20 : INFO  : Predicting Disordered regions
07/01/2012 02:16:22 : INFO  : Predicted Disorder (Disopred)
07/01/2012 02:16:23 : INFO  : Running memsat_svm check
07/01/2012 02:19:32 : INFO  : Running memsat_svm full
07/01/2012 02:24:56 : INFO  : Predicted Transmembrane (memsat_svm) ID '47924f594f63bc83'
07/01/2012 02:24:57 : INFO  : Initialising fold library search
07/01/2012 02:25:00 : INFO  : Initialised search input
07/01/2012 02:25:02 : INFO  : Building Ensemble models
07/01/2012 02:25:05 : INFO  : Building hh.c2ve5H_.model.1.pdb
07/01/2012 02:25:18 : INFO  : Building c2ve5H_.1.pdb
07/01/2012 02:25:30 : INFO  : Building d1bxsa_.2.pdb
07/01/2012 02:25:42 : INFO  : Building d1a4sa_.3.pdb
07/01/2012 02:25:56 : INFO  : Building c3ed6B_.4.pdb
07/01/2012 02:26:08 : INFO  : Building d1o9ja_.5.pdb
07/01/2012 02:26:20 : INFO  : Building d1o04a_.6.pdb
07/01/2012 02:26:33 : INFO  : Building d1ag8a_.7.pdb
07/01/2012 02:26:45 : INFO  : Building c2o2qA_.8.pdb
07/01/2012 02:26:58 : INFO  : Building c2d4eB_.9.pdb
07/01/2012 02:27:10 : INFO  : Building c3r31A_.10.pdb
07/01/2012 02:27:21 : INFO  : Building c3iwkB_.11.pdb
07/01/2012 02:27:33 : INFO  : Building c3rh9A_.12.pdb
07/01/2012 02:27:44 : INFO  : Building c3i44A_.13.pdb
07/01/2012 02:27:56 : INFO  : Building c3k2wD_.14.pdb
07/01/2012 02:28:07 : INFO  : Building c2jg7G_.15.pdb
07/01/2012 02:28:19 : INFO  : Building c3b4wA_.16.pdb
07/01/2012 02:28:31 : INFO  : Building d1wnda_.17.pdb
07/01/2012 02:28:42 : INFO  : Building c3ifgH_.18.pdb
07/01/2012 02:28:55 : INFO  : Building c3ek1C_.19.pdb
07/01/2012 02:29:09 : INFO  : Building c3qanB_.20.pdb
07/01/2012 02:29:37 : INFO  : Finished HH model building
07/01/2012 02:29:39 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
07/01/2012 02:30:27 : INFO  : html domain output complete ID '47924f594f63bc83'
07/01/2012 04:30:59 : INFO  : Run end  : Sat Jan  7 04:30:58 GMT 2012
