28 c3civA_ Probab=95.47   E-value=0.2  Score=28.56  Aligned_columns=158  Identities=13%

Q ss_pred             CCEEEECCCHHHCCCCHHHHHHHHHHHHHCCCCEEEE-----------EEEECCCCCCCCCCCCHHHHHHHHHHHCCCEE
Q ss_conf             7505855221318889688999999998559878999-----------86320710037776641899886222418879
Q batch____        21 MKGIIWQPQNRDSQVTDTQWQGLMSQLRLQGFDTLVL-----------QWTRYGDAFTQPEQRTLLFKRAAAAQQAGLKL   89 (296)
Q Consensus        21 ~~Gif~QP~n~d~~~~~~~Wq~~~~~~~~lG~~tLIv-----------QWt~yg~~~~~g~~~~~l~~~l~~A~~~Gikv   89 (296)
                      ++|+=+.+.-.+-.+....=++.|+.||.+||+++-|           .+..++..  +...+.-|++.++.|.+.||+|
T Consensus         9 i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~G~N~vRi~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~i~~A~~~Gl~V   86 (316)
T c3civA_           9 IRGMTFGFVGQHGTWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPP--VTVSDDEIASMAELAHALGLKV   86 (316)
T ss_dssp             EEEEEESTTCBTTGGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTT--TBCCHHHHHHHHHHHHHTTCEE
T ss_pred             CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCEE
T ss_conf             15634144147788883689999999998399899982324777767765444767--7679789999999998689879


Q ss_pred             EEEC----CCCC-----HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             9805----8881-----344221013356899999999878999999875348984401532014842338988999999
Q batch____        90 IVGL----NADP-----EFFMHQKQSSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLL  160 (296)
Q Consensus        90 ~vGL----~~Dp-----~ywq~~~~d~~~~~~~L~~~~~~~~~~a~~~~a~~~~~v~GWYiP~EiD~~~w~~~~~r~~L~  160 (296)
                      ++.+    +.|+     ++...........+...+.+.......+...-.-.+   .-+-+--|+..     ......++
T Consensus        87 il~~h~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~n---E~~~~gne~~~-----~~~~~~~~  158 (316)
T c3civA_          87 CLKPTVNCRDGTWRGEIRFEKEHGPDLESWEAWFGSYSDMMAHYAHVAKRTGC---EMFCVGCEMTT-----AEPHEAMW  158 (316)
T ss_dssp             EEEEEEEETTCCCGGGCCCSBSCCTTSSBHHHHHHHHHHHHHHHHHHHHHTTC---SEEEEEESCTT-----TTTCHHHH
T ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC---CEEECCCCCCC-----CHHHHHHH
T ss_conf             99723588887655566767860125576999999999999879999874199---85850677776-----00146789


Q ss_pred             HHHHHHHHHHHCCCCCCEEEEEECCCCCCH
Q ss_conf             999988875203688841898744778898
Q batch____       161 TWLNNAQRLISDVSAKPVYISSFFAGNMSP  190 (296)
Q Consensus       161 ~~L~~~~~~~~~~~p~Pv~IS~y~sg~~~P  190 (296)
                      +.+-..+++.+.  ..++.++.+......+
T Consensus       159 ~~~~~~ir~~dp--~~~~~~~~~~~~~~~~  186 (316)
T c3civA_         159 RETIARVRTEYD--GLVTYNCNHGREEHVR  186 (316)
T ss_dssp             HHHHHHHHHHCC--SEEEEEEETTCTTTCS
T ss_pred             HHHHHHHHHHCC--CCEEEECCCCCCCCCC
T ss_conf             999999997469--9779944688633345