Phyre 2 alignment of P76471 with c2fmdA_

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Job Description | P76471
Confidence | 2.85% | Date | Thu Jan 5 12:23:16 GMT 2012
Rank | 62 | Aligned Residues | 47
% Identity | 17% | Template | c2fmdA_
PDB info | PDB header:sugar binding protein | Chain: A: PDB Molecule:lectin; | PDBTitle: structural basis of carbohydrate recognition by bowringia2 milbraedii seed agglutinin
Resolution | 1.90 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 133 | . | . | . | . | . | . | 140 | . |  | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | A | N | A | G | A | R | Y | T | . | I | M | R | P | V | S | I | E | A | G | Y | R | Y | L | N | L | S | G | K | D | G | N | R | D | N | A | V | A | D | G | P | Y | V | G | V | N | A | S
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | A | T | A | H | I | S | Y | N | S | A | S | K | R | L | S | V | V | S | S | Y | P | N | S | S | P | V | V | V | S | F | D | V | E | L | N | N | V | P | W | V | R | V | G | F | S | A | T
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  | B |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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