12/01/2012 05:20:20 : INFO  : Run start: Thu Jan 12 05:20:19 GMT 2012
12/01/2012 05:20:21 : INFO  : Initialised job
12/01/2012 05:20:22 : INFO  : Renaming log file 'phyre2_20120112_052019.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/phyre_20120112_052019.log'
12/01/2012 05:20:22 : INFO  : Initialised job:
Sequence
>batch____
MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIK
VTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTW
DAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEP
YFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAE
AAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKE
LAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIP
QMSAFWYAVRTAVINAASGRQTVDEALKDAQTRITK

12/01/2012 05:20:23 : INFO  : Checked sequence
12/01/2012 05:20:24 : INFO  : Finding homologues with PSI-BLAST
12/01/2012 05:20:24 : INFO  : PSI-BLAST 3 iterations
12/01/2012 05:22:24 : INFO  : PSI-BLAST 5 iterations
12/01/2012 05:25:53 : INFO  : Finished PSI-BLAST
12/01/2012 05:25:54 : INFO  : Running Buildali to generate a3m file
12/01/2012 06:36:47 : INFO  : Converting to HMM
12/01/2012 06:37:15 : INFO  : Calibrating HMM
12/01/2012 06:37:29 : INFO  : Searching HMM database
12/01/2012 06:46:18 : INFO  : Finished buildali
12/01/2012 06:46:19 : INFO  : Predicting secondary structure
12/01/2012 06:46:22 : INFO  : Predicted secondary structure (PSI-Pred)
12/01/2012 06:46:22 : INFO  : Predicting Disordered regions
12/01/2012 06:46:24 : INFO  : Predicted Disorder (Disopred)
12/01/2012 06:46:24 : INFO  : Running memsat_svm check
12/01/2012 06:49:16 : INFO  : Globular protein
12/01/2012 06:49:17 : INFO  : Predicted Transmembrane (memsat_svm) ID '475e35ab46ea6d02'
12/01/2012 06:49:17 : INFO  : Initialising fold library search
12/01/2012 06:49:18 : INFO  : Initialised search input
12/01/2012 06:49:19 : INFO  : Building Ensemble models
12/01/2012 06:49:20 : INFO  : Building hh.c3osqA_.model.1.pdb
12/01/2012 06:49:26 : INFO  : Building hh.c3h4zC_.model.2.pdb
12/01/2012 06:49:30 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/hh.c3h4zC_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/c3h4zC_.2.pdb
12/01/2012 06:49:32 : INFO  : Building hh.c3f5fA_.model.3.pdb
12/01/2012 06:49:36 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/hh.c3f5fA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/c3f5fA_.3.pdb
12/01/2012 06:49:37 : INFO  : Building hh.c3ob4A_.model.4.pdb
12/01/2012 06:49:42 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/hh.c3ob4A_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/c3ob4A_.4.pdb
12/01/2012 06:49:43 : INFO  : Building hh.c1hsjA_.model.5.pdb
12/01/2012 06:49:48 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/hh.c1hsjA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/c1hsjA_.5.pdb
12/01/2012 06:49:49 : INFO  : Building hh.c3c4mA_.model.6.pdb
12/01/2012 06:49:53 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/hh.c3c4mA_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/475e35ab46ea6d02/c3c4mA_.6.pdb
12/01/2012 06:49:55 : INFO  : Building c3osqA_.1.pdb
12/01/2012 06:50:00 : INFO  : Building c3h4zC_.2.pdb
12/01/2012 06:50:05 : INFO  : Building c3f5fA_.3.pdb
12/01/2012 06:50:10 : INFO  : Building c3ob4A_.4.pdb
12/01/2012 06:50:16 : INFO  : Building c1hsjA_.5.pdb
12/01/2012 06:50:23 : INFO  : Building c3c4mA_.6.pdb
12/01/2012 06:50:28 : INFO  : Building c3oaiB_.7.pdb
12/01/2012 06:50:34 : INFO  : Building c1r6zA_.8.pdb
12/01/2012 06:50:41 : INFO  : Building c3dm0A_.9.pdb
12/01/2012 06:50:47 : INFO  : Building c3mp6A_.10.pdb
12/01/2012 06:50:52 : INFO  : Building c3py7A_.11.pdb
12/01/2012 06:50:57 : INFO  : Building c3d4cA_.12.pdb
12/01/2012 06:51:02 : INFO  : Building c3csgA_.13.pdb
12/01/2012 06:51:07 : INFO  : Building c3o3uN_.14.pdb
12/01/2012 06:51:11 : INFO  : Building c1y4cA_.15.pdb
12/01/2012 06:51:16 : INFO  : Building c2vgqA_.16.pdb
12/01/2012 06:51:21 : INFO  : Building c2nvuB_.17.pdb
12/01/2012 06:51:26 : INFO  : Building c1mg1A_.18.pdb
12/01/2012 06:51:31 : INFO  : Building c3ehuA_.19.pdb
12/01/2012 06:51:36 : INFO  : Building c3iouB_.20.pdb
12/01/2012 06:52:26 : INFO  : Finished HH model building
12/01/2012 06:52:27 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
12/01/2012 06:53:12 : INFO  : html domain output complete ID '475e35ab46ea6d02'
12/01/2012 06:58:05 : INFO  : Run end  : Thu Jan 12 06:58:05 GMT 2012
