BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (134 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B7M9S5 UPF0412 protein yaaI n=95 Tax=Enterobacteriaceae... 263 9e-70 UniRef50_B2U231 Putative uncharacterized protein n=1 Tax=Shigell... 130 9e-30 UniRef50_D0I9V6 Putative uncharacterized protein n=1 Tax=Grimont... 50 3e-05 UniRef50_B8HV24 Putative uncharacterized protein n=1 Tax=Cyanoth... 48 9e-05 UniRef50_Q2C6W3 Putative uncharacterized protein n=2 Tax=Photoba... 46 4e-04 >UniRef50_B7M9S5 UPF0412 protein yaaI n=95 Tax=Enterobacteriaceae RepID=YAAI_ECO45 Length = 134 Score = 263 bits (673), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 127/134 (94%), Positives = 130/134 (97%) Query: 1 MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSAD 60 MKSV TISASLAISLMLCCTAQANDHK+LG IAMPRNETNDLALKLPVCRIVKRIQLSAD Sbjct: 1 MKSVITISASLAISLMLCCTAQANDHKILGVIAMPRNETNDLALKLPVCRIVKRIQLSAD 60 Query: 61 HGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTV 120 HGDLQLSGAS+YFKA RSASQ+LNIPSEIKE QTTDWININSDNDNKRCVSKITFSGHTV Sbjct: 61 HGDLQLSGASIYFKATRSASQTLNIPSEIKEEQTTDWININSDNDNKRCVSKITFSGHTV 120 Query: 121 NSSDMATLKIIGDD 134 NSSDMATLKIIGDD Sbjct: 121 NSSDMATLKIIGDD 134 >UniRef50_B2U231 Putative uncharacterized protein n=1 Tax=Shigella boydii CDC 3083-94 RepID=B2U231_SHIB3 Length = 68 Score = 130 bits (328), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 61/62 (98%), Positives = 61/62 (98%) Query: 16 MLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKA 75 MLCCTAQANDHKLLG IAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKA Sbjct: 1 MLCCTAQANDHKLLGVIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKA 60 Query: 76 AR 77 AR Sbjct: 61 AR 62 >UniRef50_D0I9V6 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9V6_VIBHO Length = 127 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 11/133 (8%) Query: 1 MKSVFTISASLAISLMLCCT-AQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSA 59 MKS F + LA+S T A+A+D LG + +N + L VCR V I++ A Sbjct: 3 MKSWFFL-VCLALSFFGASTLARADDEITLGRTIVFKNTDYGAPIPLLVCRRVDAIKVKA 61 Query: 60 DHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHT 119 D D+ L FK +++ IKE TT W + KRCV K+ G + Sbjct: 62 DR-DMYLRKVVATFKNG--ETKTFRFYRNIKEDGTTRWREL----PYKRCVKKLEVYGES 114 Query: 120 VNSSDMATLKIIG 132 NSS A +++ G Sbjct: 115 KNSS--AGVRVYG 125 >UniRef50_B8HV24 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV24_CYAP4 Length = 264 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 15/131 (11%) Query: 12 AISLMLC-CTAQANDHK-----LLGAIAMPRNETNDLALKLPVCRIVKR---IQLSADHG 62 A +L+ C C A A K +LG + +E LKL C R ++L A G Sbjct: 12 AAALLSCLCLAAAGKAKAEQVVVLGQTTLAYSENESYMLKLANCDRQPRYTAVKLQALRG 71 Query: 63 DLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNS 122 + L ++ + L I + +G T WI + NKRC+S+IT G T NS Sbjct: 72 NADLKQVTLVY--GNGEVDRLPIVKRLNQGNETGWIAVQG---NKRCISRITIVGDTSNS 126 Query: 123 S-DMATLKIIG 132 S + A LK++G Sbjct: 127 SANRALLKVLG 137 >UniRef50_Q2C6W3 Putative uncharacterized protein n=2 Tax=Photobacterium RepID=Q2C6W3_9GAMM Length = 125 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 9/132 (6%) Query: 1 MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSAD 60 MK T++A++ +S M T + D LG + + + + +P+CR K IQ+ A+ Sbjct: 1 MKLKATMAATIMLSSMAFSTTASADTFTLGRTILLEAKNSHAKIPVPLCRNTKSIQIKAE 60 Query: 61 HGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTV 120 D+ L+ V FK +S+ ++ + + TDW + + RCV+ I G Sbjct: 61 R-DVFLT--KVVFKFQNGSSRVFQFQRKLDKNEKTDWRRFSYE----RCVTDIQVHGRAE 113 Query: 121 NSSDMATLKIIG 132 + S A +K++G Sbjct: 114 DGS--AGIKVLG 123 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7M9S5 UPF0412 protein yaaI n=95 Tax=Enterobacteriaceae... 193 1e-48 UniRef50_D0I9V6 Putative uncharacterized protein n=1 Tax=Grimont... 148 6e-35 UniRef50_Q2C6W3 Putative uncharacterized protein n=2 Tax=Photoba... 143 2e-33 UniRef50_B8HV24 Putative uncharacterized protein n=1 Tax=Cyanoth... 126 3e-28 UniRef50_B2U231 Putative uncharacterized protein n=1 Tax=Shigell... 99 4e-20 Sequences not found previously or not previously below threshold: UniRef50_B1KEX4 Putative uncharacterized protein n=6 Tax=Gammapr... 99 5e-20 UniRef50_D0Z2P1 Putative uncharacterized protein n=1 Tax=Photoba... 98 7e-20 UniRef50_A4SJI8 Putative uncharacterized protein n=1 Tax=Aeromon... 78 8e-14 UniRef50_A0KSE5 Putative uncharacterized protein n=3 Tax=Shewane... 73 2e-12 >UniRef50_B7M9S5 UPF0412 protein yaaI n=95 Tax=Enterobacteriaceae RepID=YAAI_ECO45 Length = 134 Score = 193 bits (490), Expect = 1e-48, Method: Composition-based stats. Identities = 127/134 (94%), Positives = 130/134 (97%) Query: 1 MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSAD 60 MKSV TISASLAISLMLCCTAQANDHK+LG IAMPRNETNDLALKLPVCRIVKRIQLSAD Sbjct: 1 MKSVITISASLAISLMLCCTAQANDHKILGVIAMPRNETNDLALKLPVCRIVKRIQLSAD 60 Query: 61 HGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTV 120 HGDLQLSGAS+YFKA RSASQ+LNIPSEIKE QTTDWININSDNDNKRCVSKITFSGHTV Sbjct: 61 HGDLQLSGASIYFKATRSASQTLNIPSEIKEEQTTDWININSDNDNKRCVSKITFSGHTV 120 Query: 121 NSSDMATLKIIGDD 134 NSSDMATLKIIGDD Sbjct: 121 NSSDMATLKIIGDD 134 >UniRef50_D0I9V6 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9V6_VIBHO Length = 127 Score = 148 bits (373), Expect = 6e-35, Method: Composition-based stats. Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 11/133 (8%) Query: 1 MKSVFTISASLAISLMLCCT-AQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSA 59 MKS F + LA+S T A+A+D LG + +N + L VCR V I++ A Sbjct: 3 MKSWFFL-VCLALSFFGASTLARADDEITLGRTIVFKNTDYGAPIPLLVCRRVDAIKVKA 61 Query: 60 DHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHT 119 D D+ L FK +++ IKE TT W + KRCV K+ G + Sbjct: 62 DR-DMYLRKVVATFK--NGETKTFRFYRNIKEDGTTRWREL----PYKRCVKKLEVYGES 114 Query: 120 VNSSDMATLKIIG 132 NSS A +++ G Sbjct: 115 KNSS--AGVRVYG 125 >UniRef50_Q2C6W3 Putative uncharacterized protein n=2 Tax=Photobacterium RepID=Q2C6W3_9GAMM Length = 125 Score = 143 bits (359), Expect = 2e-33, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 9/132 (6%) Query: 1 MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSAD 60 MK T++A++ +S M T + D LG + + + + +P+CR K IQ+ A+ Sbjct: 1 MKLKATMAATIMLSSMAFSTTASADTFTLGRTILLEAKNSHAKIPVPLCRNTKSIQIKAE 60 Query: 61 HGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTV 120 D+ L+ V FK +S+ ++ + + TDW + + RCV+ I G Sbjct: 61 R-DVFLTK--VVFKFQNGSSRVFQFQRKLDKNEKTDWRRFSYE----RCVTDIQVHGRAE 113 Query: 121 NSSDMATLKIIG 132 + S A +K++G Sbjct: 114 DGS--AGIKVLG 123 >UniRef50_B8HV24 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV24_CYAP4 Length = 264 Score = 126 bits (315), Expect = 3e-28, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 15/131 (11%) Query: 12 AISLMLC-CTAQANDHK-----LLGAIAMPRNETNDLALKLPVCRIVKR---IQLSADHG 62 A +L+ C C A A K +LG + +E LKL C R ++L A G Sbjct: 12 AAALLSCLCLAAAGKAKAEQVVVLGQTTLAYSENESYMLKLANCDRQPRYTAVKLQALRG 71 Query: 63 DLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNS 122 + L ++ + L I + +G T WI + NKRC+S+IT G T NS Sbjct: 72 NADLKQVTLVY--GNGEVDRLPIVKRLNQGNETGWIAVQG---NKRCISRITIVGDTSNS 126 Query: 123 S-DMATLKIIG 132 S + A LK++G Sbjct: 127 SANRALLKVLG 137 Score = 82.2 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 9/120 (7%) Query: 17 LCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKR---IQLSADHGDLQLSGASVYF 73 T+ LLG + E + L L C R +++ A G + ++ Sbjct: 149 GSSTSSFYQGWLLGETPLAFAENDREVLNLGNCDRQPRYQAVKVRAVRGSADIKQLNL-- 206 Query: 74 KAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVN-SSDMATLKIIG 132 + +Q L + + +G T WI++ NKRC+++IT G T + S + A L++ G Sbjct: 207 RFGDGTTQQLYVRENLNQGSETRWIDLQG---NKRCITRITVVGDTDDRSQNRALLQVFG 263 >UniRef50_B2U231 Putative uncharacterized protein n=1 Tax=Shigella boydii CDC 3083-94 RepID=B2U231_SHIB3 Length = 68 Score = 98.7 bits (244), Expect = 4e-20, Method: Composition-based stats. Identities = 61/62 (98%), Positives = 61/62 (98%) Query: 16 MLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKA 75 MLCCTAQANDHKLLG IAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKA Sbjct: 1 MLCCTAQANDHKLLGVIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKA 60 Query: 76 AR 77 AR Sbjct: 61 AR 62 >UniRef50_B1KEX4 Putative uncharacterized protein n=6 Tax=Gammaproteobacteria RepID=B1KEX4_SHEWM Length = 128 Score = 98.7 bits (244), Expect = 5e-20, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 10/131 (7%) Query: 2 KSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADH 61 + V + + ++ L+ C AQA+D LG + + + L +CR +++ A+ Sbjct: 5 QLVAKLLVTTSL-LVTACLAQADDQITLGRTILLGAGDHGAKIPLLICRKADALKVRAER 63 Query: 62 GDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVN 121 +L L V F ++++++ ++K+ Q T W KRCV K+ G++ Sbjct: 64 -NLNLEKIIVTFN--NGSTKTISFYRDLKKDQETQWRGFGY----KRCVKKLEVFGNSDG 116 Query: 122 SSDMATLKIIG 132 S A +K++G Sbjct: 117 S--RAGVKVLG 125 >UniRef50_D0Z2P1 Putative uncharacterized protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2P1_LISDA Length = 129 Score = 98.4 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 56/130 (43%), Gaps = 10/130 (7%) Query: 4 VFTISASLAISLMLCCT-AQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHG 62 F + +SL+ T A A+D LG + + + +P CR I++ A+ Sbjct: 5 KFFTQLLVGVSLLGSATLAHADDQFTLGRTILLEHGNLAAKIPVPACRYTNAIKVKAER- 63 Query: 63 DLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNS 122 D++L V+F Q++ ++ + + T W +RCV+ + G++ + Sbjct: 64 DVRLRKVVVHF--QNGEKQTIKFYRDLDKNEKTAWRYFGF----RRCVTSLDVYGNSERT 117 Query: 123 SDMATLKIIG 132 + +++ G Sbjct: 118 T--GGIRVYG 125 >UniRef50_A4SJI8 Putative uncharacterized protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SJI8_AERS4 Length = 138 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 9/112 (8%) Query: 21 AQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSAS 80 A A+D LG + + + + VCR K I + A +L L+ V++ +S Sbjct: 34 AMADDEFRLGKTLLLGVGDHAAIIPIIVCRPAKSIMVKAGR-ELTLNRVKVFY--GNDSS 90 Query: 81 QSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKIIG 132 ++L ++K Q +DW ++ S + C+ +I G++ S A +K+ G Sbjct: 91 KTLTFDKDLKADQESDWKSLGS----RLCIKRIEVYGNSEGS--KAGVKVYG 136 >UniRef50_A0KSE5 Putative uncharacterized protein n=3 Tax=Shewanella RepID=A0KSE5_SHESA Length = 138 Score = 73.3 bits (178), Expect = 2e-12, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 54/109 (49%), Gaps = 9/109 (8%) Query: 24 NDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSL 83 +D LG + + + L +CR K I++ A+ D+ + V + ++++ Sbjct: 37 DDKITLGRTLLLGIGDHPAIIPLIICRQAKHIRIKAER-DVSIDRVVVTY--GDDKTRTV 93 Query: 84 NIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKIIG 132 +E+++ + ++W ++ + +RCV KI G++ S A +K++G Sbjct: 94 RFDTELEKDEHSEWKSLGA----RRCVKKIEVYGNSDRS--KAGIKVLG 136 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7M9S5 UPF0412 protein yaaI n=95 Tax=Enterobacteriaceae... 178 5e-44 UniRef50_D0I9V6 Putative uncharacterized protein n=1 Tax=Grimont... 142 3e-33 UniRef50_D0Z2P1 Putative uncharacterized protein n=1 Tax=Photoba... 136 2e-31 UniRef50_B1KEX4 Putative uncharacterized protein n=6 Tax=Gammapr... 136 3e-31 UniRef50_Q2C6W3 Putative uncharacterized protein n=2 Tax=Photoba... 134 1e-30 UniRef50_A4SJI8 Putative uncharacterized protein n=1 Tax=Aeromon... 124 9e-28 UniRef50_A0KSE5 Putative uncharacterized protein n=3 Tax=Shewane... 116 2e-25 UniRef50_B8HV24 Putative uncharacterized protein n=1 Tax=Cyanoth... 111 8e-24 UniRef50_B2U231 Putative uncharacterized protein n=1 Tax=Shigell... 90 2e-17 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_B7M9S5 UPF0412 protein yaaI n=95 Tax=Enterobacteriaceae RepID=YAAI_ECO45 Length = 134 Score = 178 bits (451), Expect = 5e-44, Method: Composition-based stats. Identities = 127/134 (94%), Positives = 130/134 (97%) Query: 1 MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSAD 60 MKSV TISASLAISLMLCCTAQANDHK+LG IAMPRNETNDLALKLPVCRIVKRIQLSAD Sbjct: 1 MKSVITISASLAISLMLCCTAQANDHKILGVIAMPRNETNDLALKLPVCRIVKRIQLSAD 60 Query: 61 HGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTV 120 HGDLQLSGAS+YFKA RSASQ+LNIPSEIKE QTTDWININSDNDNKRCVSKITFSGHTV Sbjct: 61 HGDLQLSGASIYFKATRSASQTLNIPSEIKEEQTTDWININSDNDNKRCVSKITFSGHTV 120 Query: 121 NSSDMATLKIIGDD 134 NSSDMATLKIIGDD Sbjct: 121 NSSDMATLKIIGDD 134 >UniRef50_D0I9V6 Putative uncharacterized protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9V6_VIBHO Length = 127 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 11/133 (8%) Query: 1 MKSVFTISASLAISLMLCCT-AQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSA 59 MKS F + LA+S T A+A+D LG + +N + L VCR V I++ A Sbjct: 3 MKSWFFL-VCLALSFFGASTLARADDEITLGRTIVFKNTDYGAPIPLLVCRRVDAIKVKA 61 Query: 60 DHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHT 119 D D+ L FK +++ IKE TT W + KRCV K+ G + Sbjct: 62 DR-DMYLRKVVATFK--NGETKTFRFYRNIKEDGTTRWREL----PYKRCVKKLEVYGES 114 Query: 120 VNSSDMATLKIIG 132 NSS A +++ G Sbjct: 115 KNSS--AGVRVYG 125 >UniRef50_D0Z2P1 Putative uncharacterized protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2P1_LISDA Length = 129 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 56/130 (43%), Gaps = 10/130 (7%) Query: 4 VFTISASLAISLMLCCT-AQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHG 62 F + +SL+ T A A+D LG + + + +P CR I++ A+ Sbjct: 5 KFFTQLLVGVSLLGSATLAHADDQFTLGRTILLEHGNLAAKIPVPACRYTNAIKVKAER- 63 Query: 63 DLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNS 122 D++L V+F Q++ ++ + + T W +RCV+ + G++ + Sbjct: 64 DVRLRKVVVHF--QNGEKQTIKFYRDLDKNEKTAWRYFGF----RRCVTSLDVYGNSERT 117 Query: 123 SDMATLKIIG 132 + +++ G Sbjct: 118 T--GGIRVYG 125 >UniRef50_B1KEX4 Putative uncharacterized protein n=6 Tax=Gammaproteobacteria RepID=B1KEX4_SHEWM Length = 128 Score = 136 bits (341), Expect = 3e-31, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 10/131 (7%) Query: 2 KSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADH 61 + V + + ++ L+ C AQA+D LG + + + L +CR +++ A+ Sbjct: 5 QLVAKLLVTTSL-LVTACLAQADDQITLGRTILLGAGDHGAKIPLLICRKADALKVRAER 63 Query: 62 GDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVN 121 +L L V F ++++++ ++K+ Q T W KRCV K+ G++ Sbjct: 64 -NLNLEKIIVTFN--NGSTKTISFYRDLKKDQETQWRGFGY----KRCVKKLEVFGNSDG 116 Query: 122 SSDMATLKIIG 132 S A +K++G Sbjct: 117 S--RAGVKVLG 125 >UniRef50_Q2C6W3 Putative uncharacterized protein n=2 Tax=Photobacterium RepID=Q2C6W3_9GAMM Length = 125 Score = 134 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 9/132 (6%) Query: 1 MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSAD 60 MK T++A++ +S M T + D LG + + + + +P+CR K IQ+ A+ Sbjct: 1 MKLKATMAATIMLSSMAFSTTASADTFTLGRTILLEAKNSHAKIPVPLCRNTKSIQIKAE 60 Query: 61 HGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTV 120 D+ L+ V FK +S+ ++ + + TDW + + RCV+ I G Sbjct: 61 R-DVFLTK--VVFKFQNGSSRVFQFQRKLDKNEKTDWRRFSYE----RCVTDIQVHGRAE 113 Query: 121 NSSDMATLKIIG 132 + S A +K++G Sbjct: 114 DGS--AGIKVLG 123 >UniRef50_A4SJI8 Putative uncharacterized protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SJI8_AERS4 Length = 138 Score = 124 bits (311), Expect = 9e-28, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 9/112 (8%) Query: 21 AQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSAS 80 A A+D LG + + + + VCR K I + A +L L+ V++ +S Sbjct: 34 AMADDEFRLGKTLLLGVGDHAAIIPIIVCRPAKSIMVKAGR-ELTLNRVKVFY--GNDSS 90 Query: 81 QSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKIIG 132 ++L ++K Q +DW ++ S + C+ +I G++ S A +K+ G Sbjct: 91 KTLTFDKDLKADQESDWKSLGS----RLCIKRIEVYGNSEGS--KAGVKVYG 136 >UniRef50_A0KSE5 Putative uncharacterized protein n=3 Tax=Shewanella RepID=A0KSE5_SHESA Length = 138 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 59/131 (45%), Gaps = 9/131 (6%) Query: 2 KSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADH 61 + + + S+ +D LG + + + L +CR K I++ A+ Sbjct: 15 QLIICLLLMFTTSVAYAKNDDKDDKITLGRTLLLGIGDHPAIIPLIICRQAKHIRIKAER 74 Query: 62 GDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVN 121 D+ + V + ++++ +E+++ + ++W ++ + +RCV KI G++ Sbjct: 75 -DVSIDRVVVTY--GDDKTRTVRFDTELEKDEHSEWKSLGA----RRCVKKIEVYGNSDR 127 Query: 122 SSDMATLKIIG 132 S A +K++G Sbjct: 128 S--KAGIKVLG 136 >UniRef50_B8HV24 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV24_CYAP4 Length = 264 Score = 111 bits (277), Expect = 8e-24, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 15/142 (10%) Query: 1 MKSVFTISASLAISLMLC-CTAQANDHK-----LLGAIAMPRNETNDLALKLPVCRIVKR 54 M + A +L+ C C A A K +LG + +E LKL C R Sbjct: 1 MSLNKSFKRMSAAALLSCLCLAAAGKAKAEQVVVLGQTTLAYSENESYMLKLANCDRQPR 60 Query: 55 ---IQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVS 111 ++L A G+ L ++ + L I + +G T WI + NKRC+S Sbjct: 61 YTAVKLQALRGNADLKQVTLVY--GNGEVDRLPIVKRLNQGNETGWIAVQG---NKRCIS 115 Query: 112 KITFSGHTVNSS-DMATLKIIG 132 +IT G T NSS + A LK++G Sbjct: 116 RITIVGDTSNSSANRALLKVLG 137 Score = 75.2 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 9/120 (7%) Query: 17 LCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKR---IQLSADHGDLQLSGASVYF 73 T+ LLG + E + L L C R +++ A G + ++ F Sbjct: 149 GSSTSSFYQGWLLGETPLAFAENDREVLNLGNCDRQPRYQAVKVRAVRGSADIKQLNLRF 208 Query: 74 KAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHT-VNSSDMATLKIIG 132 +Q L + + +G T WI++ NKRC+++IT G T S + A L++ G Sbjct: 209 --GDGTTQQLYVRENLNQGSETRWIDLQG---NKRCITRITVVGDTDDRSQNRALLQVFG 263 >UniRef50_B2U231 Putative uncharacterized protein n=1 Tax=Shigella boydii CDC 3083-94 RepID=B2U231_SHIB3 Length = 68 Score = 90.2 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 61/62 (98%), Positives = 61/62 (98%) Query: 16 MLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKA 75 MLCCTAQANDHKLLG IAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKA Sbjct: 1 MLCCTAQANDHKLLGVIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKA 60 Query: 76 AR 77 AR Sbjct: 61 AR 62 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.126 0.312 Lambda K H 0.267 0.0385 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 504,638,144 Number of Sequences: 3077464 Number of extensions: 12790927 Number of successful extensions: 38649 Number of sequences better than 1.0e-01: 9 Number of HSP's better than 0.1 without gapping: 18 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 38594 Number of HSP's gapped (non-prelim): 27 length of query: 134 length of database: 1,040,396,356 effective HSP length: 99 effective length of query: 35 effective length of database: 735,727,420 effective search space: 25750459700 effective search space used: 25750459700 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 87 (38.2 bits)