29 c3u4yA_ Probab=98.55   E-value=7.9e-05  Score=49.56  Aligned_columns=290  Identities=16%

Q ss_pred             CEEEEECCC-CCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEE-CCCCEEEEE
Q ss_conf             999995799-809999678885877870578765444334653367503677655433556658459995-579779999
Q batch____       225 DTLYLCTAH-QRLFALDAASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILP-VNDGRLIAI  302 (796)
Q Consensus       225 g~lYv~t~~-~~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~RGva~~~~~~~~~~~~~~a~~~~rI~~~-t~dg~L~AL  302 (796)
                      +..||...+ ++|..+|.+|++++.++...............+                      ++|+. ..++.|..+
T Consensus         4 ~~~~v~~~~~~~vsv~d~~t~~~~~~~~~g~~p~~~~~~~dg~----------------------~~~v~~~~~~~i~~i   61 (319)
T c3u4yA_           4 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDCS----------------------NVVVTSDFCQTLVQI   61 (319)
T ss_dssp             CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSSC----------------------EEEEEESTTCEEEEE
T ss_pred             CEEEEECCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCC----------------------EEEEEECCCCEEEEE
T ss_conf             4799981899879999999984999998799438999989998----------------------999995899859999


Q ss_pred             ECCCCCEEEEECCCCEEEECCCCCCCCCCCEEEECCCEEECCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECC
Q ss_conf             88898693031278414420467777665213202748888999994123778311367607999846887289999547
Q batch____       303 NAENGKLCETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPG  382 (796)
Q Consensus       303 DA~TG~~~w~f~~~g~v~l~~~~~~~~~~~~~~TsaP~V~~g~VivG~~~~d~~~~~~~~G~v~A~Da~TG~~~W~~~~~  382 (796)
                      |.+||++.......           .....+.+.-+|   +++.++......+..      .+..+|.++++++.+..  
T Consensus        62 d~~t~~~~~~~~~~-----------~~~~~~~v~~sp---dg~~l~v~~~~~~~~------~~~~~d~~~~~~i~~i~--  119 (319)
T c3u4yA_          62 ETQLEPPKVVAIQE-----------GQSSXADVDITP---DDQFAVTVTGLNHPF------NXQSYSFLKNKFISTIP--  119 (319)
T ss_dssp             ECSSSSCEEEEEEE-----------CSSCCCCEEECT---TSSEEEECCCSSSSC------EEEEEETTTTEEEEEEE--
T ss_pred             ECCCCCEEEEEEEC-----------CCCCCEEEEECC---CCCEEEEEECCCCCE------EEEEEECCCCEEEEEEE--
T ss_conf             87888659999832-----------577632699957---898899980588722------48998888880999995--


Q ss_pred             CCCCCCCCCCCCEECCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCC
Q ss_conf             88776777767433167766433114617788699964778765356666666544455068760566847986532477
Q batch____       383 AKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHH  462 (796)
Q Consensus       383 ~p~~~~~~~~g~~~~~gg~~vW~~~s~D~~~glVy~~tGn~~pd~~g~~r~p~dn~~~~SvvALD~~TG~~~W~~Q~~~~  462 (796)
                                       .+......++++..+.+|+                           .+.......|.++....
T Consensus       120 -----------------~~~~~~~ia~~~d~~~~~v---------------------------~~~~~~~~~~~~~~~~~  155 (319)
T c3u4yA_         120 -----------------IPYDAVGIAISPNGNGLIL---------------------------IDRSSANTVRRFKIDAD  155 (319)
T ss_dssp             -----------------CCTTEEEEEECTTSSCEEE---------------------------EEETTTTEEEEEEECTT
T ss_pred             -----------------CCCCCEEEEEECCCCEEEE---------------------------EECCCCEEEEEEECCCC
T ss_conf             -----------------7898138999715760688---------------------------62666406899504554


Q ss_pred             CCC------CCCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             410------36677773799723788244589983798359999788881776420211334445664122326555677
Q batch____       463 DLW------DMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTPTQPFSELS  536 (796)
Q Consensus       463 D~W------D~D~~~~p~L~d~~~dG~~~~~v~~~~K~G~~yvLDr~TG~~i~~~~e~~vp~~~~~ge~~~~tqp~~~~p  536 (796)
                      ...      ....+..|.-+.+.-+++.  +++....++.+.++|..+++.+........                    
T Consensus       156 ~~~~~~~~~~i~~~~~p~~i~~sp~~~~--~~v~~~~~~~i~v~d~~~~~~~~~~~~~~~--------------------  213 (319)
T c3u4yA_         156 GVLFDTGQEFISGGTRPFNITFTPDGNF--AFVANLIGNSIGILETQNPENITLLNAVGT--------------------  213 (319)
T ss_dssp             CCEEEEEEEEECSSSSEEEEEECTTSSE--EEEEETTTTEEEEEECSSTTSCEEEEEEEC--------------------
T ss_pred             CCCCCCCEEEECCCCCCEEEEECCCCCE--EEEEECCCCEEEEEECCCCCEEEEEECCCC--------------------
T ss_conf             3001022167136897148998177750--476406897499998789847677631346--------------------


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEE
Q ss_conf             54444456311224671222344443100356664117678823873455778643764256887669982335762012
Q batch____       537 FRPTKDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSK  616 (796)
Q Consensus       537 ~~~~~~~~~~d~w~~t~~d~~~~~~~~~~~~~~g~~tpp~~~~~~~~Pg~~Gg~nW~~~a~dp~~~~~yv~~~~~~~~~~  616 (796)
                                                                          +.+=.+.+++|.-+.+|+...+.     
T Consensus       214 ----------------------------------------------------~~~~~~i~~s~dg~~l~v~~~~~-----  236 (319)
T c3u4yA_         214 ----------------------------------------------------NNLPGTIVVSRDGSTVYVLTEST-----  236 (319)
T ss_dssp             ----------------------------------------------------SSCCCCEEECTTSSEEEEECSSE-----
T ss_pred             ----------------------------------------------------CCCEEEEEEECCCCEEEEEECCC-----
T ss_conf             ----------------------------------------------------76402489932598899994799-----


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCC
Q ss_conf             32214666432455556566776655646773223444445544654467884389999578792874533687543444
Q batch____       617 LIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEVVWKKRIGTPQDSMP  696 (796)
Q Consensus       617 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~py~~~~~~~~~~~g~p~~~Pp~G~l~AiD~~TGki~W~~p~g~~~~~~p  696 (796)
                                                                           +.+..+|..+|++.-....+......+
T Consensus       237 -----------------------------------------------------~~i~~~d~~~g~~~~~~~~~~~~~~~~  263 (319)
T c3u4yA_         237 -----------------------------------------------------VDVFNFNQLSGTLSFVKSFGHGLLIDP  263 (319)
T ss_dssp             -----------------------------------------------------EEEEEEETTTTEEEEEEEEECCCCCCC
T ss_pred             -----------------------------------------------------CEEEEEECCCCEEEEEECCCCCEEECC
T ss_conf             -----------------------------------------------------859999789980999603576325113


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEECCCCCEE
Q ss_conf             455555554455555563589639759983169984999988878799
Q batch____       697 FPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKL  744 (796)
Q Consensus       697 ~~~~~~~~~~~g~p~~gG~l~TagglvF~~gt~dg~lrA~Da~TGk~L  744 (796)
                      .         .+....+-.+...+..+|+++..|+.++-+|. +||.+
T Consensus       264 ~---------~~~~~~~~a~~~d~~~l~vs~~~~~~i~v~d~-~~~~~  301 (319)
T c3u4yA_         264 R---------PLFGANQXALNKTETKLFISANISRELKVFTI-SGKVV  301 (319)
T ss_dssp             G---------GGTTCCCEEECTTSSEEEEEETTTTEEEEEET-TSCEE
T ss_pred             C---------CCCCCCEEEECCCCCEEEEEECCCCEEEEEEC-CCCEE
T ss_conf             5---------56654113898889989999379972999987-89766