Phyre 2 alignment of P32701 with c3rlgA_

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Job Description | P32701
Confidence | 71.19% | Date | Thu Jan 5 11:50:21 GMT 2012
Rank | 172 | Aligned Residues | 55
% Identity | 13% | Template | c3rlgA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:sphingomyelin phosphodiesterase d lisictox-alphaia1a; | PDBTitle: crystal structure of loxosceles intermedia phospholipase d isoform 12 h12a mutant
Resolution | 1.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 463 | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | H | I | I | E | L | A | H | S | L | G | L | K | T | I | A | E | G | V | E | T | E | E | Q | V | N | W | L | R | K | R | G | V | R | Y | C | Q | G | W | F | F | A | K | A | M | P | P | Q | V | F | M | Q | W | M | E | Q | L | P | A | R | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | A | N | R | D | S | A | N | G | F | I | N | K | V | Y | Y | W | T | V | D | K | R | S | T | T | R | D | A | L | D | A | G | V | D | G | I | M | T | N | Y | . | . | . | . | . | . | P | D | V | I | T | D | V | L | N | E | A | A | Y | K | K
Template Known Secondary structure |  |  |  |  |  | T | S | T | T |  |  |  | S |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  | T | T |  | S |  |  |  |  | S |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | S |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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