09/01/2012 01:10:31 : INFO  : Run start: Mon Jan  9 01:10:30 GMT 2012
09/01/2012 01:10:39 : INFO  : Initialised job
09/01/2012 01:10:42 : INFO  : Renaming log file 'phyre2_20120109_011029.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/45dcf1aa1162ee56/phyre_20120109_011029.log'
09/01/2012 01:10:44 : INFO  : Initialised job:
Sequence
>batch____
MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRTFAQLALDKSELVIRQA
DLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDNHFLCSSLIAPVNGYTIAP
ADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPLFWSEVMSDDPTLQWGVYDTV
TKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVYSTKRPIAAIVATSYQRLITHFY
NHLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCI
GAEALLRWPGEQGQIMNPAEFIPLAEKEGMIEQITDYVIDNVFRDLGDYLATHADRYVSI
NLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVDKMTPIILAFRQAGYEVA
IDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEG
VETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPARELTRGQ

09/01/2012 01:10:45 : INFO  : Checked sequence
09/01/2012 01:10:50 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 01:10:51 : INFO  : PSI-BLAST 3 iterations
09/01/2012 01:13:35 : INFO  : PSI-BLAST 5 iterations
09/01/2012 01:18:54 : INFO  : Finished PSI-BLAST
09/01/2012 01:18:57 : INFO  : Running Buildali to generate a3m file
09/01/2012 03:07:13 : INFO  : Converting to HMM
09/01/2012 03:07:24 : INFO  : Calibrating HMM
09/01/2012 03:07:44 : INFO  : Searching HMM database
09/01/2012 03:16:28 : INFO  : Finished buildali
09/01/2012 03:16:30 : INFO  : Predicting secondary structure
09/01/2012 03:16:41 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 03:16:43 : INFO  : Predicting Disordered regions
09/01/2012 03:16:49 : INFO  : Predicted Disorder (Disopred)
09/01/2012 03:16:51 : INFO  : Running memsat_svm check
09/01/2012 03:19:52 : INFO  : Globular protein
09/01/2012 03:19:54 : INFO  : Predicted Transmembrane (memsat_svm) ID '45dcf1aa1162ee56'
09/01/2012 03:19:58 : INFO  : Initialising fold library search
09/01/2012 03:20:03 : INFO  : Initialised search input
09/01/2012 03:20:07 : INFO  : Building Ensemble models
09/01/2012 03:20:12 : INFO  : Building hh.c3pjwA_.model.1.pdb
09/01/2012 03:20:35 : INFO  : Building hh.c3gfzB_.model.2.pdb
09/01/2012 03:20:52 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/45dcf1aa1162ee56/hh.c3gfzB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/45dcf1aa1162ee56/c3gfzB_.2.pdb
09/01/2012 03:20:58 : INFO  : Building hh.c3hvbB_.model.3.pdb
09/01/2012 03:21:16 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/45dcf1aa1162ee56/hh.c3hvbB_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/45dcf1aa1162ee56/c3hvbB_.3.pdb
09/01/2012 03:21:22 : INFO  : Building hh.c3hv9A_.model.4.pdb
09/01/2012 03:21:40 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/45dcf1aa1162ee56/hh.c3hv9A_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/45dcf1aa1162ee56/c3hv9A_.4.pdb
09/01/2012 03:21:47 : INFO  : Building hh.c3s83A_.model.5.pdb
09/01/2012 03:22:05 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/45dcf1aa1162ee56/hh.c3s83A_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/45dcf1aa1162ee56/c3s83A_.5.pdb
09/01/2012 03:22:10 : INFO  : Building c3pjwA_.1.pdb
09/01/2012 03:22:31 : INFO  : Building c3gfzB_.2.pdb
09/01/2012 03:22:53 : INFO  : Building c3hvbB_.3.pdb
09/01/2012 03:23:14 : INFO  : Building c3hv9A_.4.pdb
09/01/2012 03:23:36 : INFO  : Building c3s83A_.5.pdb
09/01/2012 03:23:57 : INFO  : Building c3pfmA_.6.pdb
09/01/2012 03:24:18 : INFO  : Building c2w27A_.7.pdb
09/01/2012 03:24:40 : INFO  : Building c2r6oB_.8.pdb
09/01/2012 03:25:02 : INFO  : Building d2basa1.9.pdb
09/01/2012 03:25:23 : INFO  : Building c3kzpA_.10.pdb
09/01/2012 03:25:43 : INFO  : Building c1w25B_.11.pdb
09/01/2012 03:26:03 : INFO  : Building c3ezuA_.12.pdb
09/01/2012 03:26:22 : INFO  : Building c3breA_.13.pdb
09/01/2012 03:26:41 : INFO  : Building c3iclA_.14.pdb
09/01/2012 03:27:02 : INFO  : Building c3i5cA_.15.pdb
09/01/2012 03:27:22 : INFO  : Building c3ignA_.16.pdb
09/01/2012 03:27:39 : INFO  : Building c3i5aA_.17.pdb
09/01/2012 03:27:59 : INFO  : Building c3i5bA_.18.pdb
09/01/2012 03:28:17 : INFO  : Building c3hvaA_.19.pdb
09/01/2012 03:28:34 : INFO  : Building c3mtkA_.20.pdb
09/01/2012 03:30:28 : INFO  : Finished HH model building
09/01/2012 03:30:30 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 03:31:55 : INFO  : html domain output complete ID '45dcf1aa1162ee56'
09/01/2012 04:20:12 : INFO  : Run end  : Mon Jan  9 04:20:11 GMT 2012
