39 c3ncoA_ Probab=93.23   E-value=0.66  Score=25.48  Aligned_columns=128  Identities=13%

Q ss_pred             HHHHHHHHHCCCCEEEE--EEEECCCCCCCCCCCC----HHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCHHHHHHHH
Q ss_conf             99999998559878999--8632071003777664----18998862224188799805888134422101335689999
Q batch____        41 QGLMSQLRLQGFDTLVL--QWTRYGDAFTQPEQRT----LLFKRAAAAQQAGLKLIVGLNADPEFFMHQKQSSAALESYL  114 (296)
Q Consensus        41 q~~~~~~~~lG~~tLIv--QWt~yg~~~~~g~~~~----~l~~~l~~A~~~Gikv~vGL~~Dp~ywq~~~~d~~~~~~~L  114 (296)
                      ++.++.++..|++++=+  -|-.+-.....+..+.    .|++.++.+.+.||+|++.|-..+.++............++
T Consensus        37 e~d~~~ia~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~viidlH~~~~~~~~~~~~~~~~~~~~  116 (313)
T c3ncoA_          37 DEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELYQAPDKYGPVLVEIW  116 (313)
T ss_dssp             HHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHHHCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf             99999999859988998276888157888876089999999999999998898899980168643566213579998667


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             9999878999999875348984401532014842338988999999999988875203688841898
Q batch____       115 NRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLLTWLNNAQRLISDVSAKPVYIS  181 (296)
Q Consensus       115 ~~~~~~~~~~a~~~~a~~~~~v~GWYiP~EiD~~~w~~~~~r~~L~~~L~~~~~~~~~~~p~Pv~IS  181 (296)
                      ...+...         +....+.||-+--|+....  .+.....+++..-..++..+.  -.++.++
T Consensus       117 ~~~a~~~---------~~~~~~~~~~l~NEp~~~~--~~~~~~~~~~~~~~~ir~~~p--~~~iiv~  170 (313)
T c3ncoA_         117 KQVAQAF---------KDYPDKLFFEIFNEPAQNL--TPTKWNELYPKVLGEIRKTNP--SRIVIID  170 (313)
T ss_dssp             HHHHHHH---------TTSCTTEEEECCSCCCTTS--CHHHHHHHHHHHHHHHHHHCS--SCCEEEE
T ss_pred             HHHHHHH---------CCCCCEEEEECCCCCCCCC--CHHHHHHHHHHHHHHHCCCCC--CCEEEEC
T ss_conf             9999996---------2799389974344557788--988999999999986412478--8279972