Phyre 2 alignment of P0ACJ0 with c3tqnC_

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Job Description | P0ACJ0
Confidence | 87.70% | Date | Thu Jan 5 11:18:17 GMT 2012
Rank | 326 | Aligned Residues | 30
% Identity | 17% | Template | c3tqnC_
PDB info | PDB header:transcription | Chain: C: PDB Molecule:transcriptional regulator, gntr family; | PDBTitle: structure of the transcriptional regulator of the gntr family, from2 coxiella burnetii.
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | N | V | E | L | S | K | R | V | G | L | S | P | T | P | C | L | E | R | V | R | R | L | E | R | Q | G | F | I | Q | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | I | R | K | I | S | T | E | Y | Q | I | N | P | L | T | V | . | S | A | Y | Q | S | L | L | D | D | N | V | I | E | K
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T |  |  | S | S | S |  | . |  |  |  |  |  |  |  |  | T | T | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |  | . | . | . | . | . | . | . | . | . | 60 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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