BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (162 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A7C6B4 Rod shape-determining protein MreD n=1 Tax=Beggi... 130 1e-29 UniRef50_C4L8L5 Rod shape-determining protein MreD n=1 Tax=Tolum... 128 5e-29 UniRef50_Q2BKP8 Rod shape-determining protein MreD n=2 Tax=Gamma... 127 9e-29 UniRef50_A6VWN4 Rod shape-determining protein MreD n=2 Tax=Marin... 126 2e-28 UniRef50_C7R9G4 Rod shape-determining protein MreD n=1 Tax=Kangi... 125 4e-28 UniRef50_C6MDC7 Rod shape-determining protein MreD n=1 Tax=Nitro... 124 7e-28 UniRef50_Q47VG6 Rod shape-determining protein MreD n=4 Tax=Alter... 124 1e-27 UniRef50_P0ABH6 Rod shape-determining protein mreD n=132 Tax=Ent... 122 4e-27 UniRef50_Q15ZH1 Rod shape-determining protein MreD n=4 Tax=Alter... 122 4e-27 UniRef50_C4K6Y8 Rod shape-determining protein n=1 Tax=Candidatus... 122 4e-27 UniRef50_C5SBR5 Rod shape-determining protein MreD n=1 Tax=Alloc... 122 4e-27 UniRef50_Q2YC95 Rod shape-determining protein MreD n=1 Tax=Nitro... 122 5e-27 UniRef50_Q0AFP8 Rod shape-determining protein MreD n=2 Tax=Nitro... 122 5e-27 UniRef50_A0KFA9 Rod shape-determining protein MreD n=3 Tax=Gamma... 121 7e-27 UniRef50_C6P2H4 Rod shape-determining protein MreD n=1 Tax=Sider... 121 1e-26 UniRef50_Q7NPY3 Rod shape-determining protein MreD n=2 Tax=Chrom... 120 1e-26 UniRef50_Q5QWE3 Rod shape-determining protein n=2 Tax=Idiomarina... 119 2e-26 UniRef50_B2SMY7 Rod shape-determining protein MreD n=20 Tax=Xant... 117 1e-25 UniRef50_B7V018 Rod shape-determining protein MreD n=21 Tax=Pseu... 117 2e-25 UniRef50_Q07WQ1 Rod shape-determining protein MreD n=21 Tax=Shew... 116 4e-25 UniRef50_C5BSY4 Rod shape-determining protein MreD n=1 Tax=Tered... 115 4e-25 UniRef50_Q0KFF4 Rod shape-determining protein MreD n=12 Tax=Burk... 115 5e-25 UniRef50_B5JU59 Rod shape-determining protein MreD n=1 Tax=gamma... 114 9e-25 UniRef50_A4BLX4 Rod shape-determining protein MreD n=1 Tax=Nitro... 114 1e-24 UniRef50_C0N753 Rod shape-determining protein MreD n=1 Tax=Methy... 114 1e-24 UniRef50_Q60CK4 Rod shape-determining protein MreD n=1 Tax=Methy... 114 1e-24 UniRef50_A4BGL4 Rod shape-determining protein MreD n=1 Tax=Reine... 113 2e-24 UniRef50_C4GIM3 Putative uncharacterized protein n=1 Tax=Kingell... 112 3e-24 UniRef50_A4A5B4 Rod shape-determining protein MreD n=1 Tax=Congr... 112 3e-24 UniRef50_A0Z7H0 Rod shape-determining protein n=1 Tax=marine gam... 112 3e-24 UniRef50_B8GL91 Rod shape-determining protein MreD n=2 Tax=Thioa... 112 3e-24 UniRef50_C7RML3 Rod shape-determining protein MreD n=3 Tax=Betap... 112 3e-24 UniRef50_B7RTI7 Rod shape-determining protein MreD n=2 Tax=uncla... 111 7e-24 UniRef50_A1WVS1 Rod shape-determining protein MreD n=2 Tax=Ectot... 111 9e-24 UniRef50_Q1QVB9 Rod shape-determining protein MreD n=1 Tax=Chrom... 111 1e-23 UniRef50_A9N8Z0 Rod shape-determining protein MreD n=7 Tax=Coxie... 110 2e-23 UniRef50_C0DXR0 Putative uncharacterized protein n=1 Tax=Eikenel... 109 3e-23 UniRef50_B8KR95 Rod shape-determining protein MreD n=1 Tax=gamma... 109 3e-23 UniRef50_B3PC04 Putative rod shape-determining protein MreD n=1 ... 109 4e-23 UniRef50_A1U482 Rod shape-determining protein MreD n=3 Tax=Marin... 109 5e-23 UniRef50_Q21FT2 Rod shape-determining protein MreD n=1 Tax=Sacch... 108 6e-23 UniRef50_A9I0I9 Rod shape-determining protein MreD n=5 Tax=Borde... 107 9e-23 UniRef50_C5V1V9 Rod shape-determining protein MreD n=1 Tax=Galli... 107 9e-23 UniRef50_Q21RI3 Rod shape-determining protein MreD n=66 Tax=Burk... 106 2e-22 UniRef50_C1D5N3 MreD n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 106 3e-22 UniRef50_Q1GYC9 Rod shape-determining protein MreD n=3 Tax=Methy... 106 4e-22 UniRef50_C7I0H6 Rod shape-determining protein MreD n=4 Tax=Burkh... 105 6e-22 UniRef50_Q0VS68 Rod shape-determining protein MreD n=2 Tax=Alcan... 104 8e-22 UniRef50_A1K1T9 Rod shape-determining protein n=4 Tax=Rhodocycla... 104 1e-21 UniRef50_Q1ZG63 Hypothetical rod shape-determining protein MreD ... 104 1e-21 UniRef50_B5F9L8 Rod shape-determining protein MreD n=89 Tax=Gamm... 104 2e-21 UniRef50_Q1MYL6 Rod shape-determining protein MreD n=1 Tax=Berma... 102 5e-21 UniRef50_Q7VRC2 Rod shape-determining protein MreD n=2 Tax=Candi... 100 2e-20 UniRef50_C5TMH6 Rod shape-determining protein MreD n=5 Tax=Neiss... 95 8e-19 UniRef50_A4T0H0 Rod shape-determining protein MreD n=2 Tax=Polyn... 93 3e-18 UniRef50_UPI00016994A6 Rod shape-determining protein MreD n=1 Ta... 91 9e-18 UniRef50_Q2SBH0 Cell shape-determining protein n=1 Tax=Hahella c... 91 1e-17 UniRef50_Q8D1V7 MreD protein n=1 Tax=Wigglesworthia glossinidia ... 91 2e-17 UniRef50_A8PNB8 Rod shape-determining protein MreD n=1 Tax=Ricke... 90 3e-17 UniRef50_B0VS17 Rod shape-determining protein n=17 Tax=Acinetoba... 90 3e-17 UniRef50_Q3SM35 Putative uncharacterized protein n=1 Tax=Thiobac... 89 3e-17 UniRef50_A1STZ6 Rod shape-determining protein MreD n=1 Tax=Psych... 89 6e-17 UniRef50_D0L063 Rod shape-determining protein MreD n=1 Tax=Halot... 88 1e-16 UniRef50_P44476 Rod shape-determining protein mreD n=32 Tax=Past... 87 2e-16 UniRef50_Q1YU27 Rod shape-determining protein MreD n=1 Tax=gamma... 86 3e-16 UniRef50_B5EMQ8 Rod shape-determining protein MreD n=3 Tax=Acidi... 86 4e-16 UniRef50_Q31F49 Rod shape-determining protein MreD n=1 Tax=Thiom... 84 1e-15 UniRef50_A5WCI6 Putative uncharacterized protein n=1 Tax=Psychro... 83 3e-15 UniRef50_A5IGA1 Rod shape determining protein MreD n=5 Tax=Legio... 83 4e-15 UniRef50_C8PVZ5 Rod shape-determining protein MreD n=1 Tax=Enhyd... 81 8e-15 UniRef50_Q1QDJ0 Rod shape-determining protein MreD n=2 Tax=Psych... 81 1e-14 UniRef50_A0L7I2 Rod shape-determining protein MreD n=1 Tax=Magne... 80 2e-14 UniRef50_Q1LU39 Rod shape-determining protein MreD n=1 Tax=Bauma... 77 2e-13 UniRef50_A5CW44 Rod shape-determining protein MreD n=3 Tax=Gamma... 77 2e-13 UniRef50_B0SG26 Cell shape-determining protein n=6 Tax=Leptospir... 74 2e-12 UniRef50_C8PRS7 Rod shape-determining protein MreD n=1 Tax=Trepo... 66 6e-10 UniRef50_Q73N05 Rod shape-determining protein MreD n=1 Tax=Trepo... 64 2e-09 UniRef50_Q9RH81 Rod shape determining protein MreD (Fragment) n=... 63 2e-09 UniRef50_B2S393 Rod shape-determining protein n=2 Tax=Treponema ... 52 7e-06 UniRef50_B1I4Q2 Putative uncharacterized protein n=1 Tax=Candida... 50 2e-05 UniRef50_Q0AWG6 Putative uncharacterized protein n=1 Tax=Syntrop... 48 9e-05 UniRef50_C1F7C9 Rod shape-determining protein MreD n=1 Tax=Acido... 46 5e-04 UniRef50_A4J7K3 Putative uncharacterized protein n=1 Tax=Desulfo... 45 8e-04 UniRef50_D1AAV7 Rod shape-determining protein MreD n=1 Tax=Therm... 43 0.003 UniRef50_UPI0000E87A9D hypothetical protein MB2181_01455 n=1 Tax... 43 0.003 UniRef50_B7ANR5 Putative uncharacterized protein n=1 Tax=Bactero... 43 0.003 UniRef50_B6ITQ9 Putative uncharacterized protein n=1 Tax=Rhodosp... 43 0.004 UniRef50_B8FVF2 Rod shape-determining protein MreD n=2 Tax=Desul... 43 0.004 UniRef50_A7HW07 Rod shape-determining protein MreD n=1 Tax=Parvi... 42 0.006 UniRef50_Q1IRN5 Putative uncharacterized protein n=1 Tax=Candida... 42 0.006 UniRef50_C1QD51 Rod shape-determining protein MreD n=2 Tax=Brach... 42 0.007 UniRef50_C0EWW6 Putative uncharacterized protein n=1 Tax=Eubacte... 42 0.007 UniRef50_D2BCD8 Putative uncharacterized protein n=1 Tax=Strepto... 42 0.007 UniRef50_B3T1Z2 Putative rod shape-determining protein MreD n=1 ... 42 0.007 UniRef50_A8TM61 Putative uncharacterized protein n=1 Tax=alpha p... 42 0.009 UniRef50_A8MHM1 Putative uncharacterized protein n=1 Tax=Alkalip... 41 0.013 UniRef50_B4V3T9 Rod shape-determining protein n=18 Tax=Streptomy... 41 0.014 UniRef50_B3E5W6 Rod shape-determining protein MreD n=1 Tax=Geoba... 40 0.026 UniRef50_C8WAG3 Rod shape-determining protein MreD n=1 Tax=Atopo... 40 0.030 UniRef50_A5D430 Cell shape-determining protein n=1 Tax=Pelotomac... 40 0.034 UniRef50_A4U0U0 Cell shape-determining protein n=3 Tax=Magnetosp... 40 0.035 UniRef50_C0CHV5 Putative uncharacterized protein n=2 Tax=Clostri... 40 0.036 UniRef50_Q01ZY2 Putative uncharacterized protein n=1 Tax=Candida... 39 0.039 UniRef50_D1BNE8 Rod shape-determining protein MreD n=3 Tax=Veill... 39 0.040 UniRef50_A6TQI1 Putative uncharacterized protein n=1 Tax=Alkalip... 39 0.042 UniRef50_C8WXL3 Rod shape-determining protein MreD n=2 Tax=Alicy... 39 0.044 UniRef50_C9R8K4 Rod shape-determining protein MreD n=1 Tax=Ammon... 39 0.050 UniRef50_C4Z086 Putative uncharacterized protein n=1 Tax=Eubacte... 39 0.050 UniRef50_A3JW84 Sensor protein n=2 Tax=Rhodobacterales bacterium... 39 0.052 UniRef50_C7LYA8 Rod shape-determining protein MreD n=1 Tax=Acidi... 39 0.053 UniRef50_C8WGI8 Rod shape-determining protein MreD n=1 Tax=Egger... 39 0.058 UniRef50_A5Z699 Putative uncharacterized protein n=1 Tax=Eubacte... 39 0.064 UniRef50_Q0AN30 Putative uncharacterized protein n=1 Tax=Maricau... 39 0.064 UniRef50_A1HP02 Rod shape-determining protein MreD n=1 Tax=Therm... 39 0.070 UniRef50_B7GIQ3 Cell shape-determining protein n=1 Tax=Anoxybaci... 39 0.071 UniRef50_UPI0001C15A7A conserved hypothetical protein n=2 Tax=No... 39 0.075 UniRef50_C1XP36 Rod shape-determining protein MreD n=2 Tax=Meiot... 39 0.079 UniRef50_C9LXR8 Rod shape-determining protein MreD n=1 Tax=Selen... 38 0.084 UniRef50_C5RGQ5 Rod shape-determining protein MreD n=1 Tax=Clost... 38 0.096 >UniRef50_A7C6B4 Rod shape-determining protein MreD n=1 Tax=Beggiatoa sp. PS RepID=A7C6B4_9GAMM Length = 163 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 93/162 (57%), Gaps = 1/162 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M+S R G WVI LSF+++ +L I+P P +++RP+WV L+L+YW +A+P RV V TG+ Sbjct: 1 MSSERHHGGWVIILSFIVSFMLAIIPLPAWAVLWRPDWVALVLIYWCIAVPQRVGVATGW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G I D++ + LG L++ I Y+ ++ R LWQQA+ V L + I Sbjct: 61 FVGVIYDVLKDTLLGQNALSLCFIGYVSVKWHRQVRLFPLWQQAIGVFGLLSISHWIEAL 120 Query: 121 A-EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + ++ ++ +LWPW+F+++R +R+ + V Sbjct: 121 IYKNMLGYSLLTGSFISQVFISMILWPWVFVILRDMRRTYRV 162 >UniRef50_C4L8L5 Rod shape-determining protein MreD n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8L5_TOLAT Length = 163 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 60/156 (38%), Positives = 110/156 (70%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 G+ I+L+ ++A++L ++P P + +FRP+WV L++LYW++ALPH +NV + +++G I+ Sbjct: 8 HGKGSIYLTLIVAIILTMVPLPVAIDMFRPDWVALVVLYWVIALPHHLNVVSAWIVGLIM 67 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 D++ GSTLG+ L+M++I+ +VA +YQ RN ++WQQALV+ L V +++FW E L Sbjct: 68 DILLGSTLGIHALSMAVISCVVAAQYQKIRNFSVWQQALVMGSLIFVGQLLIFWVEHLFA 127 Query: 127 NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + W+S+ + +LWP ++L +R +R++F ++ Sbjct: 128 SPRLNTRFVWASLSSTLLWPSVYLFLRYIRRRFNIR 163 >UniRef50_Q2BKP8 Rod shape-determining protein MreD n=2 Tax=Gammaproteobacteria RepID=Q2BKP8_9GAMM Length = 166 Score = 127 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 59/161 (36%), Positives = 98/161 (60%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + + G ++I +FLI L+L +P P + RP WV +IL+YW++ALPHRV +G F Sbjct: 6 PAAQGGGGFIILGTFLIGLMLSQIPLPYFIEWARPEWVAMILIYWVMALPHRVGMGMAFF 65 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G +LD+I GS LG+ L+++ IA+L L +Q R L QQA++VM+L + ++ W Sbjct: 66 LGLLLDVIKGSVLGLNALSLTTIAFLTLLLHQRLRMFPLIQQAMMVMVLVGINQLLFHWM 125 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + +V+G+LWPW+F+++R VR+ F ++ Sbjct: 126 QAFTGFTGDSLIFLLPCLVSGILWPWLFVILRGVRRFFRIR 166 >UniRef50_A6VWN4 Rod shape-determining protein MreD n=2 Tax=Marinomonas RepID=A6VWN4_MARMS Length = 157 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 57/157 (36%), Positives = 96/157 (61%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +V ++ L AL+L+ MP+P+ L+ FRP W LL++LYW++ALP RV VG + +G + Sbjct: 1 MKPIFVFCITLLTALMLEAMPFPEELVWFRPEWALLVILYWVIALPFRVGVGLAWFLGLM 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL+ G +G L IIAY A+ Y+ R WQQ + LL + ++ FW + + Sbjct: 61 VDLLQGGIIGQHSLTYVIIAYTCAVFYKRLRMYHRWQQGFFICLLVSINQLLDFWIDHYL 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + +F +V+ G+LWPW F+++R VR+ +A++ Sbjct: 121 GHAEPTLMIFMPAVITGLLWPWSFIILRSVRRIYAIR 157 >UniRef50_C7R9G4 Rod shape-determining protein MreD n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9G4_KANKD Length = 165 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 97/161 (60%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + G WVI LS +I ++L I P P+ FRP++ LI YW++ALPHR+ + F Sbjct: 4 MKNEVKHGTWVIILSLIIGMILDIFPLPETWQPFRPSFTFLIFSYWVIALPHRIGLLWAF 63 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 + G LD + G+TLG+ +++++ +++ L +Q R LW+QAL ++ LS++ IV W Sbjct: 64 ITGLALDALLGTTLGLHCFSLAVLTFILQLNHQRLRLFPLWKQALTLIFLSVIYFAIVLW 123 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 L + +++ NG+LWPW+F+L+R +R+ F V Sbjct: 124 LARLTGKPESDSWYWIATLTNGLLWPWLFVLLRDIRRYFHV 164 >UniRef50_C6MDC7 Rod shape-determining protein MreD n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MDC7_9PROT Length = 191 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 73/149 (48%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 Y G W I S +I L+L +P +L++ RP++V L + YW + P+++ + F MG Sbjct: 30 YVPAGNWFIATSLIIGLILNFLPLQGDLLISRPDFVALAITYWNVNHPYKLGMSMAFGMG 89 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 ++D+ + LG LA S+I YL + + R +L +QA + L++ I++ Sbjct: 90 LMVDVGNAGILGQHALAYSVIFYLTLIFGRRLRLFSLLKQAPQIGFFLLIMQIVIILIAL 149 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLM 152 + F ++V +LW LM Sbjct: 150 SNGSALPGWGYFLATVTGTLLWAPASFLM 178 >UniRef50_Q47VG6 Rod shape-determining protein MreD n=4 Tax=Alteromonadales RepID=Q47VG6_COLP3 Length = 159 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 68/157 (43%), Positives = 109/157 (69%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 S ++I+L+ LIAL+ I P P ++ FRP+WVL++L+YW LALP+++N+ T +VMG I Sbjct: 3 SNNGFIIFLTLLIALMASITPMPLSVDAFRPDWVLIVLVYWCLALPNKINIFTAWVMGFI 62 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LD++ GS LGV AM++ Y+V + +Q RN ++WQQAL++ +LS ++VFW + + Sbjct: 63 LDVLLGSVLGVHACAMALSVYIVVVNFQKIRNFSVWQQALIIGVLSAQYHLVVFWLQRFL 122 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 +V F P + + VLWPW+FLL+R+VR+ F ++ Sbjct: 123 SDVVFLPNYLYPVITTIVLWPWVFLLLRRVRRHFRIE 159 >UniRef50_P0ABH6 Rod shape-determining protein mreD n=132 Tax=Enterobacteriaceae RepID=MRED_ECO57 Length = 162 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 162/162 (100%), Positives = 162/162 (100%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF Sbjct: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW Sbjct: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ Sbjct: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 >UniRef50_Q15ZH1 Rod shape-determining protein MreD n=4 Tax=Alteromonadales RepID=Q15ZH1_PSEA6 Length = 158 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 67/152 (44%), Positives = 105/152 (69%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 I LS ++AL+LQIMP P + +RP+WV L+L YW LALP RVNVG F++G +LD++ Sbjct: 7 TIGLSIIVALVLQIMPMPAIVEQYRPDWVFLVLGYWALALPERVNVGVAFIVGLVLDILL 66 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 G+++GV AMS+ +++A YQ RN ++WQQA+V+ +L + +++VFW L+ ++ F Sbjct: 67 GTSIGVHSFAMSLSVFVLAANYQRLRNYSVWQQAVVIGILCALYNLVVFWLMHLLTDIYF 126 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 W + + V+WPWIF L+R+VR+QF + Sbjct: 127 MLTYMWPVITSMVIWPWIFWLLRRVRRQFRLS 158 >UniRef50_C4K6Y8 Rod shape-determining protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K6Y8_HAMD5 Length = 162 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 97/162 (59%), Positives = 136/162 (83%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M+ Y+S+GRWVI+LSFLI ++LQIMPWP + +F+P+W+LLI +YW++ALPHRVN+GTGF Sbjct: 1 MSYYKSRGRWVIYLSFLIGIILQIMPWPQQIDMFQPSWLLLIFIYWVMALPHRVNLGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G I DL+ GSTLG+ L MS+IAYLV +K+Q FRN+ALWQQ L V+LLS+++ I VF Sbjct: 61 ILGLITDLLLGSTLGIHSLGMSMIAYLVTIKFQTFRNMALWQQTLFVILLSIIMTITVFL 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 EFL+I+VSF +F ++++NG++WPW+FLLMRK R++F VQ Sbjct: 121 TEFLIIHVSFNTGIFSNALINGIVWPWLFLLMRKTRRKFLVQ 162 >UniRef50_C5SBR5 Rod shape-determining protein MreD n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBR5_CHRVI Length = 172 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 49/160 (30%), Positives = 79/160 (49%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + Q W I LS +A+ L I+P D +RP W +L +L+W A P RV + TGFV Sbjct: 12 SYKPRQPFWPIALSLTLAMYLTILPLSDWPWDYRPPWTVLAILFWCFATPRRVGIFTGFV 71 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G +LD+++G+ LG L++S+ AYL + R WQQA V L+ L ++ W Sbjct: 72 VGLMLDVLTGALLGQHALSLSVTAYLALVLRPRIRIFPPWQQAFFVALILLTERLLTLWI 131 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + S++V WP + L+ ++ + Sbjct: 132 IGATGQPMPALTYWISALVGLAFWPIMAWLLVPFERRLGL 171 >UniRef50_Q2YC95 Rod shape-determining protein MreD n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YC95_NITMU Length = 173 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 78/155 (50%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 W I LS ++ALLL ++P +P++V L++LYW L P RV +G F MG + Sbjct: 14 PAKSWFIMLSLIVALLLNLIPVTGTARTLQPDFVALVMLYWYLNEPQRVGIGMAFWMGLL 73 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL + ST G L S++A++ + + ++QA + L+ L I+ A Sbjct: 74 MDLSNASTFGQHALGYSVMAFMALVFNRRMGIFEGYKQAPQIGLVLLSGQIVTLLAGLFA 133 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 + F S+V +LWP + ++R ++ ++ Sbjct: 134 GSPFPGWNFFLGSIVGMLLWPLLSAILRVPQKPWS 168 >UniRef50_Q0AFP8 Rod shape-determining protein MreD n=2 Tax=Nitrosomonas RepID=Q0AFP8_NITEC Length = 183 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 77/153 (50%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +I++S + A+L+ +MP+ ++V RP++V L LLYW + P + + F+ G Sbjct: 24 PARKSLIYISLITAVLINLMPFDKVILVLRPDFVALTLLYWNIYQPQQAGMSIAFISGLF 83 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+I S +G +A +I + + Y+ R +QQ V+ + L +VF L Sbjct: 84 MDVIDVSIMGQHAIAYCLITFFALILYRRLRLFNAFQQIPAVLWILLSGQGVVFLTGILA 143 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + +F +SV + WP + L+ R+Q Sbjct: 144 GSYIPEWYIFLASVTGALCWPLLVFLLGIFRKQ 176 >UniRef50_A0KFA9 Rod shape-determining protein MreD n=3 Tax=Gammaproteobacteria RepID=A0KFA9_AERHH Length = 161 Score = 121 bits (305), Expect = 7e-27, Method: Composition-based stats. Identities = 79/159 (49%), Positives = 112/159 (70%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 + GR IW+S L+AL L I+P P L FRP+W+ ++L+YW LALPHR NVGT +V G Sbjct: 3 QPASGRIWIWISILLALSLSILPLPFQLEPFRPDWLAMVLIYWALALPHRTNVGTAWVAG 62 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 +LD++ GSTLGVR +AM+I YL A ++Q RN +LWQQAL++ LSLV + +FWAE Sbjct: 63 LLLDVLLGSTLGVRAMAMAITTYLAAFQFQKIRNFSLWQQALIIGCLSLVGKVTIFWAEH 122 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 L S FWS++ ++WPW+FL++RKVR++F ++ Sbjct: 123 LFSRASLNFAYFWSTLSTMLIWPWVFLVLRKVRRRFNIK 161 >UniRef50_C6P2H4 Rod shape-determining protein MreD n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2H4_9PROT Length = 172 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 1/152 (0%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 I S +A++L +PW + RP++V L+LLYW PHRV +G +V+G Sbjct: 14 PASTSFIIFSLFVAVMLNWLPWHGWALALRPDFVALVLLYWCTHKPHRVGIGIAWVVGIF 73 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ S G LA +++A+ + ++ + L QQA+ V + L+ Sbjct: 74 SDVADASLFGQHALAYTVLAFGGIVLHRRVQMFDLRQQAMHVFPMLLLSYAAYAAV-HWQ 132 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + E F S V+ +LW + LL++ +R+ Sbjct: 133 VRGYVAWEYFLGSGVSALLWIPMTLLLQALRR 164 >UniRef50_Q7NPY3 Rod shape-determining protein MreD n=2 Tax=Chromobacterium group RepID=Q7NPY3_CHRVO Length = 167 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 80/154 (51%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + R I +F+IA+L++++P P + P+++ L++LYW++ P RVN+G F+MG Sbjct: 11 KPVKRRFILTTFVIAVLIELVPLPHGSTRWLPDFIGLLILYWVINQPRRVNIGIAFLMGI 70 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 I D+ + G LA S+ A+L + + L QQALVV+ L L +I+ L Sbjct: 71 IADVSTAGLFGQHALAYSVTAFLALSRQRQLVMFNLGQQALVVLGLMLTNQLIMVVVRML 130 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + F ++ +LWP + LM +Q Sbjct: 131 TGSAFVGWSYFLPPLIGALLWPLLTKLMLIPYRQ 164 >UniRef50_Q5QWE3 Rod shape-determining protein n=2 Tax=Idiomarina RepID=Q5QWE3_IDILO Length = 161 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 66/156 (42%), Positives = 96/156 (61%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 G + ++++IAL L +MP P FRP+W L++LYWI+ALPHRVN+GT V+G + Sbjct: 5 KPGFITLLITYIIALTLMVMPMPAAFDTFRPDWPTLVMLYWIIALPHRVNMGTALVLGVL 64 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++ GS +GV L M ++ Y A +Q RN AL QQALV+ +L + +VF A + Sbjct: 65 SDILLGSIVGVHALGMVVVTYFAARHFQRIRNFALIQQALVIAVLIFIKRFVVFEANVFL 124 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + F FW + + V W W+F L+RKVR+QF V Sbjct: 125 HDAEFTFSYFWPVLTSAVFWLWVFPLLRKVRRQFGV 160 >UniRef50_B2SMY7 Rod shape-determining protein MreD n=20 Tax=Xanthomonadaceae RepID=B2SMY7_XANOP Length = 161 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 79/152 (51%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R + W++ S IAL+L ++P P + RP W+ L+L YW++ P RV +G FV G Sbjct: 3 RMRNTWILPASIFIALVLGLLPLPTVVQPLRPYWLALVLAYWVIEEPDRVGLGLAFVAGV 62 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + DL+ G LG + L + I+ +++ R + QQAL + L L I+ Sbjct: 63 LADLLYGGLLGEQALRLVIMTFILQRFRARMRFFPMSQQALAIGGLLLNDRIVSSAVHLA 122 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVR 156 V + +W+ ++ VLWP +F+++ VR Sbjct: 123 VGEPTLPWSYWWAPLLGIVLWPPLFVVLDAVR 154 >UniRef50_B7V018 Rod shape-determining protein MreD n=21 Tax=Pseudomonadaceae RepID=B7V018_PSEA8 Length = 164 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 90/161 (55%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 A+ S WVIWLS L+ L+L + P P + RP W+ ++L YW+L LP RV + T ++ Sbjct: 4 ATQGSNNVWVIWLSLLVGLVLAVAPMPTFTEIGRPLWLAMLLTYWVLLLPERVGMVTAWL 63 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G D++ G+ LG L + +I +LV +Q R WQQ LV++++ + ++ W Sbjct: 64 LGLAQDVLYGNLLGQNALILGLITFLVLSLHQRLRMFPAWQQCLVLVVVYGLAQLLQLWL 123 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 L N ++V+ +LWPW++ L++ VR + V+ Sbjct: 124 NALTGNRPPTLTFLLPALVSALLWPWVYALLQFVRLRLNVR 164 >UniRef50_Q07WQ1 Rod shape-determining protein MreD n=21 Tax=Shewanella RepID=Q07WQ1_SHEFN Length = 163 Score = 116 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 108/163 (66%), Gaps = 1/163 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M+++ + GR V+WL+ I ++ QIMP P + +RP+W+L++++YW +ALPHR ++ T + Sbjct: 1 MSAHIANGRLVVWLTLFIGMMFQIMPLPKMVEAWRPDWLLMVMMYWAMALPHRYSILTAW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G +LD++ G+ LG+R LA+S++ Y+V L Q RN WQQ+L+V + ++FW Sbjct: 61 LLGVMLDVLLGAHLGIRSLALSLVIYIVVLLCQQLRNYPRWQQSLLVACFICIYHAVIFW 120 Query: 121 AEF-LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 +F +V F ++F ++ + +W W+F ++R +R+ + V+ Sbjct: 121 VQFVVVGAAPFNVDMFLPAISSLFIWWWVFWVLRNMRRHYKVR 163 >UniRef50_C5BSY4 Rod shape-determining protein MreD n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BSY4_TERTT Length = 163 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 79/161 (49%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + + LS L+ ++P + RP + L++++W++ P ++ + GF+ Sbjct: 3 TPKQRNYALFLGLSIAFGLVFAVLPLTQDFSYLRPELLCLLVIFWVMNSPEQLGMTFGFL 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G + D++ G +A++IIAY+ + YQ R+ ++W Q+L V +L V ++V W Sbjct: 63 VGLLQDVVELGVWGGHAMALTIIAYICLMSYQRIRSYSVWHQSLWVFILVGVHQVVVNWV 122 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + + + +++ + WP + ++R + Q Sbjct: 123 QGIAGYRTPAHYLVLPTLMTALCWPLVVFFFLRIRHLYRTQ 163 >UniRef50_Q0KFF4 Rod shape-determining protein MreD n=12 Tax=Burkholderiales RepID=Q0KFF4_RALEH Length = 170 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 2/154 (1%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R I SF++A L +MPW L + P+ V L+L++W + P +V +G F++G Sbjct: 9 RPVNPAFIAFSFVLAFLFNLMPWGTTL--WVPDMVALVLVFWNIHQPRKVGMGVAFLLGL 66 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 ++D+ LG LA +++AY ++ ++ QAL V+ L VV + Sbjct: 67 LMDVHDARLLGEHALAYTLLAYFAITIHRRVLWFTVYTQALHVLPLLFVVHAVPVLIRLA 126 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + ++ + + +LWP L+ +++ Sbjct: 127 MGAPLPGWQLLLAPAIEALLWPLATSLLLAPQRR 160 >UniRef50_B5JU59 Rod shape-determining protein MreD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JU59_9GAMM Length = 155 Score = 114 bits (287), Expect = 9e-25, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 ++ + ++A++ ++P P+ FRP+ V L+L+YW LA P ++ + TGF MG +LD++ Sbjct: 4 LVTTTLVLAVIFTLVPLPETAAWFRPDIVALVLMYWWLAHPEKIGIYTGFFMGLLLDVMQ 63 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA-EFLVINVS 129 GS LGV + IIA++ YQ R L L QQAL+V + L+ I FW + S Sbjct: 64 GSLLGVHGCGLVIIAWIFLKNYQRIRVLPLVQQALIVFFVLLIKYFIGFWVDNHRIQGFS 123 Query: 130 FRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 F + +LWPW+F+ +R +R++ Sbjct: 124 GTLLYFAPCLTGAILWPWLFVTLRDLRRR 152 >UniRef50_A4BLX4 Rod shape-determining protein MreD n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLX4_9GAMM Length = 134 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 74/133 (55%) Query: 30 NLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVA 89 RP W LIL+YW +ALP RV V + +G + D++ G LG LA S+ A+L Sbjct: 2 WAKPLRPEWTALILIYWCMALPQRVGVTVAWTVGLLQDVLQGFLLGAHALAFSVAAFLTL 61 Query: 90 LKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIF 149 ++ R LWQQAL +LL LV+ +I+ W L+ + + + ++ LWP +F Sbjct: 62 KLHRQIRVFPLWQQALSTLLLLLVIRLILLWTRGLIGHPGVDWQYWLPALTGAALWPPLF 121 Query: 150 LLMRKVRQQFAVQ 162 L +R VR++F V+ Sbjct: 122 LGLRAVRRRFQVR 134 >UniRef50_C0N753 Rod shape-determining protein MreD n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N753_9GAMM Length = 159 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 92/161 (57%), Gaps = 4/161 (2%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + S+ VI L+ ++A+LL ++P P+ FRP WV+L L+YW +ALPHRV++G G++ Sbjct: 3 TTAESRNGVVIILTLIVAMLLMLVPLPETARYFRPEWVVLTLVYWAMALPHRVSIGVGWL 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G ++D+ G TLG+ + + YL+A + R LWQQAL ++ + ++V Sbjct: 63 VGLLMDVTMGGTLGIMAFSYAFAVYLIARFHLQLRQYPLWQQALTILSVV----VVVHLV 118 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + ++ + + +LWP +F +RK+R+ F V Sbjct: 119 SVVTSKSESTWLIWMPVLTSTLLWPVMFATLRKIRRTFQVS 159 >UniRef50_Q60CK4 Rod shape-determining protein MreD n=1 Tax=Methylococcus capsulatus RepID=Q60CK4_METCA Length = 163 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 45/158 (28%), Positives = 92/158 (58%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 + R+ R +I+ S A+ ++I+P P + ++ P+W+LL+L+YW + P RV VGT ++ Sbjct: 4 TRRTPSRILIFASLAAAMAMRIVPLPQDWALWNPDWILLVLIYWAVMAPDRVGVGTAWLT 63 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G + D ++G LG LA S++ Y+ ++ FR ++ QQ L V+LL + ++ W Sbjct: 64 GLLADALTGRLLGQDALAYSVVIYVGVRFHRRFRVYSMVQQVLAVVLLLGLGLLLTLWTR 123 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 + S +++++ G++WPW+ + + +R+++ Sbjct: 124 HIRGLASAPEGYWFAALSGGLVWPWVRVALDGLRRRYG 161 >UniRef50_A4BGL4 Rod shape-determining protein MreD n=1 Tax=Reinekea blandensis MED297 RepID=A4BGL4_9GAMM Length = 161 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 89/162 (54%), Gaps = 1/162 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M G W+I ++F + L +P + RP+WV +++++W+L LP R + F Sbjct: 1 MKQKPPHGLWLIIITFFVGFFLAAIPM-GRFEIARPDWVGMLIIFWVLVLPERFGIFVSF 59 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G + D ++G+TLG+ S +AY V L + R L QQA+VV L+ V I+ W Sbjct: 60 GVGILFDTLAGTTLGLYAFVYSGLAYTVLLLHARLRMYPLGQQAMVVFLILGVTHIVAQW 119 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + +++V W ++ + V+WPW++ L+R ++ +F VQ Sbjct: 120 LKVWLMSVVSGELHIWPALTSAVVWPWVYGLLRTLQIKFRVQ 161 >UniRef50_C4GIM3 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIM3_9NEIS Length = 167 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 83/159 (52%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 Y + +I++SFL+A+L+ +P +L + P + L+L+YWI+ P V++GT F++G Sbjct: 8 YSKIQKRLIYISFLLAILIDFIPLSGSLFHWLPEFTALMLMYWIINRPQNVDIGTAFILG 67 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 ++D+ + ++LG LA I AY+V + QA+V+ L ++I+ + Sbjct: 68 LLMDIGTNASLGGHALAYVIAAYIVIQNRRQIVLYHYGVQAVVIFAALLCSEMILTVVRW 127 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + VF S VV +LWP + +M + + Sbjct: 128 RYTHHFYGWTVFLSPVVGALLWPLLNKIMVSLLNFLNSR 166 >UniRef50_A4A5B4 Rod shape-determining protein MreD n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5B4_9GAMM Length = 161 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 91/160 (56%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 S R WVI S L A +L ++P L+ +RP W+LL+L+YW +ALPHRV + T V+ Sbjct: 2 SERMNAYWVILASLLFAAVLAVIPLTRALLWWRPEWILLVLVYWTIALPHRVGLVTALVV 61 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G +D++ G+ +G +L++S++ L L YQ R L QQ+ V+ LL+ + +I W + Sbjct: 62 GLFVDVMEGAVIGQNMLSLSVVVTLAGLMYQRLRVFTLVQQSSVIFLLAGLHQLITQWLQ 121 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 L + ++ +LWP + L+R++R+ + V Sbjct: 122 GLQGGAVPGFGFLFPALSTALLWPLLMPLLRELRRSYKVH 161 >UniRef50_A0Z7H0 Rod shape-determining protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7H0_9GAMM Length = 160 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 50/156 (32%), Positives = 79/156 (50%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 +G WVI S LIALLL +P P + + P+W LL L YW+LALP+RV V + V+G + Sbjct: 5 RGSWVIVGSILIALLLVAIPVPVSWREYTPDWPLLFLFYWVLALPNRVGVLSACVVGILT 64 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 DL+ GS G + + ++ + YQ R +Q LV+ LL +V ++ E + Sbjct: 65 DLLDGSPAGATAIGAVMAVLVILVSYQRIRQFDGLKQGLVMALLISLVHLVEQRLETFLG 124 Query: 127 NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + V+ + W + +R R+ + VQ Sbjct: 125 WQHSSTAFLMPAAVSFLFWVPVRNCLRFFRRYYEVQ 160 >UniRef50_B8GL91 Rod shape-determining protein MreD n=2 Tax=Thioalkalivibrio RepID=B8GL91_THISH Length = 163 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 57/159 (35%), Positives = 90/159 (56%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 S W I L+F++AL L ++P PD +RP W+ + L+YW +ALP R+ VG G+ + Sbjct: 2 SNPRGWVWAIPLTFIVALALTVVPLPDWAAPWRPQWLAMTLIYWSMALPRRIGVGLGWFL 61 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G +LD +G+ LG L ++IAYL +Q R LWQQAL V L + ++V W Sbjct: 62 GLLLDAATGALLGQHALGFALIAYLSIRMHQRVRVFPLWQQALTVGGLLALHLLLVLWIL 121 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + V + +LWPW+F+L+R VR+++ + Sbjct: 122 GMTGRAPGTWLYWAPLVSSMILWPWLFVLLRDVRRRWCL 160 >UniRef50_C7RML3 Rod shape-determining protein MreD n=3 Tax=Betaproteobacteria RepID=C7RML3_9PROT Length = 173 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 2/153 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 W I + LIALL +P + V P+WV L L++W + P RV +G F+ G Sbjct: 13 PVRPWFIASTLLIALLFNFLPTANWPGV--PDWVALALVFWCVREPRRVGMGLAFLFGLA 70 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ S LG LA ++AY + + L QQAL V L L+V ++ +V Sbjct: 71 MDVADASLLGQHALAYVLVAYGASSLSRRILWFPLGQQALQVFPLLLLVQLVQLGVRTIV 130 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 F + +LWP + ++ + Q Sbjct: 131 GADFPGLAYFVGPCLAALLWPLLTFVLLLPQHQ 163 >UniRef50_B7RTI7 Rod shape-determining protein MreD n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RTI7_9GAMM Length = 162 Score = 111 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 90/162 (55%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M W++ SF AL+L ++P+P L RP WVLL+L+YW++ALP RV + T Sbjct: 1 MVDQGPNAYWLVLASFFCALILAVLPFPHWLAWGRPEWVLLVLVYWVIALPQRVGLITAL 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G +LD++ G+ +G A+ ++ L L YQ R +L QQA +V +L+ + +I W Sbjct: 61 LLGLMLDVVEGAVIGQNAFALVVVTLLALLLYQRLRVFSLAQQAAIVFVLAGLNQMICQW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + L S + + +LWP++ L+R +R+ + V Sbjct: 121 VQNLEGAGSTTLMFLLPAFSSALLWPFVLHLLRGLRRLYGVS 162 >UniRef50_A1WVS1 Rod shape-determining protein MreD n=2 Tax=Ectothiorhodospiraceae RepID=A1WVS1_HALHL Length = 163 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 1/163 (0%) Query: 1 MASYRSQ-GRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTG 59 M +R + G +I LSF+IAL+L I+P P FRP W LILLYW LALP RV VG G Sbjct: 1 MTGHRPRNGGGIILLSFIIALMLTIVPMPGWAQEFRPEWTALILLYWGLALPERVGVGVG 60 Query: 60 FVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVF 119 +++G D + G+ LG LA ++IA+L +Q R + +WQQA+VV+ L +V ++VF Sbjct: 61 WLVGLFQDALLGTLLGQHALAFALIAFLALRLHQHLRLVPVWQQAVVVLGLLVVAQLVVF 120 Query: 120 WAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 W ++ + + + + +V +WP +F +MR VR++F VQ Sbjct: 121 WINGIIGRPAPEWQAWAAILVGAAIWPLVFHIMRGVRRRFQVQ 163 >UniRef50_Q1QVB9 Rod shape-determining protein MreD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVB9_CHRSD Length = 159 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 95/157 (60%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R G IWL+ +I+L LQ+MP PD +++RPNW+ L L YW + P RV V GFV G Sbjct: 2 RLPGLIAIWLTLVISLCLQVMPLPDAWLMWRPNWLGLALAYWCVTAPQRVGVFHGFVCGL 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 +LDLI G+ LG L +S++ YL L YQ R ++WQQA+++ +L ++ ++ W + Sbjct: 62 LLDLIEGTPLGQNALTLSLLTYLCLLLYQRLRAYSIWQQAVMLFVLLGLIQLVEQWLRTI 121 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 VS +++ G LWPW+F +M+ +R++ + Sbjct: 122 FGPVSIHLAFLLPALIGGALWPWLFTMMQVLRRRLGI 158 >UniRef50_A9N8Z0 Rod shape-determining protein MreD n=7 Tax=Coxiella burnetii RepID=A9N8Z0_COXBR Length = 162 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 90/161 (55%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M ++ I L+ ++A++L I+P P + ++P W+ ++LL+W++ALP+RV +G F Sbjct: 1 MEGNYAKDVLAIGLTLIMAMMLTILPLPAWAVWYQPAWIFMVLLFWMIALPYRVGIGAAF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 + G + DL+SG+ LG L +IIAY + R+L WQQ ++V + + V + +W Sbjct: 61 IWGLLFDLLSGTILGQHALIFTIIAYFIIRFQTPLRSLPNWQQMILVFIATAVYLALQYW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + + + +LWPW+ +L++ + +F + Sbjct: 121 IMAMADASPETAKYWLPLMSTTLLWPWVRVLLKDYQSRFRL 161 >UniRef50_C0DXR0 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXR0_EIKCO Length = 167 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 73/159 (45%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 S + + SFL+ LL+ +P P++ L++L YW+L P + +G F +G Sbjct: 8 KESTPKRWVAFSFLLVLLIDFIPVAPPWAYPLPDFTLIMLAYWLLHRPQLIGIGVAFCLG 67 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 ++D+ S S LG LA S+ A+L+ + + QA+ V LV ++VF Sbjct: 68 LLVDIGSNSLLGQHGLAYSVAAFLIERNRRQIVLNSFGWQAVAVAGAMLVSQLVVFLVSL 127 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 ++ S+V G+LWP + +M + + Sbjct: 128 FQQQPFPLWRLWLPSIVTGLLWPQLNNVMLAIAHYRRPR 166 >UniRef50_B8KR95 Rod shape-determining protein MreD n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR95_9GAMM Length = 160 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 82/158 (51%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 R+Q WVI ++ ++ALLL P P FRP LL+L YW+LALP RV + + V+G Sbjct: 2 ERAQAVWVIPVTLMVALLLHAAPLPFEWRWFRPELPLLVLFYWVLALPQRVGLLSAAVIG 61 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 +DL+ GS LG L + + ++ YQ R L+QQ L++ LL + + W Sbjct: 62 IGIDLLEGSALGGLALGLVVSTLVLLFTYQRIRQFNLFQQCLLMGLLIALALTVENWVHK 121 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + + W ++V+ W I +R +R+ + V Sbjct: 122 FMALPTGGMQFLWPALVSMPFWAVIRKPLRGLRRYYGV 159 >UniRef50_B3PC04 Putative rod shape-determining protein MreD n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC04_CELJU Length = 161 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 68/140 (48%) Query: 23 QIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMS 82 + P P +RP +VL++ +YW+L +P V++ V+G DL+ G L + Sbjct: 22 SVYPLPFIWQWWRPEFVLVVAIYWMLNMPQSVSLVFLCVLGLFQDLLESVPFGQHSLGLI 81 Query: 83 IIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNG 142 I+AY+ L YQ RN W+QA V +L + + W + + + +V + Sbjct: 82 IVAYICFLSYQRVRNFPRWKQAGWVFVLVGIAQLTDNWVQSMAGRQLSGVAFLYPAVTSA 141 Query: 143 VLWPWIFLLMRKVRQQFAVQ 162 + WP+ + + ++ Q++ + Sbjct: 142 IFWPFCCVWLDRLCQRYQLH 161 >UniRef50_A1U482 Rod shape-determining protein MreD n=3 Tax=Marinobacter RepID=A1U482_MARAV Length = 158 Score = 109 bits (272), Expect = 5e-23, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 80/150 (53%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 + ++ +++L+L I +P + FRP W+ LI+ YW P + + + +G +LD++ Sbjct: 9 LFAITVVLSLVLSISLFPVDWFQFRPEWLGLIVFYWTFRAPAQFGILMAWCLGLLLDILE 68 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 + LGV + M++IA+LV +Q R L QQ L+V LL + ++V + + L+ S Sbjct: 69 STPLGVNAMGMALIAFLVLTIHQRLRMYPLPQQCLMVFLLLGINQMLVHFVKQLLGAESA 128 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 W ++ + + WP + ++ + ++ Sbjct: 129 GFSYLWPALTSALAWPVVSGVLDTINRKLG 158 >UniRef50_Q21FT2 Rod shape-determining protein MreD n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FT2_SACD2 Length = 162 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 68/148 (45%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + +S AL+L I P P RP L+++YW++ P V T + Sbjct: 1 MPNLGLSFYIFFCVSAFFALVLSIYPIPHAYAALRPELFCLLVVYWVINYPQYFGVTTAW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +MG LD++ + G L ++ +AY+ YQ R+ +LWQQ L V + + +IV W Sbjct: 61 LMGLFLDVVHSTVWGAHALGLAAVAYICLSSYQRIRSYSLWQQTLWVFVFVGIHQVIVNW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWI 148 L + ++ V+ + WP + Sbjct: 121 MLGLSGYHKPTHIILVTTAVSALSWPVM 148 >UniRef50_A9I0I9 Rod shape-determining protein MreD n=5 Tax=Bordetella RepID=A9I0I9_BORPD Length = 187 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 67/153 (43%), Gaps = 2/153 (1%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R +W + L+A LL ++PW + P+ + L+L +W + P RV + F G Sbjct: 27 RPAHGAFVWGTLLLAWLLSLLPW--RVWEGAPDILALVLAFWCVHEPRRVGLVAAFCFGV 84 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 ++D+ S LG L+ ++ AY ++ + LW QA+ ++ + + ++ Sbjct: 85 LMDVHDASVLGGHALSYTLTAYGAVALHRRLQRFDLWSQAMHMLPVFFLARLVQQMVLAW 144 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + + ++ +WP ++ ++ Sbjct: 145 LAGKWPGWDWTLGVLLTVAIWPLAGWVLHLPQR 177 >UniRef50_C5V1V9 Rod shape-determining protein MreD n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1V9_9PROT Length = 170 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 1/153 (0%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R I S + ALLL +PW + P++V ++LLYW P R+ VG + +G Sbjct: 13 RPVSTMFIVTSIVTALLLNGLPWGGLWLTLHPDFVAVVLLYWCTHKPLRIGVGLSWAIGI 72 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + D+ S G LA +++A+ + + R L +Q V+++ + + Sbjct: 73 LADVGDASLFGQHALAYTLLAFGGVVLSRRIRMFDLREQTTQVLVILFSTYAVYALVQ-W 131 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 +N F + + +LW + L + +RQ Sbjct: 132 QVNGQIVWTYFLGCLTSTLLWVPMSSLFQSMRQ 164 >UniRef50_Q21RI3 Rod shape-determining protein MreD n=66 Tax=Burkholderiales RepID=Q21RI3_RHOFD Length = 176 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 71/155 (45%), Gaps = 2/155 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNL--IVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 + IW S + ALLL ++ + P+ + L+L++W + P R+ +G FV G Sbjct: 12 PANPFFIWGSLVAALLLNMLQNMGLWGRAAWMPDLLALVLVFWSIHQPQRIGIGAAFVFG 71 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 +D+ G+ LG L+ +++++L ++ + QA V+ L + I Sbjct: 72 IFVDVHQGAMLGQHALSYTVLSFLAIAIHRRLLWFPVPSQAFQVLPLFVAAHAIALSVRM 131 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 L + + ++ +LWP + +L+ +++ Sbjct: 132 LAGGGFPGFWLLLAPLIESLLWPVVSVLLLMPQRR 166 >UniRef50_C1D5N3 MreD n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5N3_LARHH Length = 168 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 1/153 (0%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R + I LS +AL+++++P P++V L++LYW + P R +G F++G Sbjct: 9 RPVRKRWIALSLALALVVELLPLSGPAR-LTPDFVALLVLYWNINQPSRFGIGLSFLVGL 67 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 I D S +G LA ++I+YLV L+ + +L QQAL+V+ L L+ I++ A Sbjct: 68 IGDFFSAGLIGQHALAYTVISYLVLLRQRQIAMYSLGQQALIVLGLLLLSQAIMWLARMA 127 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + V F S V +LWP + ++ ++ Sbjct: 128 LGGVVVGWSYFMSPFVGALLWPLLTTILLWPQR 160 >UniRef50_Q1GYC9 Rod shape-determining protein MreD n=3 Tax=Methylophilaceae RepID=Q1GYC9_METFK Length = 159 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 47/139 (33%), Positives = 72/139 (51%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 ++LS L+ALL+QI+PW +L+ RP ++LL +LYW L PH N+GT + G ++DL SG Sbjct: 9 VYLSLLVALLMQILPWSGSLLTIRPEFLLLTVLYWTLRAPHLCNIGTAWFAGLMMDLASG 68 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 G LA S ++ + +WQQA V LL L+ +I + Sbjct: 69 GLFGQFALAYSAASFFAVSYQRRLALFNIWQQAGYVFLLLLLSQVITLVLKLFSGGELPG 128 Query: 132 PEVFWSSVVNGVLWPWIFL 150 + F SV +LW ++ Sbjct: 129 WQYFLPSVSGILLWQFVTF 147 >UniRef50_C7I0H6 Rod shape-determining protein MreD n=4 Tax=Burkholderiales RepID=C7I0H6_THIIN Length = 178 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 2/153 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 W I LS L+ALL+ +P + P+ V L L++W + P RV + FV+G Sbjct: 18 PVNPWFIALSLLMALLIDFLPLGRLA--WMPDMVALTLVFWNVHQPRRVGMAVAFVLGLA 75 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ GS LG L ++++Y ++ A QQAL V+ L + +++ Sbjct: 76 VDVQQGSVLGQHALIYTVLSYFAITLHRRLLWFAPLQQALHVLPLFVATQVLLLLVGMWA 135 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + V LWP + L+ +++ Sbjct: 136 GGSFPGWAFLLAPFVQAALWPLLSWLLLAPQRR 168 >UniRef50_Q0VS68 Rod shape-determining protein MreD n=2 Tax=Alcanivorax RepID=Q0VS68_ALCBS Length = 163 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 1/163 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M S R G VI ++ L+A LL+++P P ++ RP W+LL+L+YW+L LPHR+ V GF Sbjct: 1 MVSDRPAGTGVIIVTLLLAALLEVIPLPASIDWIRPEWMLLVLVYWVLVLPHRIGVLWGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G D++ G+TLG LA ++ A+++ Y+ R QQ V+ LL V ++ F Sbjct: 61 FVGLYHDVLVGTTLGQWGLATALGAFVMLAAYKRMRVFNGLQQCAVIFLLVGTVSLLAFL 120 Query: 121 AEFLVINVS-FRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + V + +SSV + ++W + ++R ++ +F V+ Sbjct: 121 VQESVGRTLYPPYTILYSSVSSALVWRPVCAVLRWIQLRFLVR 163 >UniRef50_A1K1T9 Rod shape-determining protein n=4 Tax=Rhodocyclaceae RepID=A1K1T9_AZOSB Length = 173 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 2/151 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 I+ S ++AL L +P V P+WV L+L +W + P R+ +G GF+ G + Sbjct: 13 PVRLGFIYFSLMVALALAYVPTGRFPGV--PDWVALVLAFWCIREPLRIGMGAGFLFGVL 70 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ G+ +G LA ++AYL + QAL V+ + L +++ + Sbjct: 71 VDIGQGAAMGQHALAYVVLAYLATGLARRVMWFPPLLQALHVLPMLLASQMLMVAVRLIA 130 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVR 156 F SS LW + L+ + Sbjct: 131 GAEFPGWAYFLSSFTAVALWVPLNYLLLLPQ 161 >UniRef50_Q1ZG63 Hypothetical rod shape-determining protein MreD n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZG63_9GAMM Length = 157 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 91/156 (58%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +I+++F +ALL I P P L FRP+W++LI+ YW+LA P R+ + F +G I Sbjct: 1 MRHYSIIYITFFVALLCAIFPLPIFLNAFRPDWMILIIFYWVLATPQRIGIVHAFFIGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LD++ GS LG+ L S++AY V + +Q R L Q L++ + +L + + ++W Sbjct: 61 LDILLGSMLGMHALLFSLLAYFVCVDFQRIRYFTLVQTTLLIGIAALCIKLSLYWIASTQ 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 ++ FWS + ++WPW FL +R VR +F V Sbjct: 121 QDILLHKSYFWSIFSSMLIWPWFFLFLRMVRIRFKV 156 >UniRef50_B5F9L8 Rod shape-determining protein MreD n=89 Tax=Gammaproteobacteria RepID=B5F9L8_VIBFM Length = 163 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 85/161 (52%), Positives = 120/161 (74%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 +S+ +GR +IWLSFLIAL LQ PWP L V RP+W++L+ YW+LALPHRVNVGT V Sbjct: 3 SSHLMRGRVIIWLSFLIALTLQAAPWPGALEVLRPSWIILVTFYWVLALPHRVNVGTAMV 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G + DL+ G+TLG+R + M+I+ YLVA +++ RNLALWQQA + L+L+ I+ F Sbjct: 63 LGILWDLLLGTTLGIRGMTMAILVYLVAANFKVLRNLALWQQAAIFSGLTLLGKILEFMG 122 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 EFLV +VSF W+ V+N +LWPW+FLLMR+VR+ ++++ Sbjct: 123 EFLVHDVSFNAHFLWAGVLNFLLWPWLFLLMRRVRRHWSIR 163 >UniRef50_Q1MYL6 Rod shape-determining protein MreD n=1 Tax=Bermanella marisrubri RepID=Q1MYL6_9GAMM Length = 155 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 1/155 (0%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 VI +F +A +L ++P+P + RP WV + L++W + P R + GF MG + Sbjct: 1 MNAYAVILPTFFLAFVLSVLPFPRLIDFIRPEWVAMTLIFWCVLSPGRAGIFLGFFMGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++ G LG LA+S++ YL AL R QQ+ +V ++ + ++ FW E L+ Sbjct: 61 FDVLHGQLLGQSALALSVLGYLCALMQSRMRIYNPLQQSFMVFVMVGLYLLMSFWIESLM 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 V + + W SV + ++WP + L+ +RQ F Sbjct: 121 G-VDRKTALLWPSVGSALIWPLWYNLLFAIRQFFR 154 >UniRef50_Q7VRC2 Rod shape-determining protein MreD n=2 Tax=Candidatus Blochmannia RepID=Q7VRC2_BLOFL Length = 162 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 104/150 (69%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 I+ SF +A++LQ + + +P+W +++L+YWI+ +P+++N+GTGF +G ILD IS Sbjct: 12 IYCSFAVAIILQYVLFFSITWYLQPSWTMMLLIYWIVLIPNKINIGTGFFLGLILDCISC 71 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 STLG++ L+MSII+YL K LFR+ +WQQ++ ++L S + I F +FL+ +VS+ Sbjct: 72 STLGIQTLSMSIISYLTIRKIYLFRHTYVWQQSIFIVLFSFINQNIKFLIQFLMFSVSYS 131 Query: 132 PEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 P++F++ +++G++WP + L+ K+ + Sbjct: 132 PKIFYNCILDGIMWPVLIFLIHKINNSSKI 161 >UniRef50_C5TMH6 Rod shape-determining protein MreD n=5 Tax=Neisseria RepID=C5TMH6_NEIFL Length = 181 Score = 94.9 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 74/160 (46%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 SYR+ ++ S ++ ++L MP+ + + P L+LLYW L P R +G F + Sbjct: 22 SYRAVPLHIMAASLIVMMILDFMPFSFDGFFWLPEMTALMLLYWTLHQPQRAGMGLAFAI 81 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G I+D + +TLG+ L+ ++ Y + + + Q V+ L+ ++ A Sbjct: 82 GLIVDAATAATLGLHALSYVVMTYFILNRRRQIMLYGHIMQLAAVLAALLLNQAVLTVAR 141 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + + F + V +LWP + LM V + + + Sbjct: 142 LFLNHQVITLQGFVAPFVGALLWPILSQLMLIVTRIYRSR 181 >UniRef50_A4T0H0 Rod shape-determining protein MreD n=2 Tax=Polynucleobacter necessarius RepID=A4T0H0_POLSQ Length = 174 Score = 93.3 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 76/156 (48%), Gaps = 4/156 (2%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R I+ S ALLL ++P + + P+W+++ +++W + V+V T F++G Sbjct: 11 RPVNPVFIYFSLFCALLLNLLPIGNY--GWVPDWLIICMVFWNIHQHRYVSVITAFILGL 68 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 ++D+ + LG+ + S++AY+ ++ L + QA+ ++ + L+V + + Sbjct: 69 MMDVHNSDLLGLHAFSYSLVAYVAISWHRRIVALTVLSQAVHLLPVFLLVALFPVLVHWA 128 Query: 125 VINVSFRPEVF--WSSVVNGVLWPWIFLLMRKVRQQ 158 + + + + + +LWP ++ +++ Sbjct: 129 LSGELYWWALTGAVQAFIEAMLWPLATRILLAPQRR 164 >UniRef50_UPI00016994A6 Rod shape-determining protein MreD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016994A6 Length = 106 Score = 91.4 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 42/98 (42%), Positives = 61/98 (62%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + ++ L+ +L +MP PD FRP WV LIL+YW +ALP RVNVGTG+ Sbjct: 1 MNANVQGRLYIAHLTLAFGFVLAVMPMPDWASNFRPQWVTLILIYWCMALPERVNVGTGW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNL 98 + G +LD++SGS LG LA++++++L YQ R L Sbjct: 61 LAGLLLDVLSGSMLGQHALALAVVSFLTLNIYQRVRVL 98 >UniRef50_Q2SBH0 Cell shape-determining protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SBH0_HAHCH Length = 157 Score = 91.4 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 73/149 (48%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 + + +A + ++P FRP + +++ YW L P + G+ +G + D+ Sbjct: 8 PVLFVFTLFLAFCVSLIPLGGFAAYFRPESICMVMFYWTLKHPGACGILVGWCVGLLWDV 67 Query: 69 ISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINV 128 + GSTLGV LA+++ AYLV Q + L QQ+ VV ++ +V ++ W L+ Sbjct: 68 LMGSTLGVHALALALQAYLVLKMLQRLQMFPLIQQSFVVFIIVGIVLMLFRWINGLLAQP 127 Query: 129 SFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + ++ + +LWP LLM K+ Sbjct: 128 ATDMAYLLGALSSALLWPLFSLLMEKLEN 156 >UniRef50_Q8D1V7 MreD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D1V7_WIGBR Length = 168 Score = 90.6 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 97/161 (60%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M ++I+ FLI+L+LQI+ WP N + +P+WV +I +L P ++N+GTGF Sbjct: 1 MNKLNLIRIFIIYSLFLISLILQIISWPQNFNLLKPSWVYIIFSCLLLIYPEKINIGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G ILDL GSTLG+ +++S +AYL+ + + F +L++Q+L + +V + + Sbjct: 61 ILGLILDLHLGSTLGMHSISISFLAYLILINIKYFYKTSLFKQSLYISFFISIVKLSILI 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + ++ N + F + +++ ++WPWIF L++ + F V Sbjct: 121 IQLVISNTLLQINFFENILIDIIMWPWIFSLIKNILCYFNV 161 >UniRef50_A8PNB8 Rod shape-determining protein MreD n=1 Tax=Rickettsiella grylli RepID=A8PNB8_9COXI Length = 161 Score = 89.8 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 81/153 (52%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + +SF A+LL I+P P +F P W+ L+L+YWI+ LP ++ + Sbjct: 1 MRPLYFSTLCFMVISFSGAILLNILPLPPMFALFFPLWLPLVLIYWIMVLPGHIHFTLAW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G +D++ GS LG LA+ ++AYL + FR + QQ L V ++ ++ I+ Sbjct: 61 LLGLFIDVLYGSYLGEHSLALCVVAYLAYRFHLQFRMFPVPQQMLFVFVMLIIYQTILIV 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMR 153 + + V V+ S +++ ++WP I L+R Sbjct: 121 TQAWLGFVIDFRWVWISLLMSALIWPLITYLLR 153 >UniRef50_B0VS17 Rod shape-determining protein n=17 Tax=Acinetobacter RepID=B0VS17_ACIBS Length = 163 Score = 89.8 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 2/154 (1%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 R W I LS ++ +L I P ++ +RP ++L+I+L+W++ P V F MG Sbjct: 10 KRKDPLWGIILSIIVGSVLMIYPLSYDISGWRPLFMLMIMLFWVVCQPTWCGVWFAFGMG 69 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 DL+ + LG+ L+ I+ ++ + R L + L ++ + W Sbjct: 70 IFTDLLLDAPLGLNALSFVIVTFITRFLIRERRILTFGN-LWTIATLVIIAHLAFMWVTQ 128 Query: 124 LVINVSFRPEVFWSSVVNGVL-WPWIFLLMRKVR 156 + + F W ++ +L WP ++ + K R Sbjct: 129 TMGGIHFSIARHWQPLMTSILTWPVVYYCLAKWR 162 >UniRef50_Q3SM35 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SM35_THIDA Length = 166 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 68/145 (46%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 I S +A+L++ +PW +V RP++VL+ LL+W+L P RV G F +G I D G Sbjct: 14 ILGSLTLAVLVEQLPWSGLAMVLRPDFVLVALLFWVLHQPQRVGFGIAFFLGLIADFQDG 73 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + LG +A + YLV ++QA + + L V ++V +L +N Sbjct: 74 AALGQHGIAYVVGVYLVLYLRLRLLQFDPFRQAAQLFPVLLAVQLVVLLGGWLAVNPPAG 133 Query: 132 PEVFWSSVVNGVLWPWIFLLMRKVR 156 + + LW L++R Sbjct: 134 LAILMPVFGSTFLWYLSALVLRLWH 158 >UniRef50_A1STZ6 Rod shape-determining protein MreD n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STZ6_PSYIN Length = 133 Score = 88.7 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 83/132 (62%) Query: 30 NLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVA 89 L FRP+W++LI+ YW+LALPHRV++ F++G + DL+ GSTLG+ L S +AY+V Sbjct: 1 MLNAFRPDWMILIIFYWVLALPHRVSIVHAFILGVVFDLLLGSTLGMHALLFSFLAYIVI 60 Query: 90 LKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIF 149 YQLFR L Q L+V L SL+ + ++ + ++ FWS + ++WPW F Sbjct: 61 TNYQLFRYFTLVQTTLLVGLYSLLSKLALYLMASSLQDIILHQSYFWSVFTSMLVWPWFF 120 Query: 150 LLMRKVRQQFAV 161 L +R +R++F V Sbjct: 121 LFLRFIRRRFKV 132 >UniRef50_D0L063 Rod shape-determining protein MreD n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L063_HALNC Length = 155 Score = 87.5 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 73/149 (48%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 +I LS L+AL+L + P + P W+LL +LYW + P+ V + ++ G +LD+ S Sbjct: 7 MIPLSLLVALILTVEPSVPLYQHYSPQWLLLTVLYWCIREPNSVGLIVAWMSGLVLDVAS 66 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 LG L ++ A +V Q+ QQAL V LS + ++ W + + +++ Sbjct: 67 VGLLGANALLFTLSAAVVLGLRQMLFFTGPVQQALFVAGLSAIYLLLSLWMQGGISDLTM 126 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 N V WP I ++ +R+++ Sbjct: 127 LLHNLVRVASNLVAWPIILMVFHLLRRRY 155 >UniRef50_P44476 Rod shape-determining protein mreD n=32 Tax=Pasteurellaceae RepID=MRED_HAEIN Length = 162 Score = 87.1 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 61/153 (39%), Positives = 102/153 (66%) Query: 10 WVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI 69 + I F+IA +L++ PWP + +P W++L+LLYW+LA+P++V++G F++G DLI Sbjct: 10 FTILSFFVIAFVLELAPWPVGFQMLKPAWLVLVLLYWVLAIPNKVSIGWSFLLGLTWDLI 69 Query: 70 SGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVS 129 GSTLGV L +S Y++A Y + RNL+LW Q+L+V+L ++ +++F EF + Sbjct: 70 LGSTLGVHALVLSTSMYIIAKNYLILRNLSLWFQSLLVVLFVFIIRLLIFLVEFSLHTAF 129 Query: 130 FRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 F + + +G+LWPW+FLLMRK+R++ + Sbjct: 130 FHWQAILGAFASGLLWPWVFLLMRKIRRKVKLH 162 >UniRef50_Q1YU27 Rod shape-determining protein MreD n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YU27_9GAMM Length = 158 Score = 86.4 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 79/152 (51%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 + L+ ++A++L +MP + IV++PN++LL ++ W++ P V + +G + Sbjct: 5 NRGIAVCLTLILAVVLSLMPLSGDWIVWKPNFLLLTVMAWVMRWPDGVGIFFAASVGLLA 64 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 D++ + G V+ ++ A+ +AL + + L++ Q+ L+V L+ +V + Sbjct: 65 DILLRMSPGHSVIVFALCAFALALVSRWAKYLSMLQRTLLVALIISLVAMFEASLFIFYG 124 Query: 127 NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 S + +++ + WP+I L+ +++ + Sbjct: 125 RPSGIEYLPMKILLSMLAWPFIDRLVARMQPR 156 >UniRef50_B5EMQ8 Rod shape-determining protein MreD n=3 Tax=Acidithiobacillus RepID=B5EMQ8_ACIF5 Length = 158 Score = 86.0 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 74/152 (48%) Query: 10 WVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI 69 V+ L F AL+ + +P P++V L+LLYW ++ ++ +++G + D++ Sbjct: 4 VVVVLGFFFALVAEAIPCGPFYASLHPDFVALLLLYWAISSASELSFTVVWLIGLLQDMV 63 Query: 70 SGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVS 129 G LG + +A ++ YL+ R+LA W+Q + +L L ++V+ + ++ Sbjct: 64 LGDVLGAQAIAGVVMIYLLYTGIARVRSLASWEQLFFIFMLLLAHRLLVWSWQAWAGTIT 123 Query: 130 FRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + ++ +LWP L + +R + Sbjct: 124 WHFSLLLGPLIGALLWPLFTLTLDYLRHALRL 155 >UniRef50_Q31F49 Rod shape-determining protein MreD n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31F49_THICR Length = 167 Score = 84.1 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 74/153 (48%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 S +W++ S+ I++++ M I F P + LLILL+W + ++ ++ + F +G + Sbjct: 11 SDIKWLLIFSYFISVVIDSMMILSFNINFVPYFTLLILLFWSTQILNQTHLFSAFALGLL 70 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D + LG L I +L+ F+ LWQQ+++V ++ + ++ V Sbjct: 71 FDASMNTPLGSHSLIFVTITFLMLRSRLRFKGYPLWQQSMIVGSYFIIFQAMSWFIFHPV 130 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + + + ++ ++WP + +M ++ + Sbjct: 131 LVGNALLYYWIEPLLAILIWPVLTQVMHRLTHR 163 >UniRef50_A5WCI6 Putative uncharacterized protein n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WCI6_PSYWF Length = 162 Score = 82.9 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 1/149 (0%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 + SF+ A ++ I P + RP ++++L++W++ P V V T F +G I DL+ Sbjct: 15 VIASFVAASVVNIYPLSLDASKLRPMALIMVLIFWLIYKPRYVGVVTAFAIGIISDLLLD 74 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + LG + A I+A+ + Q + + L A V +L+V + W + F Sbjct: 75 TRLGQQGFAAVIMAFSLRFVGQYIKQVNLP-VAWTVATGALIVFQLTLWIVQYLTQNIFY 133 Query: 132 PEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 +S +V+ + WP +F + + +++ Sbjct: 134 ASAIFSLLVSVISWPLVFFGLHRFINKYS 162 >UniRef50_A5IGA1 Rod shape determining protein MreD n=5 Tax=Legionella RepID=A5IGA1_LEGPC Length = 159 Score = 82.5 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 74/138 (53%) Query: 14 LSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGST 73 L FL+AL L I+P P+ + +FRP WVLL++LY LP + + + G +LD++ + Sbjct: 10 LGFLVALALSILPMPELISIFRPPWVLLLVLYIEYYLPGKFKLTALLIAGLLLDVLLSTV 69 Query: 74 LGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPE 133 +G A+ ++ ++ + K + + +L QQ ++ + I+ + + L+ Sbjct: 70 IGEHSFALLLVTWIASTKSRRVQFFSLIQQVCLIGFFCFLYQSIIIFIDALLGFNYNLIM 129 Query: 134 VFWSSVVNGVLWPWIFLL 151 S+++ ++WPWI +L Sbjct: 130 PVASAILGMIIWPWIRVL 147 >UniRef50_C8PVZ5 Rod shape-determining protein MreD n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVZ5_9GAMM Length = 161 Score = 81.4 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 1/156 (0%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + V+ +SF+IA +L + P + +FRP W++++L++W++ P + +G FV Sbjct: 7 KKTKQHLYIVMAISFIIASVLSVYPLSAEIALFRPMWMIMMLIFWLIFQPTLIGIGLAFV 66 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G DL++ S +G + L ++A+ + R L+ ++ L++ + Sbjct: 67 VGLFADLLTDSRIGQQALCAVLVAFFIKFVSGYLRQLS-SNLVWLLAGACLLIYQLGLIF 125 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 L F P++ ++ V+ ++WP + +M + + Sbjct: 126 LHLFTQGVFAPQLLYTVAVSTLIWPLLVAVMLRYTR 161 >UniRef50_Q1QDJ0 Rod shape-determining protein MreD n=2 Tax=Psychrobacter RepID=Q1QDJ0_PSYCK Length = 161 Score = 81.0 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 1/147 (0%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 VI LSF+IA L + P ++ RP ++++L++W+L P V + + F +G I DL+ Sbjct: 16 VIVLSFIIASSLSVYPLSPSMATLRPMIMIMVLIFWLLFQPRYVGIFSAFAIGLIADLLM 75 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 + LG + + +A ++ + R L A ++ L L + W + + F Sbjct: 76 DTHLGQQAFSAVAVALMIKVTSIYIRQLNTIS-AWIIASLGLFIFQASLWMLQMFVQDVF 134 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + +S +++ + WP + L +RK + Sbjct: 135 VAQSTFSLLMSIISWPLVLLTLRKFVR 161 >UniRef50_A0L7I2 Rod shape-determining protein MreD n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7I2_MAGSM Length = 171 Score = 80.2 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 2/153 (1%) Query: 9 RWVIWLSFLIALLLQIMPWP-DNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILD 67 W+ LS ++A+ +Q + P VFRP+ +L+ L YW L P R G+ F G +D Sbjct: 10 PWLPLLSLMLAVAVQEVALPYQAWSVFRPDLLLVALFYWRLYRPDRCGPGSAFGAGVAVD 69 Query: 68 LISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVIN 127 L+SG +G+ L+ +I L+ R ++ LLSL+ +I LV Sbjct: 70 LLSGGPMGINALSKILITLLIRRFGPRLRATDAIFLVPILALLSLLDQMIQLGLATLVQG 129 Query: 128 VSFRPEVFWSSVVN-GVLWPWIFLLMRKVRQQF 159 R + VV+ ++ P + + + + + Sbjct: 130 WGVRWPLLLGRVVSTALVAPLVVGALIHIHRIW 162 >UniRef50_Q1LU39 Rod shape-determining protein MreD n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LU39_BAUCH Length = 158 Score = 77.1 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 99/156 (63%), Gaps = 1/156 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDN-LIVFRPNWVLLILLYWILALPHRVNVGTG 59 M + Q WVIWL F +++ + + + +F P+W+ L+L+YW++ +R++VG Sbjct: 1 MTRFYRQYNWVIWLFFFFIIIILPIIPCNKPINLFWPSWLNLLLIYWVMVRQNRIHVGIV 60 Query: 60 FVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVF 119 F++ I+DLI GS LG+ L +SII Y+V +K + FRN ++QQ ++++L S + IV Sbjct: 61 FLISIIVDLIRGSKLGIHPLLISIIIYIVFIKIKFFRNKNIYQQVIIIILASAIAKFIVN 120 Query: 120 WAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKV 155 +L+++ S++ + SS+V+G+ WP + +MRK+ Sbjct: 121 ITNYLLLSNSWQTGILSSSIVDGIAWPLVLCIMRKI 156 >UniRef50_A5CW44 Rod shape-determining protein MreD n=3 Tax=Gammaproteobacteria RepID=A5CW44_VESOH Length = 156 Score = 76.7 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 1/154 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M R +++ ++F AL+L ++P L+ W+LL+ +YWI+ ++ Sbjct: 1 MNVQRRPYIFLMKITFF-ALILSVIPLNKLLLGASAFWLLLLYIYWIVYFSTKLKFFIAL 59 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G ++D++ G LG LA+ + ++ Q F L Q + + + S + + Sbjct: 60 ILGTLVDILHGDILGQNALALIFSSLFISNIKQSFFLSNLSTQQVYIFISSSIYLVFFLL 119 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRK 154 L +F + + +WP + L+ K Sbjct: 120 IFVLTQGFIINYYLFLAPFTSAFIWPVVQFLLSK 153 >UniRef50_B0SG26 Cell shape-determining protein n=6 Tax=Leptospira RepID=B0SG26_LEPBA Length = 171 Score = 73.7 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 60/159 (37%), Gaps = 10/159 (6%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 + I + L+A L + RP+++++ ++++ L + GF G + D Sbjct: 5 KVFIIIGLLLAHFLNGSNVFELGNAIRPDFMVIFVVFFALRKGPMYGLWLGFFGGLLTDT 64 Query: 69 ISGS----------TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIV 118 G +G+ + +I+ Y+V + + ++ L+ V +I Sbjct: 65 ALGGEIGGDNLVYYKIGLHSFSYAIVGYIVGKGLRSSYTENYISITIYILGLTFVSRLIT 124 Query: 119 FWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + + + + + S+ N L P +F L + Sbjct: 125 YLLFLMFFHSNHSYSFLYVSLYNAFLGPALFFLFSWAYR 163 >UniRef50_C8PRS7 Rod shape-determining protein MreD n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRS7_9SPIO Length = 166 Score = 65.6 bits (159), Expect = 6e-10, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 5/163 (3%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R W I +FL+ + + + P+ +L++++Y L V GF G Sbjct: 2 RKVVLWTIAAAFLLGIFETAILSHIRFLPALPDLILILVVYIALHNGTVAGVTAGFFSGL 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 I D +S + +G+ +++ +L L Y+ + + ++ + + + I+F L Sbjct: 62 IFDFLSLAPMGLHSFVFTVLGFLYGLLYRKYNVRRFFFPFILGLSATFLKAGILFILNIL 121 Query: 125 VIN-----VSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + N V P +F+L+ F ++ Sbjct: 122 FGQSIQVYNLLALSFWIEAAGNAVCAPLLFMLLGLFPNAFEIK 164 >UniRef50_Q73N05 Rod shape-determining protein MreD n=1 Tax=Treponema denticola RepID=Q73N05_TREDE Length = 172 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 52/131 (39%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + W F I LL + + P+ VLL ++Y ++ + GF+ G Sbjct: 2 KKVILWTSLSVFFITLLQTAIFSHISFFTVLPDLVLLTVIYIAISNGSLTGLICGFIAGL 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + D +S + +G+ ++ YLV Y ++ + ++ L + +++F + L Sbjct: 62 LADFLSAAPIGLHSFIFTLTGYLVGKFYGIYNLNKVIFPCILGGLGFVFKVLLLFVLKIL 121 Query: 125 VINVSFRPEVF 135 +F Sbjct: 122 FGQNIHTYNIF 132 >UniRef50_Q9RH81 Rod shape determining protein MreD (Fragment) n=1 Tax=Pseudomonas fluorescens RepID=Q9RH81_PSEFL Length = 95 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 51/92 (55%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 MA+ S+ W++WL+F I +LL + P P + + RP W+ L+L +W L LPH+V + T Sbjct: 1 MANTHSRNGWIVWLTFAIGMLLSVSPLPQFMEILRPLWLALLLAFWSLNLPHKVGMVTAM 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKY 92 +G D++ G+ LG L + + L Sbjct: 61 FLGLAEDVLYGTLLGQNALITKVYSPLSMTLS 92 >UniRef50_B2S393 Rod shape-determining protein n=2 Tax=Treponema pallidum RepID=B2S393_TREPS Length = 168 Score = 52.1 bits (124), Expect = 7e-06, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 5/155 (3%) Query: 10 WVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI 69 W + SFL +++ + + + P+ VLL++L+ + + TGF+ G I D + Sbjct: 7 WSVGTSFLFSIVEMAVFVHVSYLSIMPDLVLLVVLFTSIHNGVVAGIWTGFIAGIIFDFL 66 Query: 70 SGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI--- 126 S S G+ + I ++V + ++ A++ + +V + Sbjct: 67 SISPFGLHSFVFTTIGFMVGKVQGRYHIDRVFAPAVLAGFAMIFKVGLVLVLRGVFGPNI 126 Query: 127 --NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 F +++ +N V P++F L+ F Sbjct: 127 QVYSVFSRQLWIEMTLNIVFVPFVFGLLNMFPTTF 161 >UniRef50_B1I4Q2 Putative uncharacterized protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4Q2_DESAP Length = 164 Score = 50.2 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 50/106 (47%) Query: 35 RPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQL 94 +P+ VL++++Y+ + R GF+ G D +SG LG+ LA++ Y+V L + Sbjct: 30 KPDLVLVLVVYYAIFNGPREGAFLGFLGGLAHDFLSGYYLGLNALAVAASGYVVGLGHIR 89 Query: 95 FRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 + A + L +++V+ I + + E +W ++ Sbjct: 90 LFKENHFVVAGIAFLATILVEGIRYLLLLFLGVTILPGEAWWGLII 135 >UniRef50_Q0AWG6 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWG6_SYNWW Length = 167 Score = 48.2 bits (114), Expect = 9e-05, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L F LL + + P+ VL+ ++++ L R GF+ G + Sbjct: 1 MRYLLLFLLPFTAILLQSTIFSFYGIKGTLPDLVLVFVVFFALINGARGGTIYGFLCGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL G +GV L+ + AYLV + + V + + ++VF+ Sbjct: 61 EDLYLGRFIGVNALSKAFTAYLVGHFQDRVFKENILVALIAVFFSTFINSLLVFFLALFT 120 Query: 126 INVS 129 + Sbjct: 121 HDTF 124 >UniRef50_C1F7C9 Rod shape-determining protein MreD n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7C9_ACIC5 Length = 172 Score = 45.9 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 4/126 (3%) Query: 37 NWVLLILLYWILALPHRVN-VGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 + LL+ +Y+ + + + G +G + D+ + LGV +A +II Y A Sbjct: 46 DLPLLVTIYFAITWRNPIGGTLCGAAIGILQDVPTQHPLGVYGIAKAIIGYFAASIGIRI 105 Query: 96 RNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWS---SVVNGVLWPWIFLLM 152 +L + L++ +LV IV+ E +I+ + + +VVN V+ +F L Sbjct: 106 DTESLGTRLLLIPAFTLVHGGIVWLLETHLIDQPYAWIWWLEGLHAVVNAVIGVMLFSLF 165 Query: 153 RKVRQQ 158 + R++ Sbjct: 166 DRARRR 171 >UniRef50_A4J7K3 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7K3_DESRM Length = 166 Score = 45.2 bits (106), Expect = 8e-04, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 54/135 (40%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + L + LL + + +P+ VL+ +++ R GF+ G Sbjct: 1 MRSIVFFLLITISLLLQSTVFTFLQVAGIKPDLVLMFVVFNGFLRGSREGAFLGFLAGLA 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ +GS +G+ L + YLV L F ++ ++V ++ +V +I++ F + Sbjct: 61 QDIFTGSYIGLNALTKMLAGYLVGLAETRFYKESVIIVSMVTFVVGVVNQVILYLLLFYL 120 Query: 126 INVSFRPEVFWSSVV 140 F ++ Sbjct: 121 NVEISPYYAFGQVII 135 >UniRef50_D1AAV7 Rod shape-determining protein MreD n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAV7_THECD Length = 193 Score = 43.2 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 56/150 (37%), Gaps = 12/150 (8%) Query: 21 LLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI--SGSTLGVRV 78 + +P P + P+ VLL ++ L + V GF G D++ + T+G Sbjct: 30 VANRLPLPGAVT---PDLVLLSVVALALTCGPLMGVVAGFGAGLAADIVPPADHTIGRYA 86 Query: 79 LAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVF--- 135 L +I YL L A+ V + +L ++ ++ + + Sbjct: 87 LVYCVIGYLCGLASDEMDRSAVV-PFFAVAVGALAGTVLYAGVGMMLGDPRADWHIVARV 145 Query: 136 --WSSVVNGVLWPWIFL-LMRKVRQQFAVQ 162 V + + P++ ++R +R+ + Sbjct: 146 VPLQVVYDVLASPFVVWAVLRAMRRYERER 175 >UniRef50_UPI0000E87A9D hypothetical protein MB2181_01455 n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87A9D Length = 162 Score = 43.2 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 46/128 (35%) Query: 16 FLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLG 75 FL+ LL + P P++++ + +L + + T F G I D++ G +G Sbjct: 19 FLLTLLFSQINIPFISSGSLPDYLVAWSVGVMLLNNKQYGILTIFFAGLIADILIGQIIG 78 Query: 76 VRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVF 135 + ++ ++F + Q+ + ++L +V + + Sbjct: 79 QYAFTFILTYAILFFIQKMFAIQSYKQRTITGIILVIVALLTTNITSTTYQTNFHETSIV 138 Query: 136 WSSVVNGV 143 + + Sbjct: 139 LKLITTII 146 >UniRef50_B7ANR5 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR5_9BACE Length = 176 Score = 42.9 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 40/100 (40%) Query: 36 PNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 PN++++I + + + TGFV G I DL S S +G+ +AM I Y YQ + Sbjct: 32 PNFLIIIPVLFGFLNGKTEGIYTGFVCGIIYDLFSYSIIGLSSIAMMFIGYFAGCFYQKY 91 Query: 96 RNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVF 135 +V + + + FL+ N Sbjct: 92 EEKEFLMPIAMVGAGDFIYGFLSYVVNFLLHNKLDVLYYL 131 >UniRef50_B6ITQ9 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6ITQ9_RHOCS Length = 173 Score = 42.9 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 54/126 (42%), Gaps = 3/126 (2%) Query: 36 PNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 P +L+ ++YW + P + F++G + DL+ G+ LG+ L + AY + L + F Sbjct: 43 PPLMLMAVVYWAIHRPDLLRPTLVFLLGVLNDLLGGAPLGMTALVFVL-AYWLLLTQRRF 101 Query: 96 RNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP--EVFWSSVVNGVLWPWIFLLMR 153 + + + + V WA + ++ + ++ ++P ++ Sbjct: 102 FLGNSFLLLWIGFTMVALGAAAVQWAVYSLMAAELLTFRAAGFQVMLATAVFPLAAWVLM 161 Query: 154 KVRQQF 159 ++ + F Sbjct: 162 RLHRAF 167 >UniRef50_B8FVF2 Rod shape-determining protein MreD n=2 Tax=Desulfitobacterium hafniense RepID=B8FVF2_DESHD Length = 169 Score = 42.9 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 1/123 (0%) Query: 6 SQGRWVIWLSFLIALLL-QIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + +I + L +L+L + + + +P+ VLL +Y L G G Sbjct: 1 MRRNILIIVMLLFSLILPGTVFYFWSWGGIKPDLVLLFTIYMALHHRTLPGALWGLGAGM 60 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + D G G+ L ++++A L Q + + AL+V L++ V + ++ + L Sbjct: 61 LADFYLGRHFGMYALTLTVVALLSDWLSQRWYRENYFLIALLVFLVTFVGEGLIAFLNIL 120 Query: 125 VIN 127 V Sbjct: 121 VGA 123 >UniRef50_A7HW07 Rod shape-determining protein MreD n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HW07_PARL1 Length = 177 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 2/112 (1%) Query: 20 LLLQIMPWPDNL-IVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRV 78 +LL +P + P + L+ + YW + P F +G I DL+SG +G+ Sbjct: 32 VLLSFVPLGRIVGSPLTPAFPLMAIYYWAIVRPEMFPPLAVFTVGLIFDLLSGGAIGLWA 91 Query: 79 LAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 ++ Y V + ++ A + + L++ + W + + F Sbjct: 92 FVY-VVTYAVVISQRMLVMNAPFSVFWIGFLVAAAFAGALAWGVVSISHGMF 142 >UniRef50_Q1IRN5 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRN5_ACIBL Length = 176 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 60/151 (39%), Gaps = 5/151 (3%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRV-NVGTGFVMGAILDLIS 70 I L L +P + + LL+ +Y+ ++ + + + G ++G + D ++ Sbjct: 26 IVAPLLAIFLQAFIPIKIHFFDVF-DLPLLVTIYFAMSRRNPITGLLQGSIIGLVQDSLT 84 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 +G+ +A +++ + + + + L+ + + + F ++ Sbjct: 85 RDMIGMYGIAKTLVGFAASQLGAKIDSDNPSSRFLLTLGFYIGHQSVYFLIARGMVRQPI 144 Query: 131 RPEV---FWSSVVNGVLWPWIFLLMRKVRQQ 158 +V N +L ++F +M + RQ+ Sbjct: 145 EWHWAHEMLGAVANALLAVFLFAVMDRFRQR 175 >UniRef50_C1QD51 Rod shape-determining protein MreD n=2 Tax=Brachyspira RepID=C1QD51_9SPIR Length = 180 Score = 42.1 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 + +P+ +L+ L++ + GF++G + D++S T G + I + V Sbjct: 29 ALGAKPDLLLIFLVFISFRYGSFDGIIYGFIIGLLQDIVSSGTFGSYAIIFLNIGFFVGF 88 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPE 133 +Q + ++LV +I A FLV ++ Sbjct: 89 FNTRI----FIKQIAAGIFVTLVGYLIKIIALFLVTSIYSDLS 127 >UniRef50_C0EWW6 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWW6_9FIRM Length = 171 Score = 42.1 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 53/135 (39%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 +G L F+ +L + L PN +L+++ + + + GF G + Sbjct: 2 KRGIVTAVLVFICFILQTSVFELIKLAGITPNILLILISSVAVMRGQKPGMIVGFFSGLL 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ GST+G + ++ +++ + +++ + L+ I++ L+ Sbjct: 62 MDIFYGSTIGGFAFLYMVFGFVDGFFNRIYYSDDNILPLVLIGVNDLIYGFIMYILCGLL 121 Query: 126 INVSFRPEVFWSSVV 140 N + ++ Sbjct: 122 QNHLRIIYYLKNIIL 136 >UniRef50_D2BCD8 Putative uncharacterized protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BCD8_STRRD Length = 176 Score = 42.1 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 12/148 (8%) Query: 21 LLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI--SGSTLGVRV 78 ++ +P P P+ VLL ++ + L GF G D++ + LG Sbjct: 22 VVNRLPLPGEGA---PDLVLLTVVGYALVRGANAGAVMGFCAGLASDVLPPAAHVLGQHA 78 Query: 79 LAMSIIAYLVALKYQLFRNLALWQQ----ALVVMLLSLVVDIIVFWAEFLVINVSFRPEV 134 L + +I ++ ++ + Q A V + + + + + Sbjct: 79 LVLCLIGFMAG---RVVESYPDAGQLTTLACAVAGPLVAAGVGALLGDDRISRSMLTATL 135 Query: 135 FWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + N + P + + +V + V+ Sbjct: 136 PQAVLYNLLAAPPVVWAVTRVVRGPRVR 163 >UniRef50_B3T1Z2 Putative rod shape-determining protein MreD n=1 Tax=uncultured marine microorganism HF4000_133G03 RepID=B3T1Z2_9ZZZZ Length = 168 Score = 41.7 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 52/118 (44%) Query: 41 LILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLAL 100 +++ YW+L P + G F+ G I D++ G +G+ L + IIA + A + +L Sbjct: 44 ILIYYWVLKQPQVLGYGFIFLSGIITDVVFGLPIGISALTLLIIASVAAYVRAVTVRPSL 103 Query: 101 WQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + + L+ + I F + F +S+ + +P+++++ + Sbjct: 104 LYDWMSFIPALLIANFIYFIVLYFSNYSIDYLYFFKNSIFTFLFYPFLWVIFGILINF 161 >UniRef50_A8TM61 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM61_9PROT Length = 169 Score = 41.7 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 61/148 (41%), Gaps = 1/148 (0%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 I L+ L+A+L + P + + YW + P F++G + D+++ Sbjct: 19 IALTVLLAILSVVPIGVPGYATVVPAYTAMAAFYWAVFRPDLQPPFALFLVGVLQDILAA 78 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI-NVSF 130 + LG+ L++ ++ L + + F L +L+ + ++++ +++ Sbjct: 79 TPLGMTALSLMVVHGLALSQRRAFLGKPFALAWLGFLLIHGLSALLIWLLASMLVLQPIG 138 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + +V L+P + + ++ + Sbjct: 139 PEPAVFQYLVTVTLFPLVAWIFVRMHRY 166 >UniRef50_A8MHM1 Putative uncharacterized protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MHM1_ALKOO Length = 165 Score = 40.9 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 54/130 (41%), Gaps = 7/130 (5%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVF-----RPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 I +S ++ +L ++ L F PN +++++ + + + GF +G + Sbjct: 3 FIIISIIV--VLNLILQSTTLQWFNILGTLPNTAIILVISFAVHSGKKQGAIIGFFVGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ G +G+ LA +I Y V L Q + ++ L ++ +++ FL+ Sbjct: 61 QDITFGRIIGMNALAYMLIGYTVGLTEQKIFKGNILIPIILTGLATIFYELMNLLLIFLL 120 Query: 126 INVSFRPEVF 135 +F Sbjct: 121 GYRIELLNIF 130 >UniRef50_B4V3T9 Rod shape-determining protein n=18 Tax=Streptomyces RepID=B4V3T9_9ACTO Length = 243 Score = 40.9 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 9/151 (5%) Query: 17 LIALLLQIMPWPDN-LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI--SGST 73 ++AL++Q+ L P+ VLL ++ L H GF G + DL + Sbjct: 14 VVALVIQVSVLGRLQLPGAVPDLVLLTVVALALVYGHVSGALIGFGAGLLADLAPPADHA 73 Query: 74 LGVRVLAMSIIAYLVALKYQ-LFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI-----N 127 G L + +I YLV L R + W L V+ ++ ++ LV + Sbjct: 74 AGRYALVLCLIGYLVGLARPDSGRFRSAWGPMLTVVAAAIGSTLLYAGVGALVGDTAARH 133 Query: 128 VSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 V +F +++ + +L P+ + + ++ Sbjct: 134 VGLTGLLFTATLYDLLLAPFTVPFIMALARR 164 >UniRef50_B3E5W6 Rod shape-determining protein MreD n=1 Tax=Geobacter lovleyi SZ RepID=B3E5W6_GEOLS Length = 162 Score = 40.2 bits (93), Expect = 0.026, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 52/132 (39%) Query: 13 WLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGS 72 L + LL + L +++P+ +L+++++ L P ++ + +G + D +SG Sbjct: 9 ALVLGVVLLQTSVLPQYLLSLYKPDLLLILMVFLALRAPVSTSLPAAYGLGLLKDCLSGL 68 Query: 73 TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP 132 LG+ + ++ ++ L V L + +I + + Sbjct: 69 YLGLNAFSFLLVYLVLKTLSDRLYVQNALLLVLTVSLSTFATMLINALLLSIFSEAAGIF 128 Query: 133 EVFWSSVVNGVL 144 ++++ +L Sbjct: 129 SSLMAALIPHLL 140 >UniRef50_C8WAG3 Rod shape-determining protein MreD n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8WAG3_ATOPD Length = 186 Score = 39.8 bits (92), Expect = 0.030, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 2/145 (1%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPD-NLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 S R++ I + +I +LQI+ P + N+ L+ L + V GF Sbjct: 3 VSDRNKNVRSITILAVICFILQIVLTPQVSFGGGVINFALIFSAAIALKYGGKTGVVCGF 62 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 V G I DL S + +G+ L + + +Y + + + + +V+L + V + Sbjct: 63 VSGLIYDLTSANPIGLMALLLVVSSYFIGQEVRDRISGNFGTSMGLVVLQTFGVTFMYQL 122 Query: 121 AEFLVI-NVSFRPEVFWSSVVNGVL 144 L+ +F + + S + Sbjct: 123 INSLIGSGGNFLEGLLFKSFPTMLF 147 >UniRef50_A5D430 Cell shape-determining protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D430_PELTS Length = 163 Score = 39.8 bits (92), Expect = 0.034, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 2/134 (1%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 ++ +P V+LI ++ L R GF G I DL+SGS +G+ L+ + YL Sbjct: 26 IMGIKPELVMLIAIFNGFLLGAREGAFLGFAGGVIEDLVSGSYIGLNALSCMVAGYLAGS 85 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSV--VNGVLWPWI 148 + F + + + + F + + Sbjct: 86 GGERFFKENILVSTGIAFFSAAAGLTANYLLLMHAGIYLPALHAFLRVIFPSAAYTAVLL 145 Query: 149 FLLMRKVRQQFAVQ 162 LL + + F +Q Sbjct: 146 PLLFGRALRSFQIQ 159 >UniRef50_A4U0U0 Cell shape-determining protein n=3 Tax=Magnetospirillum RepID=A4U0U0_9PROT Length = 171 Score = 39.8 bits (92), Expect = 0.035, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 3/150 (2%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 + ++ ++ LL I L P L+ + YW + P + + F++G + D+I G Sbjct: 19 VGVTLMLLLLTAIPTRIPGLSGIIPMLPLMGVYYWAIYRPDLLPAWSAFLIGLLYDIIGG 78 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW--AEFLVINVS 129 + LGV L + + +A + F + A L W L Sbjct: 79 TPLGVNALVL-LSVQGIAAGQRRFFLGKSFMVAWWAFGLLAAAAAGATWLLVTILYGQAL 137 Query: 130 FRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 V + ++ L+P + + + + F Sbjct: 138 DASPVIFDYLLTMGLFPLLTWTLARTQMAF 167 >UniRef50_C0CHV5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CHV5_9FIRM Length = 176 Score = 39.8 bits (92), Expect = 0.036, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 36/93 (38%) Query: 48 LALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVV 107 L + + TGF G ++DL G G+ L + Y +++ + + V Sbjct: 44 LLRGKKTGMFTGFFCGILVDLFYGPVFGLYALIYMYLGYFSGFGCKIYYDDDMKVPMCFV 103 Query: 108 MLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 + L+ + V+ +FL+ F ++ Sbjct: 104 GIGDLLYNFAVYGLQFLLRGRLGFGTYFLKIMI 136 >UniRef50_Q01ZY2 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZY2_SOLUE Length = 177 Score = 39.4 bits (91), Expect = 0.039, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 57/150 (38%), Gaps = 3/150 (2%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 I + L L +P + F +L+++ + I+ + G ++G D +S Sbjct: 27 IVVPLLAILFQVYVPMFFQFLRFVEMPLLVVVYFSIMQRNQITGLTIGALVGLAQDSLSD 86 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV---INV 128 S LG+ + +++ Y A + L+ + + + + Sbjct: 87 SPLGMYGIVKTLVGYFAASVGVRLDVEHSLIRLLLCFFFYIFHQFFFWVMSHALLAKLGP 146 Query: 129 SFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 P +V+N ++ ++F + ++R++ Sbjct: 147 FDWPGTVVQAVLNAIIGVFLFSFLDRLRER 176 >UniRef50_D1BNE8 Rod shape-determining protein MreD n=3 Tax=Veillonella RepID=D1BNE8_VEIPT Length = 164 Score = 39.4 bits (91), Expect = 0.040, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 50/133 (37%) Query: 13 WLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGS 72 FLI + + + PN +L I++ L R+ + + + G + D++ + Sbjct: 8 LCGFLIYFIQAQLLPTIFHTNWLPNLILTIIVMITLFKGRRMGLISAVIGGIVHDVLISN 67 Query: 73 TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP 132 G+ + I+ YL++ + + +V + +L+ +I + Sbjct: 68 FFGLHLFPYVIVVYLLSAVKHRIYEERWYWSSGIVAICTLLDGVIRSFMILASGGDLHFG 127 Query: 133 EVFWSSVVNGVLW 145 W V+ + W Sbjct: 128 LYLWHMVLPVMFW 140 >UniRef50_A6TQI1 Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TQI1_ALKMQ Length = 165 Score = 39.4 bits (91), Expect = 0.042, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 45/105 (42%) Query: 36 PNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 PN L++++ + + + + GF +G + D++ +GV L + I+ Y V Q Sbjct: 31 PNTALILVIAFAIHMGKQKGAVVGFFIGILQDILFSQIIGVNALVLMIVGYFVGSMNQKI 90 Query: 96 RNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 L ++ + ++ + I +L+ ++F ++ Sbjct: 91 MRDHLAVPFVLTVGATVFYEFISVLFLYLLRYQVTILDLFSRVLI 135 >UniRef50_C8WXL3 Rod shape-determining protein MreD n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL3_ALIAD Length = 173 Score = 39.4 bits (91), Expect = 0.044, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 10/156 (6%) Query: 13 WLSFLIALLLQIMPWP-DNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 +++ I L+LQ + + V P++VL+IL+ L + + G +G I D+ G Sbjct: 7 FVTLWIGLILQATLFEIPPMDVIHPDFVLVILVLLALFRGANLAMVFGIAIGLIQDVCYG 66 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 +G+ A + AY+ A + F L L M LS V + + L S Sbjct: 67 PFIGLNAFAYGLTAYIAAAVFSQFMQKNLAIAFLTTMGLSFVHSWLTYGFMRLFELTSDS 126 Query: 132 PEVFWSS---------VVNGVLWPWIFLLMRKVRQQ 158 + S+ VV L+P + R++ Sbjct: 127 IQYALSASLQAMIVNGVVALALYPVYRAWFTRPRRR 162 >UniRef50_C9R8K4 Rod shape-determining protein MreD n=1 Tax=Ammonifex degensii KC4 RepID=C9R8K4_AMMDK Length = 163 Score = 39.0 bits (90), Expect = 0.050, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 6/134 (4%) Query: 35 RPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQL 94 RP+ +L++ + R G V G I DL++G +G+ L + YL Sbjct: 30 RPDLLLILAAFIGFWRGPREGGLWGAVAGLICDLVTGGFVGLNALTKLLAGYLAGQAGAF 89 Query: 95 FRNLALWQQALVVMLLSLVVDIIVFWAEFLVI-----NVSFRPEVFWSSVVNGVLWPWIF 149 F + ALV ++LV +++ + + +F + + N + +F Sbjct: 90 FYRESSLTCALVTGSVTLVAELVTYLLLLFLGIRLPFKSTFVYLILPVTAYNAIAAVVLF 149 Query: 150 LLM-RKVRQQFAVQ 162 L R + ++F V+ Sbjct: 150 HLWQRLLPRRFKVR 163 >UniRef50_C4Z086 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z086_EUBE2 Length = 177 Score = 39.0 bits (90), Expect = 0.050, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 1/129 (0%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 + L L+ + ++ PNW++++ +++ + GF G + DL Sbjct: 8 LILILFFYLMQVSLARVISIANISPNWLIILPVFFGFFAGKNEGMFVGFFAGIMYDLFFS 67 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 G L I Y YQ + + +V++ I + FL+ Sbjct: 68 GLFGFTALVFIYIGYFSGFLYQKYEVREILIPLALVIIADFGYGFISYIGNFLL-YNRLN 126 Query: 132 PEVFWSSVV 140 F S + Sbjct: 127 VGYFMSRFI 135 >UniRef50_A3JW84 Sensor protein n=2 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JW84_9RHOB Length = 1521 Score = 39.0 bits (90), Expect = 0.052, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 60/170 (35%), Gaps = 19/170 (11%) Query: 1 MASYRSQGRWVIWLSFL--IALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGT 58 M + L FL + L + + +VF +V++ L L VG Sbjct: 1 MTDNVKKIIAFFLLGFLSLVGNALNVELFFGARLVFSSVFVIIALF----TLGPWYGVGV 56 Query: 59 GFVMGAILDLISGSTLGVRVLAMSI----IAYLVALKYQLFRNLALWQQALVVMLLSLVV 114 F G ++ A I + +L RN +L A + +++ Sbjct: 57 AFFGGLYTIVLW-----QHPFAFIIYVAEAVFFAFTASRLNRNTSLI--AWDFVFWAIIG 109 Query: 115 DIIVFWAEFLVINVSFRPEVFWS--SVVNGVLWPWIFLLMRKVRQQFAVQ 162 + F + + +SF + +NG++ I L+ + +++ ++ Sbjct: 110 IPLTFVLFSIFLELSFSTIALIAFKETLNGLINVLIASLLLILGRKYFLK 159 >UniRef50_C7LYA8 Rod shape-determining protein MreD n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYA8_ACIFD Length = 167 Score = 39.0 bits (90), Expect = 0.053, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 5/128 (3%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 ++ P+ V+ ++ GFV G +D + G+ L ++ YL Sbjct: 29 ILGVHPDLVMAMVAAIGAVRGRESGAIAGFVGGIAVDAFLSTPFGLSALIYVVVGYLAGE 88 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR-----PEVFWSSVVNGVLW 145 ++ L + +VV L SLV + + AEFL+ + ++ VN V+ Sbjct: 89 VERIDGGAPLAVRWIVVGLASLVGEGLFVVAEFLLGLANPLQTRLVEQILVVGGVNLVIA 148 Query: 146 PWIFLLMR 153 P + L+R Sbjct: 149 PVVLGLVR 156 >UniRef50_C8WGI8 Rod shape-determining protein MreD n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGI8_EGGLE Length = 175 Score = 39.0 bits (90), Expect = 0.058, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 10/154 (6%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIV-FRPNWVLLILLYWILALPHRVNVGTGFVMGAILD 67 VI + ++ALLLQI+ P+ + +PN++L +L +A P F +G + D Sbjct: 7 GIVIAVGAVVALLLQIVVAPNIALFSAQPNFLLAYVLVVAIARPLDAGSALPFALGLVCD 66 Query: 68 LISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDII---VFWAEFL 124 L+ +G I++++ + + + N L+ + ++ + +++ + L Sbjct: 67 LLGSGPVGGYAFLFVIVSFIASRAFSVLDNDTLFMPVTIFVVATFAAEMLYGALLIGLGL 126 Query: 125 VINVSFRPEV------FWSSVVNGVLWPWIFLLM 152 + + VV VL+P I L+ Sbjct: 127 SASPVDAFLYRALPCTLYDCVVGLVLYPIIARLL 160 >UniRef50_A5Z699 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z699_9FIRM Length = 177 Score = 38.6 bits (89), Expect = 0.064, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 53/130 (40%), Gaps = 3/130 (2%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 +I +SF++ L ++ PN +L++ + TG G ++D+ Sbjct: 14 IIIVSFVLQSYLSLV---SGQSFVVPNLLLIVTSIFGFIKGSNYGSVTGLFCGLLVDVAF 70 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 G +G+ L I ++ + ++ + ++ LVV + + ++ + FL+ N Sbjct: 71 GDVIGLFALIYMYIGFISGVFKKILYSDHIFMPMLVVFVNDFLYNLAYYVFRFLLRNKLD 130 Query: 131 RPEVFWSSVV 140 F ++ Sbjct: 131 FSYYFEKVIL 140 >UniRef50_Q0AN30 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0AN30_MARMM Length = 173 Score = 38.6 bits (89), Expect = 0.064, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 2/137 (1%) Query: 13 WLSFLIALLLQIMPW-PDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 S L+AL++Q P + + P W L+ + W P + F +G DL++G Sbjct: 18 IASVLVALIVQASPTRLVDGLTIMPTWTLMAIFLWSGVRPQFMPPIAVFAIGLTQDLLTG 77 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + +GV L+ + + + + L L L+ I F A + Sbjct: 78 APMGVWALSYLVAISVFRFRGEDGMPRDLPPVLLRFGATLLLAHAIAFAAGSFALEQLAD 137 Query: 132 PEVF-WSSVVNGVLWPW 147 + V + +++P Sbjct: 138 FQPLAIEVVASILMFPL 154 >UniRef50_A1HP02 Rod shape-determining protein MreD n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP02_9FIRM Length = 164 Score = 38.6 bits (89), Expect = 0.070, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 43/131 (32%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + L + + + RP+ +L+I + L VG GF G I Sbjct: 1 MRTLVWSGLILITIIFQAAVIPLIGYKGVRPDLLLIIAVSTGLLFGKEQGVGVGFFAGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL SG+ G+ LA Y+ L + + L + +L I+ + Sbjct: 61 QDLASGNIFGLNTLAKMATGYVAGLAERKVFKENILLPVLATVAATLFHGAIIVVLLAGL 120 Query: 126 INVSFRPEVFW 136 VF Sbjct: 121 GYKVDIAAVFI 131 >UniRef50_B7GIQ3 Cell shape-determining protein n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GIQ3_ANOFW Length = 174 Score = 38.6 bits (89), Expect = 0.071, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 51/138 (36%), Gaps = 1/138 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + ++ + ++ + P +L+ +++ + + + GF Sbjct: 1 MNRLFLPFLVTVMFLLESIIVQLLSQPLFDVYLLVPRMLLVFIVFITIFIGQTEGMTYGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 + G + D+ LG A S+IAYL+A + W + ++ V+ + Sbjct: 61 IFGLLYDVAYTELLGAYAFAFSLIAYLIAKAMN-VFHKNAWTASFFAIVAIACVEWYAYA 119 Query: 121 AEFLVINVSFRPEVFWSS 138 + ++ + + F + Sbjct: 120 IQLVIGGTTMSVQTFLQA 137 >UniRef50_UPI0001C15A7A conserved hypothetical protein n=2 Tax=Nostocaceae RepID=UPI0001C15A7A Length = 212 Score = 38.6 bits (89), Expect = 0.075, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 4/124 (3%) Query: 8 GRWVIWLSFLIALLLQIM-PWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 +I++S L+ LL+ L+ PNW L+ L+ W + P V G +MG + Sbjct: 40 NWVIIFISVLLCLLMSPTRFLGMELLGIAPNWALIWLVAWSVKRPAISGVFAGIIMGLLQ 99 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQ-LFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D ++ S ++++I+ L + + F AL+V ++ L+ + + F + Sbjct: 100 DALT-SPHPSHTVSLAIVGILTSRLQKHRFIQEDFISIALIVFIMVLISNTV-FVVQLFF 157 Query: 126 INVS 129 N S Sbjct: 158 TNNS 161 >UniRef50_C1XP36 Rod shape-determining protein MreD n=2 Tax=Meiothermus RepID=C1XP36_9DEIN Length = 159 Score = 38.6 bits (89), Expect = 0.079, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 3/136 (2%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + ++ +FL+ L+ + P + P+ L L + + F +G + Sbjct: 1 MRPILLLAFTFLLQSLISGL-LPGWVSP--PDLPFLATLAIAARVSPYAGLVIAFAVGLL 57 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL + G+ V+ + Y+ + F Q V+ L + + + Sbjct: 58 MDLSAAGYPGLNVVGYLLGTYVFYRLSRAFHWDEPLGQFAVLAGSLLTKWLGYLLMVYWL 117 Query: 126 INVSFRPEVFWSSVVN 141 F V+ Sbjct: 118 RGEPFGFLSITPVFVS 133 >UniRef50_C9LXR8 Rod shape-determining protein MreD n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LXR8_9FIRM Length = 166 Score = 38.2 bits (88), Expect = 0.084, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 2/149 (1%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M SYR W+ ++ L L P + N +L++ + W L R GF Sbjct: 1 MISYRRIFFWLAFVIALFVLQTSFFPV-FSWNGVSVNLMLVLTVSWSLLYGARRGAFLGF 59 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 + G + DL +G G+ V A++II Y + ++ A+ M + V Sbjct: 60 MTGLLQDLTTGMFFGMDVFALTIIGYATGAFSRNVFKDPVFLPAMATMWATAAHYFFVLV 119 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIF 149 L+ F +++ + W +F Sbjct: 120 LMLLLGYG-FSLLYVVKTLLPALCWNVLF 147 >UniRef50_C5RGQ5 Rod shape-determining protein MreD n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGQ5_CLOCL Length = 164 Score = 38.2 bits (88), Expect = 0.096, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 58/154 (37%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + + + L + +P N+ + P+ +++ +L + + + G + G Sbjct: 2 KKIITIAVLIILLYIMDSTWVPLFINIYGYTPSLLMIFILSYSIINGSYEGIWVGAIAGI 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 D+ T GV ++ +L + ++V + + II+ ++ Sbjct: 62 FQDVFFIHTFGVNGFINVLLCFLAGHVGKSLFRQKRAVPTILVGFFTAIKQIIIMGYLYI 121 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + + S+ N +L +I+ + K+ ++ Sbjct: 122 YGASANIYTIIAPSIFNLILAFFIYKWIYKLCKK 155 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A7C6B4 Rod shape-determining protein MreD n=1 Tax=Beggi... 125 5e-28 UniRef50_C4L8L5 Rod shape-determining protein MreD n=1 Tax=Tolum... 123 3e-27 UniRef50_Q2BKP8 Rod shape-determining protein MreD n=2 Tax=Gamma... 122 4e-27 UniRef50_A6VWN4 Rod shape-determining protein MreD n=2 Tax=Marin... 121 9e-27 UniRef50_C7R9G4 Rod shape-determining protein MreD n=1 Tax=Kangi... 120 2e-26 UniRef50_Q47VG6 Rod shape-determining protein MreD n=4 Tax=Alter... 119 3e-26 UniRef50_C6MDC7 Rod shape-determining protein MreD n=1 Tax=Nitro... 119 4e-26 UniRef50_Q2YC95 Rod shape-determining protein MreD n=1 Tax=Nitro... 118 5e-26 UniRef50_Q15ZH1 Rod shape-determining protein MreD n=4 Tax=Alter... 117 9e-26 UniRef50_Q0AFP8 Rod shape-determining protein MreD n=2 Tax=Nitro... 117 1e-25 UniRef50_P0ABH6 Rod shape-determining protein mreD n=132 Tax=Ent... 117 1e-25 UniRef50_A0KFA9 Rod shape-determining protein MreD n=3 Tax=Gamma... 117 2e-25 UniRef50_C5SBR5 Rod shape-determining protein MreD n=1 Tax=Alloc... 116 2e-25 UniRef50_Q7NPY3 Rod shape-determining protein MreD n=2 Tax=Chrom... 116 2e-25 UniRef50_C4K6Y8 Rod shape-determining protein n=1 Tax=Candidatus... 116 2e-25 UniRef50_C6P2H4 Rod shape-determining protein MreD n=1 Tax=Sider... 115 5e-25 UniRef50_Q5QWE3 Rod shape-determining protein n=2 Tax=Idiomarina... 114 9e-25 UniRef50_B2SMY7 Rod shape-determining protein MreD n=20 Tax=Xant... 112 3e-24 UniRef50_C5BSY4 Rod shape-determining protein MreD n=1 Tax=Tered... 112 5e-24 UniRef50_B7V018 Rod shape-determining protein MreD n=21 Tax=Pseu... 111 7e-24 UniRef50_Q60CK4 Rod shape-determining protein MreD n=1 Tax=Methy... 111 9e-24 UniRef50_Q0KFF4 Rod shape-determining protein MreD n=12 Tax=Burk... 110 1e-23 UniRef50_Q07WQ1 Rod shape-determining protein MreD n=21 Tax=Shew... 110 1e-23 UniRef50_C0N753 Rod shape-determining protein MreD n=1 Tax=Methy... 110 2e-23 UniRef50_B8GL91 Rod shape-determining protein MreD n=2 Tax=Thioa... 110 2e-23 UniRef50_A4BLX4 Rod shape-determining protein MreD n=1 Tax=Nitro... 110 2e-23 UniRef50_B5JU59 Rod shape-determining protein MreD n=1 Tax=gamma... 109 3e-23 UniRef50_A0Z7H0 Rod shape-determining protein n=1 Tax=marine gam... 109 4e-23 UniRef50_C7RML3 Rod shape-determining protein MreD n=3 Tax=Betap... 109 4e-23 UniRef50_A4A5B4 Rod shape-determining protein MreD n=1 Tax=Congr... 108 6e-23 UniRef50_A1WVS1 Rod shape-determining protein MreD n=2 Tax=Ectot... 108 8e-23 UniRef50_A4BGL4 Rod shape-determining protein MreD n=1 Tax=Reine... 107 8e-23 UniRef50_C4GIM3 Putative uncharacterized protein n=1 Tax=Kingell... 107 8e-23 UniRef50_Q1QVB9 Rod shape-determining protein MreD n=1 Tax=Chrom... 107 2e-22 UniRef50_B7RTI7 Rod shape-determining protein MreD n=2 Tax=uncla... 107 2e-22 UniRef50_A9N8Z0 Rod shape-determining protein MreD n=7 Tax=Coxie... 106 3e-22 UniRef50_Q21FT2 Rod shape-determining protein MreD n=1 Tax=Sacch... 105 5e-22 UniRef50_B3PC04 Putative rod shape-determining protein MreD n=1 ... 105 5e-22 UniRef50_A9I0I9 Rod shape-determining protein MreD n=5 Tax=Borde... 105 5e-22 UniRef50_A1U482 Rod shape-determining protein MreD n=3 Tax=Marin... 105 6e-22 UniRef50_B8KR95 Rod shape-determining protein MreD n=1 Tax=gamma... 104 8e-22 UniRef50_C0DXR0 Putative uncharacterized protein n=1 Tax=Eikenel... 104 1e-21 UniRef50_C1D5N3 MreD n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 104 1e-21 UniRef50_C5V1V9 Rod shape-determining protein MreD n=1 Tax=Galli... 103 2e-21 UniRef50_Q21RI3 Rod shape-determining protein MreD n=66 Tax=Burk... 102 3e-21 UniRef50_Q1GYC9 Rod shape-determining protein MreD n=3 Tax=Methy... 102 4e-21 UniRef50_Q0VS68 Rod shape-determining protein MreD n=2 Tax=Alcan... 101 6e-21 UniRef50_A1K1T9 Rod shape-determining protein n=4 Tax=Rhodocycla... 101 1e-20 UniRef50_C7I0H6 Rod shape-determining protein MreD n=4 Tax=Burkh... 101 1e-20 UniRef50_B5F9L8 Rod shape-determining protein MreD n=89 Tax=Gamm... 101 1e-20 UniRef50_Q1ZG63 Hypothetical rod shape-determining protein MreD ... 100 3e-20 UniRef50_Q1MYL6 Rod shape-determining protein MreD n=1 Tax=Berma... 98 1e-19 UniRef50_Q7VRC2 Rod shape-determining protein MreD n=2 Tax=Candi... 96 3e-19 UniRef50_C5TMH6 Rod shape-determining protein MreD n=5 Tax=Neiss... 91 2e-17 UniRef50_A4T0H0 Rod shape-determining protein MreD n=2 Tax=Polyn... 89 5e-17 UniRef50_A8PNB8 Rod shape-determining protein MreD n=1 Tax=Ricke... 89 5e-17 UniRef50_UPI00016994A6 Rod shape-determining protein MreD n=1 Ta... 89 6e-17 UniRef50_Q2SBH0 Cell shape-determining protein n=1 Tax=Hahella c... 88 8e-17 UniRef50_Q8D1V7 MreD protein n=1 Tax=Wigglesworthia glossinidia ... 88 1e-16 UniRef50_Q3SM35 Putative uncharacterized protein n=1 Tax=Thiobac... 86 4e-16 UniRef50_B0VS17 Rod shape-determining protein n=17 Tax=Acinetoba... 85 6e-16 UniRef50_A1STZ6 Rod shape-determining protein MreD n=1 Tax=Psych... 85 8e-16 UniRef50_Q1YU27 Rod shape-determining protein MreD n=1 Tax=gamma... 85 1e-15 UniRef50_P44476 Rod shape-determining protein mreD n=32 Tax=Past... 84 2e-15 UniRef50_D0L063 Rod shape-determining protein MreD n=1 Tax=Halot... 83 2e-15 UniRef50_B5EMQ8 Rod shape-determining protein MreD n=3 Tax=Acidi... 83 3e-15 UniRef50_Q31F49 Rod shape-determining protein MreD n=1 Tax=Thiom... 80 3e-14 UniRef50_A5WCI6 Putative uncharacterized protein n=1 Tax=Psychro... 79 4e-14 UniRef50_A5IGA1 Rod shape determining protein MreD n=5 Tax=Legio... 79 6e-14 UniRef50_A0L7I2 Rod shape-determining protein MreD n=1 Tax=Magne... 78 8e-14 UniRef50_C8PVZ5 Rod shape-determining protein MreD n=1 Tax=Enhyd... 78 1e-13 UniRef50_Q1QDJ0 Rod shape-determining protein MreD n=2 Tax=Psych... 78 1e-13 UniRef50_B0SG26 Cell shape-determining protein n=6 Tax=Leptospir... 75 7e-13 UniRef50_Q1LU39 Rod shape-determining protein MreD n=1 Tax=Bauma... 74 1e-12 UniRef50_A5CW44 Rod shape-determining protein MreD n=3 Tax=Gamma... 72 8e-12 UniRef50_C1F7C9 Rod shape-determining protein MreD n=1 Tax=Acido... 66 4e-10 UniRef50_Q0AWG6 Putative uncharacterized protein n=1 Tax=Syntrop... 66 4e-10 UniRef50_B2S393 Rod shape-determining protein n=2 Tax=Treponema ... 66 5e-10 UniRef50_C8PRS7 Rod shape-determining protein MreD n=1 Tax=Trepo... 66 5e-10 UniRef50_Q73N05 Rod shape-determining protein MreD n=1 Tax=Trepo... 66 5e-10 UniRef50_A4J7K3 Putative uncharacterized protein n=1 Tax=Desulfo... 65 6e-10 UniRef50_B1I4Q2 Putative uncharacterized protein n=1 Tax=Candida... 65 1e-09 UniRef50_Q9RH81 Rod shape determining protein MreD (Fragment) n=... 61 1e-08 Sequences not found previously or not previously below threshold: UniRef50_Q1IRN5 Putative uncharacterized protein n=1 Tax=Candida... 52 8e-06 UniRef50_A5D430 Cell shape-determining protein n=1 Tax=Pelotomac... 52 8e-06 UniRef50_A1HP02 Rod shape-determining protein MreD n=1 Tax=Therm... 49 5e-05 UniRef50_B8FVF2 Rod shape-determining protein MreD n=2 Tax=Desul... 49 6e-05 UniRef50_C8W5R8 Rod shape-determining protein MreD n=1 Tax=Desul... 49 6e-05 UniRef50_B7ANR5 Putative uncharacterized protein n=1 Tax=Bactero... 49 7e-05 UniRef50_Q01ZY2 Putative uncharacterized protein n=1 Tax=Candida... 49 7e-05 UniRef50_D1AAV7 Rod shape-determining protein MreD n=1 Tax=Therm... 48 1e-04 UniRef50_C0EWW6 Putative uncharacterized protein n=1 Tax=Eubacte... 47 2e-04 UniRef50_C5RGQ5 Rod shape-determining protein MreD n=1 Tax=Clost... 46 4e-04 UniRef50_D2BCD8 Putative uncharacterized protein n=1 Tax=Strepto... 46 5e-04 UniRef50_A8MHM1 Putative uncharacterized protein n=1 Tax=Alkalip... 46 6e-04 UniRef50_C9R8K4 Rod shape-determining protein MreD n=1 Tax=Ammon... 46 6e-04 UniRef50_C1QD51 Rod shape-determining protein MreD n=2 Tax=Brach... 45 8e-04 UniRef50_B4V3T9 Rod shape-determining protein n=18 Tax=Streptomy... 45 9e-04 UniRef50_C9KMZ2 Rod shape-determining protein MreD n=1 Tax=Mitsu... 45 0.001 UniRef50_C9L5U1 Rod shape-determining protein MreD n=1 Tax=Blaut... 45 0.001 UniRef50_A6TQI1 Putative uncharacterized protein n=1 Tax=Alkalip... 44 0.001 UniRef50_C7GE98 Rod shape-determining protein MreD n=12 Tax=Clos... 44 0.002 UniRef50_C4Z086 Putative uncharacterized protein n=1 Tax=Eubacte... 44 0.002 UniRef50_C7LYA8 Rod shape-determining protein MreD n=1 Tax=Acidi... 44 0.002 UniRef50_UPI00016C006C hypothetical protein Epulo_06690 n=1 Tax=... 43 0.003 UniRef50_A5Z699 Putative uncharacterized protein n=1 Tax=Eubacte... 43 0.003 UniRef50_Q3AF77 Rod shape-determining protein MreD n=1 Tax=Carbo... 43 0.003 UniRef50_D1BNE8 Rod shape-determining protein MreD n=3 Tax=Veill... 43 0.003 UniRef50_B0TBY4 Rod shape-determining protein, putative n=1 Tax=... 43 0.003 UniRef50_C0CHV5 Putative uncharacterized protein n=2 Tax=Clostri... 43 0.003 UniRef50_C9LXR8 Rod shape-determining protein MreD n=1 Tax=Selen... 43 0.004 UniRef50_UPI0000E87A9D hypothetical protein MB2181_01455 n=1 Tax... 43 0.004 UniRef50_Q2RL20 Putative uncharacterized protein n=1 Tax=Moorell... 43 0.004 UniRef50_Q1PZX3 Similar to rod shape-determining protein n=1 Tax... 42 0.004 UniRef50_B7GIQ3 Cell shape-determining protein n=1 Tax=Anoxybaci... 42 0.005 UniRef50_A5ZRS3 Putative uncharacterized protein n=1 Tax=Ruminoc... 42 0.005 UniRef50_B6ITQ9 Putative uncharacterized protein n=1 Tax=Rhodosp... 42 0.005 UniRef50_D1C5P2 Rod shape-determining protein MreD n=1 Tax=Sphae... 42 0.005 UniRef50_B9M5R2 Rod shape-determining protein MreD n=6 Tax=Geoba... 42 0.006 UniRef50_UPI0001BC32A8 hypothetical protein BcroD2_07178 n=1 Tax... 42 0.007 UniRef50_A8TM61 Putative uncharacterized protein n=1 Tax=alpha p... 42 0.008 UniRef50_C8WXL3 Rod shape-determining protein MreD n=2 Tax=Alicy... 42 0.008 UniRef50_B3E5W6 Rod shape-determining protein MreD n=1 Tax=Geoba... 42 0.008 UniRef50_A3JW84 Sensor protein n=2 Tax=Rhodobacterales bacterium... 42 0.009 UniRef50_A4U0U0 Cell shape-determining protein n=3 Tax=Magnetosp... 42 0.009 UniRef50_Q1JVG6 Rod shape-determining protein MreD, putative n=1... 42 0.009 UniRef50_B3T1Z2 Putative rod shape-determining protein MreD n=1 ... 41 0.010 UniRef50_Q2JIW7 Rod shape-determining protein MreD n=2 Tax=Synec... 41 0.012 UniRef50_C8WGI8 Rod shape-determining protein MreD n=1 Tax=Egger... 41 0.013 UniRef50_UPI0001C15A7A conserved hypothetical protein n=2 Tax=No... 41 0.014 UniRef50_B0M9U3 Putative uncharacterized protein n=2 Tax=Clostri... 41 0.016 UniRef50_B1GZB4 Rod shape-determining protein MreD n=1 Tax=uncul... 41 0.016 UniRef50_C5RUB4 Rod shape-determining protein MreD n=9 Tax=Therm... 41 0.017 UniRef50_A7HW07 Rod shape-determining protein MreD n=1 Tax=Parvi... 41 0.017 UniRef50_B8I6C4 Rod shape-determining protein MreD n=2 Tax=Clost... 40 0.023 UniRef50_C8WAG3 Rod shape-determining protein MreD n=1 Tax=Atopo... 40 0.032 UniRef50_C6P9K0 Rod shape-determining protein MreD n=1 Tax=Therm... 40 0.034 UniRef50_C4FYQ2 Putative uncharacterized protein n=1 Tax=Abiotro... 40 0.036 UniRef50_UPI0001BCE78D hypothetical protein SnoxA4_08100 n=1 Tax... 39 0.041 UniRef50_C0GEW2 Rod shape-determining protein MreD n=1 Tax=Dethi... 39 0.041 UniRef50_B9CK75 Rod shape-determining protein MreD n=1 Tax=Atopo... 39 0.045 UniRef50_Q2JDQ1 Rod shape-determining protein n=3 Tax=Frankia Re... 39 0.045 UniRef50_C1XP36 Rod shape-determining protein MreD n=2 Tax=Meiot... 39 0.048 UniRef50_C7HFS8 Rod shape-determining protein MreD n=3 Tax=Clost... 39 0.050 UniRef50_B1BCX2 Rod shape-determining protein MreD n=4 Tax=Clost... 39 0.050 UniRef50_A7VRP8 Putative uncharacterized protein n=1 Tax=Clostri... 39 0.051 UniRef50_Q0AN30 Putative uncharacterized protein n=1 Tax=Maricau... 39 0.058 UniRef50_A1AS30 Rod shape-determining protein MreD, putative n=1... 39 0.063 UniRef50_D1VM57 Rod shape-determining protein MreD n=1 Tax=Frank... 39 0.077 >UniRef50_A7C6B4 Rod shape-determining protein MreD n=1 Tax=Beggiatoa sp. PS RepID=A7C6B4_9GAMM Length = 163 Score = 125 bits (315), Expect = 5e-28, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 93/162 (57%), Gaps = 1/162 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M+S R G WVI LSF+++ +L I+P P +++RP+WV L+L+YW +A+P RV V TG+ Sbjct: 1 MSSERHHGGWVIILSFIVSFMLAIIPLPAWAVLWRPDWVALVLIYWCIAVPQRVGVATGW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G I D++ + LG L++ I Y+ ++ R LWQQA+ V L + I Sbjct: 61 FVGVIYDVLKDTLLGQNALSLCFIGYVSVKWHRQVRLFPLWQQAIGVFGLLSISHWIEAL 120 Query: 121 A-EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + ++ ++ +LWPW+F+++R +R+ + V Sbjct: 121 IYKNMLGYSLLTGSFISQVFISMILWPWVFVILRDMRRTYRV 162 >UniRef50_C4L8L5 Rod shape-determining protein MreD n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8L5_TOLAT Length = 163 Score = 123 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 60/156 (38%), Positives = 110/156 (70%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 G+ I+L+ ++A++L ++P P + +FRP+WV L++LYW++ALPH +NV + +++G I+ Sbjct: 8 HGKGSIYLTLIVAIILTMVPLPVAIDMFRPDWVALVVLYWVIALPHHLNVVSAWIVGLIM 67 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 D++ GSTLG+ L+M++I+ +VA +YQ RN ++WQQALV+ L V +++FW E L Sbjct: 68 DILLGSTLGIHALSMAVISCVVAAQYQKIRNFSVWQQALVMGSLIFVGQLLIFWVEHLFA 127 Query: 127 NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + W+S+ + +LWP ++L +R +R++F ++ Sbjct: 128 SPRLNTRFVWASLSSTLLWPSVYLFLRYIRRRFNIR 163 >UniRef50_Q2BKP8 Rod shape-determining protein MreD n=2 Tax=Gammaproteobacteria RepID=Q2BKP8_9GAMM Length = 166 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 59/155 (38%), Positives = 96/155 (61%) Query: 8 GRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILD 67 G ++I +FLI L+L +P P + RP WV +IL+YW++ALPHRV +G F +G +LD Sbjct: 12 GGFIILGTFLIGLMLSQIPLPYFIEWARPEWVAMILIYWVMALPHRVGMGMAFFLGLLLD 71 Query: 68 LISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVIN 127 +I GS LG+ L+++ IA+L L +Q R L QQA++VM+L + ++ W + Sbjct: 72 VIKGSVLGLNALSLTTIAFLTLLLHQRLRMFPLIQQAMMVMVLVGINQLLFHWMQAFTGF 131 Query: 128 VSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 +V+G+LWPW+F+++R VR+ F ++ Sbjct: 132 TGDSLIFLLPCLVSGILWPWLFVILRGVRRFFRIR 166 >UniRef50_A6VWN4 Rod shape-determining protein MreD n=2 Tax=Marinomonas RepID=A6VWN4_MARMS Length = 157 Score = 121 bits (303), Expect = 9e-27, Method: Composition-based stats. Identities = 57/157 (36%), Positives = 96/157 (61%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +V ++ L AL+L+ MP+P+ L+ FRP W LL++LYW++ALP RV VG + +G + Sbjct: 1 MKPIFVFCITLLTALMLEAMPFPEELVWFRPEWALLVILYWVIALPFRVGVGLAWFLGLM 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL+ G +G L IIAY A+ Y+ R WQQ + LL + ++ FW + + Sbjct: 61 VDLLQGGIIGQHSLTYVIIAYTCAVFYKRLRMYHRWQQGFFICLLVSINQLLDFWIDHYL 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + +F +V+ G+LWPW F+++R VR+ +A++ Sbjct: 121 GHAEPTLMIFMPAVITGLLWPWSFIILRSVRRIYAIR 157 >UniRef50_C7R9G4 Rod shape-determining protein MreD n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9G4_KANKD Length = 165 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 97/161 (60%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + G WVI LS +I ++L I P P+ FRP++ LI YW++ALPHR+ + F Sbjct: 4 MKNEVKHGTWVIILSLIIGMILDIFPLPETWQPFRPSFTFLIFSYWVIALPHRIGLLWAF 63 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 + G LD + G+TLG+ +++++ +++ L +Q R LW+QAL ++ LS++ IV W Sbjct: 64 ITGLALDALLGTTLGLHCFSLAVLTFILQLNHQRLRLFPLWKQALTLIFLSVIYFAIVLW 123 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 L + +++ NG+LWPW+F+L+R +R+ F V Sbjct: 124 LARLTGKPESDSWYWIATLTNGLLWPWLFVLLRDIRRYFHV 164 >UniRef50_Q47VG6 Rod shape-determining protein MreD n=4 Tax=Alteromonadales RepID=Q47VG6_COLP3 Length = 159 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 68/157 (43%), Positives = 109/157 (69%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 S ++I+L+ LIAL+ I P P ++ FRP+WVL++L+YW LALP+++N+ T +VMG I Sbjct: 3 SNNGFIIFLTLLIALMASITPMPLSVDAFRPDWVLIVLVYWCLALPNKINIFTAWVMGFI 62 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LD++ GS LGV AM++ Y+V + +Q RN ++WQQAL++ +LS ++VFW + + Sbjct: 63 LDVLLGSVLGVHACAMALSVYIVVVNFQKIRNFSVWQQALIIGVLSAQYHLVVFWLQRFL 122 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 +V F P + + VLWPW+FLL+R+VR+ F ++ Sbjct: 123 SDVVFLPNYLYPVITTIVLWPWVFLLLRRVRRHFRIE 159 >UniRef50_C6MDC7 Rod shape-determining protein MreD n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MDC7_9PROT Length = 191 Score = 119 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 73/149 (48%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 Y G W I S +I L+L +P +L++ RP++V L + YW + P+++ + F MG Sbjct: 30 YVPAGNWFIATSLIIGLILNFLPLQGDLLISRPDFVALAITYWNVNHPYKLGMSMAFGMG 89 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 ++D+ + LG LA S+I YL + + R +L +QA + L++ I++ Sbjct: 90 LMVDVGNAGILGQHALAYSVIFYLTLIFGRRLRLFSLLKQAPQIGFFLLIMQIVIILIAL 149 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLM 152 + F ++V +LW LM Sbjct: 150 SNGSALPGWGYFLATVTGTLLWAPASFLM 178 >UniRef50_Q2YC95 Rod shape-determining protein MreD n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YC95_NITMU Length = 173 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 78/155 (50%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 W I LS ++ALLL ++P +P++V L++LYW L P RV +G F MG + Sbjct: 14 PAKSWFIMLSLIVALLLNLIPVTGTARTLQPDFVALVMLYWYLNEPQRVGIGMAFWMGLL 73 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL + ST G L S++A++ + + ++QA + L+ L I+ A Sbjct: 74 MDLSNASTFGQHALGYSVMAFMALVFNRRMGIFEGYKQAPQIGLVLLSGQIVTLLAGLFA 133 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 + F S+V +LWP + ++R ++ ++ Sbjct: 134 GSPFPGWNFFLGSIVGMLLWPLLSAILRVPQKPWS 168 >UniRef50_Q15ZH1 Rod shape-determining protein MreD n=4 Tax=Alteromonadales RepID=Q15ZH1_PSEA6 Length = 158 Score = 117 bits (295), Expect = 9e-26, Method: Composition-based stats. Identities = 67/152 (44%), Positives = 105/152 (69%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 I LS ++AL+LQIMP P + +RP+WV L+L YW LALP RVNVG F++G +LD++ Sbjct: 7 TIGLSIIVALVLQIMPMPAIVEQYRPDWVFLVLGYWALALPERVNVGVAFIVGLVLDILL 66 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 G+++GV AMS+ +++A YQ RN ++WQQA+V+ +L + +++VFW L+ ++ F Sbjct: 67 GTSIGVHSFAMSLSVFVLAANYQRLRNYSVWQQAVVIGILCALYNLVVFWLMHLLTDIYF 126 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 W + + V+WPWIF L+R+VR+QF + Sbjct: 127 MLTYMWPVITSMVIWPWIFWLLRRVRRQFRLS 158 >UniRef50_Q0AFP8 Rod shape-determining protein MreD n=2 Tax=Nitrosomonas RepID=Q0AFP8_NITEC Length = 183 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 77/153 (50%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +I++S + A+L+ +MP+ ++V RP++V L LLYW + P + + F+ G Sbjct: 24 PARKSLIYISLITAVLINLMPFDKVILVLRPDFVALTLLYWNIYQPQQAGMSIAFISGLF 83 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+I S +G +A +I + + Y+ R +QQ V+ + L +VF L Sbjct: 84 MDVIDVSIMGQHAIAYCLITFFALILYRRLRLFNAFQQIPAVLWILLSGQGVVFLTGILA 143 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + +F +SV + WP + L+ R+Q Sbjct: 144 GSYIPEWYIFLASVTGALCWPLLVFLLGIFRKQ 176 >UniRef50_P0ABH6 Rod shape-determining protein mreD n=132 Tax=Enterobacteriaceae RepID=MRED_ECO57 Length = 162 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 162/162 (100%), Positives = 162/162 (100%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF Sbjct: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW Sbjct: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ Sbjct: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 >UniRef50_A0KFA9 Rod shape-determining protein MreD n=3 Tax=Gammaproteobacteria RepID=A0KFA9_AERHH Length = 161 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 79/159 (49%), Positives = 112/159 (70%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 + GR IW+S L+AL L I+P P L FRP+W+ ++L+YW LALPHR NVGT +V G Sbjct: 3 QPASGRIWIWISILLALSLSILPLPFQLEPFRPDWLAMVLIYWALALPHRTNVGTAWVAG 62 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 +LD++ GSTLGVR +AM+I YL A ++Q RN +LWQQAL++ LSLV + +FWAE Sbjct: 63 LLLDVLLGSTLGVRAMAMAITTYLAAFQFQKIRNFSLWQQALIIGCLSLVGKVTIFWAEH 122 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 L S FWS++ ++WPW+FL++RKVR++F ++ Sbjct: 123 LFSRASLNFAYFWSTLSTMLIWPWVFLVLRKVRRRFNIK 161 >UniRef50_C5SBR5 Rod shape-determining protein MreD n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBR5_CHRVI Length = 172 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 49/160 (30%), Positives = 79/160 (49%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + Q W I LS +A+ L I+P D +RP W +L +L+W A P RV + TGFV Sbjct: 12 SYKPRQPFWPIALSLTLAMYLTILPLSDWPWDYRPPWTVLAILFWCFATPRRVGIFTGFV 71 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G +LD+++G+ LG L++S+ AYL + R WQQA V L+ L ++ W Sbjct: 72 VGLMLDVLTGALLGQHALSLSVTAYLALVLRPRIRIFPPWQQAFFVALILLTERLLTLWI 131 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + S++V WP + L+ ++ + Sbjct: 132 IGATGQPMPALTYWISALVGLAFWPIMAWLLVPFERRLGL 171 >UniRef50_Q7NPY3 Rod shape-determining protein MreD n=2 Tax=Chromobacterium group RepID=Q7NPY3_CHRVO Length = 167 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 80/154 (51%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + R I +F+IA+L++++P P + P+++ L++LYW++ P RVN+G F+MG Sbjct: 11 KPVKRRFILTTFVIAVLIELVPLPHGSTRWLPDFIGLLILYWVINQPRRVNIGIAFLMGI 70 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 I D+ + G LA S+ A+L + + L QQALVV+ L L +I+ L Sbjct: 71 IADVSTAGLFGQHALAYSVTAFLALSRQRQLVMFNLGQQALVVLGLMLTNQLIMVVVRML 130 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + F ++ +LWP + LM +Q Sbjct: 131 TGSAFVGWSYFLPPLIGALLWPLLTKLMLIPYRQ 164 >UniRef50_C4K6Y8 Rod shape-determining protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K6Y8_HAMD5 Length = 162 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 97/162 (59%), Positives = 136/162 (83%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M+ Y+S+GRWVI+LSFLI ++LQIMPWP + +F+P+W+LLI +YW++ALPHRVN+GTGF Sbjct: 1 MSYYKSRGRWVIYLSFLIGIILQIMPWPQQIDMFQPSWLLLIFIYWVMALPHRVNLGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G I DL+ GSTLG+ L MS+IAYLV +K+Q FRN+ALWQQ L V+LLS+++ I VF Sbjct: 61 ILGLITDLLLGSTLGIHSLGMSMIAYLVTIKFQTFRNMALWQQTLFVILLSIIMTITVFL 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 EFL+I+VSF +F ++++NG++WPW+FLLMRK R++F VQ Sbjct: 121 TEFLIIHVSFNTGIFSNALINGIVWPWLFLLMRKTRRKFLVQ 162 >UniRef50_C6P2H4 Rod shape-determining protein MreD n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2H4_9PROT Length = 172 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 1/152 (0%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 I S +A++L +PW + RP++V L+LLYW PHRV +G +V+G Sbjct: 14 PASTSFIIFSLFVAVMLNWLPWHGWALALRPDFVALVLLYWCTHKPHRVGIGIAWVVGIF 73 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ S G LA +++A+ + ++ + L QQA+ V + L+ Sbjct: 74 SDVADASLFGQHALAYTVLAFGGIVLHRRVQMFDLRQQAMHVFPMLLLSYAAYAAV-HWQ 132 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + E F S V+ +LW + LL++ +R+ Sbjct: 133 VRGYVAWEYFLGSGVSALLWIPMTLLLQALRR 164 >UniRef50_Q5QWE3 Rod shape-determining protein n=2 Tax=Idiomarina RepID=Q5QWE3_IDILO Length = 161 Score = 114 bits (286), Expect = 9e-25, Method: Composition-based stats. Identities = 66/156 (42%), Positives = 96/156 (61%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 G + ++++IAL L +MP P FRP+W L++LYWI+ALPHRVN+GT V+G + Sbjct: 5 KPGFITLLITYIIALTLMVMPMPAAFDTFRPDWPTLVMLYWIIALPHRVNMGTALVLGVL 64 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++ GS +GV L M ++ Y A +Q RN AL QQALV+ +L + +VF A + Sbjct: 65 SDILLGSIVGVHALGMVVVTYFAARHFQRIRNFALIQQALVIAVLIFIKRFVVFEANVFL 124 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + F FW + + V W W+F L+RKVR+QF V Sbjct: 125 HDAEFTFSYFWPVLTSAVFWLWVFPLLRKVRRQFGV 160 >UniRef50_B2SMY7 Rod shape-determining protein MreD n=20 Tax=Xanthomonadaceae RepID=B2SMY7_XANOP Length = 161 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 79/152 (51%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R + W++ S IAL+L ++P P + RP W+ L+L YW++ P RV +G FV G Sbjct: 3 RMRNTWILPASIFIALVLGLLPLPTVVQPLRPYWLALVLAYWVIEEPDRVGLGLAFVAGV 62 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + DL+ G LG + L + I+ +++ R + QQAL + L L I+ Sbjct: 63 LADLLYGGLLGEQALRLVIMTFILQRFRARMRFFPMSQQALAIGGLLLNDRIVSSAVHLA 122 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVR 156 V + +W+ ++ VLWP +F+++ VR Sbjct: 123 VGEPTLPWSYWWAPLLGIVLWPPLFVVLDAVR 154 >UniRef50_C5BSY4 Rod shape-determining protein MreD n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BSY4_TERTT Length = 163 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 79/161 (49%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + + LS L+ ++P + RP + L++++W++ P ++ + GF+ Sbjct: 3 TPKQRNYALFLGLSIAFGLVFAVLPLTQDFSYLRPELLCLLVIFWVMNSPEQLGMTFGFL 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G + D++ G +A++IIAY+ + YQ R+ ++W Q+L V +L V ++V W Sbjct: 63 VGLLQDVVELGVWGGHAMALTIIAYICLMSYQRIRSYSVWHQSLWVFILVGVHQVVVNWV 122 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + + + +++ + WP + ++R + Q Sbjct: 123 QGIAGYRTPAHYLVLPTLMTALCWPLVVFFFLRIRHLYRTQ 163 >UniRef50_B7V018 Rod shape-determining protein MreD n=21 Tax=Pseudomonadaceae RepID=B7V018_PSEA8 Length = 164 Score = 111 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 90/161 (55%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 A+ S WVIWLS L+ L+L + P P + RP W+ ++L YW+L LP RV + T ++ Sbjct: 4 ATQGSNNVWVIWLSLLVGLVLAVAPMPTFTEIGRPLWLAMLLTYWVLLLPERVGMVTAWL 63 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G D++ G+ LG L + +I +LV +Q R WQQ LV++++ + ++ W Sbjct: 64 LGLAQDVLYGNLLGQNALILGLITFLVLSLHQRLRMFPAWQQCLVLVVVYGLAQLLQLWL 123 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 L N ++V+ +LWPW++ L++ VR + V+ Sbjct: 124 NALTGNRPPTLTFLLPALVSALLWPWVYALLQFVRLRLNVR 164 >UniRef50_Q60CK4 Rod shape-determining protein MreD n=1 Tax=Methylococcus capsulatus RepID=Q60CK4_METCA Length = 163 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 92/159 (57%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + R+ R +I+ S A+ ++I+P P + ++ P+W+LL+L+YW + P RV VGT ++ Sbjct: 3 RTRRTPSRILIFASLAAAMAMRIVPLPQDWALWNPDWILLVLIYWAVMAPDRVGVGTAWL 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 G + D ++G LG LA S++ Y+ ++ FR ++ QQ L V+LL + ++ W Sbjct: 63 TGLLADALTGRLLGQDALAYSVVIYVGVRFHRRFRVYSMVQQVLAVVLLLGLGLLLTLWT 122 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 + S +++++ G++WPW+ + + +R+++ Sbjct: 123 RHIRGLASAPEGYWFAALSGGLVWPWVRVALDGLRRRYG 161 >UniRef50_Q0KFF4 Rod shape-determining protein MreD n=12 Tax=Burkholderiales RepID=Q0KFF4_RALEH Length = 170 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 2/154 (1%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R I SF++A L +MPW L + P+ V L+L++W + P +V +G F++G Sbjct: 9 RPVNPAFIAFSFVLAFLFNLMPWGTTL--WVPDMVALVLVFWNIHQPRKVGMGVAFLLGL 66 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 ++D+ LG LA +++AY ++ ++ QAL V+ L VV + Sbjct: 67 LMDVHDARLLGEHALAYTLLAYFAITIHRRVLWFTVYTQALHVLPLLFVVHAVPVLIRLA 126 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + ++ + + +LWP L+ +++ Sbjct: 127 MGAPLPGWQLLLAPAIEALLWPLATSLLLAPQRR 160 >UniRef50_Q07WQ1 Rod shape-determining protein MreD n=21 Tax=Shewanella RepID=Q07WQ1_SHEFN Length = 163 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 108/163 (66%), Gaps = 1/163 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M+++ + GR V+WL+ I ++ QIMP P + +RP+W+L++++YW +ALPHR ++ T + Sbjct: 1 MSAHIANGRLVVWLTLFIGMMFQIMPLPKMVEAWRPDWLLMVMMYWAMALPHRYSILTAW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G +LD++ G+ LG+R LA+S++ Y+V L Q RN WQQ+L+V + ++FW Sbjct: 61 LLGVMLDVLLGAHLGIRSLALSLVIYIVVLLCQQLRNYPRWQQSLLVACFICIYHAVIFW 120 Query: 121 AEF-LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 +F +V F ++F ++ + +W W+F ++R +R+ + V+ Sbjct: 121 VQFVVVGAAPFNVDMFLPAISSLFIWWWVFWVLRNMRRHYKVR 163 >UniRef50_C0N753 Rod shape-determining protein MreD n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N753_9GAMM Length = 159 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 92/161 (57%), Gaps = 4/161 (2%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + S+ VI L+ ++A+LL ++P P+ FRP WV+L L+YW +ALPHRV++G G++ Sbjct: 3 TTAESRNGVVIILTLIVAMLLMLVPLPETARYFRPEWVVLTLVYWAMALPHRVSIGVGWL 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G ++D+ G TLG+ + + YL+A + R LWQQAL ++ + ++V Sbjct: 63 VGLLMDVTMGGTLGIMAFSYAFAVYLIARFHLQLRQYPLWQQALTILSVV----VVVHLV 118 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + ++ + + +LWP +F +RK+R+ F V Sbjct: 119 SVVTSKSESTWLIWMPVLTSTLLWPVMFATLRKIRRTFQVS 159 >UniRef50_B8GL91 Rod shape-determining protein MreD n=2 Tax=Thioalkalivibrio RepID=B8GL91_THISH Length = 163 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 57/159 (35%), Positives = 90/159 (56%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 S W I L+F++AL L ++P PD +RP W+ + L+YW +ALP R+ VG G+ + Sbjct: 2 SNPRGWVWAIPLTFIVALALTVVPLPDWAAPWRPQWLAMTLIYWSMALPRRIGVGLGWFL 61 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G +LD +G+ LG L ++IAYL +Q R LWQQAL V L + ++V W Sbjct: 62 GLLLDAATGALLGQHALGFALIAYLSIRMHQRVRVFPLWQQALTVGGLLALHLLLVLWIL 121 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + V + +LWPW+F+L+R VR+++ + Sbjct: 122 GMTGRAPGTWLYWAPLVSSMILWPWLFVLLRDVRRRWCL 160 >UniRef50_A4BLX4 Rod shape-determining protein MreD n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLX4_9GAMM Length = 134 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 74/133 (55%) Query: 30 NLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVA 89 RP W LIL+YW +ALP RV V + +G + D++ G LG LA S+ A+L Sbjct: 2 WAKPLRPEWTALILIYWCMALPQRVGVTVAWTVGLLQDVLQGFLLGAHALAFSVAAFLTL 61 Query: 90 LKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIF 149 ++ R LWQQAL +LL LV+ +I+ W L+ + + + ++ LWP +F Sbjct: 62 KLHRQIRVFPLWQQALSTLLLLLVIRLILLWTRGLIGHPGVDWQYWLPALTGAALWPPLF 121 Query: 150 LLMRKVRQQFAVQ 162 L +R VR++F V+ Sbjct: 122 LGLRAVRRRFQVR 134 >UniRef50_B5JU59 Rod shape-determining protein MreD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JU59_9GAMM Length = 155 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 ++ + ++A++ ++P P+ FRP+ V L+L+YW LA P ++ + TGF MG +LD++ Sbjct: 4 LVTTTLVLAVIFTLVPLPETAAWFRPDIVALVLMYWWLAHPEKIGIYTGFFMGLLLDVMQ 63 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA-EFLVINVS 129 GS LGV + IIA++ YQ R L L QQAL+V + L+ I FW + S Sbjct: 64 GSLLGVHGCGLVIIAWIFLKNYQRIRVLPLVQQALIVFFVLLIKYFIGFWVDNHRIQGFS 123 Query: 130 FRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 F + +LWPW+F+ +R +R++ Sbjct: 124 GTLLYFAPCLTGAILWPWLFVTLRDLRRR 152 >UniRef50_A0Z7H0 Rod shape-determining protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7H0_9GAMM Length = 160 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 50/156 (32%), Positives = 79/156 (50%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 +G WVI S LIALLL +P P + + P+W LL L YW+LALP+RV V + V+G + Sbjct: 5 RGSWVIVGSILIALLLVAIPVPVSWREYTPDWPLLFLFYWVLALPNRVGVLSACVVGILT 64 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 DL+ GS G + + ++ + YQ R +Q LV+ LL +V ++ E + Sbjct: 65 DLLDGSPAGATAIGAVMAVLVILVSYQRIRQFDGLKQGLVMALLISLVHLVEQRLETFLG 124 Query: 127 NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + V+ + W + +R R+ + VQ Sbjct: 125 WQHSSTAFLMPAAVSFLFWVPVRNCLRFFRRYYEVQ 160 >UniRef50_C7RML3 Rod shape-determining protein MreD n=3 Tax=Betaproteobacteria RepID=C7RML3_9PROT Length = 173 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 2/153 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 W I + LIALL +P + V P+WV L L++W + P RV +G F+ G Sbjct: 13 PVRPWFIASTLLIALLFNFLPTANWPGV--PDWVALALVFWCVREPRRVGMGLAFLFGLA 70 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ S LG LA ++AY + + L QQAL V L L+V ++ +V Sbjct: 71 MDVADASLLGQHALAYVLVAYGASSLSRRILWFPLGQQALQVFPLLLLVQLVQLGVRTIV 130 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 F + +LWP + ++ + Q Sbjct: 131 GADFPGLAYFVGPCLAALLWPLLTFVLLLPQHQ 163 >UniRef50_A4A5B4 Rod shape-determining protein MreD n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5B4_9GAMM Length = 161 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 91/160 (56%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 S R WVI S L A +L ++P L+ +RP W+LL+L+YW +ALPHRV + T V+ Sbjct: 2 SERMNAYWVILASLLFAAVLAVIPLTRALLWWRPEWILLVLVYWTIALPHRVGLVTALVV 61 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G +D++ G+ +G +L++S++ L L YQ R L QQ+ V+ LL+ + +I W + Sbjct: 62 GLFVDVMEGAVIGQNMLSLSVVVTLAGLMYQRLRVFTLVQQSSVIFLLAGLHQLITQWLQ 121 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 L + ++ +LWP + L+R++R+ + V Sbjct: 122 GLQGGAVPGFGFLFPALSTALLWPLLMPLLRELRRSYKVH 161 >UniRef50_A1WVS1 Rod shape-determining protein MreD n=2 Tax=Ectothiorhodospiraceae RepID=A1WVS1_HALHL Length = 163 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 1/163 (0%) Query: 1 MASYRSQ-GRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTG 59 M +R + G +I LSF+IAL+L I+P P FRP W LILLYW LALP RV VG G Sbjct: 1 MTGHRPRNGGGIILLSFIIALMLTIVPMPGWAQEFRPEWTALILLYWGLALPERVGVGVG 60 Query: 60 FVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVF 119 +++G D + G+ LG LA ++IA+L +Q R + +WQQA+VV+ L +V ++VF Sbjct: 61 WLVGLFQDALLGTLLGQHALAFALIAFLALRLHQHLRLVPVWQQAVVVLGLLVVAQLVVF 120 Query: 120 WAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 W ++ + + + + +V +WP +F +MR VR++F VQ Sbjct: 121 WINGIIGRPAPEWQAWAAILVGAAIWPLVFHIMRGVRRRFQVQ 163 >UniRef50_A4BGL4 Rod shape-determining protein MreD n=1 Tax=Reinekea blandensis MED297 RepID=A4BGL4_9GAMM Length = 161 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 89/162 (54%), Gaps = 1/162 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M G W+I ++F + L +P + RP+WV +++++W+L LP R + F Sbjct: 1 MKQKPPHGLWLIIITFFVGFFLAAIPM-GRFEIARPDWVGMLIIFWVLVLPERFGIFVSF 59 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G + D ++G+TLG+ S +AY V L + R L QQA+VV L+ V I+ W Sbjct: 60 GVGILFDTLAGTTLGLYAFVYSGLAYTVLLLHARLRMYPLGQQAMVVFLILGVTHIVAQW 119 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + +++V W ++ + V+WPW++ L+R ++ +F VQ Sbjct: 120 LKVWLMSVVSGELHIWPALTSAVVWPWVYGLLRTLQIKFRVQ 161 >UniRef50_C4GIM3 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIM3_9NEIS Length = 167 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 83/159 (52%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 Y + +I++SFL+A+L+ +P +L + P + L+L+YWI+ P V++GT F++G Sbjct: 8 YSKIQKRLIYISFLLAILIDFIPLSGSLFHWLPEFTALMLMYWIINRPQNVDIGTAFILG 67 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 ++D+ + ++LG LA I AY+V + QA+V+ L ++I+ + Sbjct: 68 LLMDIGTNASLGGHALAYVIAAYIVIQNRRQIVLYHYGVQAVVIFAALLCSEMILTVVRW 127 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + VF S VV +LWP + +M + + Sbjct: 128 RYTHHFYGWTVFLSPVVGALLWPLLNKIMVSLLNFLNSR 166 >UniRef50_Q1QVB9 Rod shape-determining protein MreD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVB9_CHRSD Length = 159 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 95/157 (60%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R G IWL+ +I+L LQ+MP PD +++RPNW+ L L YW + P RV V GFV G Sbjct: 2 RLPGLIAIWLTLVISLCLQVMPLPDAWLMWRPNWLGLALAYWCVTAPQRVGVFHGFVCGL 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 +LDLI G+ LG L +S++ YL L YQ R ++WQQA+++ +L ++ ++ W + Sbjct: 62 LLDLIEGTPLGQNALTLSLLTYLCLLLYQRLRAYSIWQQAVMLFVLLGLIQLVEQWLRTI 121 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 VS +++ G LWPW+F +M+ +R++ + Sbjct: 122 FGPVSIHLAFLLPALIGGALWPWLFTMMQVLRRRLGI 158 >UniRef50_B7RTI7 Rod shape-determining protein MreD n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RTI7_9GAMM Length = 162 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 90/162 (55%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M W++ SF AL+L ++P+P L RP WVLL+L+YW++ALP RV + T Sbjct: 1 MVDQGPNAYWLVLASFFCALILAVLPFPHWLAWGRPEWVLLVLVYWVIALPQRVGLITAL 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G +LD++ G+ +G A+ ++ L L YQ R +L QQA +V +L+ + +I W Sbjct: 61 LLGLMLDVVEGAVIGQNAFALVVVTLLALLLYQRLRVFSLAQQAAIVFVLAGLNQMICQW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + L S + + +LWP++ L+R +R+ + V Sbjct: 121 VQNLEGAGSTTLMFLLPAFSSALLWPFVLHLLRGLRRLYGVS 162 >UniRef50_A9N8Z0 Rod shape-determining protein MreD n=7 Tax=Coxiella burnetii RepID=A9N8Z0_COXBR Length = 162 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 90/161 (55%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M ++ I L+ ++A++L I+P P + ++P W+ ++LL+W++ALP+RV +G F Sbjct: 1 MEGNYAKDVLAIGLTLIMAMMLTILPLPAWAVWYQPAWIFMVLLFWMIALPYRVGIGAAF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 + G + DL+SG+ LG L +IIAY + R+L WQQ ++V + + V + +W Sbjct: 61 IWGLLFDLLSGTILGQHALIFTIIAYFIIRFQTPLRSLPNWQQMILVFIATAVYLALQYW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + + + +LWPW+ +L++ + +F + Sbjct: 121 IMAMADASPETAKYWLPLMSTTLLWPWVRVLLKDYQSRFRL 161 >UniRef50_Q21FT2 Rod shape-determining protein MreD n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FT2_SACD2 Length = 162 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 68/148 (45%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + +S AL+L I P P RP L+++YW++ P V T + Sbjct: 1 MPNLGLSFYIFFCVSAFFALVLSIYPIPHAYAALRPELFCLLVVYWVINYPQYFGVTTAW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +MG LD++ + G L ++ +AY+ YQ R+ +LWQQ L V + + +IV W Sbjct: 61 LMGLFLDVVHSTVWGAHALGLAAVAYICLSSYQRIRSYSLWQQTLWVFVFVGIHQVIVNW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWI 148 L + ++ V+ + WP + Sbjct: 121 MLGLSGYHKPTHIILVTTAVSALSWPVM 148 >UniRef50_B3PC04 Putative rod shape-determining protein MreD n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC04_CELJU Length = 161 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 68/140 (48%) Query: 23 QIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMS 82 + P P +RP +VL++ +YW+L +P V++ V+G DL+ G L + Sbjct: 22 SVYPLPFIWQWWRPEFVLVVAIYWMLNMPQSVSLVFLCVLGLFQDLLESVPFGQHSLGLI 81 Query: 83 IIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNG 142 I+AY+ L YQ RN W+QA V +L + + W + + + +V + Sbjct: 82 IVAYICFLSYQRVRNFPRWKQAGWVFVLVGIAQLTDNWVQSMAGRQLSGVAFLYPAVTSA 141 Query: 143 VLWPWIFLLMRKVRQQFAVQ 162 + WP+ + + ++ Q++ + Sbjct: 142 IFWPFCCVWLDRLCQRYQLH 161 >UniRef50_A9I0I9 Rod shape-determining protein MreD n=5 Tax=Bordetella RepID=A9I0I9_BORPD Length = 187 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 67/153 (43%), Gaps = 2/153 (1%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R +W + L+A LL ++PW + P+ + L+L +W + P RV + F G Sbjct: 27 RPAHGAFVWGTLLLAWLLSLLPW--RVWEGAPDILALVLAFWCVHEPRRVGLVAAFCFGV 84 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 ++D+ S LG L+ ++ AY ++ + LW QA+ ++ + + ++ Sbjct: 85 LMDVHDASVLGGHALSYTLTAYGAVALHRRLQRFDLWSQAMHMLPVFFLARLVQQMVLAW 144 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + + ++ +WP ++ ++ Sbjct: 145 LAGKWPGWDWTLGVLLTVAIWPLAGWVLHLPQR 177 >UniRef50_A1U482 Rod shape-determining protein MreD n=3 Tax=Marinobacter RepID=A1U482_MARAV Length = 158 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 80/150 (53%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 + ++ +++L+L I +P + FRP W+ LI+ YW P + + + +G +LD++ Sbjct: 9 LFAITVVLSLVLSISLFPVDWFQFRPEWLGLIVFYWTFRAPAQFGILMAWCLGLLLDILE 68 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 + LGV + M++IA+LV +Q R L QQ L+V LL + ++V + + L+ S Sbjct: 69 STPLGVNAMGMALIAFLVLTIHQRLRMYPLPQQCLMVFLLLGINQMLVHFVKQLLGAESA 128 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 W ++ + + WP + ++ + ++ Sbjct: 129 GFSYLWPALTSALAWPVVSGVLDTINRKLG 158 >UniRef50_B8KR95 Rod shape-determining protein MreD n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR95_9GAMM Length = 160 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 82/158 (51%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 R+Q WVI ++ ++ALLL P P FRP LL+L YW+LALP RV + + V+G Sbjct: 2 ERAQAVWVIPVTLMVALLLHAAPLPFEWRWFRPELPLLVLFYWVLALPQRVGLLSAAVIG 61 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 +DL+ GS LG L + + ++ YQ R L+QQ L++ LL + + W Sbjct: 62 IGIDLLEGSALGGLALGLVVSTLVLLFTYQRIRQFNLFQQCLLMGLLIALALTVENWVHK 121 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + + W ++V+ W I +R +R+ + V Sbjct: 122 FMALPTGGMQFLWPALVSMPFWAVIRKPLRGLRRYYGV 159 >UniRef50_C0DXR0 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXR0_EIKCO Length = 167 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 73/159 (45%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 S + + SFL+ LL+ +P P++ L++L YW+L P + +G F +G Sbjct: 8 KESTPKRWVAFSFLLVLLIDFIPVAPPWAYPLPDFTLIMLAYWLLHRPQLIGIGVAFCLG 67 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 ++D+ S S LG LA S+ A+L+ + + QA+ V LV ++VF Sbjct: 68 LLVDIGSNSLLGQHGLAYSVAAFLIERNRRQIVLNSFGWQAVAVAGAMLVSQLVVFLVSL 127 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 ++ S+V G+LWP + +M + + Sbjct: 128 FQQQPFPLWRLWLPSIVTGLLWPQLNNVMLAIAHYRRPR 166 >UniRef50_C1D5N3 MreD n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5N3_LARHH Length = 168 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 1/153 (0%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R + I LS +AL+++++P P++V L++LYW + P R +G F++G Sbjct: 9 RPVRKRWIALSLALALVVELLPLSGPAR-LTPDFVALLVLYWNINQPSRFGIGLSFLVGL 67 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 I D S +G LA ++I+YLV L+ + +L QQAL+V+ L L+ I++ A Sbjct: 68 IGDFFSAGLIGQHALAYTVISYLVLLRQRQIAMYSLGQQALIVLGLLLLSQAIMWLARMA 127 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + V F S V +LWP + ++ ++ Sbjct: 128 LGGVVVGWSYFMSPFVGALLWPLLTTILLWPQR 160 >UniRef50_C5V1V9 Rod shape-determining protein MreD n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1V9_9PROT Length = 170 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 1/153 (0%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R I S + ALLL +PW + P++V ++LLYW P R+ VG + +G Sbjct: 13 RPVSTMFIVTSIVTALLLNGLPWGGLWLTLHPDFVAVVLLYWCTHKPLRIGVGLSWAIGI 72 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + D+ S G LA +++A+ + + R L +Q V+++ + ++ Sbjct: 73 LADVGDASLFGQHALAYTLLAFGGVVLSRRIRMFDLREQTTQVLVILFSTYAVYALVQWQ 132 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 V F + + +LW + L + +RQ Sbjct: 133 VNGQIV-WTYFLGCLTSTLLWVPMSSLFQSMRQ 164 >UniRef50_Q21RI3 Rod shape-determining protein MreD n=66 Tax=Burkholderiales RepID=Q21RI3_RHOFD Length = 176 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 71/155 (45%), Gaps = 2/155 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNL--IVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 + IW S + ALLL ++ + P+ + L+L++W + P R+ +G FV G Sbjct: 12 PANPFFIWGSLVAALLLNMLQNMGLWGRAAWMPDLLALVLVFWSIHQPQRIGIGAAFVFG 71 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 +D+ G+ LG L+ +++++L ++ + QA V+ L + I Sbjct: 72 IFVDVHQGAMLGQHALSYTVLSFLAIAIHRRLLWFPVPSQAFQVLPLFVAAHAIALSVRM 131 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 L + + ++ +LWP + +L+ +++ Sbjct: 132 LAGGGFPGFWLLLAPLIESLLWPVVSVLLLMPQRR 166 >UniRef50_Q1GYC9 Rod shape-determining protein MreD n=3 Tax=Methylophilaceae RepID=Q1GYC9_METFK Length = 159 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 47/139 (33%), Positives = 72/139 (51%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 ++LS L+ALL+QI+PW +L+ RP ++LL +LYW L PH N+GT + G ++DL SG Sbjct: 9 VYLSLLVALLMQILPWSGSLLTIRPEFLLLTVLYWTLRAPHLCNIGTAWFAGLMMDLASG 68 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 G LA S ++ + +WQQA V LL L+ +I + Sbjct: 69 GLFGQFALAYSAASFFAVSYQRRLALFNIWQQAGYVFLLLLLSQVITLVLKLFSGGELPG 128 Query: 132 PEVFWSSVVNGVLWPWIFL 150 + F SV +LW ++ Sbjct: 129 WQYFLPSVSGILLWQFVTF 147 >UniRef50_Q0VS68 Rod shape-determining protein MreD n=2 Tax=Alcanivorax RepID=Q0VS68_ALCBS Length = 163 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 1/163 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M S R G VI ++ L+A LL+++P P ++ RP W+LL+L+YW+L LPHR+ V GF Sbjct: 1 MVSDRPAGTGVIIVTLLLAALLEVIPLPASIDWIRPEWMLLVLVYWVLVLPHRIGVLWGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G D++ G+TLG LA ++ A+++ Y+ R QQ V+ LL V ++ F Sbjct: 61 FVGLYHDVLVGTTLGQWGLATALGAFVMLAAYKRMRVFNGLQQCAVIFLLVGTVSLLAFL 120 Query: 121 AEFLVINVS-FRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + V + +SSV + ++W + ++R ++ +F V+ Sbjct: 121 VQESVGRTLYPPYTILYSSVSSALVWRPVCAVLRWIQLRFLVR 163 >UniRef50_A1K1T9 Rod shape-determining protein n=4 Tax=Rhodocyclaceae RepID=A1K1T9_AZOSB Length = 173 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 2/151 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 I+ S ++AL L +P V P+WV L+L +W + P R+ +G GF+ G + Sbjct: 13 PVRLGFIYFSLMVALALAYVPTGRFPGV--PDWVALVLAFWCIREPLRIGMGAGFLFGVL 70 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ G+ +G LA ++AYL + QAL V+ + L +++ + Sbjct: 71 VDIGQGAAMGQHALAYVVLAYLATGLARRVMWFPPLLQALHVLPMLLASQMLMVAVRLIA 130 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVR 156 F SS LW + L+ + Sbjct: 131 GAEFPGWAYFLSSFTAVALWVPLNYLLLLPQ 161 >UniRef50_C7I0H6 Rod shape-determining protein MreD n=4 Tax=Burkholderiales RepID=C7I0H6_THIIN Length = 178 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 2/153 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 W I LS L+ALL+ +P + P+ V L L++W + P RV + FV+G Sbjct: 18 PVNPWFIALSLLMALLIDFLPLGRLA--WMPDMVALTLVFWNVHQPRRVGMAVAFVLGLA 75 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ GS LG L ++++Y ++ A QQAL V+ L + +++ Sbjct: 76 VDVQQGSVLGQHALIYTVLSYFAITLHRRLLWFAPLQQALHVLPLFVATQVLLLLVGMWA 135 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + V LWP + L+ +++ Sbjct: 136 GGSFPGWAFLLAPFVQAALWPLLSWLLLAPQRR 168 >UniRef50_B5F9L8 Rod shape-determining protein MreD n=89 Tax=Gammaproteobacteria RepID=B5F9L8_VIBFM Length = 163 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 85/161 (52%), Positives = 120/161 (74%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 +S+ +GR +IWLSFLIAL LQ PWP L V RP+W++L+ YW+LALPHRVNVGT V Sbjct: 3 SSHLMRGRVIIWLSFLIALTLQAAPWPGALEVLRPSWIILVTFYWVLALPHRVNVGTAMV 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G + DL+ G+TLG+R + M+I+ YLVA +++ RNLALWQQA + L+L+ I+ F Sbjct: 63 LGILWDLLLGTTLGIRGMTMAILVYLVAANFKVLRNLALWQQAAIFSGLTLLGKILEFMG 122 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 EFLV +VSF W+ V+N +LWPW+FLLMR+VR+ ++++ Sbjct: 123 EFLVHDVSFNAHFLWAGVLNFLLWPWLFLLMRRVRRHWSIR 163 >UniRef50_Q1ZG63 Hypothetical rod shape-determining protein MreD n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZG63_9GAMM Length = 157 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 91/156 (58%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +I+++F +ALL I P P L FRP+W++LI+ YW+LA P R+ + F +G I Sbjct: 1 MRHYSIIYITFFVALLCAIFPLPIFLNAFRPDWMILIIFYWVLATPQRIGIVHAFFIGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LD++ GS LG+ L S++AY V + +Q R L Q L++ + +L + + ++W Sbjct: 61 LDILLGSMLGMHALLFSLLAYFVCVDFQRIRYFTLVQTTLLIGIAALCIKLSLYWIASTQ 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 ++ FWS + ++WPW FL +R VR +F V Sbjct: 121 QDILLHKSYFWSIFSSMLIWPWFFLFLRMVRIRFKV 156 >UniRef50_Q1MYL6 Rod shape-determining protein MreD n=1 Tax=Bermanella marisrubri RepID=Q1MYL6_9GAMM Length = 155 Score = 98.0 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 1/155 (0%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 VI +F +A +L ++P+P + RP WV + L++W + P R + GF MG + Sbjct: 1 MNAYAVILPTFFLAFVLSVLPFPRLIDFIRPEWVAMTLIFWCVLSPGRAGIFLGFFMGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++ G LG LA+S++ YL AL R QQ+ +V ++ + ++ FW E L+ Sbjct: 61 FDVLHGQLLGQSALALSVLGYLCALMQSRMRIYNPLQQSFMVFVMVGLYLLMSFWIESLM 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 V + + W SV + ++WP + L+ +RQ F Sbjct: 121 G-VDRKTALLWPSVGSALIWPLWYNLLFAIRQFFR 154 >UniRef50_Q7VRC2 Rod shape-determining protein MreD n=2 Tax=Candidatus Blochmannia RepID=Q7VRC2_BLOFL Length = 162 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 107/161 (66%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M ++ I+ SF +A++LQ + + +P+W +++L+YWI+ +P+++N+GTGF Sbjct: 1 MYNFYIYKICNIYCSFAVAIILQYVLFFSITWYLQPSWTMMLLIYWIVLIPNKINIGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G ILD IS STLG++ L+MSII+YL K LFR+ +WQQ++ ++L S + I F Sbjct: 61 FLGLILDCISCSTLGIQTLSMSIISYLTIRKIYLFRHTYVWQQSIFIVLFSFINQNIKFL 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 +FL+ +VS+ P++F++ +++G++WP + L+ K+ + Sbjct: 121 IQFLMFSVSYSPKIFYNCILDGIMWPVLIFLIHKINNSSKI 161 >UniRef50_C5TMH6 Rod shape-determining protein MreD n=5 Tax=Neisseria RepID=C5TMH6_NEIFL Length = 181 Score = 90.6 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 74/160 (46%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 SYR+ ++ S ++ ++L MP+ + + P L+LLYW L P R +G F + Sbjct: 22 SYRAVPLHIMAASLIVMMILDFMPFSFDGFFWLPEMTALMLLYWTLHQPQRAGMGLAFAI 81 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G I+D + +TLG+ L+ ++ Y + + + Q V+ L+ ++ A Sbjct: 82 GLIVDAATAATLGLHALSYVVMTYFILNRRRQIMLYGHIMQLAAVLAALLLNQAVLTVAR 141 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + + F + V +LWP + LM V + + + Sbjct: 142 LFLNHQVITLQGFVAPFVGALLWPILSQLMLIVTRIYRSR 181 >UniRef50_A4T0H0 Rod shape-determining protein MreD n=2 Tax=Polynucleobacter necessarius RepID=A4T0H0_POLSQ Length = 174 Score = 89.1 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 76/156 (48%), Gaps = 4/156 (2%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R I+ S ALLL ++P + + P+W+++ +++W + V+V T F++G Sbjct: 11 RPVNPVFIYFSLFCALLLNLLPIGNY--GWVPDWLIICMVFWNIHQHRYVSVITAFILGL 68 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 ++D+ + LG+ + S++AY+ ++ L + QA+ ++ + L+V + + Sbjct: 69 MMDVHNSDLLGLHAFSYSLVAYVAISWHRRIVALTVLSQAVHLLPVFLLVALFPVLVHWA 128 Query: 125 VINVSFRPEVF--WSSVVNGVLWPWIFLLMRKVRQQ 158 + + + + + +LWP ++ +++ Sbjct: 129 LSGELYWWALTGAVQAFIEAMLWPLATRILLAPQRR 164 >UniRef50_A8PNB8 Rod shape-determining protein MreD n=1 Tax=Rickettsiella grylli RepID=A8PNB8_9COXI Length = 161 Score = 89.1 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 81/153 (52%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + +SF A+LL I+P P +F P W+ L+L+YWI+ LP ++ + Sbjct: 1 MRPLYFSTLCFMVISFSGAILLNILPLPPMFALFFPLWLPLVLIYWIMVLPGHIHFTLAW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G +D++ GS LG LA+ ++AYL + FR + QQ L V ++ ++ I+ Sbjct: 61 LLGLFIDVLYGSYLGEHSLALCVVAYLAYRFHLQFRMFPVPQQMLFVFVMLIIYQTILIV 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMR 153 + + V V+ S +++ ++WP I L+R Sbjct: 121 TQAWLGFVIDFRWVWISLLMSALIWPLITYLLR 153 >UniRef50_UPI00016994A6 Rod shape-determining protein MreD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016994A6 Length = 106 Score = 88.7 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 42/98 (42%), Positives = 61/98 (62%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + ++ L+ +L +MP PD FRP WV LIL+YW +ALP RVNVGTG+ Sbjct: 1 MNANVQGRLYIAHLTLAFGFVLAVMPMPDWASNFRPQWVTLILIYWCMALPERVNVGTGW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNL 98 + G +LD++SGS LG LA++++++L YQ R L Sbjct: 61 LAGLLLDVLSGSMLGQHALALAVVSFLTLNIYQRVRVL 98 >UniRef50_Q2SBH0 Cell shape-determining protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SBH0_HAHCH Length = 157 Score = 88.3 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 73/150 (48%) Query: 8 GRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILD 67 + + +A + ++P FRP + +++ YW L P + G+ +G + D Sbjct: 7 RPVLFVFTLFLAFCVSLIPLGGFAAYFRPESICMVMFYWTLKHPGACGILVGWCVGLLWD 66 Query: 68 LISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVIN 127 ++ GSTLGV LA+++ AYLV Q + L QQ+ VV ++ +V ++ W L+ Sbjct: 67 VLMGSTLGVHALALALQAYLVLKMLQRLQMFPLIQQSFVVFIIVGIVLMLFRWINGLLAQ 126 Query: 128 VSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + ++ + +LWP LLM K+ Sbjct: 127 PATDMAYLLGALSSALLWPLFSLLMEKLEN 156 >UniRef50_Q8D1V7 MreD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D1V7_WIGBR Length = 168 Score = 87.9 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 97/161 (60%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M ++I+ FLI+L+LQI+ WP N + +P+WV +I +L P ++N+GTGF Sbjct: 1 MNKLNLIRIFIIYSLFLISLILQIISWPQNFNLLKPSWVYIIFSCLLLIYPEKINIGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G ILDL GSTLG+ +++S +AYL+ + + F +L++Q+L + +V + + Sbjct: 61 ILGLILDLHLGSTLGMHSISISFLAYLILINIKYFYKTSLFKQSLYISFFISIVKLSILI 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + ++ N + F + +++ ++WPWIF L++ + F V Sbjct: 121 IQLVISNTLLQINFFENILIDIIMWPWIFSLIKNILCYFNV 161 >UniRef50_Q3SM35 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SM35_THIDA Length = 166 Score = 86.0 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 68/145 (46%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 I S +A+L++ +PW +V RP++VL+ LL+W+L P RV G F +G I D G Sbjct: 14 ILGSLTLAVLVEQLPWSGLAMVLRPDFVLVALLFWVLHQPQRVGFGIAFFLGLIADFQDG 73 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + LG +A + YLV ++QA + + L V ++V +L +N Sbjct: 74 AALGQHGIAYVVGVYLVLYLRLRLLQFDPFRQAAQLFPVLLAVQLVVLLGGWLAVNPPAG 133 Query: 132 PEVFWSSVVNGVLWPWIFLLMRKVR 156 + + LW L++R Sbjct: 134 LAILMPVFGSTFLWYLSALVLRLWH 158 >UniRef50_B0VS17 Rod shape-determining protein n=17 Tax=Acinetobacter RepID=B0VS17_ACIBS Length = 163 Score = 85.3 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 2/154 (1%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 R W I LS ++ +L I P ++ +RP ++L+I+L+W++ P V F MG Sbjct: 10 KRKDPLWGIILSIIVGSVLMIYPLSYDISGWRPLFMLMIMLFWVVCQPTWCGVWFAFGMG 69 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 DL+ + LG+ L+ I+ ++ + R L + L ++ + W Sbjct: 70 IFTDLLLDAPLGLNALSFVIVTFITRFLIRERRILTFGN-LWTIATLVIIAHLAFMWVTQ 128 Query: 124 LVINVSFRPEVFWSSVVNGVL-WPWIFLLMRKVR 156 + + F W ++ +L WP ++ + K R Sbjct: 129 TMGGIHFSIARHWQPLMTSILTWPVVYYCLAKWR 162 >UniRef50_A1STZ6 Rod shape-determining protein MreD n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STZ6_PSYIN Length = 133 Score = 84.9 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 83/132 (62%) Query: 30 NLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVA 89 L FRP+W++LI+ YW+LALPHRV++ F++G + DL+ GSTLG+ L S +AY+V Sbjct: 1 MLNAFRPDWMILIIFYWVLALPHRVSIVHAFILGVVFDLLLGSTLGMHALLFSFLAYIVI 60 Query: 90 LKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIF 149 YQLFR L Q L+V L SL+ + ++ + ++ FWS + ++WPW F Sbjct: 61 TNYQLFRYFTLVQTTLLVGLYSLLSKLALYLMASSLQDIILHQSYFWSVFTSMLVWPWFF 120 Query: 150 LLMRKVRQQFAV 161 L +R +R++F V Sbjct: 121 LFLRFIRRRFKV 132 >UniRef50_Q1YU27 Rod shape-determining protein MreD n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YU27_9GAMM Length = 158 Score = 84.9 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 79/152 (51%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 + L+ ++A++L +MP + IV++PN++LL ++ W++ P V + +G + Sbjct: 5 NRGIAVCLTLILAVVLSLMPLSGDWIVWKPNFLLLTVMAWVMRWPDGVGIFFAASVGLLA 64 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 D++ + G V+ ++ A+ +AL + + L++ Q+ L+V L+ +V + Sbjct: 65 DILLRMSPGHSVIVFALCAFALALVSRWAKYLSMLQRTLLVALIISLVAMFEASLFIFYG 124 Query: 127 NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 S + +++ + WP+I L+ +++ + Sbjct: 125 RPSGIEYLPMKILLSMLAWPFIDRLVARMQPR 156 >UniRef50_P44476 Rod shape-determining protein mreD n=32 Tax=Pasteurellaceae RepID=MRED_HAEIN Length = 162 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 61/153 (39%), Positives = 102/153 (66%) Query: 10 WVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI 69 + I F+IA +L++ PWP + +P W++L+LLYW+LA+P++V++G F++G DLI Sbjct: 10 FTILSFFVIAFVLELAPWPVGFQMLKPAWLVLVLLYWVLAIPNKVSIGWSFLLGLTWDLI 69 Query: 70 SGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVS 129 GSTLGV L +S Y++A Y + RNL+LW Q+L+V+L ++ +++F EF + Sbjct: 70 LGSTLGVHALVLSTSMYIIAKNYLILRNLSLWFQSLLVVLFVFIIRLLIFLVEFSLHTAF 129 Query: 130 FRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 F + + +G+LWPW+FLLMRK+R++ + Sbjct: 130 FHWQAILGAFASGLLWPWVFLLMRKIRRKVKLH 162 >UniRef50_D0L063 Rod shape-determining protein MreD n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L063_HALNC Length = 155 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 73/149 (48%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 +I LS L+AL+L + P + P W+LL +LYW + P+ V + ++ G +LD+ S Sbjct: 7 MIPLSLLVALILTVEPSVPLYQHYSPQWLLLTVLYWCIREPNSVGLIVAWMSGLVLDVAS 66 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 LG L ++ A +V Q+ QQAL V LS + ++ W + + +++ Sbjct: 67 VGLLGANALLFTLSAAVVLGLRQMLFFTGPVQQALFVAGLSAIYLLLSLWMQGGISDLTM 126 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 N V WP I ++ +R+++ Sbjct: 127 LLHNLVRVASNLVAWPIILMVFHLLRRRY 155 >UniRef50_B5EMQ8 Rod shape-determining protein MreD n=3 Tax=Acidithiobacillus RepID=B5EMQ8_ACIF5 Length = 158 Score = 82.9 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 74/152 (48%) Query: 10 WVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI 69 V+ L F AL+ + +P P++V L+LLYW ++ ++ +++G + D++ Sbjct: 4 VVVVLGFFFALVAEAIPCGPFYASLHPDFVALLLLYWAISSASELSFTVVWLIGLLQDMV 63 Query: 70 SGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVS 129 G LG + +A ++ YL+ R+LA W+Q + +L L ++V+ + ++ Sbjct: 64 LGDVLGAQAIAGVVMIYLLYTGIARVRSLASWEQLFFIFMLLLAHRLLVWSWQAWAGTIT 123 Query: 130 FRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + ++ +LWP L + +R + Sbjct: 124 WHFSLLLGPLIGALLWPLFTLTLDYLRHALRL 155 >UniRef50_Q31F49 Rod shape-determining protein MreD n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31F49_THICR Length = 167 Score = 79.9 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 73/150 (48%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 +W++ S+ I++++ M I F P + LLILL+W + ++ ++ + F +G + D Sbjct: 14 KWLLIFSYFISVVIDSMMILSFNINFVPYFTLLILLFWSTQILNQTHLFSAFALGLLFDA 73 Query: 69 ISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINV 128 + LG L I +L+ F+ LWQQ+++V ++ + ++ V+ Sbjct: 74 SMNTPLGSHSLIFVTITFLMLRSRLRFKGYPLWQQSMIVGSYFIIFQAMSWFIFHPVLVG 133 Query: 129 SFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + + ++ ++WP + +M ++ + Sbjct: 134 NALLYYWIEPLLAILIWPVLTQVMHRLTHR 163 >UniRef50_A5WCI6 Putative uncharacterized protein n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WCI6_PSYWF Length = 162 Score = 79.5 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 1/149 (0%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 + SF+ A ++ I P + RP ++++L++W++ P V V T F +G I DL+ Sbjct: 15 VIASFVAASVVNIYPLSLDASKLRPMALIMVLIFWLIYKPRYVGVVTAFAIGIISDLLLD 74 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + LG + A I+A+ + Q + + L A V +L+V + W + F Sbjct: 75 TRLGQQGFAAVIMAFSLRFVGQYIKQVNLP-VAWTVATGALIVFQLTLWIVQYLTQNIFY 133 Query: 132 PEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 +S +V+ + WP +F + + +++ Sbjct: 134 ASAIFSLLVSVISWPLVFFGLHRFINKYS 162 >UniRef50_A5IGA1 Rod shape determining protein MreD n=5 Tax=Legionella RepID=A5IGA1_LEGPC Length = 159 Score = 78.7 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 74/138 (53%) Query: 14 LSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGST 73 L FL+AL L I+P P+ + +FRP WVLL++LY LP + + + G +LD++ + Sbjct: 10 LGFLVALALSILPMPELISIFRPPWVLLLVLYIEYYLPGKFKLTALLIAGLLLDVLLSTV 69 Query: 74 LGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPE 133 +G A+ ++ ++ + K + + +L QQ ++ + I+ + + L+ Sbjct: 70 IGEHSFALLLVTWIASTKSRRVQFFSLIQQVCLIGFFCFLYQSIIIFIDALLGFNYNLIM 129 Query: 134 VFWSSVVNGVLWPWIFLL 151 S+++ ++WPWI +L Sbjct: 130 PVASAILGMIIWPWIRVL 147 >UniRef50_A0L7I2 Rod shape-determining protein MreD n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7I2_MAGSM Length = 171 Score = 78.3 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 2/153 (1%) Query: 9 RWVIWLSFLIALLLQIMPWP-DNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILD 67 W+ LS ++A+ +Q + P VFRP+ +L+ L YW L P R G+ F G +D Sbjct: 10 PWLPLLSLMLAVAVQEVALPYQAWSVFRPDLLLVALFYWRLYRPDRCGPGSAFGAGVAVD 69 Query: 68 LISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVIN 127 L+SG +G+ L+ +I L+ R ++ LLSL+ +I LV Sbjct: 70 LLSGGPMGINALSKILITLLIRRFGPRLRATDAIFLVPILALLSLLDQMIQLGLATLVQG 129 Query: 128 VSFRPEVFWSSVVN-GVLWPWIFLLMRKVRQQF 159 R + VV+ ++ P + + + + + Sbjct: 130 WGVRWPLLLGRVVSTALVAPLVVGALIHIHRIW 162 >UniRef50_C8PVZ5 Rod shape-determining protein MreD n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVZ5_9GAMM Length = 161 Score = 77.5 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 1/156 (0%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + V+ +SF+IA +L + P + +FRP W++++L++W++ P + +G FV Sbjct: 7 KKTKQHLYIVMAISFIIASVLSVYPLSAEIALFRPMWMIMMLIFWLIFQPTLIGIGLAFV 66 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G DL++ S +G + L ++A+ + R L+ ++ L++ + Sbjct: 67 VGLFADLLTDSRIGQQALCAVLVAFFIKFVSGYLRQLS-SNLVWLLAGACLLIYQLGLIF 125 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 L F P++ ++ V+ ++WP + +M + + Sbjct: 126 LHLFTQGVFAPQLLYTVAVSTLIWPLLVAVMLRYTR 161 >UniRef50_Q1QDJ0 Rod shape-determining protein MreD n=2 Tax=Psychrobacter RepID=Q1QDJ0_PSYCK Length = 161 Score = 77.5 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 1/147 (0%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 VI LSF+IA L + P ++ RP ++++L++W+L P V + + F +G I DL+ Sbjct: 16 VIVLSFIIASSLSVYPLSPSMATLRPMIMIMVLIFWLLFQPRYVGIFSAFAIGLIADLLM 75 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 + LG + + +A ++ + R L A ++ L L + W + + F Sbjct: 76 DTHLGQQAFSAVAVALMIKVTSIYIRQLNTIS-AWIIASLGLFIFQASLWMLQMFVQDVF 134 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + +S +++ + WP + L +RK + Sbjct: 135 VAQSTFSLLMSIISWPLVLLTLRKFVR 161 >UniRef50_B0SG26 Cell shape-determining protein n=6 Tax=Leptospira RepID=B0SG26_LEPBA Length = 171 Score = 75.2 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 60/159 (37%), Gaps = 10/159 (6%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 + I + L+A L + RP+++++ ++++ L + GF G + D Sbjct: 5 KVFIIIGLLLAHFLNGSNVFELGNAIRPDFMVIFVVFFALRKGPMYGLWLGFFGGLLTDT 64 Query: 69 ISGS----------TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIV 118 G +G+ + +I+ Y+V + + ++ L+ V +I Sbjct: 65 ALGGEIGGDNLVYYKIGLHSFSYAIVGYIVGKGLRSSYTENYISITIYILGLTFVSRLIT 124 Query: 119 FWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + + + + + S+ N L P +F L + Sbjct: 125 YLLFLMFFHSNHSYSFLYVSLYNAFLGPALFFLFSWAYR 163 >UniRef50_Q1LU39 Rod shape-determining protein MreD n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LU39_BAUCH Length = 158 Score = 74.1 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 99/156 (63%), Gaps = 1/156 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDN-LIVFRPNWVLLILLYWILALPHRVNVGTG 59 M + Q WVIWL F +++ + + + +F P+W+ L+L+YW++ +R++VG Sbjct: 1 MTRFYRQYNWVIWLFFFFIIIILPIIPCNKPINLFWPSWLNLLLIYWVMVRQNRIHVGIV 60 Query: 60 FVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVF 119 F++ I+DLI GS LG+ L +SII Y+V +K + FRN ++QQ ++++L S + IV Sbjct: 61 FLISIIVDLIRGSKLGIHPLLISIIIYIVFIKIKFFRNKNIYQQVIIIILASAIAKFIVN 120 Query: 120 WAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKV 155 +L+++ S++ + SS+V+G+ WP + +MRK+ Sbjct: 121 ITNYLLLSNSWQTGILSSSIVDGIAWPLVLCIMRKI 156 >UniRef50_A5CW44 Rod shape-determining protein MreD n=3 Tax=Gammaproteobacteria RepID=A5CW44_VESOH Length = 156 Score = 71.8 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 1/154 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M R +++ ++F AL+L ++P L+ W+LL+ +YWI+ ++ Sbjct: 1 MNVQRRPYIFLMKITFF-ALILSVIPLNKLLLGASAFWLLLLYIYWIVYFSTKLKFFIAL 59 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G ++D++ G LG LA+ + ++ Q F L Q + + + S + + Sbjct: 60 ILGTLVDILHGDILGQNALALIFSSLFISNIKQSFFLSNLSTQQVYIFISSSIYLVFFLL 119 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRK 154 L +F + + +WP + L+ K Sbjct: 120 IFVLTQGFIINYYLFLAPFTSAFIWPVVQFLLSK 153 >UniRef50_C1F7C9 Rod shape-determining protein MreD n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7C9_ACIC5 Length = 172 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 4/126 (3%) Query: 37 NWVLLILLYWILALPHRVN-VGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 + LL+ +Y+ + + + G +G + D+ + LGV +A +II Y A Sbjct: 46 DLPLLVTIYFAITWRNPIGGTLCGAAIGILQDVPTQHPLGVYGIAKAIIGYFAASIGIRI 105 Query: 96 RNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWS---SVVNGVLWPWIFLLM 152 +L + L++ +LV IV+ E +I+ + + +VVN V+ +F L Sbjct: 106 DTESLGTRLLLIPAFTLVHGGIVWLLETHLIDQPYAWIWWLEGLHAVVNAVIGVMLFSLF 165 Query: 153 RKVRQQ 158 + R++ Sbjct: 166 DRARRR 171 >UniRef50_Q0AWG6 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWG6_SYNWW Length = 167 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L F LL + + P+ VL+ ++++ L R GF+ G + Sbjct: 1 MRYLLLFLLPFTAILLQSTIFSFYGIKGTLPDLVLVFVVFFALINGARGGTIYGFLCGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL G +GV L+ + AYLV + + V + + ++VF+ Sbjct: 61 EDLYLGRFIGVNALSKAFTAYLVGHFQDRVFKENILVALIAVFFSTFINSLLVFFLALFT 120 Query: 126 INVS 129 + Sbjct: 121 HDTF 124 >UniRef50_B2S393 Rod shape-determining protein n=2 Tax=Treponema pallidum RepID=B2S393_TREPS Length = 168 Score = 65.6 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 5/155 (3%) Query: 10 WVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI 69 W + SFL +++ + + + P+ VLL++L+ + + TGF+ G I D + Sbjct: 7 WSVGTSFLFSIVEMAVFVHVSYLSIMPDLVLLVVLFTSIHNGVVAGIWTGFIAGIIFDFL 66 Query: 70 SGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI--- 126 S S G+ + I ++V + ++ A++ + +V + Sbjct: 67 SISPFGLHSFVFTTIGFMVGKVQGRYHIDRVFAPAVLAGFAMIFKVGLVLVLRGVFGPNI 126 Query: 127 --NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 F +++ +N V P++F L+ F Sbjct: 127 QVYSVFSRQLWIEMTLNIVFVPFVFGLLNMFPTTF 161 >UniRef50_C8PRS7 Rod shape-determining protein MreD n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRS7_9SPIO Length = 166 Score = 65.6 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 5/163 (3%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R W I +FL+ + + + P+ +L++++Y L V GF G Sbjct: 2 RKVVLWTIAAAFLLGIFETAILSHIRFLPALPDLILILVVYIALHNGTVAGVTAGFFSGL 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 I D +S + +G+ +++ +L L Y+ + + ++ + + + I+F L Sbjct: 62 IFDFLSLAPMGLHSFVFTVLGFLYGLLYRKYNVRRFFFPFILGLSATFLKAGILFILNIL 121 Query: 125 VIN-----VSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + N V P +F+L+ F ++ Sbjct: 122 FGQSIQVYNLLALSFWIEAAGNAVCAPLLFMLLGLFPNAFEIK 164 >UniRef50_Q73N05 Rod shape-determining protein MreD n=1 Tax=Treponema denticola RepID=Q73N05_TREDE Length = 172 Score = 65.6 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 52/131 (39%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + W F I LL + + P+ VLL ++Y ++ + GF+ G Sbjct: 2 KKVILWTSLSVFFITLLQTAIFSHISFFTVLPDLVLLTVIYIAISNGSLTGLICGFIAGL 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + D +S + +G+ ++ YLV Y ++ + ++ L + +++F + L Sbjct: 62 LADFLSAAPIGLHSFIFTLTGYLVGKFYGIYNLNKVIFPCILGGLGFVFKVLLLFVLKIL 121 Query: 125 VINVSFRPEVF 135 +F Sbjct: 122 FGQNIHTYNIF 132 >UniRef50_A4J7K3 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7K3_DESRM Length = 166 Score = 65.2 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 54/135 (40%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + L + LL + + +P+ VL+ +++ R GF+ G Sbjct: 1 MRSIVFFLLITISLLLQSTVFTFLQVAGIKPDLVLMFVVFNGFLRGSREGAFLGFLAGLA 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ +GS +G+ L + YLV L F ++ ++V ++ +V +I++ F + Sbjct: 61 QDIFTGSYIGLNALTKMLAGYLVGLAETRFYKESVIIVSMVTFVVGVVNQVILYLLLFYL 120 Query: 126 INVSFRPEVFWSSVV 140 F ++ Sbjct: 121 NVEISPYYAFGQVII 135 >UniRef50_B1I4Q2 Putative uncharacterized protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4Q2_DESAP Length = 164 Score = 64.8 bits (157), Expect = 1e-09, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 51/110 (46%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 + +P+ VL++++Y+ + R GF+ G D +SG LG+ LA++ Y+V L Sbjct: 26 VAGVKPDLVLVLVVYYAIFNGPREGAFLGFLGGLAHDFLSGYYLGLNALAVAASGYVVGL 85 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 + + A + L +++V+ I + + E +W ++ Sbjct: 86 GHIRLFKENHFVVAGIAFLATILVEGIRYLLLLFLGVTILPGEAWWGLII 135 >UniRef50_Q9RH81 Rod shape determining protein MreD (Fragment) n=1 Tax=Pseudomonas fluorescens RepID=Q9RH81_PSEFL Length = 95 Score = 61.4 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 51/92 (55%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 MA+ S+ W++WL+F I +LL + P P + + RP W+ L+L +W L LPH+V + T Sbjct: 1 MANTHSRNGWIVWLTFAIGMLLSVSPLPQFMEILRPLWLALLLAFWSLNLPHKVGMVTAM 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKY 92 +G D++ G+ LG L + + L Sbjct: 61 FLGLAEDVLYGTLLGQNALITKVYSPLSMTLS 92 >UniRef50_Q1IRN5 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRN5_ACIBL Length = 176 Score = 51.7 bits (123), Expect = 8e-06, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 60/154 (38%), Gaps = 5/154 (3%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRV-NVGTGFVMGAILD 67 I L L +P + + LL+ +Y+ ++ + + + G ++G + D Sbjct: 23 PVAIVAPLLAIFLQAFIPIKIHFFDVF-DLPLLVTIYFAMSRRNPITGLLQGSIIGLVQD 81 Query: 68 LISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVIN 127 ++ +G+ +A +++ + + + + L+ + + + F ++ Sbjct: 82 SLTRDMIGMYGIAKTLVGFAASQLGAKIDSDNPSSRFLLTLGFYIGHQSVYFLIARGMVR 141 Query: 128 VSFRPEV---FWSSVVNGVLWPWIFLLMRKVRQQ 158 +V N +L ++F +M + RQ+ Sbjct: 142 QPIEWHWAHEMLGAVANALLAVFLFAVMDRFRQR 175 >UniRef50_A5D430 Cell shape-determining protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D430_PELTS Length = 163 Score = 51.7 bits (123), Expect = 8e-06, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 2/159 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + LL + ++ +P V+LI ++ L R GF G I Sbjct: 1 MPVFVFLLMVGAAVLLQTTVLEYAAIMGIKPELVMLIAIFNGFLLGAREGAFLGFAGGVI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL+SGS +G+ L+ + YL + F + + + + Sbjct: 61 EDLVSGSYIGLNALSCMVAGYLAGSGGERFFKENILVSTGIAFFSAAAGLTANYLLLMHA 120 Query: 126 INVSFRPEVFWSSV--VNGVLWPWIFLLMRKVRQQFAVQ 162 F + + LL + + F +Q Sbjct: 121 GIYLPALHAFLRVIFPSAAYTAVLLPLLFGRALRSFQIQ 159 >UniRef50_A1HP02 Rod shape-determining protein MreD n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP02_9FIRM Length = 164 Score = 49.0 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 43/131 (32%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + L + + + RP+ +L+I + L VG GF G I Sbjct: 1 MRTLVWSGLILITIIFQAAVIPLIGYKGVRPDLLLIIAVSTGLLFGKEQGVGVGFFAGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL SG+ G+ LA Y+ L + + L + +L I+ + Sbjct: 61 QDLASGNIFGLNTLAKMATGYVAGLAERKVFKENILLPVLATVAATLFHGAIIVVLLAGL 120 Query: 126 INVSFRPEVFW 136 VF Sbjct: 121 GYKVDIAAVFI 131 >UniRef50_B8FVF2 Rod shape-determining protein MreD n=2 Tax=Desulfitobacterium hafniense RepID=B8FVF2_DESHD Length = 169 Score = 49.0 bits (116), Expect = 6e-05, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 49/121 (40%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +I + +L + + + +P+ VLL +Y L G G + Sbjct: 2 RRNILIIVMLLFSLILPGTVFYFWSWGGIKPDLVLLFTIYMALHHRTLPGALWGLGAGML 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D G G+ L ++++A L Q + + AL+V L++ V + ++ + LV Sbjct: 62 ADFYLGRHFGMYALTLTVVALLSDWLSQRWYRENYFLIALLVFLVTFVGEGLIAFLNILV 121 Query: 126 I 126 Sbjct: 122 G 122 >UniRef50_C8W5R8 Rod shape-determining protein MreD n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W5R8_DESAS Length = 166 Score = 49.0 bits (116), Expect = 6e-05, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 5/129 (3%) Query: 35 RPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQL 94 +P+ VLLI++ + GF+ G D++SG+ +G LA YLV L Sbjct: 30 QPDLVLLIVILNAFLRGSKEGAFLGFLAGLCQDVLSGNYIGFNALAKMGSGYLVGLAESK 89 Query: 95 FRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWS-----SVVNGVLWPWIF 149 ++ V L S++ II + ++ + + N +L P F Sbjct: 90 LFKDNIFVLFGVTFLASVLCQIIYYLLLIILGVMVTPFWALLRIILPVAFYNTLLVPIFF 149 Query: 150 LLMRKVRQQ 158 L + R + Sbjct: 150 KLFYRSRIR 158 >UniRef50_B7ANR5 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR5_9BACE Length = 176 Score = 48.7 bits (115), Expect = 7e-05, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 41/105 (39%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 + PN++++I + + + TGFV G I DL S S +G+ +AM I Y Sbjct: 27 IGGISPNFLIIIPVLFGFLNGKTEGIYTGFVCGIIYDLFSYSIIGLSSIAMMFIGYFAGC 86 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVF 135 YQ + +V + + + FL+ N Sbjct: 87 FYQKYEEKEFLMPIAMVGAGDFIYGFLSYVVNFLLHNKLDVLYYL 131 >UniRef50_Q01ZY2 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZY2_SOLUE Length = 177 Score = 48.7 bits (115), Expect = 7e-05, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 61/158 (38%), Gaps = 5/158 (3%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRV-NVGTGFVMG 63 R I + L L +P + F LL+++Y+ + +++ + G ++G Sbjct: 20 RFHAWAYIVVPLLAILFQVYVPMFFQFLRFV-EMPLLVVVYFSIMQRNQITGLTIGALVG 78 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 D +S S LG+ + +++ Y A + L+ + + Sbjct: 79 LAQDSLSDSPLGMYGIVKTLVGYFAASVGVRLDVEHSLIRLLLCFFFYIFHQFFFWVMSH 138 Query: 124 LVINVSFRPEV---FWSSVVNGVLWPWIFLLMRKVRQQ 158 ++ + +V+N ++ ++F + ++R++ Sbjct: 139 ALLAKLGPFDWPGTVVQAVLNAIIGVFLFSFLDRLRER 176 >UniRef50_D1AAV7 Rod shape-determining protein MreD n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAV7_THECD Length = 193 Score = 47.9 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 11/147 (7%) Query: 21 LLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI--SGSTLGVRV 78 + +P P + P+ VLL ++ L + V GF G D++ + T+G Sbjct: 30 VANRLPLPGAVT---PDLVLLSVVALALTCGPLMGVVAGFGAGLAADIVPPADHTIGRYA 86 Query: 79 LAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVF--- 135 L +I YL L + V + +L ++ ++ + + Sbjct: 87 LVYCVIGYLCGLASDEMDR-SAVVPFFAVAVGALAGTVLYAGVGMMLGDPRADWHIVARV 145 Query: 136 --WSSVVNGVLWPWIFLLMRKVRQQFA 160 V + + P++ + + +++ Sbjct: 146 VPLQVVYDVLASPFVVWAVLRAMRRYE 172 >UniRef50_C0EWW6 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWW6_9FIRM Length = 171 Score = 46.7 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 53/135 (39%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 +G L F+ +L + L PN +L+++ + + + GF G + Sbjct: 2 KRGIVTAVLVFICFILQTSVFELIKLAGITPNILLILISSVAVMRGQKPGMIVGFFSGLL 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ GST+G + ++ +++ + +++ + L+ I++ L+ Sbjct: 62 MDIFYGSTIGGFAFLYMVFGFVDGFFNRIYYSDDNILPLVLIGVNDLIYGFIMYILCGLL 121 Query: 126 INVSFRPEVFWSSVV 140 N + ++ Sbjct: 122 QNHLRIIYYLKNIIL 136 >UniRef50_C5RGQ5 Rod shape-determining protein MreD n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGQ5_CLOCL Length = 164 Score = 46.0 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 58/154 (37%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + + + L + +P N+ + P+ +++ +L + + + G + G Sbjct: 2 KKIITIAVLIILLYIMDSTWVPLFINIYGYTPSLLMIFILSYSIINGSYEGIWVGAIAGI 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 D+ T GV ++ +L + ++V + + II+ ++ Sbjct: 62 FQDVFFIHTFGVNGFINVLLCFLAGHVGKSLFRQKRAVPTILVGFFTAIKQIIIMGYLYI 121 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + + S+ N +L +I+ + K+ ++ Sbjct: 122 YGASANIYTIIAPSIFNLILAFFIYKWIYKLCKK 155 >UniRef50_D2BCD8 Putative uncharacterized protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BCD8_STRRD Length = 176 Score = 45.6 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 53/157 (33%), Gaps = 6/157 (3%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 + + ++ +P P P+ VLL ++ + L GF G D+ Sbjct: 10 GVFLLVMVFQVTVVNRLPLPGEGA---PDLVLLTVVGYALVRGANAGAVMGFCAGLASDV 66 Query: 69 I--SGSTLGVRVLAMSIIAYLVALKYQLF-RNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 + + LG L + +I ++ + + L A V + + + + Sbjct: 67 LPPAAHVLGQHALVLCLIGFMAGRVVESYPDAGQLTTLACAVAGPLVAAGVGALLGDDRI 126 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + + N + P + + +V + V+ Sbjct: 127 SRSMLTATLPQAVLYNLLAAPPVVWAVTRVVRGPRVR 163 >UniRef50_A8MHM1 Putative uncharacterized protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MHM1_ALKOO Length = 165 Score = 45.6 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 58/139 (41%), Gaps = 7/139 (5%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVF-----RPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 I +S ++ +L ++ L F PN +++++ + + + GF +G + Sbjct: 3 FIIISIIV--VLNLILQSTTLQWFNILGTLPNTAIILVISFAVHSGKKQGAIIGFFVGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ G +G+ LA +I Y V L Q + ++ L ++ +++ FL+ Sbjct: 61 QDITFGRIIGMNALAYMLIGYTVGLTEQKIFKGNILIPIILTGLATIFYELMNLLLIFLL 120 Query: 126 INVSFRPEVFWSSVVNGVL 144 +F ++ ++ Sbjct: 121 GYRIELLNIFKKMLIVELI 139 >UniRef50_C9R8K4 Rod shape-determining protein MreD n=1 Tax=Ammonifex degensii KC4 RepID=C9R8K4_AMMDK Length = 163 Score = 45.6 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 6/138 (4%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 + RP+ +L++ + R G V G I DL++G +G+ L + YL Sbjct: 26 VAGVRPDLLLILAAFIGFWRGPREGGLWGAVAGLICDLVTGGFVGLNALTKLLAGYLAGQ 85 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI-----NVSFRPEVFWSSVVNGVLW 145 F + ALV ++LV +++ + + +F + + N + Sbjct: 86 AGAFFYRESSLTCALVTGSVTLVAELVTYLLLLFLGIRLPFKSTFVYLILPVTAYNAIAA 145 Query: 146 PWIFLLM-RKVRQQFAVQ 162 +F L R + ++F V+ Sbjct: 146 VVLFHLWQRLLPRRFKVR 163 >UniRef50_C1QD51 Rod shape-determining protein MreD n=2 Tax=Brachyspira RepID=C1QD51_9SPIR Length = 180 Score = 45.2 bits (106), Expect = 8e-04, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 + +P+ +L+ L++ + GF++G + D++S T G + I + V Sbjct: 29 ALGAKPDLLLIFLVFISFRYGSFDGIIYGFIIGLLQDIVSSGTFGSYAIIFLNIGFFVGF 88 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPE 133 +Q + ++LV +I A FLV ++ Sbjct: 89 FNTRIF----IKQIAAGIFVTLVGYLIKIIALFLVTSIYSDLS 127 >UniRef50_B4V3T9 Rod shape-determining protein n=18 Tax=Streptomyces RepID=B4V3T9_9ACTO Length = 243 Score = 44.8 bits (105), Expect = 9e-04, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 9/163 (5%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDN-LIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 R + ++AL++Q+ L P+ VLL ++ L H GF G Sbjct: 2 RFNRILLSATLVVVALVIQVSVLGRLQLPGAVPDLVLLTVVALALVYGHVSGALIGFGAG 61 Query: 64 AILDLI--SGSTLGVRVLAMSIIAYLVALKYQ-LFRNLALWQQALVVMLLSLVVDIIVFW 120 + DL + G L + +I YLV L R + W L V+ ++ ++ Sbjct: 62 LLADLAPPADHAAGRYALVLCLIGYLVGLARPDSGRFRSAWGPMLTVVAAAIGSTLLYAG 121 Query: 121 AEFLVI-----NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 LV +V +F +++ + +L P+ + + ++ Sbjct: 122 VGALVGDTAARHVGLTGLLFTATLYDLLLAPFTVPFIMALARR 164 >UniRef50_C9KMZ2 Rod shape-determining protein MreD n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMZ2_9FIRM Length = 164 Score = 44.8 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 51/138 (36%), Gaps = 1/138 (0%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 + + L AL ++P + +LL + RV +GF +G + DL SG Sbjct: 9 LAVIILYALQTSLLPL-IAYHGVTADLLLLFVTSTAFLKGARVGALSGFAVGLLQDLASG 67 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + LG+ ++ + V + + ++++ I+ L+ Sbjct: 68 TFLGMNAFTRLVLGFCVGKFSDQVFKEQFFLPVVASLVVTTANYFILALLMLLLGYRFNL 127 Query: 132 PEVFWSSVVNGVLWPWIF 149 +++ +++ +F Sbjct: 128 MGHMQYTLLPMLIYQLVF 145 >UniRef50_C9L5U1 Rod shape-determining protein MreD n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5U1_RUMHA Length = 177 Score = 44.8 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 2/135 (1%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M R VI L +L + ++ PN +L+I + + + GF Sbjct: 1 MRVKRRIVEAVII--LLCFILQGTVFQALSIGSITPNLLLIITVAFGFMQGKLSGLWIGF 58 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 G + D+ G+ LG L I Y ++F + + L+V + L+ +V+ Sbjct: 59 FCGILQDVFYGNLLGFYALIYLCIGYATGCCCKIFYDEEIRVPMLLVAVGDLLYGTMVYG 118 Query: 121 AEFLVINVSFRPEVF 135 +FL+ F Sbjct: 119 MQFLMRGRLEFFYYF 133 >UniRef50_A6TQI1 Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TQI1_ALKMQ Length = 165 Score = 44.4 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 48/120 (40%) Query: 21 LLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLA 80 L + + PN L++++ + + + + GF +G + D++ +GV L Sbjct: 16 LQSTIFQFFKIYNVVPNTALILVIAFAIHMGKQKGAVVGFFIGILQDILFSQIIGVNALV 75 Query: 81 MSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 + I+ Y V Q L ++ + ++ + I +L+ ++F ++ Sbjct: 76 LMIVGYFVGSMNQKIMRDHLAVPFVLTVGATVFYEFISVLFLYLLRYQVTILDLFSRVLI 135 >UniRef50_C7GE98 Rod shape-determining protein MreD n=12 Tax=Clostridiales RepID=C7GE98_9FIRM Length = 172 Score = 44.0 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 56/150 (37%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + V + + LL + PN ++++ + + + GF G + Sbjct: 2 RRKITVFIIIGVCYLLQTTFFDTLSFASISPNLLIIVTSSFGFMRGRKEGLFIGFFCGLL 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LD+ G LG L I Y+ + +LF + +++ L ++++++ FL Sbjct: 62 LDIFGGGVLGFYSLLYMYIGYINGMFRKLFYPEDIKLPLVLIAGSDLSCNLLIYFIMFLF 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKV 155 N F ++ +++ + + Sbjct: 122 RNRYDFNYYFLQLMIPELVYTMVITIFLYF 151 >UniRef50_C4Z086 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z086_EUBE2 Length = 177 Score = 43.7 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 1/129 (0%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 + L L+ + ++ PNW++++ +++ + GF G + DL Sbjct: 8 LILILFFYLMQVSLARVISIANISPNWLIILPVFFGFFAGKNEGMFVGFFAGIMYDLFFS 67 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 G L I Y YQ + + +V++ I + FL+ Sbjct: 68 GLFGFTALVFIYIGYFSGFLYQKYEVREILIPLALVIIADFGYGFISYIGNFLL-YNRLN 126 Query: 132 PEVFWSSVV 140 F S + Sbjct: 127 VGYFMSRFI 135 >UniRef50_C7LYA8 Rod shape-determining protein MreD n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYA8_ACIFD Length = 167 Score = 43.7 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 5/128 (3%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 ++ P+ V+ ++ GFV G +D + G+ L ++ YL Sbjct: 29 ILGVHPDLVMAMVAAIGAVRGRESGAIAGFVGGIAVDAFLSTPFGLSALIYVVVGYLAGE 88 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSV-----VNGVLW 145 ++ L + +VV L SLV + + AEFL+ + + VN V+ Sbjct: 89 VERIDGGAPLAVRWIVVGLASLVGEGLFVVAEFLLGLANPLQTRLVEQILVVGGVNLVIA 148 Query: 146 PWIFLLMR 153 P + L+R Sbjct: 149 PVVLGLVR 156 >UniRef50_UPI00016C006C hypothetical protein Epulo_06690 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C006C Length = 171 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 2/132 (1%) Query: 6 SQGRWVIWLSFLIAL--LLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 + RW I +S L+ L + + PN++ +I++ + L GF G Sbjct: 1 MKLRWFITVSILVLAFTLQNTLGDFVRIAGVSPNFLTMIVVAFSLLRGKNEGTIIGFFGG 60 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 I D+ G+ ++ II ++ + + L SL + + Sbjct: 61 VIYDISYSYIFGIYSVSYMIIGHMCGKLHHFCYRENKILPIMCTGLSSLFLSSVNILRFI 120 Query: 124 LVINVSFRPEVF 135 L+ N++F F Sbjct: 121 LIGNINFSYFYF 132 >UniRef50_A5Z699 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z699_9FIRM Length = 177 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 49/140 (35%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + + +L + PN +L++ + TG Sbjct: 1 MKRRVLNIVITGAIIIVSFVLQSYLSLVSGQSFVVPNLLLIVTSIFGFIKGSNYGSVTGL 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 G ++D+ G +G+ L I ++ + ++ + ++ LVV + + ++ + Sbjct: 61 FCGLLVDVAFGDVIGLFALIYMYIGFISGVFKKILYSDHIFMPMLVVFVNDFLYNLAYYV 120 Query: 121 AEFLVINVSFRPEVFWSSVV 140 FL+ N F ++ Sbjct: 121 FRFLLRNKLDFSYYFEKVIL 140 >UniRef50_Q3AF77 Rod shape-determining protein MreD n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF77_CARHZ Length = 161 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 51/157 (32%), Gaps = 5/157 (3%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + ++ Q + + +P+ +L++ + G G I Sbjct: 1 MSNLKAMLYFLFFYIIAQTVFSRLAVNGVKPDLILILTVILSFLYGPPRGAFFGMQGGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL +G +G+ L + +L + W ++V +L+ V D + L+ Sbjct: 61 EDLFTGHFIGLNTLVKMVTGFLAGVLEGKIYPENWWFPGVIVFVLTFVKDFLYVAFLNLL 120 Query: 126 INVSFRPEVF-----WSSVVNGVLWPWIFLLMRKVRQ 157 E F ++ N L P + + + Sbjct: 121 GINIALTEAFGRIMPVEALYNFFLTPVFYFFFYRAVR 157 >UniRef50_D1BNE8 Rod shape-determining protein MreD n=3 Tax=Veillonella RepID=D1BNE8_VEIPT Length = 164 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 51/140 (36%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + FLI + + + PN +L I++ L R+ + + + G + Sbjct: 1 MMRLALALCGFLIYFIQAQLLPTIFHTNWLPNLILTIIVMITLFKGRRMGLISAVIGGIV 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++ + G+ + I+ YL++ + + +V + +L+ +I + Sbjct: 61 HDVLISNFFGLHLFPYVIVVYLLSAVKHRIYEERWYWSSGIVAICTLLDGVIRSFMILAS 120 Query: 126 INVSFRPEVFWSSVVNGVLW 145 W V+ + W Sbjct: 121 GGDLHFGLYLWHMVLPVMFW 140 >UniRef50_B0TBY4 Rod shape-determining protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBY4_HELMI Length = 167 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 38/108 (35%) Query: 36 PNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 P+ VL+++++ + R G G LD+++G +G+ LA++ A L Sbjct: 31 PHLVLILVVFTAILKGGRFGSFFGAGAGLFLDMLTGRYIGLNALALAATAGLCGFIEGRL 90 Query: 96 RNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGV 143 L V+ ++ F F + + + Sbjct: 91 YKDNLLVPIGCVLAGTVAYHTFAFLLGSFAGLPFAVGGFFMTLLTQAL 138 >UniRef50_C0CHV5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CHV5_9FIRM Length = 176 Score = 42.9 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 36/93 (38%) Query: 48 LALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVV 107 L + + TGF G ++DL G G+ L + Y +++ + + V Sbjct: 44 LLRGKKTGMFTGFFCGILVDLFYGPVFGLYALIYMYLGYFSGFGCKIYYDDDMKVPMCFV 103 Query: 108 MLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 + L+ + V+ +FL+ F ++ Sbjct: 104 GIGDLLYNFAVYGLQFLLRGRLGFGTYFLKIMI 136 >UniRef50_C9LXR8 Rod shape-determining protein MreD n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LXR8_9FIRM Length = 166 Score = 42.9 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 3/144 (2%) Query: 8 GRWVIWLSFLIAL--LLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 R WL+F+IAL L + N +L++ + W L R GF+ G + Sbjct: 5 RRIFFWLAFVIALFVLQTSFFPVFSWNGVSVNLMLVLTVSWSLLYGARRGAFLGFMTGLL 64 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL +G G+ V A++II Y + ++ A+ M + V L+ Sbjct: 65 QDLTTGMFFGMDVFALTIIGYATGAFSRNVFKDPVFLPAMATMWATAAHYFFVLVLMLLL 124 Query: 126 INVSFRPEVFWSSVVNGVLWPWIF 149 F +++ + W +F Sbjct: 125 GYG-FSLLYVVKTLLPALCWNVLF 147 >UniRef50_UPI0000E87A9D hypothetical protein MB2181_01455 n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87A9D Length = 162 Score = 42.9 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 46/128 (35%) Query: 16 FLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLG 75 FL+ LL + P P++++ + +L + + T F G I D++ G +G Sbjct: 19 FLLTLLFSQINIPFISSGSLPDYLVAWSVGVMLLNNKQYGILTIFFAGLIADILIGQIIG 78 Query: 76 VRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVF 135 + ++ ++F + Q+ + ++L +V + + Sbjct: 79 QYAFTFILTYAILFFIQKMFAIQSYKQRTITGIILVIVALLTTNITSTTYQTNFHETSIV 138 Query: 136 WSSVVNGV 143 + + Sbjct: 139 LKLITTII 146 >UniRef50_Q2RL20 Putative uncharacterized protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RL20_MOOTA Length = 169 Score = 42.9 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 37/112 (33%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 L + + + ++L + L GF G + DL G +G+ L+ + Y++ L Sbjct: 26 LAGVKADLLTIVLTIYALFQGPSRGAVLGFGYGLLEDLYLGRYVGLNALSKMLTGYIIGL 85 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNG 142 ++ + ++V + L + ++ Sbjct: 86 GKDRLNQDNWLVPGIMAFFAIICQGLLVLFLTLLAGFRFPLLAGLEAVILPM 137 >UniRef50_Q1PZX3 Similar to rod shape-determining protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZX3_9BACT Length = 165 Score = 42.5 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 61/155 (39%), Gaps = 4/155 (2%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + I+L + N+ P+ +++++ + + NV T + +G Sbjct: 1 MRWITFFCILLCISLFQSTLMNWINIGTATPDLYFSLVVFYSFFIDVKRNVVTSWFIGIS 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL- 124 DL+S TLGV + + + + + L + LV + SL+ +++ + Sbjct: 61 KDLLSEGTLGVNAIFFVAVGFFIWSIRGVLFRGHLVTKILVTFIFSLLYNVLYALHTAIS 120 Query: 125 ---VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVR 156 S +F S + P++F L K++ Sbjct: 121 CRSADISSTIWMIFICSSYTAAVTPFLFYLFNKLQ 155 >UniRef50_B7GIQ3 Cell shape-determining protein n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GIQ3_ANOFW Length = 174 Score = 42.5 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 51/138 (36%), Gaps = 1/138 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + ++ + ++ + P +L+ +++ + + + GF Sbjct: 1 MNRLFLPFLVTVMFLLESIIVQLLSQPLFDVYLLVPRMLLVFIVFITIFIGQTEGMTYGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 + G + D+ LG A S+IAYL+A + W + ++ V+ + Sbjct: 61 IFGLLYDVAYTELLGAYAFAFSLIAYLIAKAMN-VFHKNAWTASFFAIVAIACVEWYAYA 119 Query: 121 AEFLVINVSFRPEVFWSS 138 + ++ + + F + Sbjct: 120 IQLVIGGTTMSVQTFLQA 137 >UniRef50_A5ZRS3 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRS3_9FIRM Length = 175 Score = 42.5 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 54/135 (40%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + + L+ + ++ PN +L++ + L + + TGF G + Sbjct: 2 KSKIVLFFTIIVCFLMQSTVLHLISIGSITPNLLLILCVSMGLMRGRKSGLWTGFFCGLL 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL GS G L +L ++++ + + L+ ++ + ++ V+ +FL+ Sbjct: 62 VDLFYGSVFGFYALIYMYAGFLSGYAFRIYYDDDIKVPMLLTAIMDFLYNLAVYALQFLL 121 Query: 126 INVSFRPEVFWSSVV 140 F +V Sbjct: 122 RGRLGLGVYFTRIIV 136 >UniRef50_B6ITQ9 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6ITQ9_RHOCS Length = 173 Score = 42.5 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 54/126 (42%), Gaps = 3/126 (2%) Query: 36 PNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 P +L+ ++YW + P + F++G + DL+ G+ LG+ L + AY + L + F Sbjct: 43 PPLMLMAVVYWAIHRPDLLRPTLVFLLGVLNDLLGGAPLGMTALVFVL-AYWLLLTQRRF 101 Query: 96 RNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP--EVFWSSVVNGVLWPWIFLLMR 153 + + + + V WA + ++ + ++ ++P ++ Sbjct: 102 FLGNSFLLLWIGFTMVALGAAAVQWAVYSLMAAELLTFRAAGFQVMLATAVFPLAAWVLM 161 Query: 154 KVRQQF 159 ++ + F Sbjct: 162 RLHRAF 167 >UniRef50_D1C5P2 Rod shape-determining protein MreD n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5P2_SPHTD Length = 211 Score = 42.5 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 63/157 (40%), Gaps = 4/157 (2%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R + + + A + + N++ PN +L+++L W + F +G Sbjct: 46 RVTRLFFALILIITAFVQITVFPVVNVLGIGPNLILVLVLVWSGLRGAPEGLLWVFPLGL 105 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 +LD+++ LG LA+ +A + L + + L + V+ +L ++ L Sbjct: 106 LLDVLTLDPLGSNGLALVPVALIGGLARRRLFHSGLIIPLVAVVGATLAHHVVTLLVSLL 165 Query: 125 VINVSFRPEV----FWSSVVNGVLWPWIFLLMRKVRQ 157 ++++N ++ P ++L + + + Sbjct: 166 AGTSYPFLASVRLGILTALLNVMVVPPMYLFVLLMER 202 >UniRef50_B9M5R2 Rod shape-determining protein MreD n=6 Tax=Geobacter RepID=B9M5R2_GEOSF Length = 161 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 2/134 (1%) Query: 9 RWVIWLSFLIALLL--QIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 ++V LS +IA+LL + L F PN ++++++Y L F +G + Sbjct: 3 KFVKALSIVIAVLLLQTTVFPYYLLAPFHPNLLVIMVVYLGLRSKSPFGALAAFSLGLLH 62 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 D SG G+ + I + + + + L V ++V + F+ Sbjct: 63 DCFSGIYFGLNGFSYLCIFHALHKTADRLYTDSRYLMVLTVFFATIVTGLFNMLLLFIFS 122 Query: 127 NVSFRPEVFWSSVV 140 + SS++ Sbjct: 123 AANGIYATLLSSLI 136 >UniRef50_UPI0001BC32A8 hypothetical protein BcroD2_07178 n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32A8 Length = 181 Score = 42.1 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%) Query: 17 LIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGV 76 L AL + ++ PN +L+ + TGF G ++D+++G +G Sbjct: 14 LYALQCTLFASTLSVAGITPNLILMFTCIVGYMRGRASGIFTGFFSGLLVDIMAGKIIGF 73 Query: 77 RVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 L + +L + ++ + L L+V+ + I VF FLV Sbjct: 74 TALLYMLAGFLNGIFHKEYVKEQLIFPILLVLSCDFLYGIAVFVTGFLV 122 >UniRef50_A8TM61 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM61_9PROT Length = 169 Score = 41.7 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 61/148 (41%), Gaps = 1/148 (0%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 I L+ L+A+L + P + + YW + P F++G + D+++ Sbjct: 19 IALTVLLAILSVVPIGVPGYATVVPAYTAMAAFYWAVFRPDLQPPFALFLVGVLQDILAA 78 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI-NVSF 130 + LG+ L++ ++ L + + F L +L+ + ++++ +++ Sbjct: 79 TPLGMTALSLMVVHGLALSQRRAFLGKPFALAWLGFLLIHGLSALLIWLLASMLVLQPIG 138 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + +V L+P + + ++ + Sbjct: 139 PEPAVFQYLVTVTLFPLVAWIFVRMHRY 166 >UniRef50_C8WXL3 Rod shape-determining protein MreD n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL3_ALIAD Length = 173 Score = 41.7 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 10/156 (6%) Query: 13 WLSFLIALLLQI-MPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 +++ I L+LQ + + V P++VL+IL+ L + + G +G I D+ G Sbjct: 7 FVTLWIGLILQATLFEIPPMDVIHPDFVLVILVLLALFRGANLAMVFGIAIGLIQDVCYG 66 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 +G+ A + AY+ A + F L L M LS V + + L S Sbjct: 67 PFIGLNAFAYGLTAYIAAAVFSQFMQKNLAIAFLTTMGLSFVHSWLTYGFMRLFELTSDS 126 Query: 132 PEVFWSS---------VVNGVLWPWIFLLMRKVRQQ 158 + S+ VV L+P + R++ Sbjct: 127 IQYALSASLQAMIVNGVVALALYPVYRAWFTRPRRR 162 >UniRef50_B3E5W6 Rod shape-determining protein MreD n=1 Tax=Geobacter lovleyi SZ RepID=B3E5W6_GEOLS Length = 162 Score = 41.7 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 52/132 (39%) Query: 13 WLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGS 72 L + LL + L +++P+ +L+++++ L P ++ + +G + D +SG Sbjct: 9 ALVLGVVLLQTSVLPQYLLSLYKPDLLLILMVFLALRAPVSTSLPAAYGLGLLKDCLSGL 68 Query: 73 TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP 132 LG+ + ++ ++ L V L + +I + + Sbjct: 69 YLGLNAFSFLLVYLVLKTLSDRLYVQNALLLVLTVSLSTFATMLINALLLSIFSEAAGIF 128 Query: 133 EVFWSSVVNGVL 144 ++++ +L Sbjct: 129 SSLMAALIPHLL 140 >UniRef50_A3JW84 Sensor protein n=2 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JW84_9RHOB Length = 1521 Score = 41.7 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 60/170 (35%), Gaps = 19/170 (11%) Query: 1 MASYRSQGRWVIWLSFL--IALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGT 58 M + L FL + L + + +VF +V++ L L VG Sbjct: 1 MTDNVKKIIAFFLLGFLSLVGNALNVELFFGARLVFSSVFVIIALF----TLGPWYGVGV 56 Query: 59 GFVMGAILDLISGSTLGVRVLAMSI----IAYLVALKYQLFRNLALWQQALVVMLLSLVV 114 F G ++ A I + +L RN +L A + +++ Sbjct: 57 AFFGGLYTIVLW-----QHPFAFIIYVAEAVFFAFTASRLNRNTSLI--AWDFVFWAIIG 109 Query: 115 DIIVFWAEFLVINVSFRPEVFWS--SVVNGVLWPWIFLLMRKVRQQFAVQ 162 + F + + +SF + +NG++ I L+ + +++ ++ Sbjct: 110 IPLTFVLFSIFLELSFSTIALIAFKETLNGLINVLIASLLLILGRKYFLK 159 >UniRef50_A4U0U0 Cell shape-determining protein n=3 Tax=Magnetospirillum RepID=A4U0U0_9PROT Length = 171 Score = 41.7 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 57/155 (36%), Gaps = 3/155 (1%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 + + ++ ++ LL I L P L+ + YW + P + + F++G + Sbjct: 14 RHLVPVGVTLMLLLLTAIPTRIPGLSGIIPMLPLMGVYYWAIYRPDLLPAWSAFLIGLLY 73 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE--FL 124 D+I G+ LGV L + + +A + F + A L W L Sbjct: 74 DIIGGTPLGVNALVL-LSVQGIAAGQRRFFLGKSFMVAWWAFGLLAAAAAGATWLLVTIL 132 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 V + ++ L+P + + + + F Sbjct: 133 YGQALDASPVIFDYLLTMGLFPLLTWTLARTQMAF 167 >UniRef50_Q1JVG6 Rod shape-determining protein MreD, putative n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVG6_DESAC Length = 169 Score = 41.7 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 53/146 (36%), Gaps = 5/146 (3%) Query: 16 FLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLG 75 L LL + RP+ VL++ LY + T +++G +LD+ SG+T G Sbjct: 12 LLFILLQTSLFPALVGNGPRPDLVLILTLYLGIHSSPLQGAFTSWLLGCLLDVFSGTTFG 71 Query: 76 VRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP--- 132 + L + ++ L + +L + D+++ + Sbjct: 72 LYGLILLLVFCATYLGGRQLNRDNAAVMFFAAVLGTAAHDVLLITTLLFFADADQGWRIV 131 Query: 133 --EVFWSSVVNGVLWPWIFLLMRKVR 156 ++ ++N + +R+ R Sbjct: 132 LFQLPMQLLLNILAVLVATPFLRRTR 157 >UniRef50_B3T1Z2 Putative rod shape-determining protein MreD n=1 Tax=uncultured marine microorganism HF4000_133G03 RepID=B3T1Z2_9ZZZZ Length = 168 Score = 41.3 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 51/112 (45%) Query: 41 LILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLAL 100 +++ YW+L P + G F+ G I D++ G +G+ L + IIA + A + +L Sbjct: 44 ILIYYWVLKQPQVLGYGFIFLSGIITDVVFGLPIGISALTLLIIASVAAYVRAVTVRPSL 103 Query: 101 WQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLM 152 + + L+ + I F + F +S+ + +P+++++ Sbjct: 104 LYDWMSFIPALLIANFIYFIVLYFSNYSIDYLYFFKNSIFTFLFYPFLWVIF 155 >UniRef50_Q2JIW7 Rod shape-determining protein MreD n=2 Tax=Synechococcus RepID=Q2JIW7_SYNJB Length = 214 Score = 41.3 bits (96), Expect = 0.012, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 6/118 (5%) Query: 13 WLSFLIALLLQIMPW----PDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 ++ L LL + PW L P+W L+ ++ W + G +G + D Sbjct: 16 VVTALSGLLAAVAPWWRGPGLELAGLTPDWPLIWVVCWSVRRKAWQGAVAGVTLGFLQDA 75 Query: 69 ISGSTLGVRVLAMSIIAYLVALKY-QLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 ++ S L ++++ L A Q + AL+V + ++ + ++ + Sbjct: 76 LT-SPCPTHALGLAVVGILTAKLQKQRYMQEDFISVALIVFGMVVIAETLMALQWMWL 132 >UniRef50_C8WGI8 Rod shape-determining protein MreD n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGI8_EGGLE Length = 175 Score = 41.0 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 10/156 (6%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIV-FRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + VI + ++ALLLQI+ P+ + +PN++L +L +A P F +G + Sbjct: 5 REGIVIAVGAVVALLLQIVVAPNIALFSAQPNFLLAYVLVVAIARPLDAGSALPFALGLV 64 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL+ +G I++++ + + + N L+ + ++ + +++ + Sbjct: 65 CDLLGSGPVGGYAFLFVIVSFIASRAFSVLDNDTLFMPVTIFVVATFAAEMLYGALLIGL 124 Query: 126 INVSFRPEVFW---------SSVVNGVLWPWIFLLM 152 + + F VV VL+P I L+ Sbjct: 125 GLSASPVDAFLYRALPCTLYDCVVGLVLYPIIARLL 160 >UniRef50_UPI0001C15A7A conserved hypothetical protein n=2 Tax=Nostocaceae RepID=UPI0001C15A7A Length = 212 Score = 41.0 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 2/128 (1%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + + L L+ L+ PNW L+ L+ W + P V G + Sbjct: 35 SRQGLNWVIIFISVLLCLLMSPTRFLGMELLGIAPNWALIWLVAWSVKRPAISGVFAGII 94 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQ-LFRNLALWQQALVVMLLSLVVDIIVFW 120 MG + D ++ S ++++I+ L + + F AL+V ++ L+ + + Sbjct: 95 MGLLQDALT-SPHPSHTVSLAIVGILTSRLQKHRFIQEDFISIALIVFIMVLISNTVFVV 153 Query: 121 AEFLVINV 128 F N Sbjct: 154 QLFFTNNS 161 >UniRef50_B0M9U3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0M9U3_9FIRM Length = 172 Score = 41.0 bits (95), Expect = 0.016, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 46/130 (35%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + I LL + L PN +L++ + L + +G GF G + Sbjct: 5 KRTLFYILSVIFCFLLQTSVFQFLKLADVMPNVLLILTVTLGLIRGKKAGIGIGFSCGLL 64 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ G LG L +I Y+ F + ++++ +L +F+ F + Sbjct: 65 IDIFFGDVLGQYALLYLLIGYINGCFNSFFYEDDVLLPFGLLVINTLAYSFAIFFFFFAL 124 Query: 126 INVSFRPEVF 135 Sbjct: 125 RGRFAFFSYL 134 >UniRef50_B1GZB4 Rod shape-determining protein MreD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZB4_UNCTG Length = 168 Score = 40.6 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 55/131 (41%), Gaps = 6/131 (4%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 + PN++L+ ++Y L+ GF+ G D+ S G+R + ++I YL Sbjct: 27 IYGIFPNFILIFVVYLGLSKGIINTQLMGFLFGLTWDVFSTDIFGIRTVMFTVIGYLAGR 86 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDI---IVFWAEFLVINVSFRPEVF---WSSVVNGVL 144 + F ++ Q +++ + + ++++ N +F + +V Sbjct: 87 FCKDFDREKIFTQIVIMFFAGAIYWLGFGLIYFIFLDNGNCAFSFSILSVSSKILVTATF 146 Query: 145 WPWIFLLMRKV 155 P +F ++ K+ Sbjct: 147 APLVFYILEKM 157 >UniRef50_C5RUB4 Rod shape-determining protein MreD n=9 Tax=Thermoanaerobacter RepID=C5RUB4_9THEO Length = 172 Score = 40.6 bits (94), Expect = 0.017, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 50/119 (42%) Query: 22 LQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAM 81 + ++ +P+ V +++L + L + G I D++ + LGV ++ Sbjct: 17 QATLFRFIDIFGVKPDAVFIVVLSFSLLNGSWEAIYLSLFGGLIQDILFNNALGVTTFSL 76 Query: 82 SIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 I++Y+ L + + + + V L +L+ +++ ++ L+ F + + Sbjct: 77 LIVSYITGLLSKSVFKESSFVAFVFVFLGTLLYNLVTMFSMVLMKYEFNFLLDFMNIAM 135 >UniRef50_A7HW07 Rod shape-determining protein MreD n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HW07_PARL1 Length = 177 Score = 40.6 bits (94), Expect = 0.017, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 2/112 (1%) Query: 20 LLLQIMPWPDNL-IVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRV 78 +LL +P + P + L+ + YW + P F +G I DL+SG +G+ Sbjct: 32 VLLSFVPLGRIVGSPLTPAFPLMAIYYWAIVRPEMFPPLAVFTVGLIFDLLSGGAIGLWA 91 Query: 79 LAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 ++ Y V + ++ A + + L++ + W + + F Sbjct: 92 FVY-VVTYAVVISQRMLVMNAPFSVFWIGFLVAAAFAGALAWGVVSISHGMF 142 >UniRef50_B8I6C4 Rod shape-determining protein MreD n=2 Tax=Clostridium RepID=B8I6C4_CLOCE Length = 170 Score = 40.2 bits (93), Expect = 0.023, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 65/161 (40%), Gaps = 7/161 (4%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVF--RPNWVLLILLYWILALPHRVNVGTGFVMG 63 + + +++ + + + +++ +F PN V+++++ L GF G Sbjct: 1 MRNKVILYAILIFIFVTAQVTLLNSITIFGVAPNLVIILIVSISLLKGKTDGAVVGFSAG 60 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 +D + G LG L ++ L+ + + A L + + + + + + Sbjct: 61 LCMDAVIGVALGYHALVGMLLGLLLGNINKRLFKENILVMAFCTFLSTYIFESAILFTSY 120 Query: 124 LVI-----NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 L+ + +F S+VN VL +FL++ + + F Sbjct: 121 LMGLKVEFFTILKTVIFPESLVNCVLGVIVFLVIILLNRGF 161 >UniRef50_C8WAG3 Rod shape-determining protein MreD n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8WAG3_ATOPD Length = 186 Score = 39.8 bits (92), Expect = 0.032, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 2/144 (1%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPD-NLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 S R++ I + +I +LQI+ P + N+ L+ L + V GFV Sbjct: 4 SDRNKNVRSITILAVICFILQIVLTPQVSFGGGVINFALIFSAAIALKYGGKTGVVCGFV 63 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 G I DL S + +G+ L + + +Y + + + + +V+L + V + Sbjct: 64 SGLIYDLTSANPIGLMALLLVVSSYFIGQEVRDRISGNFGTSMGLVVLQTFGVTFMYQLI 123 Query: 122 EFLVI-NVSFRPEVFWSSVVNGVL 144 L+ +F + + S + Sbjct: 124 NSLIGSGGNFLEGLLFKSFPTMLF 147 >UniRef50_C6P9K0 Rod shape-determining protein MreD n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9K0_CLOTS Length = 173 Score = 39.8 bits (92), Expect = 0.034, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 58/130 (44%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L + +L + ++ +P+ +L++++ + L + G + Sbjct: 1 MRSIYKYLLIIFVIILQATLFRYIAILGVKPDALLILIIAFSLLNGPNEGILLSLFGGIL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D++ + +G +++ +AYL L + + + + V L +++ ++I+ ++ L+ Sbjct: 61 VDVLFNNAIGFVTISLLSVAYLTGLLSKNVFKESTFVAFVFVFLGTILYNLIMVFSMLLM 120 Query: 126 INVSFRPEVF 135 P +F Sbjct: 121 KYDINPPYLF 130 >UniRef50_C4FYQ2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYQ2_ABIDE Length = 169 Score = 39.8 bits (92), Expect = 0.036, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 52/135 (38%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + ++ L+ + + +PN V+++++ + GF MG Sbjct: 2 KRIIGSFIMMIILYLIQTTIFNKIAIAGIKPNVVIILVVAIGYKYGKIPGMMMGFFMGLF 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LDL +G + I YL+ +L+ + +V LV++ ++F FL+ Sbjct: 62 LDLSESDYIGYYAVIYLTIGYLLGFGNKLYSGESNLIPIGLVGASDLVLNFLIFVTGFLL 121 Query: 126 INVSFRPEVFWSSVV 140 N P ++ Sbjct: 122 RNRLDFPYYIMRIIL 136 >UniRef50_UPI0001BCE78D hypothetical protein SnoxA4_08100 n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCE78D Length = 165 Score = 39.4 bits (91), Expect = 0.041, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 39/114 (34%) Query: 36 PNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 P+ ++L + + GF +G + DL +GS G+ +++I + Sbjct: 32 PDLLVLATVSYAFLRGSVWGSFVGFSLGIMQDLSAGSFFGLNAFTLTLIGLVFGRFSDRV 91 Query: 96 RNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIF 149 + + +L ++ +L+ + +++ IF Sbjct: 92 FKEQFFLPITASVAATLAKYLMSALIVYLLGYHFNPLLHMGRVLFILLIFQLIF 145 >UniRef50_C0GEW2 Rod shape-determining protein MreD n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEW2_9FIRM Length = 171 Score = 39.4 bits (91), Expect = 0.041, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 1/124 (0%) Query: 8 GRWVIWLSFLIALLLQIMPWP-DNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 G+ +I+ F+I+L LQ P+ +L+I++ L + G G + Sbjct: 2 GQVIIFALFVISLTLQGSVLSLAGPDGVHPDILLVIVVALSLLSDSKRGALVGLAAGLLQ 61 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 D++ G+ LG ++ L L + L+V+ S+ D + F+ + L Sbjct: 62 DILFGAPLGFFAFTKTLTGALAGLFADEIYKDFVLAPMLLVITFSVFNDGLTFFLQRLFA 121 Query: 127 NVSF 130 Sbjct: 122 IPQP 125 >UniRef50_B9CK75 Rod shape-determining protein MreD n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CK75_9ACTN Length = 186 Score = 39.4 bits (91), Expect = 0.045, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 50/125 (40%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 +++L+ + +L + L+ N+ + + L++ R GF+ G DL S Sbjct: 13 IVFLAIVCLVLQLALAPNIALLQGHANFACIFAMLIALSIGGRTGTICGFIAGIFYDLSS 72 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 S +G+ L +++++Y++ + + + + + V + ++ + Sbjct: 73 TSPIGLMALLLTVMSYILGREVRNRLSGNFGSSVGKIAISVTAVSVAQQVFSSILGQTTN 132 Query: 131 RPEVF 135 E Sbjct: 133 LMEAL 137 >UniRef50_Q2JDQ1 Rod shape-determining protein n=3 Tax=Frankia RepID=Q2JDQ1_FRASC Length = 180 Score = 39.4 bits (91), Expect = 0.045, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%) Query: 37 NWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 + +L++L L + GFV G + DL S LG L + +I Y V L Sbjct: 45 DLMLVLLAAIALIEGPLLGAVAGFVAGLLADLSSSHVLGQTALVLCLIGYAVGL 98 >UniRef50_C1XP36 Rod shape-determining protein MreD n=2 Tax=Meiothermus RepID=C1XP36_9DEIN Length = 159 Score = 39.0 bits (90), Expect = 0.048, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 3/136 (2%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + ++ +FL+ L+ + P + P+ L L + + F +G + Sbjct: 1 MRPILLLAFTFLLQSLISGL-LPGWVSP--PDLPFLATLAIAARVSPYAGLVIAFAVGLL 57 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL + G+ V+ + Y+ + F Q V+ L + + + Sbjct: 58 MDLSAAGYPGLNVVGYLLGTYVFYRLSRAFHWDEPLGQFAVLAGSLLTKWLGYLLMVYWL 117 Query: 126 INVSFRPEVFWSSVVN 141 F V+ Sbjct: 118 RGEPFGFLSITPVFVS 133 >UniRef50_C7HFS8 Rod shape-determining protein MreD n=3 Tax=Clostridium thermocellum RepID=C7HFS8_CLOTM Length = 176 Score = 39.0 bits (90), Expect = 0.050, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 47/108 (43%) Query: 13 WLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGS 72 L F+IAL+ + ++ +PN +L+ ++ L + TGF+ G D++SG Sbjct: 15 ALIFIIALIQSTVLESISIFNIKPNLLLIFIISVALLGSNIEGAVTGFLCGLTQDMLSGR 74 Query: 73 TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G L + +AL + + + S++ + V++ Sbjct: 75 VIGFYALLGLYLGLGIALINKRLYKENVLVAIFTTFVSSIIYEFAVYF 122 >UniRef50_B1BCX2 Rod shape-determining protein MreD n=4 Tax=Clostridium RepID=B1BCX2_CLOBO Length = 163 Score = 39.0 bits (90), Expect = 0.050, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 54/134 (40%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 V + L +L + + P+ V + ++++ + + + G G + D+ Sbjct: 7 VALILILFTILDNSLMPFLAIRHIYPSLVFIFVVFYSIINGNASAIYVGVFSGLLQDVYL 66 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 + +GV + +I L A + + LS++ I++F +LV S+ Sbjct: 67 MNGIGVNMFINMVICLLAAQIGKTIFKDKSVIPIITCFGLSILKGILMFIILYLVGQRSY 126 Query: 131 RPEVFWSSVVNGVL 144 V + S+ N ++ Sbjct: 127 FNTVLYVSLYNMII 140 >UniRef50_A7VRP8 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRP8_9CLOT Length = 172 Score = 39.0 bits (90), Expect = 0.051, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 50/134 (37%), Gaps = 5/134 (3%) Query: 16 FLIALLLQIMP-WPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTL 74 ++ +LQ +P +L+ RP ++ + + ++ +G G G ++D+ GS + Sbjct: 17 IILLFILQELPYLMPSLLGVRPLLLIAAPMTIAILENEKIGLGFGVFAGLLMDMGYGSVI 76 Query: 75 GVRVLAMSIIAYLVALKYQLFRNLALWQ----QALVVMLLSLVVDIIVFWAEFLVINVSF 130 G + + ++ + + L + A V + + + + + Sbjct: 77 GFHAIVLGVLGFFIGLLAVNLVKTNVLTSLLCTAAAVFAVISLHFVFFYLLRGYDMASYA 136 Query: 131 RPEVFWSSVVNGVL 144 + + ++ L Sbjct: 137 YQKYYLPMMLYSFL 150 >UniRef50_Q0AN30 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0AN30_MARMM Length = 173 Score = 39.0 bits (90), Expect = 0.058, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 2/137 (1%) Query: 13 WLSFLIALLLQIMPW-PDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 S L+AL++Q P + + P W L+ + W P + F +G DL++G Sbjct: 18 IASVLVALIVQASPTRLVDGLTIMPTWTLMAIFLWSGVRPQFMPPIAVFAIGLTQDLLTG 77 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + +GV L+ + + + + L L L+ I F A + Sbjct: 78 APMGVWALSYLVAISVFRFRGEDGMPRDLPPVLLRFGATLLLAHAIAFAAGSFALEQLAD 137 Query: 132 PEVF-WSSVVNGVLWPW 147 + V + +++P Sbjct: 138 FQPLAIEVVASILMFPL 154 >UniRef50_A1AS30 Rod shape-determining protein MreD, putative n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AS30_PELPD Length = 164 Score = 38.6 bits (89), Expect = 0.063, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 50/130 (38%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 + + + +L + + +F+P+ +L+I++ L + + + +++G Sbjct: 2 NHRGALILFFSTLTAIVLQSSLLPLYLVEMFKPDLLLIIMVVLALRVSYGTGMPLAWLLG 61 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 + D+ SG LG+ + II L+ + + V +LV ++ Sbjct: 62 MVKDVFSGLYLGLNGFSFLIIFLLIKSVADRLYTESGLLFVMTVSGATLVCMLVNLLLLV 121 Query: 124 LVINVSFRPE 133 ++ + Sbjct: 122 MLTDSPNLLY 131 >UniRef50_D1VM57 Rod shape-determining protein MreD n=1 Tax=Frankia sp. EuI1c RepID=D1VM57_9ACTO Length = 182 Score = 38.6 bits (89), Expect = 0.077, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 9/92 (9%) Query: 5 RSQGRWVIWLSFLIALLLQI-----MPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTG 59 + L+A++ Q+ +P P P+ VL++L L L G Sbjct: 16 HPPTFAAVTFVLLVAVIAQVSVIARLPLPGGG----PDLVLMLLATAALVLGPVNGAVLG 71 Query: 60 FVMGAILDLISGSTLGVRVLAMSIIAYLVALK 91 FV G DL+S LG L ++ YLV L Sbjct: 72 FVTGLFGDLLSTHVLGQTTLVFLLVGYLVGLV 103 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A7C6B4 Rod shape-determining protein MreD n=1 Tax=Beggi... 119 3e-26 UniRef50_C4L8L5 Rod shape-determining protein MreD n=1 Tax=Tolum... 116 3e-25 UniRef50_C7R9G4 Rod shape-determining protein MreD n=1 Tax=Kangi... 114 1e-24 UniRef50_Q2BKP8 Rod shape-determining protein MreD n=2 Tax=Gamma... 113 2e-24 UniRef50_A6VWN4 Rod shape-determining protein MreD n=2 Tax=Marin... 112 3e-24 UniRef50_C6MDC7 Rod shape-determining protein MreD n=1 Tax=Nitro... 112 3e-24 UniRef50_Q2YC95 Rod shape-determining protein MreD n=1 Tax=Nitro... 112 4e-24 UniRef50_A0KFA9 Rod shape-determining protein MreD n=3 Tax=Gamma... 112 4e-24 UniRef50_Q0AFP8 Rod shape-determining protein MreD n=2 Tax=Nitro... 111 7e-24 UniRef50_Q15ZH1 Rod shape-determining protein MreD n=4 Tax=Alter... 111 8e-24 UniRef50_Q47VG6 Rod shape-determining protein MreD n=4 Tax=Alter... 111 1e-23 UniRef50_C5SBR5 Rod shape-determining protein MreD n=1 Tax=Alloc... 111 1e-23 UniRef50_P0ABH6 Rod shape-determining protein mreD n=132 Tax=Ent... 109 3e-23 UniRef50_Q7NPY3 Rod shape-determining protein MreD n=2 Tax=Chrom... 109 3e-23 UniRef50_C4K6Y8 Rod shape-determining protein n=1 Tax=Candidatus... 109 4e-23 UniRef50_C6P2H4 Rod shape-determining protein MreD n=1 Tax=Sider... 109 4e-23 UniRef50_C5BSY4 Rod shape-determining protein MreD n=1 Tax=Tered... 107 1e-22 UniRef50_B2SMY7 Rod shape-determining protein MreD n=20 Tax=Xant... 107 2e-22 UniRef50_Q60CK4 Rod shape-determining protein MreD n=1 Tax=Methy... 107 2e-22 UniRef50_B7V018 Rod shape-determining protein MreD n=21 Tax=Pseu... 106 2e-22 UniRef50_A4BLX4 Rod shape-determining protein MreD n=1 Tax=Nitro... 106 3e-22 UniRef50_Q5QWE3 Rod shape-determining protein n=2 Tax=Idiomarina... 105 5e-22 UniRef50_B8GL91 Rod shape-determining protein MreD n=2 Tax=Thioa... 105 6e-22 UniRef50_Q0KFF4 Rod shape-determining protein MreD n=12 Tax=Burk... 105 6e-22 UniRef50_C0N753 Rod shape-determining protein MreD n=1 Tax=Methy... 104 9e-22 UniRef50_Q07WQ1 Rod shape-determining protein MreD n=21 Tax=Shew... 103 2e-21 UniRef50_A1WVS1 Rod shape-determining protein MreD n=2 Tax=Ectot... 103 2e-21 UniRef50_C7RML3 Rod shape-determining protein MreD n=3 Tax=Betap... 103 2e-21 UniRef50_A4A5B4 Rod shape-determining protein MreD n=1 Tax=Congr... 102 3e-21 UniRef50_B5JU59 Rod shape-determining protein MreD n=1 Tax=gamma... 102 3e-21 UniRef50_A9I0I9 Rod shape-determining protein MreD n=5 Tax=Borde... 102 5e-21 UniRef50_A0Z7H0 Rod shape-determining protein n=1 Tax=marine gam... 101 6e-21 UniRef50_C4GIM3 Putative uncharacterized protein n=1 Tax=Kingell... 101 7e-21 UniRef50_A9N8Z0 Rod shape-determining protein MreD n=7 Tax=Coxie... 101 9e-21 UniRef50_Q1QVB9 Rod shape-determining protein MreD n=1 Tax=Chrom... 101 9e-21 UniRef50_B7RTI7 Rod shape-determining protein MreD n=2 Tax=uncla... 101 1e-20 UniRef50_B3PC04 Putative rod shape-determining protein MreD n=1 ... 100 1e-20 UniRef50_A4BGL4 Rod shape-determining protein MreD n=1 Tax=Reine... 100 2e-20 UniRef50_C5V1V9 Rod shape-determining protein MreD n=1 Tax=Galli... 100 2e-20 UniRef50_C0DXR0 Putative uncharacterized protein n=1 Tax=Eikenel... 100 3e-20 UniRef50_C1D5N3 MreD n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 100 3e-20 UniRef50_Q21FT2 Rod shape-determining protein MreD n=1 Tax=Sacch... 99 5e-20 UniRef50_A1U482 Rod shape-determining protein MreD n=3 Tax=Marin... 98 7e-20 UniRef50_Q1GYC9 Rod shape-determining protein MreD n=3 Tax=Methy... 98 9e-20 UniRef50_B8KR95 Rod shape-determining protein MreD n=1 Tax=gamma... 98 1e-19 UniRef50_Q21RI3 Rod shape-determining protein MreD n=66 Tax=Burk... 98 1e-19 UniRef50_Q0VS68 Rod shape-determining protein MreD n=2 Tax=Alcan... 97 2e-19 UniRef50_C7I0H6 Rod shape-determining protein MreD n=4 Tax=Burkh... 96 3e-19 UniRef50_B5F9L8 Rod shape-determining protein MreD n=89 Tax=Gamm... 95 7e-19 UniRef50_A1K1T9 Rod shape-determining protein n=4 Tax=Rhodocycla... 95 7e-19 UniRef50_Q1ZG63 Hypothetical rod shape-determining protein MreD ... 95 1e-18 UniRef50_Q1MYL6 Rod shape-determining protein MreD n=1 Tax=Berma... 92 8e-18 UniRef50_Q7VRC2 Rod shape-determining protein MreD n=2 Tax=Candi... 91 1e-17 UniRef50_A8PNB8 Rod shape-determining protein MreD n=1 Tax=Ricke... 87 2e-16 UniRef50_A4T0H0 Rod shape-determining protein MreD n=2 Tax=Polyn... 86 5e-16 UniRef50_C5TMH6 Rod shape-determining protein MreD n=5 Tax=Neiss... 85 8e-16 UniRef50_UPI00016994A6 Rod shape-determining protein MreD n=1 Ta... 84 2e-15 UniRef50_D0L063 Rod shape-determining protein MreD n=1 Tax=Halot... 83 5e-15 UniRef50_A1STZ6 Rod shape-determining protein MreD n=1 Tax=Psych... 82 6e-15 UniRef50_Q2SBH0 Cell shape-determining protein n=1 Tax=Hahella c... 82 6e-15 UniRef50_B0VS17 Rod shape-determining protein n=17 Tax=Acinetoba... 81 1e-14 UniRef50_Q3SM35 Putative uncharacterized protein n=1 Tax=Thiobac... 81 1e-14 UniRef50_Q8D1V7 MreD protein n=1 Tax=Wigglesworthia glossinidia ... 80 2e-14 UniRef50_Q1YU27 Rod shape-determining protein MreD n=1 Tax=gamma... 79 4e-14 UniRef50_P44476 Rod shape-determining protein mreD n=32 Tax=Past... 78 7e-14 UniRef50_B5EMQ8 Rod shape-determining protein MreD n=3 Tax=Acidi... 78 1e-13 UniRef50_A0L7I2 Rod shape-determining protein MreD n=1 Tax=Magne... 76 5e-13 UniRef50_A4J7K3 Putative uncharacterized protein n=1 Tax=Desulfo... 75 6e-13 UniRef50_C9L5U1 Rod shape-determining protein MreD n=1 Tax=Blaut... 75 6e-13 UniRef50_B0SG26 Cell shape-determining protein n=6 Tax=Leptospir... 74 2e-12 UniRef50_Q31F49 Rod shape-determining protein MreD n=1 Tax=Thiom... 74 2e-12 UniRef50_A5IGA1 Rod shape determining protein MreD n=5 Tax=Legio... 74 2e-12 UniRef50_A5WCI6 Putative uncharacterized protein n=1 Tax=Psychro... 73 2e-12 UniRef50_Q1LU39 Rod shape-determining protein MreD n=1 Tax=Bauma... 73 4e-12 UniRef50_Q1IRN5 Putative uncharacterized protein n=1 Tax=Candida... 72 6e-12 UniRef50_C8PVZ5 Rod shape-determining protein MreD n=1 Tax=Enhyd... 72 7e-12 UniRef50_C7GE98 Rod shape-determining protein MreD n=12 Tax=Clos... 72 8e-12 UniRef50_D1AAV7 Rod shape-determining protein MreD n=1 Tax=Therm... 72 8e-12 UniRef50_C0EWW6 Putative uncharacterized protein n=1 Tax=Eubacte... 71 1e-11 UniRef50_C1F7C9 Rod shape-determining protein MreD n=1 Tax=Acido... 71 1e-11 UniRef50_B7ANR5 Putative uncharacterized protein n=1 Tax=Bactero... 71 1e-11 UniRef50_Q1QDJ0 Rod shape-determining protein MreD n=2 Tax=Psych... 71 1e-11 UniRef50_Q0AWG6 Putative uncharacterized protein n=1 Tax=Syntrop... 70 2e-11 UniRef50_A5D430 Cell shape-determining protein n=1 Tax=Pelotomac... 70 2e-11 UniRef50_A1HP02 Rod shape-determining protein MreD n=1 Tax=Therm... 69 4e-11 UniRef50_D2BCD8 Putative uncharacterized protein n=1 Tax=Strepto... 69 6e-11 UniRef50_C5RGQ5 Rod shape-determining protein MreD n=1 Tax=Clost... 68 9e-11 UniRef50_B1I4Q2 Putative uncharacterized protein n=1 Tax=Candida... 68 1e-10 UniRef50_B4V3T9 Rod shape-determining protein n=18 Tax=Streptomy... 67 2e-10 UniRef50_Q73N05 Rod shape-determining protein MreD n=1 Tax=Trepo... 67 2e-10 UniRef50_A5CW44 Rod shape-determining protein MreD n=3 Tax=Gamma... 67 2e-10 UniRef50_C8W5R8 Rod shape-determining protein MreD n=1 Tax=Desul... 66 3e-10 UniRef50_C9KMZ2 Rod shape-determining protein MreD n=1 Tax=Mitsu... 66 4e-10 UniRef50_B8FVF2 Rod shape-determining protein MreD n=2 Tax=Desul... 66 4e-10 UniRef50_C8PRS7 Rod shape-determining protein MreD n=1 Tax=Trepo... 66 6e-10 UniRef50_C9R8K4 Rod shape-determining protein MreD n=1 Tax=Ammon... 65 8e-10 UniRef50_B2S393 Rod shape-determining protein n=2 Tax=Treponema ... 65 1e-09 UniRef50_A8MHM1 Putative uncharacterized protein n=1 Tax=Alkalip... 64 2e-09 UniRef50_Q01ZY2 Putative uncharacterized protein n=1 Tax=Candida... 63 3e-09 UniRef50_A6TQI1 Putative uncharacterized protein n=1 Tax=Alkalip... 63 3e-09 UniRef50_Q9RH81 Rod shape determining protein MreD (Fragment) n=... 59 5e-08 UniRef50_C1QD51 Rod shape-determining protein MreD n=2 Tax=Brach... 55 9e-07 Sequences not found previously or not previously below threshold: UniRef50_A5ZRS3 Putative uncharacterized protein n=1 Tax=Ruminoc... 64 1e-09 UniRef50_C0CHV5 Putative uncharacterized protein n=2 Tax=Clostri... 64 2e-09 UniRef50_C4Z086 Putative uncharacterized protein n=1 Tax=Eubacte... 63 4e-09 UniRef50_A5Z699 Putative uncharacterized protein n=1 Tax=Eubacte... 60 2e-08 UniRef50_B0M9U3 Putative uncharacterized protein n=2 Tax=Clostri... 60 3e-08 UniRef50_C4FYQ2 Putative uncharacterized protein n=1 Tax=Abiotro... 58 1e-07 UniRef50_C6LCB6 Rod shape-determining protein MreD n=1 Tax=Bryan... 58 1e-07 UniRef50_UPI0001BC32A8 hypothetical protein BcroD2_07178 n=1 Tax... 57 2e-07 UniRef50_C0D9Y3 Putative uncharacterized protein n=3 Tax=Clostri... 56 4e-07 UniRef50_UPI00016C006C hypothetical protein Epulo_06690 n=1 Tax=... 56 5e-07 UniRef50_Q3AF77 Rod shape-determining protein MreD n=1 Tax=Carbo... 56 5e-07 UniRef50_A7VBA9 Putative uncharacterized protein n=2 Tax=Clostri... 56 6e-07 UniRef50_C4GB48 Putative uncharacterized protein n=1 Tax=Shuttle... 53 3e-06 UniRef50_UPI0001BCE78D hypothetical protein SnoxA4_08100 n=1 Tax... 53 4e-06 UniRef50_C9LXR8 Rod shape-determining protein MreD n=1 Tax=Selen... 53 4e-06 UniRef50_Q2RL20 Putative uncharacterized protein n=1 Tax=Moorell... 53 5e-06 UniRef50_B0TBY4 Rod shape-determining protein, putative n=1 Tax=... 52 8e-06 UniRef50_B8I6C4 Rod shape-determining protein MreD n=2 Tax=Clost... 51 9e-06 UniRef50_C7HFS8 Rod shape-determining protein MreD n=3 Tax=Clost... 51 1e-05 UniRef50_C7LYA8 Rod shape-determining protein MreD n=1 Tax=Acidi... 51 1e-05 UniRef50_Q1JVG6 Rod shape-determining protein MreD, putative n=1... 51 1e-05 UniRef50_D1C5P2 Rod shape-determining protein MreD n=1 Tax=Sphae... 51 1e-05 UniRef50_A8RTL3 Putative uncharacterized protein n=3 Tax=Clostri... 51 1e-05 UniRef50_C4V388 Rod shape-determining protein MreD n=1 Tax=Selen... 51 1e-05 UniRef50_B1BCX2 Rod shape-determining protein MreD n=4 Tax=Clost... 51 2e-05 UniRef50_C5RUB4 Rod shape-determining protein MreD n=9 Tax=Therm... 51 2e-05 UniRef50_UPI0001C31D92 rod shape-determining protein MreD n=1 Ta... 49 4e-05 UniRef50_Q97JM9 Predicted membrane protein n=1 Tax=Clostridium a... 49 4e-05 UniRef50_Q1PZX3 Similar to rod shape-determining protein n=1 Tax... 49 4e-05 UniRef50_C6P9K0 Rod shape-determining protein MreD n=1 Tax=Therm... 49 4e-05 UniRef50_C8WXL3 Rod shape-determining protein MreD n=2 Tax=Alicy... 49 5e-05 UniRef50_B9M5R2 Rod shape-determining protein MreD n=6 Tax=Geoba... 48 8e-05 UniRef50_C8WAG3 Rod shape-determining protein MreD n=1 Tax=Atopo... 48 1e-04 UniRef50_C0GEW2 Rod shape-determining protein MreD n=1 Tax=Dethi... 48 1e-04 UniRef50_B1GZB4 Rod shape-determining protein MreD n=1 Tax=uncul... 48 2e-04 UniRef50_D1BNE8 Rod shape-determining protein MreD n=3 Tax=Veill... 47 2e-04 UniRef50_Q0SR40 Rod shape-determining protein MreD n=9 Tax=Clost... 47 2e-04 UniRef50_C8WGI8 Rod shape-determining protein MreD n=1 Tax=Egger... 46 4e-04 UniRef50_A0LSW3 Rod shape-determining protein MreD n=1 Tax=Acido... 46 4e-04 UniRef50_B9CK75 Rod shape-determining protein MreD n=1 Tax=Atopo... 46 5e-04 UniRef50_UPI0001C15A7A conserved hypothetical protein n=2 Tax=No... 46 5e-04 UniRef50_Q2JDQ1 Rod shape-determining protein n=3 Tax=Frankia Re... 46 5e-04 UniRef50_Q2JIW7 Rod shape-determining protein MreD n=2 Tax=Synec... 46 6e-04 UniRef50_C7Q8C4 Rod shape-determining protein MreD n=1 Tax=Caten... 46 6e-04 UniRef50_A9KL02 Putative uncharacterized protein n=1 Tax=Clostri... 46 6e-04 UniRef50_B3E5W6 Rod shape-determining protein MreD n=1 Tax=Geoba... 45 0.001 UniRef50_A5I680 Rod shape determining protein n=14 Tax=Clostridi... 45 0.001 UniRef50_B8CY02 Putative uncharacterized protein n=1 Tax=Halothe... 44 0.001 UniRef50_B7GIQ3 Cell shape-determining protein n=1 Tax=Anoxybaci... 44 0.001 UniRef50_D2PTR4 Rod shape-determining protein MreD n=1 Tax=Kribb... 44 0.002 UniRef50_O33621 MreD protein n=3 Tax=Streptomyces RepID=O33621_S... 44 0.002 UniRef50_B0AA33 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.002 UniRef50_Q18B09 Putative membrane protein n=4 Tax=Clostridium di... 44 0.002 UniRef50_UPI0000E87A9D hypothetical protein MB2181_01455 n=1 Tax... 43 0.003 UniRef50_B3T1Z2 Putative rod shape-determining protein MreD n=1 ... 43 0.003 UniRef50_D1VM57 Rod shape-determining protein MreD n=1 Tax=Frank... 43 0.003 UniRef50_A8TM61 Putative uncharacterized protein n=1 Tax=alpha p... 43 0.004 UniRef50_A1AS30 Rod shape-determining protein MreD, putative n=1... 43 0.004 UniRef50_C2HJU1 Cell-shape determining protein n=2 Tax=Finegoldi... 43 0.004 UniRef50_C1XP36 Rod shape-determining protein MreD n=2 Tax=Meiot... 43 0.004 UniRef50_Q67SI4 Rod shape-determining protein n=1 Tax=Symbiobact... 43 0.005 UniRef50_B6ITQ9 Putative uncharacterized protein n=1 Tax=Rhodosp... 43 0.005 UniRef50_A7VRP8 Putative uncharacterized protein n=1 Tax=Clostri... 43 0.005 UniRef50_A8SMQ0 Putative uncharacterized protein n=1 Tax=Parvimo... 43 0.005 UniRef50_A4U0U0 Cell shape-determining protein n=3 Tax=Magnetosp... 43 0.005 UniRef50_B7K607 Rod shape-determining protein MreD n=3 Tax=Cyano... 42 0.009 UniRef50_B6GBQ7 Putative uncharacterized protein n=2 Tax=Collins... 42 0.009 UniRef50_A1SMC8 Rod shape-determining protein n=1 Tax=Nocardioid... 41 0.012 UniRef50_A7NJU4 Putative uncharacterized protein n=2 Tax=Roseifl... 41 0.013 UniRef50_C1A3X6 Hypothetical membrane protein n=1 Tax=Gemmatimon... 41 0.013 UniRef50_C9LL35 Rod shape-determining protein MreD n=1 Tax=Diali... 41 0.018 UniRef50_A8YBX0 Similar to tr|Q3MD54|Q3MD54_ANAVT Hypothetical p... 41 0.018 UniRef50_A3JW84 Sensor protein n=2 Tax=Rhodobacterales bacterium... 41 0.018 UniRef50_D0WFR0 Rod shape-determining protein MreD n=1 Tax=Slack... 41 0.019 UniRef50_A0ZBN2 Putative uncharacterized protein n=1 Tax=Nodular... 41 0.020 UniRef50_B2KEI3 Putative uncharacterized protein n=1 Tax=Elusimi... 41 0.021 UniRef50_C7N6A7 Rod shape-determining protein MreD n=1 Tax=Slack... 40 0.021 UniRef50_B0C8J4 Putative uncharacterized protein n=1 Tax=Acaryoc... 40 0.025 UniRef50_B8G7R9 Rod shape-determining protein MreD n=3 Tax=Chlor... 39 0.040 UniRef50_D2RM78 Rod shape-determining protein MreD n=1 Tax=Acida... 39 0.044 UniRef50_Q2G6F4 Putative uncharacterized protein n=1 Tax=Novosph... 39 0.045 UniRef50_Q2RX68 Putative uncharacterized protein n=1 Tax=Rhodosp... 39 0.049 UniRef50_A4IRD6 Cell-shape determining protein MreD n=9 Tax=Geob... 39 0.053 UniRef50_B9L228 Putative uncharacterized protein n=1 Tax=Thermom... 39 0.055 UniRef50_Q0AN30 Putative uncharacterized protein n=1 Tax=Maricau... 39 0.064 UniRef50_A7HW07 Rod shape-determining protein MreD n=1 Tax=Parvi... 39 0.064 UniRef50_B8HRB3 Rod shape-determining protein MreD n=12 Tax=Cyan... 39 0.067 UniRef50_B0PGC1 Putative uncharacterized protein n=1 Tax=Anaerot... 39 0.067 UniRef50_A1B9A6 Putative rod shape-determining protein MreD n=1 ... 39 0.070 UniRef50_D0MDV5 Rod shape-determining protein MreD n=1 Tax=Rhodo... 39 0.079 UniRef50_A4EEW2 Putative rod shape-determining protein MreD n=1 ... 38 0.080 UniRef50_Q5WER3 Rod shape-determining protein MreD n=3 Tax=Bacil... 38 0.084 UniRef50_Q74BG1 Rod shape-determining protein MreD, putative n=1... 38 0.087 UniRef50_A3WCG2 Putative uncharacterized protein n=1 Tax=Erythro... 38 0.099 >UniRef50_A7C6B4 Rod shape-determining protein MreD n=1 Tax=Beggiatoa sp. PS RepID=A7C6B4_9GAMM Length = 163 Score = 119 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 93/162 (57%), Gaps = 1/162 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M+S R G WVI LSF+++ +L I+P P +++RP+WV L+L+YW +A+P RV V TG+ Sbjct: 1 MSSERHHGGWVIILSFIVSFMLAIIPLPAWAVLWRPDWVALVLIYWCIAVPQRVGVATGW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G I D++ + LG L++ I Y+ ++ R LWQQA+ V L + I Sbjct: 61 FVGVIYDVLKDTLLGQNALSLCFIGYVSVKWHRQVRLFPLWQQAIGVFGLLSISHWIEAL 120 Query: 121 A-EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + ++ ++ +LWPW+F+++R +R+ + V Sbjct: 121 IYKNMLGYSLLTGSFISQVFISMILWPWVFVILRDMRRTYRV 162 >UniRef50_C4L8L5 Rod shape-determining protein MreD n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8L5_TOLAT Length = 163 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 60/156 (38%), Positives = 110/156 (70%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 G+ I+L+ ++A++L ++P P + +FRP+WV L++LYW++ALPH +NV + +++G I+ Sbjct: 8 HGKGSIYLTLIVAIILTMVPLPVAIDMFRPDWVALVVLYWVIALPHHLNVVSAWIVGLIM 67 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 D++ GSTLG+ L+M++I+ +VA +YQ RN ++WQQALV+ L V +++FW E L Sbjct: 68 DILLGSTLGIHALSMAVISCVVAAQYQKIRNFSVWQQALVMGSLIFVGQLLIFWVEHLFA 127 Query: 127 NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + W+S+ + +LWP ++L +R +R++F ++ Sbjct: 128 SPRLNTRFVWASLSSTLLWPSVYLFLRYIRRRFNIR 163 >UniRef50_C7R9G4 Rod shape-determining protein MreD n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R9G4_KANKD Length = 165 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 97/161 (60%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + G WVI LS +I ++L I P P+ FRP++ LI YW++ALPHR+ + F Sbjct: 4 MKNEVKHGTWVIILSLIIGMILDIFPLPETWQPFRPSFTFLIFSYWVIALPHRIGLLWAF 63 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 + G LD + G+TLG+ +++++ +++ L +Q R LW+QAL ++ LS++ IV W Sbjct: 64 ITGLALDALLGTTLGLHCFSLAVLTFILQLNHQRLRLFPLWKQALTLIFLSVIYFAIVLW 123 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 L + +++ NG+LWPW+F+L+R +R+ F V Sbjct: 124 LARLTGKPESDSWYWIATLTNGLLWPWLFVLLRDIRRYFHV 164 >UniRef50_Q2BKP8 Rod shape-determining protein MreD n=2 Tax=Gammaproteobacteria RepID=Q2BKP8_9GAMM Length = 166 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 59/155 (38%), Positives = 96/155 (61%) Query: 8 GRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILD 67 G ++I +FLI L+L +P P + RP WV +IL+YW++ALPHRV +G F +G +LD Sbjct: 12 GGFIILGTFLIGLMLSQIPLPYFIEWARPEWVAMILIYWVMALPHRVGMGMAFFLGLLLD 71 Query: 68 LISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVIN 127 +I GS LG+ L+++ IA+L L +Q R L QQA++VM+L + ++ W + Sbjct: 72 VIKGSVLGLNALSLTTIAFLTLLLHQRLRMFPLIQQAMMVMVLVGINQLLFHWMQAFTGF 131 Query: 128 VSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 +V+G+LWPW+F+++R VR+ F ++ Sbjct: 132 TGDSLIFLLPCLVSGILWPWLFVILRGVRRFFRIR 166 >UniRef50_A6VWN4 Rod shape-determining protein MreD n=2 Tax=Marinomonas RepID=A6VWN4_MARMS Length = 157 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 57/157 (36%), Positives = 96/157 (61%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +V ++ L AL+L+ MP+P+ L+ FRP W LL++LYW++ALP RV VG + +G + Sbjct: 1 MKPIFVFCITLLTALMLEAMPFPEELVWFRPEWALLVILYWVIALPFRVGVGLAWFLGLM 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL+ G +G L IIAY A+ Y+ R WQQ + LL + ++ FW + + Sbjct: 61 VDLLQGGIIGQHSLTYVIIAYTCAVFYKRLRMYHRWQQGFFICLLVSINQLLDFWIDHYL 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + +F +V+ G+LWPW F+++R VR+ +A++ Sbjct: 121 GHAEPTLMIFMPAVITGLLWPWSFIILRSVRRIYAIR 157 >UniRef50_C6MDC7 Rod shape-determining protein MreD n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MDC7_9PROT Length = 191 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 74/152 (48%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 Y G W I S +I L+L +P +L++ RP++V L + YW + P+++ + F MG Sbjct: 30 YVPAGNWFIATSLIIGLILNFLPLQGDLLISRPDFVALAITYWNVNHPYKLGMSMAFGMG 89 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 ++D+ + LG LA S+I YL + + R +L +QA + L++ I++ Sbjct: 90 LMVDVGNAGILGQHALAYSVIFYLTLIFGRRLRLFSLLKQAPQIGFFLLIMQIVIILIAL 149 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKV 155 + F ++V +LW LM + Sbjct: 150 SNGSALPGWGYFLATVTGTLLWAPASFLMTLL 181 >UniRef50_Q2YC95 Rod shape-determining protein MreD n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YC95_NITMU Length = 173 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 78/155 (50%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 W I LS ++ALLL ++P +P++V L++LYW L P RV +G F MG + Sbjct: 14 PAKSWFIMLSLIVALLLNLIPVTGTARTLQPDFVALVMLYWYLNEPQRVGIGMAFWMGLL 73 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL + ST G L S++A++ + + ++QA + L+ L I+ A Sbjct: 74 MDLSNASTFGQHALGYSVMAFMALVFNRRMGIFEGYKQAPQIGLVLLSGQIVTLLAGLFA 133 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 + F S+V +LWP + ++R ++ ++ Sbjct: 134 GSPFPGWNFFLGSIVGMLLWPLLSAILRVPQKPWS 168 >UniRef50_A0KFA9 Rod shape-determining protein MreD n=3 Tax=Gammaproteobacteria RepID=A0KFA9_AERHH Length = 161 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 79/159 (49%), Positives = 112/159 (70%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 + GR IW+S L+AL L I+P P L FRP+W+ ++L+YW LALPHR NVGT +V G Sbjct: 3 QPASGRIWIWISILLALSLSILPLPFQLEPFRPDWLAMVLIYWALALPHRTNVGTAWVAG 62 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 +LD++ GSTLGVR +AM+I YL A ++Q RN +LWQQAL++ LSLV + +FWAE Sbjct: 63 LLLDVLLGSTLGVRAMAMAITTYLAAFQFQKIRNFSLWQQALIIGCLSLVGKVTIFWAEH 122 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 L S FWS++ ++WPW+FL++RKVR++F ++ Sbjct: 123 LFSRASLNFAYFWSTLSTMLIWPWVFLVLRKVRRRFNIK 161 >UniRef50_Q0AFP8 Rod shape-determining protein MreD n=2 Tax=Nitrosomonas RepID=Q0AFP8_NITEC Length = 183 Score = 111 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 77/153 (50%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +I++S + A+L+ +MP+ ++V RP++V L LLYW + P + + F+ G Sbjct: 24 PARKSLIYISLITAVLINLMPFDKVILVLRPDFVALTLLYWNIYQPQQAGMSIAFISGLF 83 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+I S +G +A +I + + Y+ R +QQ V+ + L +VF L Sbjct: 84 MDVIDVSIMGQHAIAYCLITFFALILYRRLRLFNAFQQIPAVLWILLSGQGVVFLTGILA 143 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + +F +SV + WP + L+ R+Q Sbjct: 144 GSYIPEWYIFLASVTGALCWPLLVFLLGIFRKQ 176 >UniRef50_Q15ZH1 Rod shape-determining protein MreD n=4 Tax=Alteromonadales RepID=Q15ZH1_PSEA6 Length = 158 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 67/152 (44%), Positives = 105/152 (69%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 I LS ++AL+LQIMP P + +RP+WV L+L YW LALP RVNVG F++G +LD++ Sbjct: 7 TIGLSIIVALVLQIMPMPAIVEQYRPDWVFLVLGYWALALPERVNVGVAFIVGLVLDILL 66 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 G+++GV AMS+ +++A YQ RN ++WQQA+V+ +L + +++VFW L+ ++ F Sbjct: 67 GTSIGVHSFAMSLSVFVLAANYQRLRNYSVWQQAVVIGILCALYNLVVFWLMHLLTDIYF 126 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 W + + V+WPWIF L+R+VR+QF + Sbjct: 127 MLTYMWPVITSMVIWPWIFWLLRRVRRQFRLS 158 >UniRef50_Q47VG6 Rod shape-determining protein MreD n=4 Tax=Alteromonadales RepID=Q47VG6_COLP3 Length = 159 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 68/157 (43%), Positives = 109/157 (69%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 S ++I+L+ LIAL+ I P P ++ FRP+WVL++L+YW LALP+++N+ T +VMG I Sbjct: 3 SNNGFIIFLTLLIALMASITPMPLSVDAFRPDWVLIVLVYWCLALPNKINIFTAWVMGFI 62 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LD++ GS LGV AM++ Y+V + +Q RN ++WQQAL++ +LS ++VFW + + Sbjct: 63 LDVLLGSVLGVHACAMALSVYIVVVNFQKIRNFSVWQQALIIGVLSAQYHLVVFWLQRFL 122 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 +V F P + + VLWPW+FLL+R+VR+ F ++ Sbjct: 123 SDVVFLPNYLYPVITTIVLWPWVFLLLRRVRRHFRIE 159 >UniRef50_C5SBR5 Rod shape-determining protein MreD n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SBR5_CHRVI Length = 172 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 49/160 (30%), Positives = 79/160 (49%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + Q W I LS +A+ L I+P D +RP W +L +L+W A P RV + TGFV Sbjct: 12 SYKPRQPFWPIALSLTLAMYLTILPLSDWPWDYRPPWTVLAILFWCFATPRRVGIFTGFV 71 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G +LD+++G+ LG L++S+ AYL + R WQQA V L+ L ++ W Sbjct: 72 VGLMLDVLTGALLGQHALSLSVTAYLALVLRPRIRIFPPWQQAFFVALILLTERLLTLWI 131 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + S++V WP + L+ ++ + Sbjct: 132 IGATGQPMPALTYWISALVGLAFWPIMAWLLVPFERRLGL 171 >UniRef50_P0ABH6 Rod shape-determining protein mreD n=132 Tax=Enterobacteriaceae RepID=MRED_ECO57 Length = 162 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 162/162 (100%), Positives = 162/162 (100%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF Sbjct: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW Sbjct: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ Sbjct: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 >UniRef50_Q7NPY3 Rod shape-determining protein MreD n=2 Tax=Chromobacterium group RepID=Q7NPY3_CHRVO Length = 167 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 80/154 (51%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + R I +F+IA+L++++P P + P+++ L++LYW++ P RVN+G F+MG Sbjct: 11 KPVKRRFILTTFVIAVLIELVPLPHGSTRWLPDFIGLLILYWVINQPRRVNIGIAFLMGI 70 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 I D+ + G LA S+ A+L + + L QQALVV+ L L +I+ L Sbjct: 71 IADVSTAGLFGQHALAYSVTAFLALSRQRQLVMFNLGQQALVVLGLMLTNQLIMVVVRML 130 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + F ++ +LWP + LM +Q Sbjct: 131 TGSAFVGWSYFLPPLIGALLWPLLTKLMLIPYRQ 164 >UniRef50_C4K6Y8 Rod shape-determining protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K6Y8_HAMD5 Length = 162 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 97/162 (59%), Positives = 136/162 (83%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M+ Y+S+GRWVI+LSFLI ++LQIMPWP + +F+P+W+LLI +YW++ALPHRVN+GTGF Sbjct: 1 MSYYKSRGRWVIYLSFLIGIILQIMPWPQQIDMFQPSWLLLIFIYWVMALPHRVNLGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G I DL+ GSTLG+ L MS+IAYLV +K+Q FRN+ALWQQ L V+LLS+++ I VF Sbjct: 61 ILGLITDLLLGSTLGIHSLGMSMIAYLVTIKFQTFRNMALWQQTLFVILLSIIMTITVFL 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 EFL+I+VSF +F ++++NG++WPW+FLLMRK R++F VQ Sbjct: 121 TEFLIIHVSFNTGIFSNALINGIVWPWLFLLMRKTRRKFLVQ 162 >UniRef50_C6P2H4 Rod shape-determining protein MreD n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2H4_9PROT Length = 172 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 1/152 (0%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 I S +A++L +PW + RP++V L+LLYW PHRV +G +V+G Sbjct: 14 PASTSFIIFSLFVAVMLNWLPWHGWALALRPDFVALVLLYWCTHKPHRVGIGIAWVVGIF 73 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ S G LA +++A+ + ++ + L QQA+ V + L+ Sbjct: 74 SDVADASLFGQHALAYTVLAFGGIVLHRRVQMFDLRQQAMHVFPMLLLSYAAYAAV-HWQ 132 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + E F S V+ +LW + LL++ +R+ Sbjct: 133 VRGYVAWEYFLGSGVSALLWIPMTLLLQALRR 164 >UniRef50_C5BSY4 Rod shape-determining protein MreD n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BSY4_TERTT Length = 163 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 79/161 (49%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + + LS L+ ++P + RP + L++++W++ P ++ + GF+ Sbjct: 3 TPKQRNYALFLGLSIAFGLVFAVLPLTQDFSYLRPELLCLLVIFWVMNSPEQLGMTFGFL 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G + D++ G +A++IIAY+ + YQ R+ ++W Q+L V +L V ++V W Sbjct: 63 VGLLQDVVELGVWGGHAMALTIIAYICLMSYQRIRSYSVWHQSLWVFILVGVHQVVVNWV 122 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + + + +++ + WP + ++R + Q Sbjct: 123 QGIAGYRTPAHYLVLPTLMTALCWPLVVFFFLRIRHLYRTQ 163 >UniRef50_B2SMY7 Rod shape-determining protein MreD n=20 Tax=Xanthomonadaceae RepID=B2SMY7_XANOP Length = 161 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 79/152 (51%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R + W++ S IAL+L ++P P + RP W+ L+L YW++ P RV +G FV G Sbjct: 3 RMRNTWILPASIFIALVLGLLPLPTVVQPLRPYWLALVLAYWVIEEPDRVGLGLAFVAGV 62 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + DL+ G LG + L + I+ +++ R + QQAL + L L I+ Sbjct: 63 LADLLYGGLLGEQALRLVIMTFILQRFRARMRFFPMSQQALAIGGLLLNDRIVSSAVHLA 122 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVR 156 V + +W+ ++ VLWP +F+++ VR Sbjct: 123 VGEPTLPWSYWWAPLLGIVLWPPLFVVLDAVR 154 >UniRef50_Q60CK4 Rod shape-determining protein MreD n=1 Tax=Methylococcus capsulatus RepID=Q60CK4_METCA Length = 163 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 92/159 (57%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + R+ R +I+ S A+ ++I+P P + ++ P+W+LL+L+YW + P RV VGT ++ Sbjct: 3 RTRRTPSRILIFASLAAAMAMRIVPLPQDWALWNPDWILLVLIYWAVMAPDRVGVGTAWL 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 G + D ++G LG LA S++ Y+ ++ FR ++ QQ L V+LL + ++ W Sbjct: 63 TGLLADALTGRLLGQDALAYSVVIYVGVRFHRRFRVYSMVQQVLAVVLLLGLGLLLTLWT 122 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 + S +++++ G++WPW+ + + +R+++ Sbjct: 123 RHIRGLASAPEGYWFAALSGGLVWPWVRVALDGLRRRYG 161 >UniRef50_B7V018 Rod shape-determining protein MreD n=21 Tax=Pseudomonadaceae RepID=B7V018_PSEA8 Length = 164 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 90/161 (55%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 A+ S WVIWLS L+ L+L + P P + RP W+ ++L YW+L LP RV + T ++ Sbjct: 4 ATQGSNNVWVIWLSLLVGLVLAVAPMPTFTEIGRPLWLAMLLTYWVLLLPERVGMVTAWL 63 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G D++ G+ LG L + +I +LV +Q R WQQ LV++++ + ++ W Sbjct: 64 LGLAQDVLYGNLLGQNALILGLITFLVLSLHQRLRMFPAWQQCLVLVVVYGLAQLLQLWL 123 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 L N ++V+ +LWPW++ L++ VR + V+ Sbjct: 124 NALTGNRPPTLTFLLPALVSALLWPWVYALLQFVRLRLNVR 164 >UniRef50_A4BLX4 Rod shape-determining protein MreD n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLX4_9GAMM Length = 134 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 74/133 (55%) Query: 30 NLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVA 89 RP W LIL+YW +ALP RV V + +G + D++ G LG LA S+ A+L Sbjct: 2 WAKPLRPEWTALILIYWCMALPQRVGVTVAWTVGLLQDVLQGFLLGAHALAFSVAAFLTL 61 Query: 90 LKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIF 149 ++ R LWQQAL +LL LV+ +I+ W L+ + + + ++ LWP +F Sbjct: 62 KLHRQIRVFPLWQQALSTLLLLLVIRLILLWTRGLIGHPGVDWQYWLPALTGAALWPPLF 121 Query: 150 LLMRKVRQQFAVQ 162 L +R VR++F V+ Sbjct: 122 LGLRAVRRRFQVR 134 >UniRef50_Q5QWE3 Rod shape-determining protein n=2 Tax=Idiomarina RepID=Q5QWE3_IDILO Length = 161 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 66/156 (42%), Positives = 96/156 (61%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 G + ++++IAL L +MP P FRP+W L++LYWI+ALPHRVN+GT V+G + Sbjct: 5 KPGFITLLITYIIALTLMVMPMPAAFDTFRPDWPTLVMLYWIIALPHRVNMGTALVLGVL 64 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++ GS +GV L M ++ Y A +Q RN AL QQALV+ +L + +VF A + Sbjct: 65 SDILLGSIVGVHALGMVVVTYFAARHFQRIRNFALIQQALVIAVLIFIKRFVVFEANVFL 124 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + F FW + + V W W+F L+RKVR+QF V Sbjct: 125 HDAEFTFSYFWPVLTSAVFWLWVFPLLRKVRRQFGV 160 >UniRef50_B8GL91 Rod shape-determining protein MreD n=2 Tax=Thioalkalivibrio RepID=B8GL91_THISH Length = 163 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 57/159 (35%), Positives = 90/159 (56%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 S W I L+F++AL L ++P PD +RP W+ + L+YW +ALP R+ VG G+ + Sbjct: 2 SNPRGWVWAIPLTFIVALALTVVPLPDWAAPWRPQWLAMTLIYWSMALPRRIGVGLGWFL 61 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G +LD +G+ LG L ++IAYL +Q R LWQQAL V L + ++V W Sbjct: 62 GLLLDAATGALLGQHALGFALIAYLSIRMHQRVRVFPLWQQALTVGGLLALHLLLVLWIL 121 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + V + +LWPW+F+L+R VR+++ + Sbjct: 122 GMTGRAPGTWLYWAPLVSSMILWPWLFVLLRDVRRRWCL 160 >UniRef50_Q0KFF4 Rod shape-determining protein MreD n=12 Tax=Burkholderiales RepID=Q0KFF4_RALEH Length = 170 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 2/154 (1%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R I SF++A L +MPW L + P+ V L+L++W + P +V +G F++G Sbjct: 9 RPVNPAFIAFSFVLAFLFNLMPWGTTL--WVPDMVALVLVFWNIHQPRKVGMGVAFLLGL 66 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 ++D+ LG LA +++AY ++ ++ QAL V+ L VV + Sbjct: 67 LMDVHDARLLGEHALAYTLLAYFAITIHRRVLWFTVYTQALHVLPLLFVVHAVPVLIRLA 126 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + ++ + + +LWP L+ +++ Sbjct: 127 MGAPLPGWQLLLAPAIEALLWPLATSLLLAPQRR 160 >UniRef50_C0N753 Rod shape-determining protein MreD n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N753_9GAMM Length = 159 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 92/161 (57%), Gaps = 4/161 (2%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + S+ VI L+ ++A+LL ++P P+ FRP WV+L L+YW +ALPHRV++G G++ Sbjct: 3 TTAESRNGVVIILTLIVAMLLMLVPLPETARYFRPEWVVLTLVYWAMALPHRVSIGVGWL 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G ++D+ G TLG+ + + YL+A + R LWQQAL ++ + ++V Sbjct: 63 VGLLMDVTMGGTLGIMAFSYAFAVYLIARFHLQLRQYPLWQQALTILSVV----VVVHLV 118 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + ++ + + +LWP +F +RK+R+ F V Sbjct: 119 SVVTSKSESTWLIWMPVLTSTLLWPVMFATLRKIRRTFQVS 159 >UniRef50_Q07WQ1 Rod shape-determining protein MreD n=21 Tax=Shewanella RepID=Q07WQ1_SHEFN Length = 163 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 108/163 (66%), Gaps = 1/163 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M+++ + GR V+WL+ I ++ QIMP P + +RP+W+L++++YW +ALPHR ++ T + Sbjct: 1 MSAHIANGRLVVWLTLFIGMMFQIMPLPKMVEAWRPDWLLMVMMYWAMALPHRYSILTAW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G +LD++ G+ LG+R LA+S++ Y+V L Q RN WQQ+L+V + ++FW Sbjct: 61 LLGVMLDVLLGAHLGIRSLALSLVIYIVVLLCQQLRNYPRWQQSLLVACFICIYHAVIFW 120 Query: 121 AEF-LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 +F +V F ++F ++ + +W W+F ++R +R+ + V+ Sbjct: 121 VQFVVVGAAPFNVDMFLPAISSLFIWWWVFWVLRNMRRHYKVR 163 >UniRef50_A1WVS1 Rod shape-determining protein MreD n=2 Tax=Ectothiorhodospiraceae RepID=A1WVS1_HALHL Length = 163 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 1/163 (0%) Query: 1 MASYRSQ-GRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTG 59 M +R + G +I LSF+IAL+L I+P P FRP W LILLYW LALP RV VG G Sbjct: 1 MTGHRPRNGGGIILLSFIIALMLTIVPMPGWAQEFRPEWTALILLYWGLALPERVGVGVG 60 Query: 60 FVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVF 119 +++G D + G+ LG LA ++IA+L +Q R + +WQQA+VV+ L +V ++VF Sbjct: 61 WLVGLFQDALLGTLLGQHALAFALIAFLALRLHQHLRLVPVWQQAVVVLGLLVVAQLVVF 120 Query: 120 WAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 W ++ + + + + +V +WP +F +MR VR++F VQ Sbjct: 121 WINGIIGRPAPEWQAWAAILVGAAIWPLVFHIMRGVRRRFQVQ 163 >UniRef50_C7RML3 Rod shape-determining protein MreD n=3 Tax=Betaproteobacteria RepID=C7RML3_9PROT Length = 173 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 2/153 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 W I + LIALL +P + V P+WV L L++W + P RV +G F+ G Sbjct: 13 PVRPWFIASTLLIALLFNFLPTANWPGV--PDWVALALVFWCVREPRRVGMGLAFLFGLA 70 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ S LG LA ++AY + + L QQAL V L L+V ++ +V Sbjct: 71 MDVADASLLGQHALAYVLVAYGASSLSRRILWFPLGQQALQVFPLLLLVQLVQLGVRTIV 130 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 F + +LWP + ++ + Q Sbjct: 131 GADFPGLAYFVGPCLAALLWPLLTFVLLLPQHQ 163 >UniRef50_A4A5B4 Rod shape-determining protein MreD n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5B4_9GAMM Length = 161 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 91/160 (56%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 S R WVI S L A +L ++P L+ +RP W+LL+L+YW +ALPHRV + T V+ Sbjct: 2 SERMNAYWVILASLLFAAVLAVIPLTRALLWWRPEWILLVLVYWTIALPHRVGLVTALVV 61 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G +D++ G+ +G +L++S++ L L YQ R L QQ+ V+ LL+ + +I W + Sbjct: 62 GLFVDVMEGAVIGQNMLSLSVVVTLAGLMYQRLRVFTLVQQSSVIFLLAGLHQLITQWLQ 121 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 L + ++ +LWP + L+R++R+ + V Sbjct: 122 GLQGGAVPGFGFLFPALSTALLWPLLMPLLRELRRSYKVH 161 >UniRef50_B5JU59 Rod shape-determining protein MreD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JU59_9GAMM Length = 155 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 ++ + ++A++ ++P P+ FRP+ V L+L+YW LA P ++ + TGF MG +LD++ Sbjct: 4 LVTTTLVLAVIFTLVPLPETAAWFRPDIVALVLMYWWLAHPEKIGIYTGFFMGLLLDVMQ 63 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA-EFLVINVS 129 GS LGV + IIA++ YQ R L L QQAL+V + L+ I FW + S Sbjct: 64 GSLLGVHGCGLVIIAWIFLKNYQRIRVLPLVQQALIVFFVLLIKYFIGFWVDNHRIQGFS 123 Query: 130 FRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 F + +LWPW+F+ +R +R++ Sbjct: 124 GTLLYFAPCLTGAILWPWLFVTLRDLRRR 152 >UniRef50_A9I0I9 Rod shape-determining protein MreD n=5 Tax=Bordetella RepID=A9I0I9_BORPD Length = 187 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 66/153 (43%), Gaps = 2/153 (1%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R +W + L+A LL ++PW P+ + L+L +W + P RV + F G Sbjct: 27 RPAHGAFVWGTLLLAWLLSLLPWRVWEGA--PDILALVLAFWCVHEPRRVGLVAAFCFGV 84 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 ++D+ S LG L+ ++ AY ++ + LW QA+ ++ + + ++ Sbjct: 85 LMDVHDASVLGGHALSYTLTAYGAVALHRRLQRFDLWSQAMHMLPVFFLARLVQQMVLAW 144 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + + ++ +WP ++ ++ Sbjct: 145 LAGKWPGWDWTLGVLLTVAIWPLAGWVLHLPQR 177 >UniRef50_A0Z7H0 Rod shape-determining protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7H0_9GAMM Length = 160 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 50/156 (32%), Positives = 79/156 (50%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 +G WVI S LIALLL +P P + + P+W LL L YW+LALP+RV V + V+G + Sbjct: 5 RGSWVIVGSILIALLLVAIPVPVSWREYTPDWPLLFLFYWVLALPNRVGVLSACVVGILT 64 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 DL+ GS G + + ++ + YQ R +Q LV+ LL +V ++ E + Sbjct: 65 DLLDGSPAGATAIGAVMAVLVILVSYQRIRQFDGLKQGLVMALLISLVHLVEQRLETFLG 124 Query: 127 NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + V+ + W + +R R+ + VQ Sbjct: 125 WQHSSTAFLMPAAVSFLFWVPVRNCLRFFRRYYEVQ 160 >UniRef50_C4GIM3 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIM3_9NEIS Length = 167 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 83/159 (52%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 Y + +I++SFL+A+L+ +P +L + P + L+L+YWI+ P V++GT F++G Sbjct: 8 YSKIQKRLIYISFLLAILIDFIPLSGSLFHWLPEFTALMLMYWIINRPQNVDIGTAFILG 67 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 ++D+ + ++LG LA I AY+V + QA+V+ L ++I+ + Sbjct: 68 LLMDIGTNASLGGHALAYVIAAYIVIQNRRQIVLYHYGVQAVVIFAALLCSEMILTVVRW 127 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + VF S VV +LWP + +M + + Sbjct: 128 RYTHHFYGWTVFLSPVVGALLWPLLNKIMVSLLNFLNSR 166 >UniRef50_A9N8Z0 Rod shape-determining protein MreD n=7 Tax=Coxiella burnetii RepID=A9N8Z0_COXBR Length = 162 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 90/161 (55%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M ++ I L+ ++A++L I+P P + ++P W+ ++LL+W++ALP+RV +G F Sbjct: 1 MEGNYAKDVLAIGLTLIMAMMLTILPLPAWAVWYQPAWIFMVLLFWMIALPYRVGIGAAF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 + G + DL+SG+ LG L +IIAY + R+L WQQ ++V + + V + +W Sbjct: 61 IWGLLFDLLSGTILGQHALIFTIIAYFIIRFQTPLRSLPNWQQMILVFIATAVYLALQYW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + + + +LWPW+ +L++ + +F + Sbjct: 121 IMAMADASPETAKYWLPLMSTTLLWPWVRVLLKDYQSRFRL 161 >UniRef50_Q1QVB9 Rod shape-determining protein MreD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QVB9_CHRSD Length = 159 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 60/157 (38%), Positives = 95/157 (60%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R G IWL+ +I+L LQ+MP PD +++RPNW+ L L YW + P RV V GFV G Sbjct: 2 RLPGLIAIWLTLVISLCLQVMPLPDAWLMWRPNWLGLALAYWCVTAPQRVGVFHGFVCGL 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 +LDLI G+ LG L +S++ YL L YQ R ++WQQA+++ +L ++ ++ W + Sbjct: 62 LLDLIEGTPLGQNALTLSLLTYLCLLLYQRLRAYSIWQQAVMLFVLLGLIQLVEQWLRTI 121 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 VS +++ G LWPW+F +M+ +R++ + Sbjct: 122 FGPVSIHLAFLLPALIGGALWPWLFTMMQVLRRRLGI 158 >UniRef50_B7RTI7 Rod shape-determining protein MreD n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RTI7_9GAMM Length = 162 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 90/162 (55%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M W++ SF AL+L ++P+P L RP WVLL+L+YW++ALP RV + T Sbjct: 1 MVDQGPNAYWLVLASFFCALILAVLPFPHWLAWGRPEWVLLVLVYWVIALPQRVGLITAL 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G +LD++ G+ +G A+ ++ L L YQ R +L QQA +V +L+ + +I W Sbjct: 61 LLGLMLDVVEGAVIGQNAFALVVVTLLALLLYQRLRVFSLAQQAAIVFVLAGLNQMICQW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + L S + + +LWP++ L+R +R+ + V Sbjct: 121 VQNLEGAGSTTLMFLLPAFSSALLWPFVLHLLRGLRRLYGVS 162 >UniRef50_B3PC04 Putative rod shape-determining protein MreD n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC04_CELJU Length = 161 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 68/140 (48%) Query: 23 QIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMS 82 + P P +RP +VL++ +YW+L +P V++ V+G DL+ G L + Sbjct: 22 SVYPLPFIWQWWRPEFVLVVAIYWMLNMPQSVSLVFLCVLGLFQDLLESVPFGQHSLGLI 81 Query: 83 IIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNG 142 I+AY+ L YQ RN W+QA V +L + + W + + + +V + Sbjct: 82 IVAYICFLSYQRVRNFPRWKQAGWVFVLVGIAQLTDNWVQSMAGRQLSGVAFLYPAVTSA 141 Query: 143 VLWPWIFLLMRKVRQQFAVQ 162 + WP+ + + ++ Q++ + Sbjct: 142 IFWPFCCVWLDRLCQRYQLH 161 >UniRef50_A4BGL4 Rod shape-determining protein MreD n=1 Tax=Reinekea blandensis MED297 RepID=A4BGL4_9GAMM Length = 161 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 89/162 (54%), Gaps = 1/162 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M G W+I ++F + L +P + RP+WV +++++W+L LP R + F Sbjct: 1 MKQKPPHGLWLIIITFFVGFFLAAIPM-GRFEIARPDWVGMLIIFWVLVLPERFGIFVSF 59 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G + D ++G+TLG+ S +AY V L + R L QQA+VV L+ V I+ W Sbjct: 60 GVGILFDTLAGTTLGLYAFVYSGLAYTVLLLHARLRMYPLGQQAMVVFLILGVTHIVAQW 119 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + +++V W ++ + V+WPW++ L+R ++ +F VQ Sbjct: 120 LKVWLMSVVSGELHIWPALTSAVVWPWVYGLLRTLQIKFRVQ 161 >UniRef50_C5V1V9 Rod shape-determining protein MreD n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1V9_9PROT Length = 170 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 1/153 (0%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R I S + ALLL +PW + P++V ++LLYW P R+ VG + +G Sbjct: 13 RPVSTMFIVTSIVTALLLNGLPWGGLWLTLHPDFVAVVLLYWCTHKPLRIGVGLSWAIGI 72 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + D+ S G LA +++A+ + + R L +Q V+++ + ++ Sbjct: 73 LADVGDASLFGQHALAYTLLAFGGVVLSRRIRMFDLREQTTQVLVILFSTYAVYALVQWQ 132 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 V F + + +LW + L + +RQ Sbjct: 133 VNGQIV-WTYFLGCLTSTLLWVPMSSLFQSMRQ 164 >UniRef50_C0DXR0 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXR0_EIKCO Length = 167 Score = 99.9 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 73/159 (45%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 S + + SFL+ LL+ +P P++ L++L YW+L P + +G F +G Sbjct: 8 KESTPKRWVAFSFLLVLLIDFIPVAPPWAYPLPDFTLIMLAYWLLHRPQLIGIGVAFCLG 67 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 ++D+ S S LG LA S+ A+L+ + + QA+ V LV ++VF Sbjct: 68 LLVDIGSNSLLGQHGLAYSVAAFLIERNRRQIVLNSFGWQAVAVAGAMLVSQLVVFLVSL 127 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 ++ S+V G+LWP + +M + + Sbjct: 128 FQQQPFPLWRLWLPSIVTGLLWPQLNNVMLAIAHYRRPR 166 >UniRef50_C1D5N3 MreD n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5N3_LARHH Length = 168 Score = 99.9 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 1/153 (0%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R + I LS +AL+++++P P++V L++LYW + P R +G F++G Sbjct: 9 RPVRKRWIALSLALALVVELLPLSGPAR-LTPDFVALLVLYWNINQPSRFGIGLSFLVGL 67 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 I D S +G LA ++I+YLV L+ + +L QQAL+V+ L L+ I++ A Sbjct: 68 IGDFFSAGLIGQHALAYTVISYLVLLRQRQIAMYSLGQQALIVLGLLLLSQAIMWLARMA 127 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + V F S V +LWP + ++ ++ Sbjct: 128 LGGVVVGWSYFMSPFVGALLWPLLTTILLWPQR 160 >UniRef50_Q21FT2 Rod shape-determining protein MreD n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FT2_SACD2 Length = 162 Score = 99.1 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 68/149 (45%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + +S AL+L I P P RP L+++YW++ P V T + Sbjct: 1 MPNLGLSFYIFFCVSAFFALVLSIYPIPHAYAALRPELFCLLVVYWVINYPQYFGVTTAW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +MG LD++ + G L ++ +AY+ YQ R+ +LWQQ L V + + +IV W Sbjct: 61 LMGLFLDVVHSTVWGAHALGLAAVAYICLSSYQRIRSYSLWQQTLWVFVFVGIHQVIVNW 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIF 149 L + ++ V+ + WP + Sbjct: 121 MLGLSGYHKPTHIILVTTAVSALSWPVMV 149 >UniRef50_A1U482 Rod shape-determining protein MreD n=3 Tax=Marinobacter RepID=A1U482_MARAV Length = 158 Score = 98.4 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 80/150 (53%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 + ++ +++L+L I +P + FRP W+ LI+ YW P + + + +G +LD++ Sbjct: 9 LFAITVVLSLVLSISLFPVDWFQFRPEWLGLIVFYWTFRAPAQFGILMAWCLGLLLDILE 68 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 + LGV + M++IA+LV +Q R L QQ L+V LL + ++V + + L+ S Sbjct: 69 STPLGVNAMGMALIAFLVLTIHQRLRMYPLPQQCLMVFLLLGINQMLVHFVKQLLGAESA 128 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 W ++ + + WP + ++ + ++ Sbjct: 129 GFSYLWPALTSALAWPVVSGVLDTINRKLG 158 >UniRef50_Q1GYC9 Rod shape-determining protein MreD n=3 Tax=Methylophilaceae RepID=Q1GYC9_METFK Length = 159 Score = 98.0 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 47/139 (33%), Positives = 72/139 (51%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 ++LS L+ALL+QI+PW +L+ RP ++LL +LYW L PH N+GT + G ++DL SG Sbjct: 9 VYLSLLVALLMQILPWSGSLLTIRPEFLLLTVLYWTLRAPHLCNIGTAWFAGLMMDLASG 68 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 G LA S ++ + +WQQA V LL L+ +I + Sbjct: 69 GLFGQFALAYSAASFFAVSYQRRLALFNIWQQAGYVFLLLLLSQVITLVLKLFSGGELPG 128 Query: 132 PEVFWSSVVNGVLWPWIFL 150 + F SV +LW ++ Sbjct: 129 WQYFLPSVSGILLWQFVTF 147 >UniRef50_B8KR95 Rod shape-determining protein MreD n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR95_9GAMM Length = 160 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 82/158 (51%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 R+Q WVI ++ ++ALLL P P FRP LL+L YW+LALP RV + + V+G Sbjct: 2 ERAQAVWVIPVTLMVALLLHAAPLPFEWRWFRPELPLLVLFYWVLALPQRVGLLSAAVIG 61 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 +DL+ GS LG L + + ++ YQ R L+QQ L++ LL + + W Sbjct: 62 IGIDLLEGSALGGLALGLVVSTLVLLFTYQRIRQFNLFQQCLLMGLLIALALTVENWVHK 121 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + + W ++V+ W I +R +R+ + V Sbjct: 122 FMALPTGGMQFLWPALVSMPFWAVIRKPLRGLRRYYGV 159 >UniRef50_Q21RI3 Rod shape-determining protein MreD n=66 Tax=Burkholderiales RepID=Q21RI3_RHOFD Length = 176 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 71/155 (45%), Gaps = 2/155 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNL--IVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 + IW S + ALLL ++ + P+ + L+L++W + P R+ +G FV G Sbjct: 12 PANPFFIWGSLVAALLLNMLQNMGLWGRAAWMPDLLALVLVFWSIHQPQRIGIGAAFVFG 71 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 +D+ G+ LG L+ +++++L ++ + QA V+ L + I Sbjct: 72 IFVDVHQGAMLGQHALSYTVLSFLAIAIHRRLLWFPVPSQAFQVLPLFVAAHAIALSVRM 131 Query: 124 LVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 L + + ++ +LWP + +L+ +++ Sbjct: 132 LAGGGFPGFWLLLAPLIESLLWPVVSVLLLMPQRR 166 >UniRef50_Q0VS68 Rod shape-determining protein MreD n=2 Tax=Alcanivorax RepID=Q0VS68_ALCBS Length = 163 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 1/163 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M S R G VI ++ L+A LL+++P P ++ RP W+LL+L+YW+L LPHR+ V GF Sbjct: 1 MVSDRPAGTGVIIVTLLLAALLEVIPLPASIDWIRPEWMLLVLVYWVLVLPHRIGVLWGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G D++ G+TLG LA ++ A+++ Y+ R QQ V+ LL V ++ F Sbjct: 61 FVGLYHDVLVGTTLGQWGLATALGAFVMLAAYKRMRVFNGLQQCAVIFLLVGTVSLLAFL 120 Query: 121 AEFLVINV-SFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + V + +SSV + ++W + ++R ++ +F V+ Sbjct: 121 VQESVGRTLYPPYTILYSSVSSALVWRPVCAVLRWIQLRFLVR 163 >UniRef50_C7I0H6 Rod shape-determining protein MreD n=4 Tax=Burkholderiales RepID=C7I0H6_THIIN Length = 178 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 2/153 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 W I LS L+ALL+ +P + P+ V L L++W + P RV + FV+G Sbjct: 18 PVNPWFIALSLLMALLIDFLPLGRLA--WMPDMVALTLVFWNVHQPRRVGMAVAFVLGLA 75 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ GS LG L ++++Y ++ A QQAL V+ L + +++ Sbjct: 76 VDVQQGSVLGQHALIYTVLSYFAITLHRRLLWFAPLQQALHVLPLFVATQVLLLLVGMWA 135 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + V LWP + L+ +++ Sbjct: 136 GGSFPGWAFLLAPFVQAALWPLLSWLLLAPQRR 168 >UniRef50_B5F9L8 Rod shape-determining protein MreD n=89 Tax=Gammaproteobacteria RepID=B5F9L8_VIBFM Length = 163 Score = 95.3 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 85/161 (52%), Positives = 120/161 (74%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 +S+ +GR +IWLSFLIAL LQ PWP L V RP+W++L+ YW+LALPHRVNVGT V Sbjct: 3 SSHLMRGRVIIWLSFLIALTLQAAPWPGALEVLRPSWIILVTFYWVLALPHRVNVGTAMV 62 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G + DL+ G+TLG+R + M+I+ YLVA +++ RNLALWQQA + L+L+ I+ F Sbjct: 63 LGILWDLLLGTTLGIRGMTMAILVYLVAANFKVLRNLALWQQAAIFSGLTLLGKILEFMG 122 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 EFLV +VSF W+ V+N +LWPW+FLLMR+VR+ ++++ Sbjct: 123 EFLVHDVSFNAHFLWAGVLNFLLWPWLFLLMRRVRRHWSIR 163 >UniRef50_A1K1T9 Rod shape-determining protein n=4 Tax=Rhodocyclaceae RepID=A1K1T9_AZOSB Length = 173 Score = 95.3 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 2/151 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 I+ S ++AL L +P V P+WV L+L +W + P R+ +G GF+ G + Sbjct: 13 PVRLGFIYFSLMVALALAYVPTGRFPGV--PDWVALVLAFWCIREPLRIGMGAGFLFGVL 70 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ G+ +G LA ++AYL + QAL V+ + L +++ + Sbjct: 71 VDIGQGAAMGQHALAYVVLAYLATGLARRVMWFPPLLQALHVLPMLLASQMLMVAVRLIA 130 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVR 156 F SS LW + L+ + Sbjct: 131 GAEFPGWAYFLSSFTAVALWVPLNYLLLLPQ 161 >UniRef50_Q1ZG63 Hypothetical rod shape-determining protein MreD n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZG63_9GAMM Length = 157 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 91/156 (58%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +I+++F +ALL I P P L FRP+W++LI+ YW+LA P R+ + F +G I Sbjct: 1 MRHYSIIYITFFVALLCAIFPLPIFLNAFRPDWMILIIFYWVLATPQRIGIVHAFFIGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LD++ GS LG+ L S++AY V + +Q R L Q L++ + +L + + ++W Sbjct: 61 LDILLGSMLGMHALLFSLLAYFVCVDFQRIRYFTLVQTTLLIGIAALCIKLSLYWIASTQ 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 ++ FWS + ++WPW FL +R VR +F V Sbjct: 121 QDILLHKSYFWSIFSSMLIWPWFFLFLRMVRIRFKV 156 >UniRef50_Q1MYL6 Rod shape-determining protein MreD n=1 Tax=Bermanella marisrubri RepID=Q1MYL6_9GAMM Length = 155 Score = 91.8 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 1/155 (0%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 VI +F +A +L ++P+P + RP WV + L++W + P R + GF MG + Sbjct: 1 MNAYAVILPTFFLAFVLSVLPFPRLIDFIRPEWVAMTLIFWCVLSPGRAGIFLGFFMGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++ G LG LA+S++ YL AL R QQ+ +V ++ + ++ FW E L+ Sbjct: 61 FDVLHGQLLGQSALALSVLGYLCALMQSRMRIYNPLQQSFMVFVMVGLYLLMSFWIESLM 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 + W SV + ++WP + L+ +RQ F Sbjct: 121 GVDRKT-ALLWPSVGSALIWPLWYNLLFAIRQFFR 154 >UniRef50_Q7VRC2 Rod shape-determining protein MreD n=2 Tax=Candidatus Blochmannia RepID=Q7VRC2_BLOFL Length = 162 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 107/161 (66%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M ++ I+ SF +A++LQ + + +P+W +++L+YWI+ +P+++N+GTGF Sbjct: 1 MYNFYIYKICNIYCSFAVAIILQYVLFFSITWYLQPSWTMMLLIYWIVLIPNKINIGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 +G ILD IS STLG++ L+MSII+YL K LFR+ +WQQ++ ++L S + I F Sbjct: 61 FLGLILDCISCSTLGIQTLSMSIISYLTIRKIYLFRHTYVWQQSIFIVLFSFINQNIKFL 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 +FL+ +VS+ P++F++ +++G++WP + L+ K+ + Sbjct: 121 IQFLMFSVSYSPKIFYNCILDGIMWPVLIFLIHKINNSSKI 161 >UniRef50_A8PNB8 Rod shape-determining protein MreD n=1 Tax=Rickettsiella grylli RepID=A8PNB8_9COXI Length = 161 Score = 87.2 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 81/153 (52%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + +SF A+LL I+P P +F P W+ L+L+YWI+ LP ++ + Sbjct: 1 MRPLYFSTLCFMVISFSGAILLNILPLPPMFALFFPLWLPLVLIYWIMVLPGHIHFTLAW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G +D++ GS LG LA+ ++AYL + FR + QQ L V ++ ++ I+ Sbjct: 61 LLGLFIDVLYGSYLGEHSLALCVVAYLAYRFHLQFRMFPVPQQMLFVFVMLIIYQTILIV 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMR 153 + + V V+ S +++ ++WP I L+R Sbjct: 121 TQAWLGFVIDFRWVWISLLMSALIWPLITYLLR 153 >UniRef50_A4T0H0 Rod shape-determining protein MreD n=2 Tax=Polynucleobacter necessarius RepID=A4T0H0_POLSQ Length = 174 Score = 85.6 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 76/156 (48%), Gaps = 4/156 (2%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R I+ S ALLL ++P + + P+W+++ +++W + V+V T F++G Sbjct: 11 RPVNPVFIYFSLFCALLLNLLPIGN--YGWVPDWLIICMVFWNIHQHRYVSVITAFILGL 68 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 ++D+ + LG+ + S++AY+ ++ L + QA+ ++ + L+V + + Sbjct: 69 MMDVHNSDLLGLHAFSYSLVAYVAISWHRRIVALTVLSQAVHLLPVFLLVALFPVLVHWA 128 Query: 125 VINVSFRPEVF--WSSVVNGVLWPWIFLLMRKVRQQ 158 + + + + + +LWP ++ +++ Sbjct: 129 LSGELYWWALTGAVQAFIEAMLWPLATRILLAPQRR 164 >UniRef50_C5TMH6 Rod shape-determining protein MreD n=5 Tax=Neisseria RepID=C5TMH6_NEIFL Length = 181 Score = 84.9 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 74/160 (46%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 SYR+ ++ S ++ ++L MP+ + + P L+LLYW L P R +G F + Sbjct: 22 SYRAVPLHIMAASLIVMMILDFMPFSFDGFFWLPEMTALMLLYWTLHQPQRAGMGLAFAI 81 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G I+D + +TLG+ L+ ++ Y + + + Q V+ L+ ++ A Sbjct: 82 GLIVDAATAATLGLHALSYVVMTYFILNRRRQIMLYGHIMQLAAVLAALLLNQAVLTVAR 141 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + + F + V +LWP + LM V + + + Sbjct: 142 LFLNHQVITLQGFVAPFVGALLWPILSQLMLIVTRIYRSR 181 >UniRef50_UPI00016994A6 Rod shape-determining protein MreD n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016994A6 Length = 106 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 42/98 (42%), Positives = 61/98 (62%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + ++ L+ +L +MP PD FRP WV LIL+YW +ALP RVNVGTG+ Sbjct: 1 MNANVQGRLYIAHLTLAFGFVLAVMPMPDWASNFRPQWVTLILIYWCMALPERVNVGTGW 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNL 98 + G +LD++SGS LG LA++++++L YQ R L Sbjct: 61 LAGLLLDVLSGSMLGQHALALAVVSFLTLNIYQRVRVL 98 >UniRef50_D0L063 Rod shape-determining protein MreD n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L063_HALNC Length = 155 Score = 82.6 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 73/154 (47%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 +I LS L+AL+L + P + P W+LL +LYW + P+ V + ++ G + Sbjct: 2 RNKWAMIPLSLLVALILTVEPSVPLYQHYSPQWLLLTVLYWCIREPNSVGLIVAWMSGLV 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LD+ S LG L ++ A +V Q+ QQAL V LS + ++ W + + Sbjct: 62 LDVASVGLLGANALLFTLSAAVVLGLRQMLFFTGPVQQALFVAGLSAIYLLLSLWMQGGI 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 +++ N V WP I ++ +R+++ Sbjct: 122 SDLTMLLHNLVRVASNLVAWPIILMVFHLLRRRY 155 >UniRef50_A1STZ6 Rod shape-determining protein MreD n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STZ6_PSYIN Length = 133 Score = 82.2 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 83/131 (63%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 L FRP+W++LI+ YW+LALPHRV++ F++G + DL+ GSTLG+ L S +AY+V Sbjct: 2 LNAFRPDWMILIIFYWVLALPHRVSIVHAFILGVVFDLLLGSTLGMHALLFSFLAYIVIT 61 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFL 150 YQLFR L Q L+V L SL+ + ++ + ++ FWS + ++WPW FL Sbjct: 62 NYQLFRYFTLVQTTLLVGLYSLLSKLALYLMASSLQDIILHQSYFWSVFTSMLVWPWFFL 121 Query: 151 LMRKVRQQFAV 161 +R +R++F V Sbjct: 122 FLRFIRRRFKV 132 >UniRef50_Q2SBH0 Cell shape-determining protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SBH0_HAHCH Length = 157 Score = 82.2 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 73/150 (48%) Query: 8 GRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILD 67 + + +A + ++P FRP + +++ YW L P + G+ +G + D Sbjct: 7 RPVLFVFTLFLAFCVSLIPLGGFAAYFRPESICMVMFYWTLKHPGACGILVGWCVGLLWD 66 Query: 68 LISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVIN 127 ++ GSTLGV LA+++ AYLV Q + L QQ+ VV ++ +V ++ W L+ Sbjct: 67 VLMGSTLGVHALALALQAYLVLKMLQRLQMFPLIQQSFVVFIIVGIVLMLFRWINGLLAQ 126 Query: 128 VSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + ++ + +LWP LLM K+ Sbjct: 127 PATDMAYLLGALSSALLWPLFSLLMEKLEN 156 >UniRef50_B0VS17 Rod shape-determining protein n=17 Tax=Acinetobacter RepID=B0VS17_ACIBS Length = 163 Score = 81.0 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 67/155 (43%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 R W I LS ++ +L I P ++ +RP ++L+I+L+W++ P V F Sbjct: 8 REKRKDPLWGIILSIIVGSVLMIYPLSYDISGWRPLFMLMIMLFWVVCQPTWCGVWFAFG 67 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 MG DL+ + LG+ L+ I+ ++ + R L + L+ + ++ Sbjct: 68 MGIFTDLLLDAPLGLNALSFVIVTFITRFLIRERRILTFGNLWTIATLVIIAHLAFMWVT 127 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVR 156 + + + + + + WP ++ + K R Sbjct: 128 QTMGGIHFSIARHWQPLMTSILTWPVVYYCLAKWR 162 >UniRef50_Q3SM35 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SM35_THIDA Length = 166 Score = 80.6 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 68/145 (46%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 I S +A+L++ +PW +V RP++VL+ LL+W+L P RV G F +G I D G Sbjct: 14 ILGSLTLAVLVEQLPWSGLAMVLRPDFVLVALLFWVLHQPQRVGFGIAFFLGLIADFQDG 73 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + LG +A + YLV ++QA + + L V ++V +L +N Sbjct: 74 AALGQHGIAYVVGVYLVLYLRLRLLQFDPFRQAAQLFPVLLAVQLVVLLGGWLAVNPPAG 133 Query: 132 PEVFWSSVVNGVLWPWIFLLMRKVR 156 + + LW L++R Sbjct: 134 LAILMPVFGSTFLWYLSALVLRLWH 158 >UniRef50_Q8D1V7 MreD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D1V7_WIGBR Length = 168 Score = 80.3 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 97/161 (60%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M ++I+ FLI+L+LQI+ WP N + +P+WV +I +L P ++N+GTGF Sbjct: 1 MNKLNLIRIFIIYSLFLISLILQIISWPQNFNLLKPSWVYIIFSCLLLIYPEKINIGTGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G ILDL GSTLG+ +++S +AYL+ + + F +L++Q+L + +V + + Sbjct: 61 ILGLILDLHLGSTLGMHSISISFLAYLILINIKYFYKTSLFKQSLYISFFISIVKLSILI 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + ++ N + F + +++ ++WPWIF L++ + F V Sbjct: 121 IQLVISNTLLQINFFENILIDIIMWPWIFSLIKNILCYFNV 161 >UniRef50_Q1YU27 Rod shape-determining protein MreD n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YU27_9GAMM Length = 158 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 79/152 (51%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 + L+ ++A++L +MP + IV++PN++LL ++ W++ P V + +G + Sbjct: 5 NRGIAVCLTLILAVVLSLMPLSGDWIVWKPNFLLLTVMAWVMRWPDGVGIFFAASVGLLA 64 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 D++ + G V+ ++ A+ +AL + + L++ Q+ L+V L+ +V + Sbjct: 65 DILLRMSPGHSVIVFALCAFALALVSRWAKYLSMLQRTLLVALIISLVAMFEASLFIFYG 124 Query: 127 NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 S + +++ + WP+I L+ +++ + Sbjct: 125 RPSGIEYLPMKILLSMLAWPFIDRLVARMQPR 156 >UniRef50_P44476 Rod shape-determining protein mreD n=32 Tax=Pasteurellaceae RepID=MRED_HAEIN Length = 162 Score = 78.3 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 104/162 (64%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + + I F+IA +L++ PWP + +P W++L+LLYW+LA+P++V++G F Sbjct: 1 MQTRFILQWFTILSFFVIAFVLELAPWPVGFQMLKPAWLVLVLLYWVLAIPNKVSIGWSF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G DLI GSTLGV L +S Y++A Y + RNL+LW Q+L+V+L ++ +++F Sbjct: 61 LLGLTWDLILGSTLGVHALVLSTSMYIIAKNYLILRNLSLWFQSLLVVLFVFIIRLLIFL 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 EF + F + + +G+LWPW+FLLMRK+R++ + Sbjct: 121 VEFSLHTAFFHWQAILGAFASGLLWPWVFLLMRKIRRKVKLH 162 >UniRef50_B5EMQ8 Rod shape-determining protein MreD n=3 Tax=Acidithiobacillus RepID=B5EMQ8_ACIF5 Length = 158 Score = 77.6 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 74/152 (48%) Query: 10 WVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI 69 V+ L F AL+ + +P P++V L+LLYW ++ ++ +++G + D++ Sbjct: 4 VVVVLGFFFALVAEAIPCGPFYASLHPDFVALLLLYWAISSASELSFTVVWLIGLLQDMV 63 Query: 70 SGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVS 129 G LG + +A ++ YL+ R+LA W+Q + +L L ++V+ + ++ Sbjct: 64 LGDVLGAQAIAGVVMIYLLYTGIARVRSLASWEQLFFIFMLLLAHRLLVWSWQAWAGTIT 123 Query: 130 FRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAV 161 + + ++ +LWP L + +R + Sbjct: 124 WHFSLLLGPLIGALLWPLFTLTLDYLRHALRL 155 >UniRef50_A0L7I2 Rod shape-determining protein MreD n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7I2_MAGSM Length = 171 Score = 75.6 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 2/153 (1%) Query: 9 RWVIWLSFLIALLLQIMPWP-DNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILD 67 W+ LS ++A+ +Q + P VFRP+ +L+ L YW L P R G+ F G +D Sbjct: 10 PWLPLLSLMLAVAVQEVALPYQAWSVFRPDLLLVALFYWRLYRPDRCGPGSAFGAGVAVD 69 Query: 68 LISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVIN 127 L+SG +G+ L+ +I L+ R ++ LLSL+ +I LV Sbjct: 70 LLSGGPMGINALSKILITLLIRRFGPRLRATDAIFLVPILALLSLLDQMIQLGLATLVQG 129 Query: 128 VSFRPEVFWS-SVVNGVLWPWIFLLMRKVRQQF 159 R + V ++ P + + + + + Sbjct: 130 WGVRWPLLLGRVVSTALVAPLVVGALIHIHRIW 162 >UniRef50_A4J7K3 Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7K3_DESRM Length = 166 Score = 75.2 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 56/140 (40%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + L + LL + + +P+ VL+ +++ R GF+ G Sbjct: 1 MRSIVFFLLITISLLLQSTVFTFLQVAGIKPDLVLMFVVFNGFLRGSREGAFLGFLAGLA 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ +GS +G+ L + YLV L F ++ ++V ++ +V +I++ F + Sbjct: 61 QDIFTGSYIGLNALTKMLAGYLVGLAETRFYKESVIIVSMVTFVVGVVNQVILYLLLFYL 120 Query: 126 INVSFRPEVFWSSVVNGVLW 145 F ++ ++ Sbjct: 121 NVEISPYYAFGQVIIPSAIY 140 >UniRef50_C9L5U1 Rod shape-determining protein MreD n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5U1_RUMHA Length = 177 Score = 75.2 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 2/152 (1%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M R VI L +L + ++ PN +L+I + + + GF Sbjct: 1 MRVKRRIVEAVII--LLCFILQGTVFQALSIGSITPNLLLIITVAFGFMQGKLSGLWIGF 58 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 G + D+ G+ LG L I Y ++F + + L+V + L+ +V+ Sbjct: 59 FCGILQDVFYGNLLGFYALIYLCIGYATGCCCKIFYDEEIRVPMLLVAVGDLLYGTMVYG 118 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLM 152 +FL+ F + +L+ + ++ Sbjct: 119 MQFLMRGRLEFFYYFGRIAIPEMLYTVLITVI 150 >UniRef50_B0SG26 Cell shape-determining protein n=6 Tax=Leptospira RepID=B0SG26_LEPBA Length = 171 Score = 74.1 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 60/159 (37%), Gaps = 10/159 (6%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 + I + L+A L + RP+++++ ++++ L + GF G + D Sbjct: 5 KVFIIIGLLLAHFLNGSNVFELGNAIRPDFMVIFVVFFALRKGPMYGLWLGFFGGLLTDT 64 Query: 69 ISGS----------TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIV 118 G +G+ + +I+ Y+V + + ++ L+ V +I Sbjct: 65 ALGGEIGGDNLVYYKIGLHSFSYAIVGYIVGKGLRSSYTENYISITIYILGLTFVSRLIT 124 Query: 119 FWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + + + + + S+ N L P +F L + Sbjct: 125 YLLFLMFFHSNHSYSFLYVSLYNAFLGPALFFLFSWAYR 163 >UniRef50_Q31F49 Rod shape-determining protein MreD n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31F49_THICR Length = 167 Score = 73.7 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 73/150 (48%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 +W++ S+ I++++ M I F P + LLILL+W + ++ ++ + F +G + D Sbjct: 14 KWLLIFSYFISVVIDSMMILSFNINFVPYFTLLILLFWSTQILNQTHLFSAFALGLLFDA 73 Query: 69 ISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINV 128 + LG L I +L+ F+ LWQQ+++V ++ + ++ V+ Sbjct: 74 SMNTPLGSHSLIFVTITFLMLRSRLRFKGYPLWQQSMIVGSYFIIFQAMSWFIFHPVLVG 133 Query: 129 SFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + + ++ ++WP + +M ++ + Sbjct: 134 NALLYYWIEPLLAILIWPVLTQVMHRLTHR 163 >UniRef50_A5IGA1 Rod shape determining protein MreD n=5 Tax=Legionella RepID=A5IGA1_LEGPC Length = 159 Score = 73.7 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 75/140 (53%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 + L FL+AL L I+P P+ + +FRP WVLL++LY LP + + + G +LD++ Sbjct: 8 LGLGFLVALALSILPMPELISIFRPPWVLLLVLYIEYYLPGKFKLTALLIAGLLLDVLLS 67 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + +G A+ ++ ++ + K + + +L QQ ++ + I+ + + L+ Sbjct: 68 TVIGEHSFALLLVTWIASTKSRRVQFFSLIQQVCLIGFFCFLYQSIIIFIDALLGFNYNL 127 Query: 132 PEVFWSSVVNGVLWPWIFLL 151 S+++ ++WPWI +L Sbjct: 128 IMPVASAILGMIIWPWIRVL 147 >UniRef50_A5WCI6 Putative uncharacterized protein n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WCI6_PSYWF Length = 162 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 1/149 (0%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 + SF+ A ++ I P + RP ++++L++W++ P V V T F +G I DL+ Sbjct: 15 VIASFVAASVVNIYPLSLDASKLRPMALIMVLIFWLIYKPRYVGVVTAFAIGIISDLLLD 74 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + LG + A I+A+ + Q + + L A V +L+V + W + F Sbjct: 75 TRLGQQGFAAVIMAFSLRFVGQYIKQVNLPV-AWTVATGALIVFQLTLWIVQYLTQNIFY 133 Query: 132 PEVFWSSVVNGVLWPWIFLLMRKVRQQFA 160 +S +V+ + WP +F + + +++ Sbjct: 134 ASAIFSLLVSVISWPLVFFGLHRFINKYS 162 >UniRef50_Q1LU39 Rod shape-determining protein MreD n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LU39_BAUCH Length = 158 Score = 72.5 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 99/156 (63%), Gaps = 1/156 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDN-LIVFRPNWVLLILLYWILALPHRVNVGTG 59 M + Q WVIWL F +++ + + + +F P+W+ L+L+YW++ +R++VG Sbjct: 1 MTRFYRQYNWVIWLFFFFIIIILPIIPCNKPINLFWPSWLNLLLIYWVMVRQNRIHVGIV 60 Query: 60 FVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVF 119 F++ I+DLI GS LG+ L +SII Y+V +K + FRN ++QQ ++++L S + IV Sbjct: 61 FLISIIVDLIRGSKLGIHPLLISIIIYIVFIKIKFFRNKNIYQQVIIIILASAIAKFIVN 120 Query: 120 WAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKV 155 +L+++ S++ + SS+V+G+ WP + +MRK+ Sbjct: 121 ITNYLLLSNSWQTGILSSSIVDGIAWPLVLCIMRKI 156 >UniRef50_Q1IRN5 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRN5_ACIBL Length = 176 Score = 72.2 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 61/160 (38%), Gaps = 5/160 (3%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRV-NVGTGFV 61 Y I L L +P + + LL+ +Y+ ++ + + + G + Sbjct: 17 VYSFSWPVAIVAPLLAIFLQAFIPIKIHFFDVF-DLPLLVTIYFAMSRRNPITGLLQGSI 75 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G + D ++ +G+ +A +++ + + + + L+ + + + F Sbjct: 76 IGLVQDSLTRDMIGMYGIAKTLVGFAASQLGAKIDSDNPSSRFLLTLGFYIGHQSVYFLI 135 Query: 122 EFLVINVSFRPEV---FWSSVVNGVLWPWIFLLMRKVRQQ 158 ++ +V N +L ++F +M + RQ+ Sbjct: 136 ARGMVRQPIEWHWAHEMLGAVANALLAVFLFAVMDRFRQR 175 >UniRef50_C8PVZ5 Rod shape-determining protein MreD n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVZ5_9GAMM Length = 161 Score = 71.8 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 1/156 (0%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + V+ +SF+IA +L + P + +FRP W++++L++W++ P + +G FV Sbjct: 7 KKTKQHLYIVMAISFIIASVLSVYPLSAEIALFRPMWMIMMLIFWLIFQPTLIGIGLAFV 66 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 +G DL++ S +G + L ++A+ + R L+ ++ L++ + Sbjct: 67 VGLFADLLTDSRIGQQALCAVLVAFFIKFVSGYLRQLS-SNLVWLLAGACLLIYQLGLIF 125 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 L F P++ ++ V+ ++WP + +M + + Sbjct: 126 LHLFTQGVFAPQLLYTVAVSTLIWPLLVAVMLRYTR 161 >UniRef50_C7GE98 Rod shape-determining protein MreD n=12 Tax=Clostridiales RepID=C7GE98_9FIRM Length = 172 Score = 71.8 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 56/150 (37%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + V + + LL + PN ++++ + + + GF G + Sbjct: 2 RRKITVFIIIGVCYLLQTTFFDTLSFASISPNLLIIVTSSFGFMRGRKEGLFIGFFCGLL 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LD+ G LG L I Y+ + +LF + +++ L ++++++ FL Sbjct: 62 LDIFGGGVLGFYSLLYMYIGYINGMFRKLFYPEDIKLPLVLIAGSDLSCNLLIYFIMFLF 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKV 155 N F ++ +++ + + Sbjct: 122 RNRYDFNYYFLQLMIPELVYTMVITIFLYF 151 >UniRef50_D1AAV7 Rod shape-determining protein MreD n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAV7_THECD Length = 193 Score = 71.8 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 53/147 (36%), Gaps = 11/147 (7%) Query: 21 LLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI--SGSTLGVRV 78 + +P P + P+ VLL ++ L + V GF G D++ + T+G Sbjct: 30 VANRLPLPGAV---TPDLVLLSVVALALTCGPLMGVVAGFGAGLAADIVPPADHTIGRYA 86 Query: 79 LAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVF--- 135 L +I YL L + V + +L ++ ++ + + Sbjct: 87 LVYCVIGYLCGLASDEMDR-SAVVPFFAVAVGALAGTVLYAGVGMMLGDPRADWHIVARV 145 Query: 136 --WSSVVNGVLWPWIFLLMRKVRQQFA 160 V + + P++ + + +++ Sbjct: 146 VPLQVVYDVLASPFVVWAVLRAMRRYE 172 >UniRef50_C0EWW6 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWW6_9FIRM Length = 171 Score = 71.4 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 58/147 (39%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 +G L F+ +L + L PN +L+++ + + + GF G + Sbjct: 2 KRGIVTAVLVFICFILQTSVFELIKLAGITPNILLILISSVAVMRGQKPGMIVGFFSGLL 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ GST+G + ++ +++ + +++ + L+ I++ L+ Sbjct: 62 MDIFYGSTIGGFAFLYMVFGFVDGFFNRIYYSDDNILPLVLIGVNDLIYGFIMYILCGLL 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLM 152 N + ++ +++ L+ Sbjct: 122 QNHLRIIYYLKNIILPEMVYTVAVGLV 148 >UniRef50_C1F7C9 Rod shape-determining protein MreD n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7C9_ACIC5 Length = 172 Score = 71.4 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 4/126 (3%) Query: 37 NWVLLILLYWILALPHRVN-VGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 + LL+ +Y+ + + + G +G + D+ + LGV +A +II Y A Sbjct: 46 DLPLLVTIYFAITWRNPIGGTLCGAAIGILQDVPTQHPLGVYGIAKAIIGYFAASIGIRI 105 Query: 96 RNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWS---SVVNGVLWPWIFLLM 152 +L + L++ +LV IV+ E +I+ + + +VVN V+ +F L Sbjct: 106 DTESLGTRLLLIPAFTLVHGGIVWLLETHLIDQPYAWIWWLEGLHAVVNAVIGVMLFSLF 165 Query: 153 RKVRQQ 158 + R++ Sbjct: 166 DRARRR 171 >UniRef50_B7ANR5 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR5_9BACE Length = 176 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 54/146 (36%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L + +L + PN++++I + + + TGFV G I Sbjct: 2 KRKICELLLIIVFYVLQCTAGRVLAIGGISPNFLIIIPVLFGFLNGKTEGIYTGFVCGII 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL S S +G+ +AM I Y YQ + +V + + + FL+ Sbjct: 62 YDLFSYSIIGLSSIAMMFIGYFAGCFYQKYEEKEFLMPIAMVGAGDFIYGFLSYVVNFLL 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLL 151 N ++ V++ I + Sbjct: 122 HNKLDVLYYLKRFIMPEVVYTVIVTI 147 >UniRef50_Q1QDJ0 Rod shape-determining protein MreD n=2 Tax=Psychrobacter RepID=Q1QDJ0_PSYCK Length = 161 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 1/147 (0%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 VI LSF+IA L + P ++ RP ++++L++W+L P V + + F +G I DL+ Sbjct: 16 VIVLSFIIASSLSVYPLSPSMATLRPMIMIMVLIFWLLFQPRYVGIFSAFAIGLIADLLM 75 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 + LG + + +A ++ + R L A ++ L L + W + + F Sbjct: 76 DTHLGQQAFSAVAVALMIKVTSIYIRQLNTIS-AWIIASLGLFIFQASLWMLQMFVQDVF 134 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + +S +++ + WP + L +RK + Sbjct: 135 VAQSTFSLLMSIISWPLVLLTLRKFVR 161 >UniRef50_Q0AWG6 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWG6_SYNWW Length = 167 Score = 70.2 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 5/154 (3%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L F LL + + P+ VL+ ++++ L R GF+ G + Sbjct: 1 MRYLLLFLLPFTAILLQSTIFSFYGIKGTLPDLVLVFVVFFALINGARGGTIYGFLCGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL G +GV L+ + AYLV + + V + + ++VF+ Sbjct: 61 EDLYLGRFIGVNALSKAFTAYLVGHFQDRVFKENILVALIAVFFSTFINSLLVFFLALFT 120 Query: 126 INVS-----FRPEVFWSSVVNGVLWPWIFLLMRK 154 + V + S+ N VL ++L K Sbjct: 121 HDTFNVDMNIVVTVIYQSIYNTVLGVPLYLWYYK 154 >UniRef50_A5D430 Cell shape-determining protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D430_PELTS Length = 163 Score = 70.2 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 2/159 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + LL + ++ +P V+LI ++ L R GF G I Sbjct: 1 MPVFVFLLMVGAAVLLQTTVLEYAAIMGIKPELVMLIAIFNGFLLGAREGAFLGFAGGVI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL+SGS +G+ L+ + YL + F + + + + Sbjct: 61 EDLVSGSYIGLNALSCMVAGYLAGSGGERFFKENILVSTGIAFFSAAAGLTANYLLLMHA 120 Query: 126 INVSFRPEVFWSSV--VNGVLWPWIFLLMRKVRQQFAVQ 162 F + + LL + + F +Q Sbjct: 121 GIYLPALHAFLRVIFPSAAYTAVLLPLLFGRALRSFQIQ 159 >UniRef50_A1HP02 Rod shape-determining protein MreD n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP02_9FIRM Length = 164 Score = 69.1 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 5/157 (3%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + L + + + RP+ +L+I + L VG GF G I Sbjct: 1 MRTLVWSGLILITIIFQAAVIPLIGYKGVRPDLLLIIAVSTGLLFGKEQGVGVGFFAGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL SG+ G+ LA Y+ L + + L + +L I+ + Sbjct: 61 QDLASGNIFGLNTLAKMATGYVAGLAERKVFKENILLPVLATVAATLFHGAIIVVLLAGL 120 Query: 126 IN-----VSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 F N VL + LL+ +V + Sbjct: 121 GYKVDIAAVFIYNFLPQLAYNVVLAIPVHLLVVRVSR 157 >UniRef50_D2BCD8 Putative uncharacterized protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BCD8_STRRD Length = 176 Score = 68.7 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 53/157 (33%), Gaps = 6/157 (3%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 + + ++ +P P P+ VLL ++ + L GF G D+ Sbjct: 10 GVFLLVMVFQVTVVNRLPLPGEGA---PDLVLLTVVGYALVRGANAGAVMGFCAGLASDV 66 Query: 69 I--SGSTLGVRVLAMSIIAYLVALKYQLF-RNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 + + LG L + +I ++ + + L A V + + + + Sbjct: 67 LPPAAHVLGQHALVLCLIGFMAGRVVESYPDAGQLTTLACAVAGPLVAAGVGALLGDDRI 126 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + + N + P + + +V + V+ Sbjct: 127 SRSMLTATLPQAVLYNLLAAPPVVWAVTRVVRGPRVR 163 >UniRef50_C5RGQ5 Rod shape-determining protein MreD n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGQ5_CLOCL Length = 164 Score = 67.9 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 58/154 (37%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + + + L + +P N+ + P+ +++ +L + + + G + G Sbjct: 2 KKIITIAVLIILLYIMDSTWVPLFINIYGYTPSLLMIFILSYSIINGSYEGIWVGAIAGI 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 D+ T GV ++ +L + ++V + + II+ ++ Sbjct: 62 FQDVFFIHTFGVNGFINVLLCFLAGHVGKSLFRQKRAVPTILVGFFTAIKQIIIMGYLYI 121 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + + S+ N +L +I+ + K+ ++ Sbjct: 122 YGASANIYTIIAPSIFNLILAFFIYKWIYKLCKK 155 >UniRef50_B1I4Q2 Putative uncharacterized protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4Q2_DESAP Length = 164 Score = 67.9 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 52/118 (44%) Query: 23 QIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMS 82 + + +P+ VL++++Y+ + R GF+ G D +SG LG+ LA++ Sbjct: 18 STVLEFIRVAGVKPDLVLVLVVYYAIFNGPREGAFLGFLGGLAHDFLSGYYLGLNALAVA 77 Query: 83 IIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 Y+V L + + A + L +++V+ I + + E +W ++ Sbjct: 78 ASGYVVGLGHIRLFKENHFVVAGIAFLATILVEGIRYLLLLFLGVTILPGEAWWGLII 135 >UniRef50_B4V3T9 Rod shape-determining protein n=18 Tax=Streptomyces RepID=B4V3T9_9ACTO Length = 243 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 9/163 (5%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDN-LIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 R + ++AL++Q+ L P+ VLL ++ L H GF G Sbjct: 2 RFNRILLSATLVVVALVIQVSVLGRLQLPGAVPDLVLLTVVALALVYGHVSGALIGFGAG 61 Query: 64 AILDLI--SGSTLGVRVLAMSIIAYLVALKY-QLFRNLALWQQALVVMLLSLVVDIIVFW 120 + DL + G L + +I YLV L R + W L V+ ++ ++ Sbjct: 62 LLADLAPPADHAAGRYALVLCLIGYLVGLARPDSGRFRSAWGPMLTVVAAAIGSTLLYAG 121 Query: 121 AEFLVI-----NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 LV +V +F +++ + +L P+ + + ++ Sbjct: 122 VGALVGDTAARHVGLTGLLFTATLYDLLLAPFTVPFIMALARR 164 >UniRef50_Q73N05 Rod shape-determining protein MreD n=1 Tax=Treponema denticola RepID=Q73N05_TREDE Length = 172 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 52/131 (39%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + W F I LL + + P+ VLL ++Y ++ + GF+ G Sbjct: 2 KKVILWTSLSVFFITLLQTAIFSHISFFTVLPDLVLLTVIYIAISNGSLTGLICGFIAGL 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + D +S + +G+ ++ YLV Y ++ + ++ L + +++F + L Sbjct: 62 LADFLSAAPIGLHSFIFTLTGYLVGKFYGIYNLNKVIFPCILGGLGFVFKVLLLFVLKIL 121 Query: 125 VINVSFRPEVF 135 +F Sbjct: 122 FGQNIHTYNIF 132 >UniRef50_A5CW44 Rod shape-determining protein MreD n=3 Tax=Gammaproteobacteria RepID=A5CW44_VESOH Length = 156 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 1/154 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M R +++ ++F AL+L ++P L+ W+LL+ +YWI+ ++ Sbjct: 1 MNVQRRPYIFLMKITFF-ALILSVIPLNKLLLGASAFWLLLLYIYWIVYFSTKLKFFIAL 59 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 ++G ++D++ G LG LA+ + ++ Q F L Q + + + S + + Sbjct: 60 ILGTLVDILHGDILGQNALALIFSSLFISNIKQSFFLSNLSTQQVYIFISSSIYLVFFLL 119 Query: 121 AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRK 154 L +F + + +WP + L+ K Sbjct: 120 IFVLTQGFIINYYLFLAPFTSAFIWPVVQFLLSK 153 >UniRef50_C8W5R8 Rod shape-determining protein MreD n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W5R8_DESAS Length = 166 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 60/158 (37%), Gaps = 5/158 (3%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + V+ + + L+ + + +P+ VLLI++ + GF+ G Sbjct: 1 MRVFTVLIILLITMLIQSTVLGFIRVGGVQPDLVLLIVILNAFLRGSKEGAFLGFLAGLC 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++SG+ +G LA YLV L ++ V L S++ II + ++ Sbjct: 61 QDVLSGNYIGFNALAKMGSGYLVGLAESKLFKDNIFVLFGVTFLASVLCQIIYYLLLIIL 120 Query: 126 INVSFRPEVFWS-----SVVNGVLWPWIFLLMRKVRQQ 158 + + N +L P F L + R + Sbjct: 121 GVMVTPFWALLRIILPVAFYNTLLVPIFFKLFYRSRIR 158 >UniRef50_C9KMZ2 Rod shape-determining protein MreD n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMZ2_9FIRM Length = 164 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 47/144 (32%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 ++ L + + +LL + RV +GF +G + Sbjct: 2 KNAGVTALAVIILYALQTSLLPLIAYHGVTADLLLLFVTSTAFLKGARVGALSGFAVGLL 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL SG+ LG+ ++ + V + + ++++ I+ L+ Sbjct: 62 QDLASGTFLGMNAFTRLVLGFCVGKFSDQVFKEQFFLPVVASLVVTTANYFILALLMLLL 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIF 149 +++ +++ +F Sbjct: 122 GYRFNLMGHMQYTLLPMLIYQLVF 145 >UniRef50_B8FVF2 Rod shape-determining protein MreD n=2 Tax=Desulfitobacterium hafniense RepID=B8FVF2_DESHD Length = 169 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 4/153 (2%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +I + +L + + + +P+ VLL +Y L G G + Sbjct: 2 RRNILIIVMLLFSLILPGTVFYFWSWGGIKPDLVLLFTIYMALHHRTLPGALWGLGAGML 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D G G+ L ++++A L Q + + AL+V L++ V + ++ + LV Sbjct: 62 ADFYLGRHFGMYALTLTVVALLSDWLSQRWYRENYFLIALLVFLVTFVGEGLIAFLNILV 121 Query: 126 INVSFRPEVF----WSSVVNGVLWPWIFLLMRK 154 + F SV N VL P + + + Sbjct: 122 GARWSLSDAFRLVIGVSVYNAVLVPLTYPWIHR 154 >UniRef50_C8PRS7 Rod shape-determining protein MreD n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PRS7_9SPIO Length = 166 Score = 65.6 bits (159), Expect = 6e-10, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 5/163 (3%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R W I +FL+ + + + P+ +L++++Y L V GF G Sbjct: 2 RKVVLWTIAAAFLLGIFETAILSHIRFLPALPDLILILVVYIALHNGTVAGVTAGFFSGL 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 I D +S + +G+ +++ +L L Y+ + + ++ + + + I+F L Sbjct: 62 IFDFLSLAPMGLHSFVFTVLGFLYGLLYRKYNVRRFFFPFILGLSATFLKAGILFILNIL 121 Query: 125 VI-----NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + N V P +F+L+ F ++ Sbjct: 122 FGQSIQVYNLLALSFWIEAAGNAVCAPLLFMLLGLFPNAFEIK 164 >UniRef50_C9R8K4 Rod shape-determining protein MreD n=1 Tax=Ammonifex degensii KC4 RepID=C9R8K4_AMMDK Length = 163 Score = 64.8 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 6/163 (3%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 Q ++ L LL + + RP+ +L++ + R G V G I Sbjct: 1 MQTFILLLLIGFSLLLQTTVLTYLRVAGVRPDLLLILAAFIGFWRGPREGGLWGAVAGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL++G +G+ L + YL F + ALV ++LV +++ + + Sbjct: 61 CDLVTGGFVGLNALTKLLAGYLAGQAGAFFYRESSLTCALVTGSVTLVAELVTYLLLLFL 120 Query: 126 I-----NVSFRPEVFWSSVVNGVLWPWIFLLM-RKVRQQFAVQ 162 +F + + N + +F L R + ++F V+ Sbjct: 121 GIRLPFKSTFVYLILPVTAYNAIAAVVLFHLWQRLLPRRFKVR 163 >UniRef50_B2S393 Rod shape-determining protein n=2 Tax=Treponema pallidum RepID=B2S393_TREPS Length = 168 Score = 64.8 bits (157), Expect = 1e-09, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 5/155 (3%) Query: 10 WVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI 69 W + SFL +++ + + + P+ VLL++L+ + + TGF+ G I D + Sbjct: 7 WSVGTSFLFSIVEMAVFVHVSYLSIMPDLVLLVVLFTSIHNGVVAGIWTGFIAGIIFDFL 66 Query: 70 SGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI--- 126 S S G+ + I ++V + ++ A++ + +V + Sbjct: 67 SISPFGLHSFVFTTIGFMVGKVQGRYHIDRVFAPAVLAGFAMIFKVGLVLVLRGVFGPNI 126 Query: 127 --NVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 F +++ +N V P++F L+ F Sbjct: 127 QVYSVFSRQLWIEMTLNIVFVPFVFGLLNMFPTTF 161 >UniRef50_A5ZRS3 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRS3_9FIRM Length = 175 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 58/147 (39%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + + L+ + ++ PN +L++ + L + + TGF G + Sbjct: 2 KSKIVLFFTIIVCFLMQSTVLHLISIGSITPNLLLILCVSMGLMRGRKSGLWTGFFCGLL 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL GS G L +L ++++ + + L+ ++ + ++ V+ +FL+ Sbjct: 62 VDLFYGSVFGFYALIYMYAGFLSGYAFRIYYDDDIKVPMLLTAIMDFLYNLAVYALQFLL 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLM 152 F +V + + ++ Sbjct: 122 RGRLGLGVYFTRIIVPEIFYTVFLTMI 148 >UniRef50_C0CHV5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CHV5_9FIRM Length = 176 Score = 64.1 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 46/121 (38%) Query: 20 LLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVL 79 LL + + N ++++ + L + + TGF G ++DL G G+ L Sbjct: 16 LLQCTVLQTFAIGSISANLLVILCVSMGLLRGKKTGMFTGFFCGILVDLFYGPVFGLYAL 75 Query: 80 AMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSV 139 + Y +++ + + V + L+ + V+ +FL+ F + Sbjct: 76 IYMYLGYFSGFGCKIYYDDDMKVPMCFVGIGDLLYNFAVYGLQFLLRGRLGFGTYFLKIM 135 Query: 140 V 140 + Sbjct: 136 I 136 >UniRef50_A8MHM1 Putative uncharacterized protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MHM1_ALKOO Length = 165 Score = 64.1 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 57/140 (40%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + + L +L N++ PN +++++ + + + GF +G + Sbjct: 1 MKFIIISIIVVLNLILQSTTLQWFNILGTLPNTAIILVISFAVHSGKKQGAIIGFFVGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ G +G+ LA +I Y V L Q + ++ L ++ +++ FL+ Sbjct: 61 QDITFGRIIGMNALAYMLIGYTVGLTEQKIFKGNILIPIILTGLATIFYELMNLLLIFLL 120 Query: 126 INVSFRPEVFWSSVVNGVLW 145 +F ++ +++ Sbjct: 121 GYRIELLNIFKKMLIVELIY 140 >UniRef50_Q01ZY2 Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZY2_SOLUE Length = 177 Score = 63.3 bits (153), Expect = 3e-09, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 61/158 (38%), Gaps = 5/158 (3%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRV-NVGTGFVMG 63 R I + L L +P + F LL+++Y+ + +++ + G ++G Sbjct: 20 RFHAWAYIVVPLLAILFQVYVPMFFQFLRFV-EMPLLVVVYFSIMQRNQITGLTIGALVG 78 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 D +S S LG+ + +++ Y A + L+ + + Sbjct: 79 LAQDSLSDSPLGMYGIVKTLVGYFAASVGVRLDVEHSLIRLLLCFFFYIFHQFFFWVMSH 138 Query: 124 LVINVSFRPEV---FWSSVVNGVLWPWIFLLMRKVRQQ 158 ++ + +V+N ++ ++F + ++R++ Sbjct: 139 ALLAKLGPFDWPGTVVQAVLNAIIGVFLFSFLDRLRER 176 >UniRef50_A6TQI1 Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TQI1_ALKMQ Length = 165 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 48/120 (40%) Query: 21 LLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLA 80 L + + PN L++++ + + + + GF +G + D++ +GV L Sbjct: 16 LQSTIFQFFKIYNVVPNTALILVIAFAIHMGKQKGAVVGFFIGILQDILFSQIIGVNALV 75 Query: 81 MSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 + I+ Y V Q L ++ + ++ + I +L+ ++F ++ Sbjct: 76 LMIVGYFVGSMNQKIMRDHLAVPFVLTVGATVFYEFISVLFLYLLRYQVTILDLFSRVLI 135 >UniRef50_C4Z086 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z086_EUBE2 Length = 177 Score = 62.5 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 52/154 (33%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L L+ + ++ PNW++++ +++ + GF G + Sbjct: 2 KRKISELILILFFYLMQVSLARVISIANISPNWLIILPVFFGFFAGKNEGMFVGFFAGIM 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL G L I Y YQ + + +V++ I + FL+ Sbjct: 62 YDLFFSGLFGFTALVFIYIGYFSGFLYQKYEVREILIPLALVIIADFGYGFISYIGNFLL 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 N ++ V++ + L+ + Sbjct: 122 YNRLNVGYFMSRFILPEVVYTALVSLLVYHPIHY 155 >UniRef50_A5Z699 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z699_9FIRM Length = 177 Score = 60.2 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 51/144 (35%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + + +L + PN +L++ + TG Sbjct: 1 MKRRVLNIVITGAIIIVSFVLQSYLSLVSGQSFVVPNLLLIVTSIFGFIKGSNYGSVTGL 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 G ++D+ G +G+ L I ++ + ++ + ++ LVV + + ++ + Sbjct: 61 FCGLLVDVAFGDVIGLFALIYMYIGFISGVFKKILYSDHIFMPMLVVFVNDFLYNLAYYV 120 Query: 121 AEFLVINVSFRPEVFWSSVVNGVL 144 FL+ N F ++ ++ Sbjct: 121 FRFLLRNKLDFSYYFEKVILPEMI 144 >UniRef50_B0M9U3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0M9U3_9FIRM Length = 172 Score = 59.8 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 5/155 (3%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + I LL + L PN +L++ + L + +G GF G + Sbjct: 5 KRTLFYILSVIFCFLLQTSVFQFLKLADVMPNVLLILTVTLGLIRGKKAGIGIGFSCGLL 64 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D+ G LG L +I Y+ F + ++++ +L +F+ F + Sbjct: 65 IDIFFGDVLGQYALLYLLIGYINGCFNSFFYEDDVLLPFGLLVINTLAYSFAIFFFFFAL 124 Query: 126 INVSFRPEVFW-----SSVVNGVLWPWIFLLMRKV 155 +V G++ ++ L+ + Sbjct: 125 RGRFAFFSYLKDIMIPEAVYTGLIALPLYKLLLFI 159 >UniRef50_Q9RH81 Rod shape determining protein MreD (Fragment) n=1 Tax=Pseudomonas fluorescens RepID=Q9RH81_PSEFL Length = 95 Score = 59.1 bits (142), Expect = 5e-08, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 51/92 (55%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 MA+ S+ W++WL+F I +LL + P P + + RP W+ L+L +W L LPH+V + T Sbjct: 1 MANTHSRNGWIVWLTFAIGMLLSVSPLPQFMEILRPLWLALLLAFWSLNLPHKVGMVTAM 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKY 92 +G D++ G+ LG L + + L Sbjct: 61 FLGLAEDVLYGTLLGQNALITKVYSPLSMTLS 92 >UniRef50_C4FYQ2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYQ2_ABIDE Length = 169 Score = 57.9 bits (139), Expect = 1e-07, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 56/147 (38%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + ++ L+ + + +PN V+++++ + GF MG Sbjct: 2 KRIIGSFIMMIILYLIQTTIFNKIAIAGIKPNVVIILVVAIGYKYGKIPGMMMGFFMGLF 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LDL +G + I YL+ +L+ + +V LV++ ++F FL+ Sbjct: 62 LDLSESDYIGYYAVIYLTIGYLLGFGNKLYSGESNLIPIGLVGASDLVLNFLIFVTGFLL 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLM 152 N P ++ ++ I + Sbjct: 122 RNRLDFPYYIMRIILPEAVYTMIVAAL 148 >UniRef50_C6LCB6 Rod shape-determining protein MreD n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LCB6_9FIRM Length = 173 Score = 57.5 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 52/148 (35%), Gaps = 1/148 (0%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + LL + ++ PN +++ + + L R + GF+ G + Sbjct: 2 RTKLILFATMLVCLLLQCSLFPAISIASITPNLMIVFTVSFGLMRGKRSGLILGFLCGLL 61 Query: 66 LDLISGSTL-GVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 DL+ G+R I Y Y +F + + L+ V + + +FL Sbjct: 62 TDLMLPDLFVGLRAFVYMFIGYFSGYCYHIFYDEDIKMPVLLTAAGDFVYGCLFYITKFL 121 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLM 152 + ++ +++ + ++ Sbjct: 122 LRGRIDLFYYIRRIILPEMIYTILLTII 149 >UniRef50_UPI0001BC32A8 hypothetical protein BcroD2_07178 n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32A8 Length = 181 Score = 57.1 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 53/139 (38%) Query: 17 LIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGV 76 L AL + ++ PN +L+ + TGF G ++D+++G +G Sbjct: 14 LYALQCTLFASTLSVAGITPNLILMFTCIVGYMRGRASGIFTGFFSGLLVDIMAGKIIGF 73 Query: 77 RVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFW 136 L + +L + ++ + L L+V+ + I VF FLV N Sbjct: 74 TALLYMLAGFLNGIFHKEYVKEQLIFPILLVLSCDFLYGIAVFVTGFLVRNKLSFGFYVV 133 Query: 137 SSVVNGVLWPWIFLLMRKV 155 + +++ + + V Sbjct: 134 RIIFPEIIYTGVITIFAYV 152 >UniRef50_C0D9Y3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C0D9Y3_9CLOT Length = 180 Score = 56.0 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 54/151 (35%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + Q + L L + + + PN +L++ + + G + Sbjct: 6 NAKIKQFLLNVVLILLAFTIQNCVFPLLPFLAATPNLLLILTFSFGFIHGKGAGMLYGVL 65 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 G +LDL G LA I Y+ + + + + ++ + L + V+ Sbjct: 66 SGLLLDLFYSGPFGFYTLAYIYIGYINGIFTRYYYEDYITLPLILSVFNELAYSMYVYVF 125 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLM 152 FL+ P F + ++ +++ + L+ Sbjct: 126 RFLIRGRLDLPYYFRNIMLPEIIFTVVTTLL 156 >UniRef50_UPI00016C006C hypothetical protein Epulo_06690 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C006C Length = 171 Score = 56.0 bits (134), Expect = 5e-07, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 2/132 (1%) Query: 6 SQGRWVIWLSFLI--ALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 + RW I +S L+ L + + PN++ +I++ + L GF G Sbjct: 1 MKLRWFITVSILVLAFTLQNTLGDFVRIAGVSPNFLTMIVVAFSLLRGKNEGTIIGFFGG 60 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 I D+ G+ ++ II ++ + + L SL + + Sbjct: 61 VIYDISYSYIFGIYSVSYMIIGHMCGKLHHFCYRENKILPIMCTGLSSLFLSSVNILRFI 120 Query: 124 LVINVSFRPEVF 135 L+ N++F F Sbjct: 121 LIGNINFSYFYF 132 >UniRef50_Q3AF77 Rod shape-determining protein MreD n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF77_CARHZ Length = 161 Score = 55.6 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 51/157 (32%), Gaps = 5/157 (3%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + ++ Q + + +P+ +L++ + G G I Sbjct: 1 MSNLKAMLYFLFFYIIAQTVFSRLAVNGVKPDLILILTVILSFLYGPPRGAFFGMQGGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL +G +G+ L + +L + W ++V +L+ V D + L+ Sbjct: 61 EDLFTGHFIGLNTLVKMVTGFLAGVLEGKIYPENWWFPGVIVFVLTFVKDFLYVAFLNLL 120 Query: 126 INVSFRPEVF-----WSSVVNGVLWPWIFLLMRKVRQ 157 E F ++ N L P + + + Sbjct: 121 GINIALTEAFGRIMPVEALYNFFLTPVFYFFFYRAVR 157 >UniRef50_A7VBA9 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7VBA9_9CLOT Length = 168 Score = 55.6 bits (133), Expect = 6e-07, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 59/147 (40%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L + +L + + P+ +L++ + + L + + GF G + Sbjct: 2 KRVIILGILITICFVLQTALFPFLEIAGIAPDLMLILTVSFGLMRGRKEGMLVGFFCGFL 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ G +G ++ I+ Y ++L+ + +++++ L+ + + FL+ Sbjct: 62 YDVYFGYAIGPFMILYMILGYCNGFFHRLYLVEDVLLPIIIILVDDLIFNFATYVIFFLM 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLM 152 N ++ +++ + L+ Sbjct: 122 RNRLEFATYLKDIILPEMIYTALITLI 148 >UniRef50_C1QD51 Rod shape-determining protein MreD n=2 Tax=Brachyspira RepID=C1QD51_9SPIR Length = 180 Score = 54.8 bits (131), Expect = 9e-07, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 4/114 (3%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 + +P+ +L+ L++ + GF++G + D++S T G + I + V Sbjct: 29 ALGAKPDLLLIFLVFISFRYGSFDGIIYGFIIGLLQDIVSSGTFGSYAIIFLNIGFFVGF 88 Query: 91 KYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVL 144 +Q + ++LV +I A FLV ++ + +L Sbjct: 89 FNTRIF----IKQIAAGIFVTLVGYLIKIIALFLVTSIYSDLSNVAVLIRAELL 138 >UniRef50_C4GB48 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GB48_9FIRM Length = 178 Score = 53.3 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 9/160 (5%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + F LL L + PN ++++ + + GF G Sbjct: 9 RRFLVTGLMIFTCLLLQMGALPKLKLGIVMPNLMVILTSTAGFMRSQKQGMLMGFFCGIA 68 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 LDL S G L +I L L LF L ++ L+ ++++ + F + Sbjct: 69 LDLFSSQVFGYYALIYLLIGSLNGLFRHLFFGDDLKMPLAMIAASDLLYGLMIYISAFFL 128 Query: 126 INVSFRPEVFWSS---------VVNGVLWPWIFLLMRKVR 156 + V++ +L+P I+ + R ++ Sbjct: 129 HGNREFLFYLLNIMIPEAVYTGVISLILYPLIYRIYRWMQ 168 >UniRef50_UPI0001BCE78D hypothetical protein SnoxA4_08100 n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCE78D Length = 165 Score = 52.9 bits (126), Expect = 4e-06, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 40/121 (33%) Query: 29 DNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLV 88 + P+ ++L + + GF +G + DL +GS G+ +++I + Sbjct: 25 IAVHGVIPDLLVLATVSYAFLRGSVWGSFVGFSLGIMQDLSAGSFFGLNAFTLTLIGLVF 84 Query: 89 ALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWI 148 + + +L ++ +L+ + +++ I Sbjct: 85 GRFSDRVFKEQFFLPITASVAATLAKYLMSALIVYLLGYHFNPLLHMGRVLFILLIFQLI 144 Query: 149 F 149 F Sbjct: 145 F 145 >UniRef50_C9LXR8 Rod shape-determining protein MreD n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LXR8_9FIRM Length = 166 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 52/145 (35%), Gaps = 1/145 (0%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + + + + +L + N +L++ + W L R GF+ G Sbjct: 4 YRRIFFWLAFVIALFVLQTSFFPVFSWNGVSVNLMLVLTVSWSLLYGARRGAFLGFMTGL 63 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + DL +G G+ V A++II Y + ++ A+ M + V L Sbjct: 64 LQDLTTGMFFGMDVFALTIIGYATGAFSRNVFKDPVFLPAMATMWATAAHYFFVLVLMLL 123 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIF 149 + F +++ + W +F Sbjct: 124 LGYG-FSLLYVVKTLLPALCWNVLF 147 >UniRef50_Q2RL20 Putative uncharacterized protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RL20_MOOTA Length = 169 Score = 52.5 bits (125), Expect = 5e-06, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 38/120 (31%) Query: 23 QIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMS 82 + L + + + ++L + L GF G + DL G +G+ L+ Sbjct: 18 ATLLPALKLAGVKADLLTIVLTIYALFQGPSRGAVLGFGYGLLEDLYLGRYVGLNALSKM 77 Query: 83 IIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNG 142 + Y++ L ++ + ++V + L + ++ Sbjct: 78 LTGYIIGLGKDRLNQDNWLVPGIMAFFAIICQGLLVLFLTLLAGFRFPLLAGLEAVILPM 137 >UniRef50_B0TBY4 Rod shape-determining protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBY4_HELMI Length = 167 Score = 51.7 bits (123), Expect = 8e-06, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 41/123 (33%) Query: 21 LLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLA 80 L + L P+ VL+++++ + R G G LD+++G +G+ LA Sbjct: 16 LQTTLMDKLALGGVTPHLVLILVVFTAILKGGRFGSFFGAGAGLFLDMLTGRYIGLNALA 75 Query: 81 MSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 ++ A L L V+ ++ F F + + Sbjct: 76 LAATAGLCGFIEGRLYKDNLLVPIGCVLAGTVAYHTFAFLLGSFAGLPFAVGGFFMTLLT 135 Query: 141 NGV 143 + Sbjct: 136 QAL 138 >UniRef50_B8I6C4 Rod shape-determining protein MreD n=2 Tax=Clostridium RepID=B8I6C4_CLOCE Length = 170 Score = 51.4 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 59/160 (36%), Gaps = 5/160 (3%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R++ L F+ + + PN V+++++ L GF G Sbjct: 2 RNKVILYAILIFIFVTAQVTLLNSITIFGVAPNLVIILIVSISLLKGKTDGAVVGFSAGL 61 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 +D + G LG L ++ L+ + + A L + + + + + +L Sbjct: 62 CMDAVIGVALGYHALVGMLLGLLLGNINKRLFKENILVMAFCTFLSTYIFESAILFTSYL 121 Query: 125 VINVSFRPE-----VFWSSVVNGVLWPWIFLLMRKVRQQF 159 + +F S+VN VL +FL++ + + F Sbjct: 122 MGLKVEFFTILKTVIFPESLVNCVLGVIVFLVIILLNRGF 161 >UniRef50_C7HFS8 Rod shape-determining protein MreD n=3 Tax=Clostridium thermocellum RepID=C7HFS8_CLOTM Length = 176 Score = 51.4 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 5/150 (3%) Query: 13 WLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGS 72 L F+IAL+ + ++ +PN +L+ ++ L + TGF+ G D++SG Sbjct: 15 ALIFIIALIQSTVLESISIFNIKPNLLLIFIISVALLGSNIEGAVTGFLCGLTQDMLSGR 74 Query: 73 TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVS--- 129 +G L + +AL + + + S++ + V++ + Sbjct: 75 VIGFYALLGLYLGLGIALINKRLYKENVLVAIFTTFVSSIIYEFAVYFFVNVFKGSLELI 134 Query: 130 --FRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 FR + +V N + IFL++ K+ Sbjct: 135 FPFRYIILPEAVYNSAVSIVIFLIVLKINH 164 >UniRef50_C7LYA8 Rod shape-determining protein MreD n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYA8_ACIFD Length = 167 Score = 51.4 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 5/129 (3%) Query: 30 NLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVA 89 ++ P+ V+ ++ GFV G +D + G+ L ++ YL Sbjct: 28 TILGVHPDLVMAMVAAIGAVRGRESGAIAGFVGGIAVDAFLSTPFGLSALIYVVVGYLAG 87 Query: 90 LKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSV-----VNGVL 144 ++ L + +VV L SLV + + AEFL+ + + VN V+ Sbjct: 88 EVERIDGGAPLAVRWIVVGLASLVGEGLFVVAEFLLGLANPLQTRLVEQILVVGGVNLVI 147 Query: 145 WPWIFLLMR 153 P + L+R Sbjct: 148 APVVLGLVR 156 >UniRef50_Q1JVG6 Rod shape-determining protein MreD, putative n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVG6_DESAC Length = 169 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 5/146 (3%) Query: 16 FLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLG 75 L LL + RP+ VL++ LY + T +++G +LD+ SG+T G Sbjct: 12 LLFILLQTSLFPALVGNGPRPDLVLILTLYLGIHSSPLQGAFTSWLLGCLLDVFSGTTFG 71 Query: 76 VRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV-----INVSF 130 + L + ++ L + +L + D+++ Sbjct: 72 LYGLILLLVFCATYLGGRQLNRDNAAVMFFAAVLGTAAHDVLLITTLLFFADADQGWRIV 131 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVR 156 ++ ++N + +R+ R Sbjct: 132 LFQLPMQLLLNILAVLVATPFLRRTR 157 >UniRef50_D1C5P2 Rod shape-determining protein MreD n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5P2_SPHTD Length = 211 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 63/157 (40%), Gaps = 4/157 (2%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 R + + + A + + N++ PN +L+++L W + F +G Sbjct: 46 RVTRLFFALILIITAFVQITVFPVVNVLGIGPNLILVLVLVWSGLRGAPEGLLWVFPLGL 105 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 +LD+++ LG LA+ +A + L + + L + V+ +L ++ L Sbjct: 106 LLDVLTLDPLGSNGLALVPVALIGGLARRRLFHSGLIIPLVAVVGATLAHHVVTLLVSLL 165 Query: 125 VINVSFRPEV----FWSSVVNGVLWPWIFLLMRKVRQ 157 ++++N ++ P ++L + + + Sbjct: 166 AGTSYPFLASVRLGILTALLNVMVVPPMYLFVLLMER 202 >UniRef50_A8RTL3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RTL3_9CLOT Length = 177 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 51/150 (34%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVM 62 + Q I L + + + PN +L++ + + G + Sbjct: 4 AKIKQVLINILFIVLAFTVQNCVFPLLPFLSATPNLLLILTFSFGFIHGKNAGMFYGVLS 63 Query: 63 GAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE 122 G +LDL G L I Y + + + + ++ + + + ++ Sbjct: 64 GLLLDLFYSGPFGFYTLIYIYIGYANGIFTKYYYEDYITLPLILSIFNGIWYSMYIYIFR 123 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLM 152 FL+ P F + ++ +++ + L+ Sbjct: 124 FLIRGRLNLPYYFRNIMLPEIIFTAVTTLL 153 >UniRef50_C4V388 Rod shape-determining protein MreD n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V388_9FIRM Length = 164 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 39/121 (32%) Query: 29 DNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLV 88 ++ P+ ++L + + GF +G + DL +GS G+ +++I Sbjct: 25 ISIYGVVPDLLILATVSFSFLRGSVWGALVGFFLGLVQDLSTGSFFGLNAFLLTLIGLFF 84 Query: 89 ALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWI 148 + + + + +L+ ++ +L+ I Sbjct: 85 GRFSDRVLQEQFFFPITASVAATAAKYLSSALVVYLLGYRFNLFLHMGRILLVLLLFQVI 144 Query: 149 F 149 F Sbjct: 145 F 145 >UniRef50_B1BCX2 Rod shape-determining protein MreD n=4 Tax=Clostridium RepID=B1BCX2_CLOBO Length = 163 Score = 50.6 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 61/154 (39%), Gaps = 1/154 (0%) Query: 5 RSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGA 64 + + L L +MP + P+ V + ++++ + + + G G Sbjct: 2 KKVITVALILILFTILDNSLMP-FLAIRHIYPSLVFIFVVFYSIINGNASAIYVGVFSGL 60 Query: 65 ILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 + D+ + +GV + +I L A + + LS++ I++F +L Sbjct: 61 LQDVYLMNGIGVNMFINMVICLLAAQIGKTIFKDKSVIPIITCFGLSILKGILMFIILYL 120 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 V S+ V + S+ N ++ I+ + + Q+ Sbjct: 121 VGQRSYFNTVLYVSLYNMIISILIYKKVYILCQK 154 >UniRef50_C5RUB4 Rod shape-determining protein MreD n=9 Tax=Thermoanaerobacter RepID=C5RUB4_9THEO Length = 172 Score = 50.6 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 50/119 (42%) Query: 22 LQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAM 81 + ++ +P+ V +++L + L + G I D++ + LGV ++ Sbjct: 17 QATLFRFIDIFGVKPDAVFIVVLSFSLLNGSWEAIYLSLFGGLIQDILFNNALGVTTFSL 76 Query: 82 SIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 I++Y+ L + + + + V L +L+ +++ ++ L+ F + + Sbjct: 77 LIVSYITGLLSKSVFKESSFVAFVFVFLGTLLYNLVTMFSMVLMKYEFNFLLDFMNIAM 135 >UniRef50_UPI0001C31D92 rod shape-determining protein MreD n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31D92 Length = 193 Score = 49.4 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 5/150 (3%) Query: 13 WLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGS 72 L F+ ++ + + L++ L GF +G +DL Sbjct: 14 ALGFVAVIVQIAAISQITVFGVSVDLAPLLVASVGLLAGSLPGAIFGFAVGLFVDLALVQ 73 Query: 73 TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP 132 TLGV L +I Y +L V + + + +FL+ + Sbjct: 74 TLGVTSLLYILIGYAAGRLRELRDPAHGLVPVFVGAAATAIATVGFALMQFLLGVQAPVS 133 Query: 133 EVFWS-----SVVNGVLWPWIFLLMRKVRQ 157 + ++ + ++ L+R++ Q Sbjct: 134 WLLLRQVVVTILLGALFAVPVYALVRRIVQ 163 >UniRef50_Q97JM9 Predicted membrane protein n=1 Tax=Clostridium acetobutylicum RepID=Q97JM9_CLOAB Length = 163 Score = 49.4 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 16/153 (10%), Positives = 62/153 (40%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + ++ + + + + P+++ + ++ + + + G + Sbjct: 2 RKILTLLLCILGFTFVDNCIAPFIAIRGYYPSFLFVFIISYAIINEGWQGIIIALAAGFL 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ + +GV + I+ Y + + + +++ +S+ I++F +L Sbjct: 62 QDIYLFNGIGVNLFINLILCYAAGVIGRSLFKEKAFIPTVIIFFMSVARGILMFVILYLC 121 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + S F++S+ + ++ +++ + K+ Q+ Sbjct: 122 GSYSDIGSSFYASIYDFIIAIPMYIWVYKLCQK 154 >UniRef50_Q1PZX3 Similar to rod shape-determining protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZX3_9BACT Length = 165 Score = 49.4 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 61/155 (39%), Gaps = 4/155 (2%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + I+L + N+ P+ +++++ + + NV T + +G Sbjct: 1 MRWITFFCILLCISLFQSTLMNWINIGTATPDLYFSLVVFYSFFIDVKRNVVTSWFIGIS 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFL- 124 DL+S TLGV + + + + + L + LV + SL+ +++ + Sbjct: 61 KDLLSEGTLGVNAIFFVAVGFFIWSIRGVLFRGHLVTKILVTFIFSLLYNVLYALHTAIS 120 Query: 125 ---VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVR 156 S +F S + P++F L K++ Sbjct: 121 CRSADISSTIWMIFICSSYTAAVTPFLFYLFNKLQ 155 >UniRef50_C6P9K0 Rod shape-determining protein MreD n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9K0_CLOTS Length = 173 Score = 49.4 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 58/130 (44%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L + +L + ++ +P+ +L++++ + L + G + Sbjct: 1 MRSIYKYLLIIFVIILQATLFRYIAILGVKPDALLILIIAFSLLNGPNEGILLSLFGGIL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +D++ + +G +++ +AYL L + + + + V L +++ ++I+ ++ L+ Sbjct: 61 VDVLFNNAIGFVTISLLSVAYLTGLLSKNVFKESTFVAFVFVFLGTILYNLIMVFSMLLM 120 Query: 126 INVSFRPEVF 135 P +F Sbjct: 121 KYDINPPYLF 130 >UniRef50_C8WXL3 Rod shape-determining protein MreD n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL3_ALIAD Length = 173 Score = 49.1 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 9/162 (5%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + ++ +L + + V P++VL+IL+ L + + G +G I Sbjct: 1 MKAAIAFVTLWIGLILQATLFEIPPMDVIHPDFVLVILVLLALFRGANLAMVFGIAIGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ G +G+ A + AY+ A + F L L M LS V + + L Sbjct: 61 QDVCYGPFIGLNAFAYGLTAYIAAAVFSQFMQKNLAIAFLTTMGLSFVHSWLTYGFMRLF 120 Query: 126 INVSFRPEVFWSS---------VVNGVLWPWIFLLMRKVRQQ 158 S + S+ VV L+P + R++ Sbjct: 121 ELTSDSIQYALSASLQAMIVNGVVALALYPVYRAWFTRPRRR 162 >UniRef50_B9M5R2 Rod shape-determining protein MreD n=6 Tax=Geobacter RepID=B9M5R2_GEOSF Length = 161 Score = 48.3 bits (114), Expect = 8e-05, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 45/127 (35%) Query: 14 LSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGST 73 + + LL + L F PN ++++++Y L F +G + D SG Sbjct: 10 IVIAVLLLQTTVFPYYLLAPFHPNLLVIMVVYLGLRSKSPFGALAAFSLGLLHDCFSGIY 69 Query: 74 LGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPE 133 G+ + I + + + + L V ++V + F+ + Sbjct: 70 FGLNGFSYLCIFHALHKTADRLYTDSRYLMVLTVFFATIVTGLFNMLLLFIFSAANGIYA 129 Query: 134 VFWSSVV 140 SS++ Sbjct: 130 TLLSSLI 136 >UniRef50_C8WAG3 Rod shape-determining protein MreD n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8WAG3_ATOPD Length = 186 Score = 48.3 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 58/161 (36%), Gaps = 5/161 (3%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + R + L+ + +L ++ + N+ L+ L + V GFV Sbjct: 4 SDRNKNVRSITILAVICFILQIVLTPQVSFGGGVINFALIFSAAIALKYGGKTGVVCGFV 63 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 G I DL S + +G+ L + + +Y + + + + +V+L + V + Sbjct: 64 SGLIYDLTSANPIGLMALLLVVSSYFIGQEVRDRISGNFGTSMGLVVLQTFGVTFMYQLI 123 Query: 122 EFLVINVSFRPEVFW-----SSVVNGVLWPWIFLLMRKVRQ 157 L+ + E + + +F ++ ++ Sbjct: 124 NSLIGSGGNFLEGLLFKSFPTMLFTIFAALPVFYVLSHSKR 164 >UniRef50_C0GEW2 Rod shape-determining protein MreD n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEW2_9FIRM Length = 171 Score = 47.5 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 42/125 (33%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + L + L + P+ +L+I++ L + G G + Sbjct: 1 MGQVIIFALFVISLTLQGSVLSLAGPDGVHPDILLVIVVALSLLSDSKRGALVGLAAGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++ G+ LG ++ L L + L+V+ S+ D + F+ + L Sbjct: 61 QDILFGAPLGFFAFTKTLTGALAGLFADEIYKDFVLAPMLLVITFSVFNDGLTFFLQRLF 120 Query: 126 INVSF 130 Sbjct: 121 AIPQP 125 >UniRef50_B1GZB4 Rod shape-determining protein MreD n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZB4_UNCTG Length = 168 Score = 47.5 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Query: 29 DNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLV 88 N+ PN++L+ ++Y L+ GF+ G D+ S G+R + ++I YL Sbjct: 25 INIYGIFPNFILIFVVYLGLSKGIINTQLMGFLFGLTWDVFSTDIFGIRTVMFTVIGYLA 84 Query: 89 ALKYQLFRNLALWQQALVVMLLSLVVDI---IVFWAEFLVINVSFRPEVF---WSSVVNG 142 + F ++ Q +++ + + ++++ N +F + +V Sbjct: 85 GRFCKDFDREKIFTQIVIMFFAGAIYWLGFGLIYFIFLDNGNCAFSFSILSVSSKILVTA 144 Query: 143 VLWPWIFLLMRKV 155 P +F ++ K+ Sbjct: 145 TFAPLVFYILEKM 157 >UniRef50_D1BNE8 Rod shape-determining protein MreD n=3 Tax=Veillonella RepID=D1BNE8_VEIPT Length = 164 Score = 47.1 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 51/140 (36%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + FLI + + + PN +L I++ L R+ + + + G + Sbjct: 1 MMRLALALCGFLIYFIQAQLLPTIFHTNWLPNLILTIIVMITLFKGRRMGLISAVIGGIV 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++ + G+ + I+ YL++ + + +V + +L+ +I + Sbjct: 61 HDVLISNFFGLHLFPYVIVVYLLSAVKHRIYEERWYWSSGIVAICTLLDGVIRSFMILAS 120 Query: 126 INVSFRPEVFWSSVVNGVLW 145 W V+ + W Sbjct: 121 GGDLHFGLYLWHMVLPVMFW 140 >UniRef50_Q0SR40 Rod shape-determining protein MreD n=9 Tax=Clostridium perfringens RepID=Q0SR40_CLOPS Length = 165 Score = 46.7 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 51/136 (37%) Query: 23 QIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMS 82 + ++ P+ + + + L + V G + G + D+ + GV +L Sbjct: 18 NTLVPFFSIKGVYPSLLFTFAVLYALMSGYWEAVFIGVLSGFLQDVYFVNVFGVNMLVNM 77 Query: 83 IIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNG 142 ++ + A + L V LL+++ IV + L+ + + N Sbjct: 78 LVCLIAAYIGESVFKHKKTIPVLSVGLLTIIKFFIVAFILNLINIRINLLSFWIMVLYNV 137 Query: 143 VLWPWIFLLMRKVRQQ 158 V+ +++ + K+ + Sbjct: 138 VIGFFMYNWVYKLCNR 153 >UniRef50_C8WGI8 Rod shape-determining protein MreD n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGI8_EGGLE Length = 175 Score = 46.0 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 10/156 (6%) Query: 7 QGRWVIWLSFLIALLLQIMPWP-DNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + VI + ++ALLLQI+ P L +PN++L +L +A P F +G + Sbjct: 5 REGIVIAVGAVVALLLQIVVAPNIALFSAQPNFLLAYVLVVAIARPLDAGSALPFALGLV 64 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DL+ +G I++++ + + + N L+ + ++ + +++ + Sbjct: 65 CDLLGSGPVGGYAFLFVIVSFIASRAFSVLDNDTLFMPVTIFVVATFAAEMLYGALLIGL 124 Query: 126 INVSFRPEVFWS---------SVVNGVLWPWIFLLM 152 + + F VV VL+P I L+ Sbjct: 125 GLSASPVDAFLYRALPCTLYDCVVGLVLYPIIARLL 160 >UniRef50_A0LSW3 Rod shape-determining protein MreD n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSW3_ACIC1 Length = 171 Score = 46.0 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 52/140 (37%), Gaps = 8/140 (5%) Query: 28 PDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI--SGSTLGVRVLAMSIIA 85 P +L P+ +LL++ W L GFV G + D++ + +G LA ++ Sbjct: 27 PLDLPGAPPSLLLLVVAAWALVTGPSSGAVAGFVAGFVADVVPPADHLIGRYALAACLVG 86 Query: 86 YLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSV-----V 140 YL L ++ V L + ++ + + + +V Sbjct: 87 YLAGLFRLEA-KESVAAALGAVALAVALGTLVFAGSGVIFGEAAGTGGALPVAVASSVGY 145 Query: 141 NGVLWPWIFLLMRKVRQQFA 160 + +L P++ + + ++ Sbjct: 146 DLLLTPFVVPPITSLVRRLQ 165 >UniRef50_B9CK75 Rod shape-determining protein MreD n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CK75_9ACTN Length = 186 Score = 46.0 bits (108), Expect = 5e-04, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 55/141 (39%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 +++L+ + +L + L+ N+ + + L++ R GF+ G DL S Sbjct: 13 IVFLAIVCLVLQLALAPNIALLQGHANFACIFAMLIALSIGGRTGTICGFIAGIFYDLSS 72 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 S +G+ L +++++Y++ + + + + + V + ++ + Sbjct: 73 TSPIGLMALLLTVMSYILGREVRNRLSGNFGSSVGKIAISVTAVSVAQQVFSSILGQTTN 132 Query: 131 RPEVFWSSVVNGVLWPWIFLL 151 E ++ +F L Sbjct: 133 LMEALGFIAFPTIILTVVFSL 153 >UniRef50_UPI0001C15A7A conserved hypothetical protein n=2 Tax=Nostocaceae RepID=UPI0001C15A7A Length = 212 Score = 45.6 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 2/128 (1%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 + + L L+ L+ PNW L+ L+ W + P V G + Sbjct: 35 SRQGLNWVIIFISVLLCLLMSPTRFLGMELLGIAPNWALIWLVAWSVKRPAISGVFAGII 94 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQ-LFRNLALWQQALVVMLLSLVVDIIVFW 120 MG + D ++ ++++I+ L + + F AL+V ++ L+ + + Sbjct: 95 MGLLQDALTSPHP-SHTVSLAIVGILTSRLQKHRFIQEDFISIALIVFIMVLISNTVFVV 153 Query: 121 AEFLVINV 128 F N Sbjct: 154 QLFFTNNS 161 >UniRef50_Q2JDQ1 Rod shape-determining protein n=3 Tax=Frankia RepID=Q2JDQ1_FRASC Length = 180 Score = 45.6 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 35/95 (36%), Gaps = 1/95 (1%) Query: 37 NWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFR 96 + +L++L L + GFV G + DL S LG L + +I Y V L Sbjct: 45 DLMLVLLAAIALIEGPLLGAVAGFVAGLLADLSSSHVLGQTALVLCLIGYAVGLAMDAAE 104 Query: 97 NLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 ++ + S++ + ++ + Sbjct: 105 R-SVVVPLAAIGGASVLGTLGYAATTSILGEAALT 138 >UniRef50_Q2JIW7 Rod shape-determining protein MreD n=2 Tax=Synechococcus RepID=Q2JIW7_SYNJB Length = 214 Score = 45.6 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 6/118 (5%) Query: 13 WLSFLIALLLQIMPW----PDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 ++ L LL + PW L P+W L+ ++ W + G +G + D Sbjct: 16 VVTALSGLLAAVAPWWRGPGLELAGLTPDWPLIWVVCWSVRRKAWQGAVAGVTLGFLQDA 75 Query: 69 ISGSTLGVRVLAMSIIAYLVALKY-QLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 ++ S L ++++ L A Q + AL+V + ++ + ++ + Sbjct: 76 LT-SPCPTHALGLAVVGILTAKLQKQRYMQEDFISVALIVFGMVVIAETLMALQWMWL 132 >UniRef50_C7Q8C4 Rod shape-determining protein MreD n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q8C4_CATAD Length = 193 Score = 45.6 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 6/153 (3%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI- 69 +I L+ + L + P+ ++ ++ A R + GF++G D+ Sbjct: 9 MICGLTLVLAAQDALLSAVRLPLAAPDLLMAVVAATGFARGPRTGLVVGFLLGLAADVSP 68 Query: 70 -SGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINV 128 + +G + + + YL + + LVV L+ + + V Sbjct: 69 PAAHAVGSQAFVLCLAGYLAGRTAGAV-QGTVLRPILVVACLAALSPFLYAGLAGAVGTA 127 Query: 129 SFR---PEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 F S++ GVL P++ ++ V + Sbjct: 128 DFHGLPAAAAASALYTGVLAPFVIPVVSFVLTR 160 >UniRef50_A9KL02 Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KL02_CLOPH Length = 169 Score = 45.6 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 50/155 (32%), Gaps = 4/155 (2%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 + + + LL + L P+ +L++++ + TG V G +L Sbjct: 3 RVLVTLIQILICFLLQSAVFPTFKLAGVVPDLLLVLVVTVAYTRGIFSGMFTGLVCGLLL 62 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVV----MLLSLVVDIIVFWAE 122 D G +G+ + + Y +++ L++ + + F Sbjct: 63 DCSIGDVIGIYGILYMFLGYFNGYANKIYDKEDYTIPVLLITASEFVYCFFYYVAEFLLR 122 Query: 123 FLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 + + + V+ VL +F + + Sbjct: 123 GRLNLGFYAYRIMLPRVIYTVLVGIVFYKLFHMIH 157 >UniRef50_B3E5W6 Rod shape-determining protein MreD n=1 Tax=Geobacter lovleyi SZ RepID=B3E5W6_GEOLS Length = 162 Score = 44.8 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 52/132 (39%) Query: 13 WLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGS 72 L + LL + L +++P+ +L+++++ L P ++ + +G + D +SG Sbjct: 9 ALVLGVVLLQTSVLPQYLLSLYKPDLLLILMVFLALRAPVSTSLPAAYGLGLLKDCLSGL 68 Query: 73 TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP 132 LG+ + ++ ++ L V L + +I + + Sbjct: 69 YLGLNAFSFLLVYLVLKTLSDRLYVQNALLLVLTVSLSTFATMLINALLLSIFSEAAGIF 128 Query: 133 EVFWSSVVNGVL 144 ++++ +L Sbjct: 129 SSLMAALIPHLL 140 >UniRef50_A5I680 Rod shape determining protein n=14 Tax=Clostridium RepID=A5I680_CLOBH Length = 166 Score = 44.8 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 15/136 (11%), Positives = 49/136 (36%) Query: 23 QIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMS 82 + + P+ + + ++ + + + G G + DL + G+ L Sbjct: 22 NSLMPFVAIKGVYPSLLFVFIVSYSIIKDKWEAIWIGIFAGMLQDLYFANVFGINSLINM 81 Query: 83 IIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNG 142 + + A + + LS+ + ++ + + + ++S+ NG Sbjct: 82 FVCLIAAEIGVNIIKSKILIPVISSFALSIFKGVFIWVIAYFLKINISYSLIAFNSIYNG 141 Query: 143 VLWPWIFLLMRKVRQQ 158 V+ ++ L+ + ++ Sbjct: 142 VITIIVYKLVYNLCRK 157 >UniRef50_B8CY02 Putative uncharacterized protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CY02_HALOH Length = 161 Score = 44.4 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 36/104 (34%) Query: 37 NWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFR 96 + L+ ++ L + TGF+ G I DL G G + I+ L L + F Sbjct: 29 DLFLVTIIVMGLIKGSKAGAWTGFIGGNIQDLFLGGMFGTYTIVKLIMGGLSGLLEKEFF 88 Query: 97 NLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 + + S+ ++V ++ +++ Sbjct: 89 KENPVVPVATIFIASIFHGLLVILITEELLFNINLFTALRQTIL 132 >UniRef50_B7GIQ3 Cell shape-determining protein n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GIQ3_ANOFW Length = 174 Score = 44.4 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 51/138 (36%), Gaps = 1/138 (0%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 M + ++ + ++ + P +L+ +++ + + + GF Sbjct: 1 MNRLFLPFLVTVMFLLESIIVQLLSQPLFDVYLLVPRMLLVFIVFITIFIGQTEGMTYGF 60 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 + G + D+ LG A S+IAYL+A + W + ++ V+ + Sbjct: 61 IFGLLYDVAYTELLGAYAFAFSLIAYLIAKAMN-VFHKNAWTASFFAIVAIACVEWYAYA 119 Query: 121 AEFLVINVSFRPEVFWSS 138 + ++ + + F + Sbjct: 120 IQLVIGGTTMSVQTFLQA 137 >UniRef50_D2PTR4 Rod shape-determining protein MreD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PTR4_9ACTO Length = 177 Score = 44.0 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 59/162 (36%), Gaps = 13/162 (8%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 + L + + + + VL++++ LA TGF G +L Sbjct: 5 RYGLAALFLILAVTVQTSILPHLAVAGVTCDLVLIVVVGLALARGPEWGAITGFAGGLLL 64 Query: 67 DLI--SGSTLGVRVLAMSIIAYLVALKYQLFRNLAL--WQQALVVMLLSLVVDIIVFWAE 122 D++ + T G LA+++ YL + + + A V+L + + ++ Sbjct: 65 DIVPPADHTAGRWALALALSGYLAGMIRREASAAPVGPVGAAGTVVLSAALSLLVYSATG 124 Query: 123 FLVINVSFRPEVF---------WSSVVNGVLWPWIFLLMRKV 155 ++ + + F + V V+ P + MR++ Sbjct: 125 AVLHDPTVDWSQFGVRLGIAAGYDVVAAIVVIPLVLWTMRRL 166 >UniRef50_O33621 MreD protein n=3 Tax=Streptomyces RepID=O33621_STRCO Length = 223 Score = 43.7 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 8/118 (6%) Query: 49 ALPHRVNVGTGFVMGAILDLI--SGSTLGVRVLAMSIIAYLVALKYQ---LFRN--LALW 101 H GF G + DL + G L + +I YL L R+ + Sbjct: 47 VYGHVGGALVGFGAGLLADLAPPADHAAGRYALVLCVIGYLAGLARPDNGRLRSATGPMV 106 Query: 102 QQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFW-SSVVNGVLWPWIFLLMRKVRQQ 158 + +L+ + P + + +++ + +L P++ + + ++ Sbjct: 107 VVVAAAVGTTLLYAGVGALVGDTAARHVGLPSLLFTAALYDLLLAPFVVPGIMALARR 164 >UniRef50_B0AA33 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA33_9CLOT Length = 160 Score = 43.7 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 43/116 (37%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L F I +L + ++ N VL+ L+ L L + G V+G I Sbjct: 1 MKKILLCILGFFIIILQNSIINYLSVFGMTINIVLIYLVIISLYLDELESGIIGAVLGII 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 LD G G L +AY+V+ + +++ + + + F Sbjct: 61 LDSSVGGLFGSNGLIFFGVAYMVSYIKDKVYKESPIMIFTIILGATFIYCGLSFLL 116 >UniRef50_Q18B09 Putative membrane protein n=4 Tax=Clostridium difficile RepID=Q18B09_CLOD6 Length = 162 Score = 43.7 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 56/157 (35%), Gaps = 3/157 (1%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L ++ + + ++ N VL+ + L L ++G I Sbjct: 1 MKKVLLCLLGIVLMTIENSITNYIDIFGISFNLVLIYVTIISLYLDELEGGIIAVIIGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D+ G GV L + IIAY + + +++ + SL+ I+ ++ Sbjct: 61 KDITVGGIFGVNALILFIIAYAIGYMRDQLYKGSYIITFVLIFIGSLIDSIVNIGTSSII 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 +F ++ P + L+ V + + + Sbjct: 121 YQSYNISTLFVK---GLLVAPIVNSLIGLVIYRLSKR 154 >UniRef50_UPI0000E87A9D hypothetical protein MB2181_01455 n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87A9D Length = 162 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 55/140 (39%), Gaps = 1/140 (0%) Query: 16 FLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLG 75 FL+ LL + P P++++ + +L + + T F G I D++ G +G Sbjct: 19 FLLTLLFSQINIPFISSGSLPDYLVAWSVGVMLLNNKQYGILTIFFAGLIADILIGQIIG 78 Query: 76 VRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVF 135 I+ Y + Q + ++Q + ++ ++V ++ +F Sbjct: 79 QYAFTF-ILTYAILFFIQKMFAIQSYKQRTITGIILVIVALLTTNITSTTYQTNFHETSI 137 Query: 136 WSSVVNGVLWPWIFLLMRKV 155 ++ ++ ++ L+ + Sbjct: 138 VLKLITTIITFLVYQLIIYI 157 >UniRef50_B3T1Z2 Putative rod shape-determining protein MreD n=1 Tax=uncultured marine microorganism HF4000_133G03 RepID=B3T1Z2_9ZZZZ Length = 168 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 51/112 (45%) Query: 41 LILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLAL 100 +++ YW+L P + G F+ G I D++ G +G+ L + IIA + A + +L Sbjct: 44 ILIYYWVLKQPQVLGYGFIFLSGIITDVVFGLPIGISALTLLIIASVAAYVRAVTVRPSL 103 Query: 101 WQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLM 152 + + L+ + I F + F +S+ + +P+++++ Sbjct: 104 LYDWMSFIPALLIANFIYFIVLYFSNYSIDYLYFFKNSIFTFLFYPFLWVIF 155 >UniRef50_D1VM57 Rod shape-determining protein MreD n=1 Tax=Frankia sp. EuI1c RepID=D1VM57_9ACTO Length = 182 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Query: 2 ASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 ++ + ++ ++ +P P P+ VL++L L L GFV Sbjct: 18 PTFAAVTFVLLVAVIAQVSVIARLPLPGGG----PDLVLMLLATAALVLGPVNGAVLGFV 73 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALK 91 G DL+S LG L ++ YLV L Sbjct: 74 TGLFGDLLSTHVLGQTTLVFLLVGYLVGLV 103 >UniRef50_A8TM61 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM61_9PROT Length = 169 Score = 42.9 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 61/148 (41%), Gaps = 1/148 (0%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 I L+ L+A+L + P + + YW + P F++G + D+++ Sbjct: 19 IALTVLLAILSVVPIGVPGYATVVPAYTAMAAFYWAVFRPDLQPPFALFLVGVLQDILAA 78 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE-FLVINVSF 130 + LG+ L++ ++ L + + F L +L+ + ++++ LV+ Sbjct: 79 TPLGMTALSLMVVHGLALSQRRAFLGKPFALAWLGFLLIHGLSALLIWLLASMLVLQPIG 138 Query: 131 RPEVFWSSVVNGVLWPWIFLLMRKVRQQ 158 + +V L+P + + ++ + Sbjct: 139 PEPAVFQYLVTVTLFPLVAWIFVRMHRY 166 >UniRef50_A1AS30 Rod shape-determining protein MreD, putative n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AS30_PELPD Length = 164 Score = 42.9 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 54/141 (38%) Query: 4 YRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMG 63 + + + +L + + +F+P+ +L+I++ L + + + +++G Sbjct: 2 NHRGALILFFSTLTAIVLQSSLLPLYLVEMFKPDLLLIIMVVLALRVSYGTGMPLAWLLG 61 Query: 64 AILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEF 123 + D+ SG LG+ + II L+ + + V +LV ++ Sbjct: 62 MVKDVFSGLYLGLNGFSFLIIFLLIKSVADRLYTESGLLFVMTVSGATLVCMLVNLLLLV 121 Query: 124 LVINVSFRPEVFWSSVVNGVL 144 ++ + S + +L Sbjct: 122 MLTDSPNLLYTMASGLFPHLL 142 >UniRef50_C2HJU1 Cell-shape determining protein n=2 Tax=Finegoldia magna RepID=C2HJU1_PEPMA Length = 163 Score = 42.5 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 50/146 (34%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + L ++ + ++ N + I++ + G ++G I Sbjct: 1 MNKLKIFLIVLLDIIIQATLLSRISVFNVYTNISIPIVVLLSIGFGAYTGSLNGMIIGLI 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D I +GVR L +L+ ++ ++L ++ ++ ++ Sbjct: 61 EDAIFSPVIGVRALIYFTSGFLIGNSEAGINKEDPRSGMILTFFVTLYYTLVHYFVLYIT 120 Query: 126 INVSFRPEVFWSSVVNGVLWPWIFLL 151 N + + ++ +L ++ + Sbjct: 121 GNGFNKSYLKGPILIEMILNVLLYYV 146 >UniRef50_C1XP36 Rod shape-determining protein MreD n=2 Tax=Meiothermus RepID=C1XP36_9DEIN Length = 159 Score = 42.5 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 40/130 (30%) Query: 12 IWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 I L LL ++ V P+ L L + + F +G ++DL + Sbjct: 4 ILLLAFTFLLQSLISGLLPGWVSPPDLPFLATLAIAARVSPYAGLVIAFAVGLLMDLSAA 63 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 G+ V+ + Y+ + F Q V+ L + + + F Sbjct: 64 GYPGLNVVGYLLGTYVFYRLSRAFHWDEPLGQFAVLAGSLLTKWLGYLLMVYWLRGEPFG 123 Query: 132 PEVFWSSVVN 141 V+ Sbjct: 124 FLSITPVFVS 133 >UniRef50_Q67SI4 Rod shape-determining protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67SI4_SYMTH Length = 171 Score = 42.5 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 53/129 (41%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + + ++ + L+ ++ + PN V ++ + L +V +G GF G + Sbjct: 1 MRYWVLTAITLVAYLVESVLGPFLAIGGVAPNVVFVVAVSCGLLFGWQVGLGVGFGGGLL 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 +DL G +G LA S++ ++ + + L + ++ S+V +V + L Sbjct: 61 IDLTIGQLIGSHALAGSLVGFIAGVVEERVFKDNLLLPLIGGLVGSVVGQAVVLASLLLF 120 Query: 126 INVSFRPEV 134 E+ Sbjct: 121 GRHVPLAEL 129 >UniRef50_B6ITQ9 Putative uncharacterized protein n=1 Tax=Rhodospirillum centenum SW RepID=B6ITQ9_RHOCS Length = 173 Score = 42.5 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 54/126 (42%), Gaps = 3/126 (2%) Query: 36 PNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 P +L+ ++YW + P + F++G + DL+ G+ LG+ L + AY + L + F Sbjct: 43 PPLMLMAVVYWAIHRPDLLRPTLVFLLGVLNDLLGGAPLGMTALVFVL-AYWLLLTQRRF 101 Query: 96 RNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP--EVFWSSVVNGVLWPWIFLLMR 153 + + + + V WA + ++ + ++ ++P ++ Sbjct: 102 FLGNSFLLLWIGFTMVALGAAAVQWAVYSLMAAELLTFRAAGFQVMLATAVFPLAAWVLM 161 Query: 154 KVRQQF 159 ++ + F Sbjct: 162 RLHRAF 167 >UniRef50_A7VRP8 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRP8_9CLOT Length = 172 Score = 42.5 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 51/134 (38%) Query: 15 SFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTL 74 L+ +L ++ +L+ RP ++ + + ++ +G G G ++D+ GS + Sbjct: 17 IILLFILQELPYLMPSLLGVRPLLLIAAPMTIAILENEKIGLGFGVFAGLLMDMGYGSVI 76 Query: 75 GVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEV 134 G + + ++ + + L + L V + F +L+ Sbjct: 77 GFHAIVLGVLGFFIGLLAVNLVKTNVLTSLLCTAAAVFAVISLHFVFFYLLRGYDMASYA 136 Query: 135 FWSSVVNGVLWPWI 148 + + +L+ ++ Sbjct: 137 YQKYYLPMMLYSFL 150 >UniRef50_A8SMQ0 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMQ0_9FIRM Length = 165 Score = 42.5 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 58/149 (38%), Gaps = 3/149 (2%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 V+ + F ++ + ++ + N L +++ + ++ +G V+G Sbjct: 1 MNRLKVVLMFFASIMIQTAILPNFSIFNSKANMSLAVVVAIAMNFGSYISGYSGIVLGFF 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D++ +G+R L +I ++V + +++ ++ +L ++ + Sbjct: 61 EDILFSRVIGIRALIYYMIGFIVGYNEDSINKGDIRSGSIITVVSTLFYWVMNTIIYMFL 120 Query: 126 ---INVSFRPEVFWSSVVNGVLWPWIFLL 151 + F + ++ +L ++L+ Sbjct: 121 ENSSSARFIKYLKGPIIIEMLLNVLLYLI 149 >UniRef50_A4U0U0 Cell shape-determining protein n=3 Tax=Magnetospirillum RepID=A4U0U0_9PROT Length = 171 Score = 42.5 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 57/155 (36%), Gaps = 3/155 (1%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 + + ++ ++ LL I L P L+ + YW + P + + F++G + Sbjct: 14 RHLVPVGVTLMLLLLTAIPTRIPGLSGIIPMLPLMGVYYWAIYRPDLLPAWSAFLIGLLY 73 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAE--FL 124 D+I G+ LGV L + + +A + F + A L W L Sbjct: 74 DIIGGTPLGVNALVL-LSVQGIAAGQRRFFLGKSFMVAWWAFGLLAAAAAGATWLLVTIL 132 Query: 125 VINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 V + ++ L+P + + + + F Sbjct: 133 YGQALDASPVIFDYLLTMGLFPLLTWTLARTQMAF 167 >UniRef50_B7K607 Rod shape-determining protein MreD n=3 Tax=Cyanobacteria RepID=B7K607_CYAP8 Length = 181 Score = 41.7 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 66/159 (41%), Gaps = 8/159 (5%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDN-LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 R VI S ++ LLL P L+ NWVL+ ++ W L + G V+G I Sbjct: 10 VNRLVIAGSVILCLLLSPTRLPGMELLGVGTNWVLIWVVVWSLKRSVFQGITAGLVLGLI 69 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKY-QLFRNLALWQQALVVMLLSLVVDIIVFWAEFL 124 D ++G+ V ++ ++ +L A Q + AL+ + +V + I +++ Sbjct: 70 QDGLTGAYP-SHVFSLVVVGFLTAKLQKQRYIQEDFISVALITFAMVIVAESITAG-QYI 127 Query: 125 VINVSFRPEVFWS----SVVNGVLWPWIFLLMRKVRQQF 159 + N+ E++ + + +L ++ + Sbjct: 128 LANIRPLEEIWLDYQRFVLSSAILSSLWAPVLYYPLNSW 166 >UniRef50_B6GBQ7 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBQ7_9ACTN Length = 188 Score = 41.7 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 52/126 (41%) Query: 1 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF 60 + + I A+L + +L R N++L++ ++ R V GF Sbjct: 5 LNNSGRTRSAFIATIVACAVLQVALAPQISLFGGRFNFMLVLTASLAISGDSRALVYIGF 64 Query: 61 VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW 120 G DL + S +G L ++++ Y VAL + + Q VV+L + V+++ Sbjct: 65 FSGLFYDLTTTSPVGFMALLLAVMGYAVALMSRGLSSGLGMQTVRVVVLAVIAVNVLYGL 124 Query: 121 AEFLVI 126 F + Sbjct: 125 GLFFMG 130 >UniRef50_A1SMC8 Rod shape-determining protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SMC8_NOCSJ Length = 170 Score = 41.3 bits (96), Expect = 0.012, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 3/117 (2%) Query: 25 MPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLI--SGSTLGVRVLAMS 82 + PN LL+++ L + GF G LDL + G LA+ Sbjct: 23 VFPHLAWDGIVPNLCLLVVVGAALTQGSSFAMVLGFGAGVALDLAPPADHVAGRWALALV 82 Query: 83 IIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSV 139 ++AY+ Q R ++ V S + + + ++ + + + Sbjct: 83 LVAYVAGRVRQGARP-SVGTVVATVAASSFLGTSVFALSGLVLDDPALGIPELLEVI 138 >UniRef50_A7NJU4 Putative uncharacterized protein n=2 Tax=Roseiflexus RepID=A7NJU4_ROSCS Length = 179 Score = 41.0 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 32/104 (30%) Query: 37 NWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFR 96 N +LL+ + + L F G LDL + + G+ LA+ Sbjct: 43 NLLLLLTICYGLIAGTTSAARWAFYGGLALDLCAMTLFGLHALALLAGTVGATQALLRLS 102 Query: 97 NLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVV 140 + V L S++ + L++ ++ Sbjct: 103 RDNWLVPVVGVALGSVIYHGVYALLSALLVAPLDLQGYALYVLL 146 >UniRef50_C1A3X6 Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3X6_GEMAT Length = 170 Score = 41.0 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 1/151 (0%) Query: 13 WLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGS 72 W+ F + + P ++ L+ +L+ + + + TGF++G LD ++ Sbjct: 18 WIGFALLMAAHFGVRPLVAGRVEVDFALIAILFSAVRMRPGLAAITGFLVGISLDAMAPG 77 Query: 73 TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP 132 T G LA+++IAY A +F + L V V DI + + +S Sbjct: 78 TFGSHALALTLIAYGAAWLKAVFFADHVGLTGLFVFAGKWVFDIALALLTGVSSGISLVI 137 Query: 133 EVF-WSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + WS + + LL+ R + Q Sbjct: 138 ALLVWSPLSAALTALVAMLLLVMFRPLYRPQ 168 >UniRef50_C9LL35 Rod shape-determining protein MreD n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL35_9FIRM Length = 163 Score = 40.6 bits (94), Expect = 0.018, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 47/131 (35%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 +I L ++L + + +P+ L+ ++ + P + V G + Sbjct: 1 MNKELLIGLCIFFSILQGSVIPFFFDGISQPDLWLVFIIISAMVFPVKYAYVLSIVGGLV 60 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 DLI G+ G+ +LA +I ++ + N + + V++ SL I ++ Sbjct: 61 QDLIIGNFFGLHLLAYIVITFIFVKFVKGKYNRNWYVSVISVIVGSLAFMGISTLVMWIA 120 Query: 126 INVSFRPEVFW 136 Sbjct: 121 GVPLVSFLYLL 131 >UniRef50_A8YBX0 Similar to tr|Q3MD54|Q3MD54_ANAVT Hypothetical protein n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YBX0_MICAE Length = 178 Score = 40.6 bits (94), Expect = 0.018, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 73/162 (45%), Gaps = 10/162 (6%) Query: 8 GRWVIWLSFLIALLLQIMPWPDN-LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 V S L+ L ++ P ++ PNW+L+ L+ W L +V G +GAI Sbjct: 16 NILVTIASLLLCTFLSLIRLPGMEILGIAPNWLLIWLVSWSLNRSCLDSVVAGLAIGAIQ 75 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKY-QLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D ++ + ++ +I +L + + Q + L L+V +++L+ D + + +L Sbjct: 76 DSLTSNYP-SHIMVFGLIGFLTSRLHRQRYVKEELIAVVLIVFVMTLIADGAIAFQYYLQ 134 Query: 126 INVSFRPEVF-------WSSVVNGVLWPWIFLLMRKVRQQFA 160 + F S++++ + P ++ +++ +QF+ Sbjct: 135 GGKNLADLWFDYQRIGLTSALLSSLWTPLLYYPLQQWWRQFS 176 >UniRef50_A3JW84 Sensor protein n=2 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JW84_9RHOB Length = 1521 Score = 40.6 bits (94), Expect = 0.018, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 1 MASYRSQGRWVIWLSFL--IALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGT 58 M + L FL + L + + +VF +V++ L L VG Sbjct: 1 MTDNVKKIIAFFLLGFLSLVGNALNVELFFGARLVFSSVFVIIAL----FTLGPWYGVGV 56 Query: 59 GFVMGAILDLISGSTLGVRVLAMSI----IAYLVALKYQLFRNLALW---QQALVVMLLS 111 F G ++ A I + +L RN +L ++ + Sbjct: 57 AFFGGLYTIVLW-----QHPFAFIIYVAEAVFFAFTASRLNRNTSLIAWDFVFWAIIGIP 111 Query: 112 LVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 L ++F + + F ++ NG++ I L+ + +++ Sbjct: 112 L--TFVLFSIFLELSFSTIALIAFKETL-NGLINVLIASLLLILGRKY 156 >UniRef50_D0WFR0 Rod shape-determining protein MreD n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WFR0_9ACTN Length = 182 Score = 40.6 bits (94), Expect = 0.019, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 48/124 (38%) Query: 6 SQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAI 65 + +I + +L + ++ +PN++L+ ++ L FV+G Sbjct: 2 RENLGLIIGGIVALILQVALAPNVAILGAQPNFILVFIVAASLFNRGDAVTVLAFVLGLA 61 Query: 66 LDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D +S G+ + + ++ + + L N + +V M+ + +V+ A L+ Sbjct: 62 SDALSTHPFGLMAGILLLATFVSSRAFALLDNDSPIVPVVVSMVCAALVECAYAVAYVLL 121 Query: 126 INVS 129 Sbjct: 122 GADL 125 >UniRef50_A0ZBN2 Putative uncharacterized protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZBN2_NODSP Length = 148 Score = 40.6 bits (94), Expect = 0.020, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 56/143 (39%), Gaps = 9/143 (6%) Query: 21 LLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLA 80 +L L+ PNW+L+ ++ W + + G V+G + D ++ + Sbjct: 1 MLPTRFLGMELLGIGPNWLLIWVVAWSVKRSVWEGIFAGIVLGLLQDAMTSPHP-THAIT 59 Query: 81 MSIIAYLVALKY-QLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINV-------SFRP 132 + + L AL Q F AL+V ++++V + I L+ ++ Sbjct: 60 LGFVGLLTALLQKQRFIQEDFISIALIVFVMAIVAETIFGLQLSLIGGREVEDIWAYYQR 119 Query: 133 EVFWSSVVNGVLWPWIFLLMRKV 155 S++++ + P ++ + Sbjct: 120 GALASAILSSLWAPVVYYPLNLW 142 >UniRef50_B2KEI3 Putative uncharacterized protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEI3_ELUMP Length = 161 Score = 40.6 bits (94), Expect = 0.021, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 58/148 (39%), Gaps = 3/148 (2%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 +I + + +++ + N++ ++ F G LD Sbjct: 7 LIIVFLISSVIHWALVSFGANYNIAVNFMFVVAAAVCALYNKWHGYTLAFFAGLFLDFFG 66 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 + G L ++ + ++ L + F ++ Q +++ +LS+ + ++ + + + Sbjct: 67 VNLFGAYALTFTVCSGIMYLAKKSFALDSVPTQIVLIFILSIFSVLFYNFSGIIFLKGTA 126 Query: 131 RPEV---FWSSVVNGVLWPWIFLLMRKV 155 F +++N ++ P +F++ + + Sbjct: 127 WHGFKSLFLGALINALIAPCVFMVFKTL 154 >UniRef50_C7N6A7 Rod shape-determining protein MreD n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6A7_SLAHD Length = 175 Score = 40.2 bits (93), Expect = 0.021, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 56/127 (44%) Query: 11 VIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLIS 70 +I + + +L ++ ++ +PN +++ ++ + +V F+MG DL Sbjct: 7 IIIGALISIVLQIVVSPNISIFGAQPNIIMVYVVVVSMLRSDNRSVWLAFIMGLAYDLFC 66 Query: 71 GSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSF 130 LG+ + I +++ + ++ F N L +V +L ++ V+I++ A + + Sbjct: 67 NGHLGLTAALLLIASFVSSKAFEAFNNDTLLIPMVVSILTAMFVEIVMAMAYTALSSDVS 126 Query: 131 RPEVFWS 137 + Sbjct: 127 LLDALIQ 133 >UniRef50_B0C8J4 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8J4_ACAM1 Length = 185 Score = 40.2 bits (93), Expect = 0.025, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 60/161 (37%), Gaps = 9/161 (5%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 V+ + AL+L L PNW+L+ ++ W + + G +G I Sbjct: 19 NAAIVVGSVMICALMLLFRLPVMVLSGVGPNWLLVWVVTWSIKRSSLQGIVAGICLGLIQ 78 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKY-QLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D ++ + + ++++ L + F AL+V ++L+V+ + L Sbjct: 79 DGLTAAQP-THTVGLALVGLLTGRINKKRFIQEDFISIALIVFGMALMVEAVAAIQFGLG 137 Query: 126 INV-------SFRPEVFWSSVVNGVLWPWIFLLMRKVRQQF 159 R S +++ + P ++ + + ++ Sbjct: 138 GTHRLEDVWLHLRQTALSSGILSSLWAPVVYFPLNRWWTRY 178 >UniRef50_B8G7R9 Rod shape-determining protein MreD n=3 Tax=Chloroflexus RepID=B8G7R9_CHLAD Length = 176 Score = 39.4 bits (91), Expect = 0.040, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%) Query: 55 NVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVV 114 + F G LD++ LG +A I +V+L + F + V + +++ Sbjct: 69 GLWWAFYGGLALDVLGTLPLGSHAVAQLIATVVVSLFARRFALERPLVPLVAVAVGTVIY 128 Query: 115 DIIVFWAEF 123 ++I+F F Sbjct: 129 EVILFAITF 137 >UniRef50_D2RM78 Rod shape-determining protein MreD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RM78_ACIFE Length = 170 Score = 39.4 bits (91), Expect = 0.044, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 59/132 (44%), Gaps = 5/132 (3%) Query: 36 PNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLF 95 P+ +LL LL + + R G +GA+LD+++ S G +++ ++I YLV Sbjct: 32 PDLLLLFLLLYAMDQGKRNGAVYGLGIGALLDVVTFSYFGWHMVSRTVIGYLVGKNRVNM 91 Query: 96 RNLALWQQALVVMLLSLVVDIIV-FWAEFLVINVSFRPEVFWSSVVNG----VLWPWIFL 150 L ++ L++L++ + + ++ + ++ VL P ++ Sbjct: 92 FVDRLPTYLILTTLVTLLLQVARGLFLCIMLGRWLPLWPLTLQTLKTMGWNLVLAPVMWF 151 Query: 151 LMRKVRQQFAVQ 162 L +++++ + Sbjct: 152 LYHRLKKRVRSR 163 >UniRef50_Q2G6F4 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G6F4_NOVAD Length = 184 Score = 39.4 bits (91), Expect = 0.045, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 1/145 (0%) Query: 13 WLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGS 72 WL+ ++A + P P ++LL W + P + V G +G + DL SG Sbjct: 32 WLTIMLASMASFSPV-IASAPVMPPLAYMMLLAWRMLRPGMLPVWAGLPLGFVDDLYSGQ 90 Query: 73 TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP 132 G ++ S + + + F Q L +L+ ++ L Sbjct: 91 PFGSGIVLWSATMLAMEIIDERFLWRGFIQDWLTASVLTTAYLVLCSAIAGLATRYPLPI 150 Query: 133 EVFWSSVVNGVLWPWIFLLMRKVRQ 157 + +++ VL+P + L+ + + Sbjct: 151 VIVPQLLLSLVLYPVVTGLVAMLDR 175 >UniRef50_Q2RX68 Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RX68_RHORT Length = 184 Score = 39.0 bits (90), Expect = 0.049, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 1/130 (0%) Query: 29 DNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLV 88 + P L+ + YW + P + G+ FV+G + D ++G+ LGV L + + +V Sbjct: 49 PGFVHIAPMIALISIYYWAVCRPEVMGYGSAFVLGLVEDSLTGAPLGVGALVLLLTQAVV 108 Query: 89 ALKYQLFRNLALWQQALVVMLLSLVVDIIVFW-AEFLVINVSFRPEVFWSSVVNGVLWPW 147 A +Y+ F N L++ V ++ + + + +S++ ++P Sbjct: 109 ATQYKFFLNKPFLVTWWAFALVAGVAAVVKWLAVSAIYGTFVDGTALVFSTLFTVAVYPP 168 Query: 148 IFLLMRKVRQ 157 L +V Sbjct: 169 FAWLFGRVHH 178 >UniRef50_A4IRD6 Cell-shape determining protein MreD n=9 Tax=Geobacillus RepID=A4IRD6_GEOTN Length = 172 Score = 39.0 bits (90), Expect = 0.053, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 34 FRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQ 93 F P + L+ L+ + L +G GF+ G + D I LGV A ++IAY+ + Sbjct: 35 FVPRFFLVFLVLMAVYLGGTRAMGYGFIFGFLYDCIYTELLGVNAFAYTLIAYIAGKATK 94 Query: 94 LFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFW 136 F + L+ +L ++D V+ + L+ + VFW Sbjct: 95 WFHQ-SWAVAFLLSVLAIALLDSYVYGIQLLIGRTDWSFSVFW 136 >UniRef50_B9L228 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L228_THERP Length = 162 Score = 39.0 bits (90), Expect = 0.055, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 54/152 (35%), Gaps = 4/152 (2%) Query: 10 WVIWLSFLIALLLQIMPWPD-NLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 +I + A L+++ P P+ VL ++L R + G LDL Sbjct: 4 IMITIFLFGAAALEVLVLPRVTPFGLFPDLVLGVVLVASALEGMRAGFLWAAMGGLALDL 63 Query: 69 ISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINV 128 ++ S LG LA+ Q AL +V L+L I+ + + Sbjct: 64 LAASPLGGHFLALVPAVLAGTAARQSIYRSALLPLMGIVGGLTLGYRAILLFVHWPARWE 123 Query: 129 SF---RPEVFWSSVVNGVLWPWIFLLMRKVRQ 157 ++ ++N + P ++ ++ + Sbjct: 124 AWLDAGVTAMLVGILNLIAVPLVYGIVLLAGR 155 >UniRef50_Q0AN30 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0AN30_MARMM Length = 173 Score = 38.6 bits (89), Expect = 0.064, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 2/137 (1%) Query: 13 WLSFLIALLLQIMPW-PDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISG 71 S L+AL++Q P + + P W L+ + W P + F +G DL++G Sbjct: 18 IASVLVALIVQASPTRLVDGLTIMPTWTLMAIFLWSGVRPQFMPPIAVFAIGLTQDLLTG 77 Query: 72 STLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFR 131 + +GV L+ + + + + L L L+ I F A + Sbjct: 78 APMGVWALSYLVAISVFRFRGEDGMPRDLPPVLLRFGATLLLAHAIAFAAGSFALEQLAD 137 Query: 132 PEVF-WSSVVNGVLWPW 147 + V + +++P Sbjct: 138 FQPLAIEVVASILMFPL 154 >UniRef50_A7HW07 Rod shape-determining protein MreD n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HW07_PARL1 Length = 177 Score = 38.6 bits (89), Expect = 0.064, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 2/146 (1%) Query: 17 LIALLLQIMPWPDNL-IVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLG 75 L +LL +P + P + L+ + YW + P F +G I DL+SG +G Sbjct: 29 LACVLLSFVPLGRIVGSPLTPAFPLMAIYYWAIVRPEMFPPLAVFTVGLIFDLLSGGAIG 88 Query: 76 VRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVF 135 + ++ Y V + ++ A + + L++ + W + + F P Sbjct: 89 LWAFVY-VVTYAVVISQRMLVMNAPFSVFWIGFLVAAAFAGALAWGVVSISHGMFVPLGP 147 Query: 136 WSSVVNGVLWPWIFLLMRKVRQQFAV 161 S + + + M R Q V Sbjct: 148 VSRHMAVTVAVFPIFAMLFGRIQARV 173 >UniRef50_B8HRB3 Rod shape-determining protein MreD n=12 Tax=Cyanobacteria RepID=B8HRB3_CYAP4 Length = 183 Score = 38.6 bits (89), Expect = 0.067, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 10/164 (6%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 ++ L +L + + L PNW+L+ ++ W + G V+G I Sbjct: 17 NWGLIVGSVVLCSLAMPVRLPSMELAGIGPNWLLIWVVTWSMKRNVVQGALAGLVLGWIQ 76 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKY-QLFRNLALWQQALVVMLLSLVVDIIVFWAEFLV 125 D ++ +A++ + L A Q F AL+V + ++ + I+ Sbjct: 77 DSLTAPHP-THAIALAAVGMLTARLQKQRFIVEDFISVALIVFGMVILAETILAIQMAAY 135 Query: 126 INVSFRPEVFW--------SSVVNGVLWPWIFLLMRKVRQQFAV 161 E+++ S+++ + P I+ + + Q V Sbjct: 136 HGDLSLQEIWFNHRQVALSSAILTSLWAPAIYYPLNRWWQFLRV 179 >UniRef50_B0PGC1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGC1_9FIRM Length = 173 Score = 38.6 bits (89), Expect = 0.067, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 52/151 (34%), Gaps = 5/151 (3%) Query: 17 LIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGV 76 L +LQ P +++ RPN V+ + + G + G + DL + G Sbjct: 20 LFLYVLQTTPRLFSILGVRPNLVIPAAVCIAVLEGAFAGGVYGALAGILCDLAGSALFGF 79 Query: 77 RVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFW 136 + + L + L++ + L ++ F +++ VF Sbjct: 80 SAVILMPACVAAGLLVTYLLRPGMINYVLLLAGVLLTRGLLDFLLNYVMWGYDSVWMVFV 139 Query: 137 -----SSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + + + P ++ L+ +R Q + Sbjct: 140 YGTLPGIIYSAAVSPLVYYLLAVIRGQLEAR 170 >UniRef50_A1B9A6 Putative rod shape-determining protein MreD n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B9A6_PARDP Length = 176 Score = 38.6 bits (89), Expect = 0.070, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 1/151 (0%) Query: 3 SYRSQGRWVIWLSFLIALLLQIMPW-PDNLIVFRPNWVLLILLYWILALPHRVNVGTGFV 61 R G+ + FL L +++P P + P+ L ++L W+L P +V V T Sbjct: 7 RQRIVGQALFVALFLAILFWRLLPLAPGRIGWPGPDLALCLVLVWVLRRPEQVPVLTIAA 66 Query: 62 MGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWA 121 + I D++ +G+ I + Q +R L + L V +L ++ + Sbjct: 67 LFLIEDILLMRPIGLGAALAVIGTEAARKREQRWRELPFMVEWLRVAMLLALMMVANRVL 126 Query: 122 EFLVINVSFRPEVFWSSVVNGVLWPWIFLLM 152 + + V + + Sbjct: 127 LAIFFLPLPPLGQVILQFIATVAAYPLVAGL 157 >UniRef50_D0MDV5 Rod shape-determining protein MreD n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDV5_RHOM4 Length = 166 Score = 38.6 bits (89), Expect = 0.079, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 31 LIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVAL 90 L P+ VLL + Y L R + GF+ G +LD + S G+ LA S++ +L+ L Sbjct: 37 LWGAYPDAVLLFVAYLGLTYGRRAGLIGGFLCGFLLDALLDS-WGLHALAKSLMGFLIGL 95 Query: 91 K 91 Sbjct: 96 F 96 >UniRef50_A4EEW2 Putative rod shape-determining protein MreD n=1 Tax=Roseobacter sp. CCS2 RepID=A4EEW2_9RHOB Length = 179 Score = 38.3 bits (88), Expect = 0.080, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 64/149 (42%) Query: 7 QGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAIL 66 QG + L+F++ ++ + + P+ +L L W++ P V V ++ + Sbjct: 12 QGGVFLALAFVLIVVDLVPLDMRPSLWVSPDLLLATTLAWVVRKPTYVPVLVIALLFLMT 71 Query: 67 DLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVI 126 D + G+ + I++ ++ +++ FRN+ L + V + + + I+ +V+ Sbjct: 72 DFLFMRPPGLWAALVVILSEVLRRQHREFRNMPLLVEWGTVAVGIIAITIVNRIVLAIVV 131 Query: 127 NVSFRPEVFWSSVVNGVLWPWIFLLMRKV 155 + + ++ +L I LL+ Sbjct: 132 SPQAPLGLTLIEMIATILVYPIVLLVAHF 160 >UniRef50_Q5WER3 Rod shape-determining protein MreD n=3 Tax=Bacillus RepID=Q5WER3_BACSK Length = 174 Score = 38.3 bits (88), Expect = 0.084, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 44/113 (38%) Query: 32 IVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALK 91 + P + L++++ L +V + G G I D++ + LG+ + + Y +A+ Sbjct: 33 QIVVPRFALIVIVLIGLYSGKQVGMLYGLAFGLIFDVVYTNYLGIYTFGFACLGYALAVP 92 Query: 92 YQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVL 144 + + ALW L ++ + L + F ++ ++ Sbjct: 93 LKAVKESALWAVVLAIVAVFAFEYYQYGLFYVLGVTEMQGSTFFMDRLLPTLV 145 >UniRef50_Q74BG1 Rod shape-determining protein MreD, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74BG1_GEOSL Length = 161 Score = 38.3 bits (88), Expect = 0.087, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 1/132 (0%) Query: 9 RWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDL 68 W L F +L + F+PN ++L +++ L V FV+G + D Sbjct: 5 IWYAILVFAAIILQVSVIPTHIADPFKPNLLILFVVFMGLREELGWGVL-AFVLGLLHDS 63 Query: 69 ISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINV 128 SG LG+ + +I L +L L ++V + L + Sbjct: 64 FSGLYLGLNAFSYLVIFLLFSLVAGRLYTDRRSLMILGTFSATMVSGLFSLLLLLLFSSS 123 Query: 129 SFRPEVFWSSVV 140 +V Sbjct: 124 HGIYASLLEGLV 135 >UniRef50_A3WCG2 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCG2_9SPHN Length = 186 Score = 38.3 bits (88), Expect = 0.099, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 59/150 (39%), Gaps = 1/150 (0%) Query: 13 WLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGS 72 ++S +I LL + +++ P LI L W + P + + G +GA DL SG Sbjct: 33 YISIMIGSLLPLYAL-ADVMPILPPLGFLIFLGWRVMRPGLMPLWVGVPLGAFDDLFSGQ 91 Query: 73 TLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRP 132 G +L S+ ++ L F WQ L ++ I I ++ Sbjct: 92 PFGSAILLWSLTMIVLELIETRFPWRGFWQDWFTAGLAIVLYIIAAMVVSGATIQLTVLF 151 Query: 133 EVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ 162 + ++ +++P + L+ + + + Sbjct: 152 AILPQIALSVLIYPLVARLIAWLDRFRLSR 181 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.323 0.158 0.468 Lambda K H 0.267 0.0483 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,257,827,424 Number of Sequences: 3077464 Number of extensions: 66615980 Number of successful extensions: 598651 Number of sequences better than 1.0e-01: 981 Number of HSP's better than 0.1 without gapping: 785 Number of HSP's successfully gapped in prelim test: 1466 Number of HSP's that attempted gapping in prelim test: 595276 Number of HSP's gapped (non-prelim): 3308 length of query: 162 length of database: 1,040,396,356 effective HSP length: 118 effective length of query: 44 effective length of database: 677,255,604 effective search space: 29799246576 effective search space used: 29799246576 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (20.8 bits) S2: 88 (38.3 bits)