Phyre 2 Results for P75958

Email | l.a.kelley@imperial.ac.uk
Description | P75958
Date | Thu Jan 5 12:16:27 GMT 2012
Unique Job ID | 45746946a7ff18a9

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3ftjA_ |
|  | 99.0 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:macrolide export atp-binding/permease protein PDBTitle: crystal structure of the periplasmic region of macb from2 actinobacillus actinomycetemcomitans
2 | c3is6A_ |
|  | 97.5 | 10 | PDB header:transport protein Chain: A: PDB Molecule:putative permease protein, abc transporter; PDBTitle: the crystal structure of a domain of a putative permease protein from2 porphyromonas gingivalis to 2a
3 | c1ciiA_ |
|  | 85.2 | 15 | PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia
4 | c3ltiA_ |
|  | 25.2 | 31 | PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase subunit beta; PDBTitle: crystal structure of the escherichia coli rna polymerase beta subunit2 beta2-betai4 domains
5 | d2r6gg1 |
|  | 15.8 | 13 | Fold:MetI-like Superfamily:MetI-like Family:MetI-like
6 | d1cola_ |
|  | 15.0 | 9 | Fold:Toxins' membrane translocation domains Superfamily:Colicin Family:Colicin
7 | d1mvfd_ |
|  | 13.4 | 17 | Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote
8 | c3k07A_ |
|  | 13.3 | 13 | PDB header:transport protein Chain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa
9 | c2yvxD_ |
|  | 12.1 | 14 | PDB header:transport protein Chain: D: PDB Molecule:mg2+ transporter mgte; PDBTitle: crystal structure of magnesium transporter mgte
10 | d1g8ka1 |
|  | 12.0 | 11 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
11 | d1ub4c_ |
|  | 11.6 | 17 | Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote
12 | d2yvxa3 |
|  | 11.4 | 18 | Fold:MgtE membrane domain-like Superfamily:MgtE membrane domain-like Family:MgtE membrane domain-like
13 | c2jsxA_ |
|  | 11.3 | 11 | PDB header:chaperone Chain: A: PDB Molecule:protein napd; PDBTitle: solution structure of the e. coli tat proofreading2 chaperone protein napd
14 | d1ogya1 |
|  | 10.5 | 11 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
15 | d2jioa1 |
|  | 10.4 | 12 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
16 | d1scjb_ |
|  | 10.4 | 20 | Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Subtilase propeptides/inhibitors
17 | c2cwbA_ |
|  | 9.9 | 16 | PDB header:protein binding Chain: A: PDB Molecule:chimera of immunoglobulin g binding protein g PDBTitle: solution structure of the ubiquitin-associated domain of2 human bmsc-ubp and its complex with ubiquitin
18 | c2a8vA_ |
|  | 9.6 | 21 | PDB header:protein/rna Chain: A: PDB Molecule:rna binding domain of rho transcription PDBTitle: rho transcription termination factor/rna complex
19 | c2l66B_ |
|  | 9.6 | 24 | PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, abrb family; PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea.
20 | c2pmwA_ |
|  | 9.6 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:proprotein convertase subtilisin/kexin type 9; PDBTitle: the crystal structure of proprotein convertase subtilisin2 kexin type 9 (pcsk9)
21 | c2w2mP_ |
| not modelled | 9.6 | 15 | PDB header:hydrolase/receptor Chain: P: PDB Molecule:proprotein convertase subtilisin/kexin type 9; PDBTitle: wt pcsk9-deltac bound to wt egf-a of ldlr
22 | c2p4eP_ |
| not modelled | 9.6 | 15 | PDB header:hydrolase Chain: P: PDB Molecule:proprotein convertase subtilisin/kexin type 9; PDBTitle: crystal structure of pcsk9
23 | d2vbua1 |
| not modelled | 9.5 | 27 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:CTP-dependent riboflavin kinase-like
24 | c1wr1B_ |
| not modelled | 9.3 | 12 | PDB header:signaling protein Chain: B: PDB Molecule:ubiquitin-like protein dsk2; PDBTitle: the complex sturcture of dsk2p uba with ubiquitin
25 | d2dnaa1 |
| not modelled | 9.3 | 12 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain
26 | d1o8ba2 |
| not modelled | 9.2 | 7 | Fold:Ferredoxin-like Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain Family:D-ribose-5-phosphate isomerase (RpiA), lid domain
27 | d1a62a2 |
| not modelled | 9.1 | 21 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like
28 | d1spbp_ |
| not modelled | 9.1 | 20 | Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Subtilase propeptides/inhibitors
29 | c2w1tB_ |
| not modelled | 9.0 | 19 | PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: crystal structure of b. subtilis spovt
30 | d2bwba1 |
| not modelled | 9.0 | 12 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain
31 | c2dahA_ |
| not modelled | 9.0 | 12 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquilin-3; PDBTitle: solution structure of the c-terminal uba domain in the2 human ubiquilin 3
32 | d1vlfm1 |
| not modelled | 8.7 | 13 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
33 | d1veja1 |
| not modelled | 8.6 | 12 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain
34 | c2dnaA_ |
| not modelled | 8.5 | 12 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:unnamed protein product; PDBTitle: solution structure of rsgi ruh-056, a uba domain from mouse2 cdna
35 | c3fewX_ |
| not modelled | 8.5 | 9 | PDB header:immune system Chain: X: PDB Molecule:colicin s4; PDBTitle: structure and function of colicin s4, a colicin with a2 duplicated receptor binding domain
36 | d1y5ia1 |
| not modelled | 8.5 | 17 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
37 | d1h0ha1 |
| not modelled | 8.4 | 17 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
38 | d1m0sa2 |
| not modelled | 8.3 | 14 | Fold:Ferredoxin-like Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain Family:D-ribose-5-phosphate isomerase (RpiA), lid domain
39 | d1uj4a2 |
| not modelled | 8.2 | 14 | Fold:Ferredoxin-like Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain Family:D-ribose-5-phosphate isomerase (RpiA), lid domain
40 | d2daha1 |
| not modelled | 8.2 | 12 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain
41 | c2e74E_ |
| not modelled | 8.1 | 8 | PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex from m.laminosus
42 | c1vf5E_ |
| not modelled | 8.1 | 8 | PDB header:photosynthesis Chain: E: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus
43 | d2e74e1 |
| not modelled | 8.1 | 8 | Fold:Single transmembrane helix Superfamily:PetL subunit of the cytochrome b6f complex Family:PetL subunit of the cytochrome b6f complex
44 | c1vf5R_ |
| not modelled | 8.1 | 8 | PDB header:photosynthesis Chain: R: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus
45 | c2e75E_ |
| not modelled | 8.1 | 8 | PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus
46 | c2e76E_ |
| not modelled | 8.1 | 8 | PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus
47 | d1lk5a2 |
| not modelled | 8.0 | 14 | Fold:Ferredoxin-like Superfamily:D-ribose-5-phosphate isomerase (RpiA), lid domain Family:D-ribose-5-phosphate isomerase (RpiA), lid domain
48 | c3hzqA_ |
| not modelled | 7.9 | 8 | PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: structure of a tetrameric mscl in an expanded intermediate2 state
49 | d1tmoa1 |
| not modelled | 7.9 | 18 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
50 | d1dv0a_ |
| not modelled | 7.9 | 21 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain
51 | d2fy9a1 |
| not modelled | 7.6 | 14 | Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like
52 | c2k21A_ |
| not modelled | 7.5 | 17 | PDB header:membrane protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c
53 | d1dmra1 |
| not modelled | 7.4 | 16 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
54 | c3d31D_ |
| not modelled | 7.4 | 15 | PDB header:transport protein Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease PDBTitle: modbc from methanosarcina acetivorans
55 | d3d31c1 |
| not modelled | 7.4 | 15 | Fold:MetI-like Superfamily:MetI-like Family:MetI-like
56 | d2iv2x1 |
| not modelled | 7.3 | 11 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
57 | d1yfba1 |
| not modelled | 7.2 | 15 | Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like
58 | d1kqfa1 |
| not modelled | 7.2 | 19 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
59 | c2jy5A_ |
| not modelled | 7.1 | 8 | PDB header:signaling protein Chain: A: PDB Molecule:ubiquilin-1; PDBTitle: nmr structure of ubiquilin 1 uba domain
60 | c2kncA_ |
| not modelled | 7.1 | 17 | PDB header:cell adhesion Chain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
61 | c3idwA_ |
| not modelled | 7.0 | 44 | PDB header:endocytosis Chain: A: PDB Molecule:actin cytoskeleton-regulatory complex protein sla1; PDBTitle: crystal structure of sla1 homology domain 2
62 | c2glwA_ |
| not modelled | 7.0 | 26 | PDB header:transcription Chain: A: PDB Molecule:92aa long hypothetical protein; PDBTitle: the solution structure of phs018 from pyrococcus horikoshii
63 | c1eu1A_ |
| not modelled | 6.9 | 18 | PDB header:oxidoreductase Chain: A: PDB Molecule:dimethyl sulfoxide reductase; PDBTitle: the crystal structure of rhodobacter sphaeroides dimethylsulfoxide2 reductase reveals two distinct molybdenum coordination environments.
64 | c2kncB_ |
| not modelled | 6.8 | 6 | PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
65 | d1eu1a1 |
| not modelled | 6.6 | 18 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain
66 | c2iv2X_ |
| not modelled | 6.5 | 11 | PDB header:oxidoreductase Chain: X: PDB Molecule:formate dehydrogenase h; PDBTitle: reinterpretation of reduced form of formate dehydrogenase h2 from e. coli
67 | c1wlfA_ |
| not modelled | 6.4 | 15 | PDB header:protein transport Chain: A: PDB Molecule:peroxisome biogenesis factor 1; PDBTitle: structure of the n-terminal domain of pex1 aaa-atpase:2 characterization of a putative adaptor-binding domain
68 | c2jpcA_ |
| not modelled | 6.2 | 14 | PDB header:dna binding protein Chain: A: PDB Molecule:ssrb; PDBTitle: ssrb dna binding protein
69 | c1h5nC_ |
| not modelled | 6.1 | 18 | PDB header:oxidoreductase Chain: C: PDB Molecule:dmso reductase; PDBTitle: dmso reductase modified by the presence of dms and air
70 | c2ki8A_ |
| not modelled | 6.1 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:tungsten formylmethanofuran dehydrogenase, PDBTitle: solution nmr structure of tungsten formylmethanofuran2 dehydrogenase subunit d from archaeoglobus fulgidus,3 northeast structural genomics consortium target att7
71 | d1e32a1 |
| not modelled | 6.0 | 10 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like
72 | d1q08a_ |
| not modelled | 5.9 | 25 | Fold:Putative DNA-binding domain Superfamily:Putative DNA-binding domain Family:DNA-binding N-terminal domain of transcription activators
73 | c3kwmC_ |
| not modelled | 5.9 | 7 | PDB header:isomerase Chain: C: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: crystal structure of ribose-5-isomerase a
74 | c2k29A_ |
| not modelled | 5.6 | 19 | PDB header:transcription Chain: A: PDB Molecule:antitoxin relb; PDBTitle: structure of the dbd domain of e. coli antitoxin relb
75 | d1oqya2 |
| not modelled | 5.5 | 22 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain
76 | d1ijwc_ |
| not modelled | 5.4 | 25 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain
77 | c2v45A_ |
| not modelled | 5.4 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic nitrate reductase; PDBTitle: a new catalytic mechanism of periplasmic nitrate reductase2 from desulfovibrio desulfuricans atcc 27774 from3 crystallographic and epr data and based on detailed4 analysis of the sixth ligand
78 | d1m56d_ |
| not modelled | 5.4 | 12 | Fold:Single transmembrane helix Superfamily:Bacterial aa3 type cytochrome c oxidase subunit IV Family:Bacterial aa3 type cytochrome c oxidase subunit IV
79 | d1ygya3 |
| not modelled | 5.3 | 3 | Fold:Ferredoxin-like Superfamily:ACT-like Family:Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
80 | c1lkzB_ |
| not modelled | 5.3 | 7 | PDB header:isomerase Chain: B: PDB Molecule:ribose 5-phosphate isomerase a; PDBTitle: crystal structure of d-ribose-5-phosphate isomerase (rpia)2 from escherichia coli.
81 | c2rmzA_ |
| not modelled | 5.3 | 14 | PDB header:cell adhesion Chain: A: PDB Molecule:integrin beta-3; PDBTitle: bicelle-embedded integrin beta3 transmembrane segment
82 | c2nyaF_ |
| not modelled | 5.3 | 18 | PDB header:oxidoreductase Chain: F: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the periplasmic nitrate reductase2 (nap) from escherichia coli
83 | c1zc1A_ |
| not modelled | 5.3 | 20 | PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites
84 | c2ro5B_ |
| not modelled | 5.3 | 19 | PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: rdc-refined solution structure of the n-terminal dna2 recognition domain of the bacillus subtilis transition-3 state regulator spovt
85 | c2yujA_ |
| not modelled | 5.3 | 20 | PDB header:protein binding Chain: A: PDB Molecule:ubiquitin fusion degradation 1-like; PDBTitle: solution structure of human ubiquitin fusion degradation2 protein 1 homolog ufd1
86 | c2ivfA_ |
| not modelled | 5.3 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:ethylbenzene dehydrogenase alpha-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum
87 | d1dzfa2 |
| not modelled | 5.2 | 29 | Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5
88 | c1lk5C_ |
| not modelled | 5.1 | 14 | PDB header:isomerase Chain: C: PDB Molecule:d-ribose-5-phosphate isomerase; PDBTitle: structure of the d-ribose-5-phosphate isomerase from2 pyrococcus horikoshii
89 | c2kr6A_ |
| not modelled | 5.0 | 26 | PDB header:hydrolase Chain: A: PDB Molecule:presenilin-1; PDBTitle: solution structure of presenilin-1 ctf subunit
90 | d1hmja_ |
| not modelled | 5.0 | 18 | Fold:RPB5-like RNA polymerase subunit Superfamily:RPB5-like RNA polymerase subunit Family:RPB5
91 | c1g8jC_ |
| not modelled | 5.0 | 11 | PDB header:oxidoreductase Chain: C: PDB Molecule:arsenite oxidase; PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis