12 c1vciA_ Probab=100.00  E-value=0  Score=359.45  Aligned_columns=287  Identities=18%

Q ss_pred             CCEEEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHCC
Q ss_conf             95499931799848888764341357889889998799988889999984687276216998478810199889886524
Q batch____         1 MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSQFSHITRLSFEQLQKLVS   80 (490)
Q Consensus         1 M~~l~v~~l~~~~~~~~~L~~isl~i~~Ge~~~liG~nGsGKSTll~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~   80 (490)
                      |+.|+++|++++|++.++|+++||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...  ..++
T Consensus         4 M~~i~~~~l~~~y~~~~~L~~isl~i~~Ge~~~l~G~nGsGKsTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~--~~~~   81 (353)
T c1vciA_           4 MVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKD--RNIS   81 (353)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGG--TTEE
T ss_pred             EEEEEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHH--CEEE
T ss_conf             10899941899848889863232468899789998799988889999996687476007998888874578323--0220


Q ss_pred             EEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             22034201110268888876665304567888999999999758801028865888999999999898886399599970
Q batch____        81 DEWQRNNTDMLGPGEDDTGRTTAEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILD  160 (490)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~ia~al~~~p~iliLD  160 (490)
                      ++++.....        .................+..+.++.+++....++++.+||||||||++||+||+.+|++||||
T Consensus        82 ~~~~~~~~~--------~n~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~iaral~~~p~llllD  153 (353)
T c1vciA_          82 MVFQHMTVY--------ENIAFPLKKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMD  153 (353)
T ss_dssp             EECCCCCHH--------HHHHTTCCCCCHHHHHHHHHHHHHHTTCGGGTTCCGGGCCSSCHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCCCEEE--------ECCCCCCHHHHHHHCCHHHHHHHHHCCCCEEECCCCEECCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf             233320000--------012112100001100002578763138510110252035766157688889850786599995


Q ss_pred             CCCCCCCHHHHHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHCCEEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             830238989999999999987-5238659999574034156214679913887999733778444200012222222222
Q batch____       161 EPFDGLDVASRQQLAERLASL-HQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSEQLEG  239 (490)
Q Consensus       161 EPt~~LD~~~~~~l~~~l~~l-~~~g~tvi~vsH~~~~i~~~~d~i~vl~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (490)
                      |||++||+..+.++++.|+++ ++.|+|+|++||+++++..+||++++|++|++++.|+++++++++........-....
T Consensus       154 EP~s~LD~~~~~~~~~~l~~~~~~~g~tvi~vtH~~~~~~~~~drv~vl~~G~i~~~g~~~ei~~~p~~~~~a~~~g~~~  233 (353)
T c1vciA_         154 EPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGAPE  233 (353)
T ss_dssp             STTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSCSBHHHHHHSSSSC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHCCCCC
T ss_conf             61019888999999999999999739824677305788886448899910475725459889973789822787508877


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCEEECCCCCCCCCCCCHHHHHHHCCCCHHHH
Q ss_conf             222222233333333353105998224897097530156862112210112210048765678
Q batch____       240 VQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKSTL  302 (490)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~is~~i~~Gei~~i~G~nGaGKsTL  302 (490)
                      .....................+...    .......-..+.+.+++ |.+.+.+.++.++.++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~IRP-E~i~l~~~~~~~~~~l  291 (353)
T c1vciA_         234 MNILEVSVGDGYLEGRGFRIELPQM----DLLKDYVGKTVLFGIRP-EHMTVEGVHMKRTARL  291 (353)
T ss_dssp             CEEEEEEECSSEEEETTEEEECCCC----CTTGGGBTSEEEEEECG-GGEEESCCCCSSEEEE
T ss_pred             CCEEEEEEECCEEEECCEEEECCCC----CCCCCCCCCEEEEEECC-CCEEECCCCCCCCCEE
T ss_conf             5246589607738534318880355----55666799759999940-0159812787776349