Phyre 2 alignment of P64467 with c3frwF_

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Job Description | P64467
Confidence | 7.00% | Date | Thu Jan 5 12:08:38 GMT 2012
Rank | 29 | Aligned Residues | 57
% Identity | 19% | Template | c3frwF_
PDB info | PDB header:structural genomics, unknown function | Chain: F: PDB Molecule:putative trp repressor protein; | PDBTitle: crystal structure of putative trpr protein from ruminococcus obeum
Resolution | 2.05 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | T | V | Q | D | Y | L | L | K | F | R | K | I | S | S | L | E | S | L | E | K | L | Y | D | H | L | N | Y | T | L | T | D | D | Q | E | L | I | N | M | Y | R | A | A | D | H | R | R | A | E | L | V | S | G | G | R | L | F | D | L | G | Q | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
Template Sequence |  | I | R | T | E | E | V | D | H | L | F | E | A | I | L | C | L | K | N | K | E | E | C | Y | T | F | F | E | D | V | C | T | I | N | . | E | L | L | S | L | . | . | S | Q | R | F | E | V | A | K | X | L | T | D | K | R | T | Y | L | . | . | D | I
Template Known Secondary structure |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  | T |  |  | S |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | . | . |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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