Phyre 2 alignment of P64467 with c2qfjA_

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Job Description | P64467
Confidence | 2.90% | Date | Thu Jan 5 12:08:38 GMT 2012
Rank | 85 | Aligned Residues | 24
% Identity | 21% | Template | c2qfjA_
PDB info | PDB header:transcription repressor/dna | Chain: A: PDB Molecule:fbp-interacting repressor; | PDBTitle: crystal structure of first two rrm domains of fir bound to2 ssdna from a portion of fuse
Resolution | 2.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | A | A | D | H | R | R | A | E | L | V | S | G | G | R | L | F | D | L | G | Q | V | P | K | S | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Sequence |  | S | A | A | Q | R | Q | G | A | L | A | I | . | M | S | R | V | Y | . | V | G | S | I | Y | Y | E | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  | T |  |  |  | . |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 100 | . | . | . | . | . | . | . | . | . | 110 |  | . | . | . | . | . |  | . | . | . | . | 120 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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