55 d1nj1a3 Probab=98.87   E-value=1.1e-07  Score=71.15  Aligned_columns=191  Identities=17%

Q ss_pred             HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEEEE--------CCCCCCCCCCCHHHHHHHHC
Q ss_conf             9999999999998679789966523510058322676778855172443773--------42510368887888999942
Q batch____       109 VTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF--------DTTRLLRTQTSGVQIRTMKA  180 (327)
Q Consensus       109 l~~v~~~ir~if~~mGF~e~egPevEs~~~nfdaL~~p~~HPaRd~~Dtfyi--------~~~~~LRthts~~~~r~l~~  180 (327)
                      ..++++-+++.+.. ||.++..|.+.+.    +.|.--..|..--....|.+        .+..+||.-+.+..++++.+
T Consensus        36 ~~~l~~~~~~~~~~-g~~ev~~P~l~~~----~~l~~~sg~~~~f~~~l~~~~~~~~d~~~~~~~L~pt~e~~~~~~~~~  110 (265)
T d1nj1a3          36 RKNTLKILRRILDR-DHEEVLFPLLVPE----DELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRPTSETVMYPMFAL  110 (265)
T ss_dssp             HHHHHHHHHHHHTT-TCEECCCCSEEEH----HHHTTSHHHHHHTTTTCCEEEEETTEEEEEEEEECSSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHC-CCEEEECCCEECH----HHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHHHH
T ss_conf             99999999999974-9807734530058----886311374355310023531577665663013413571899999973


Q ss_pred             -----CCCCEEEEEECCEECCCCCCC----CCCEEEEEE-EEEECCCC-----CHHHHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf             -----899748998232134665643----487012267-99977999-----999999999999998389873689724
Q batch____       181 -----QQPPIRIIAPGRVYRNDYDQT----HTPMFHQME-GLIVDTNI-----SFTNLKGTLHDFLRNFFEEDLQIRFRP  245 (327)
Q Consensus       181 -----~~~p~r~~~~g~vyR~d~D~t----H~~~F~Q~E-g~~v~~~~-----~~~~L~~~l~~~~~~~~~~~~~~r~rp  245 (327)
                           ...|+|+..+|+|||+|...+    ...||+|+| +..+..+.     .+..+......+++.++.+-..++...
T Consensus       111 ~~~s~~~LPl~l~q~~~~fR~E~~~~~gl~R~reF~~~ed~~~~~~~~e~~~~~~~~~l~~~~~i~~~lgl~~~~~~~~~  190 (265)
T d1nj1a3         111 WVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEFFNSLGIPYLITRRPP  190 (265)
T ss_dssp             HCCBTTTCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCT
T ss_pred             HCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf             00687534279986774430467888851676631478433788649789999999999999999997199528876257


Q ss_pred             -CCCCCCCCCEEEEEECCCCCEEEEECC---CCCCHHHHHHCCCCHH-----HEEEEEEECCHHHHHHHH
Q ss_conf             -668988983589998279946898337---6617888776599854-----506886422278998997
Q batch____       246 -SYFPFTEPSAEVDVMGKNGKWLEVLGC---GMVHPNVLRNVGIDPE-----VYSGFAFGMGMERLTMLR  306 (327)
Q Consensus       246 -~yfPfTePs~E~dv~~~~~~WiEi~g~---G~~~p~vl~~~g~d~~-----~~~g~AfG~GleRlaMl~  306 (327)
                       .-+..-..+.++++..+.+.|+|++.|   |-.-++.+.....|++     ++++ .||+| +|+.-..
T Consensus       191 ~d~~~~~~~~~~~e~~~p~~~~~e~~~~~~l~~~~s~~~~i~y~~~dg~~~~~~~~-~~G~~-~R~l~al  258 (265)
T d1nj1a3         191 WDKFPGSEYTVAFDTLMPDGKTLQIGTVHNLGQTFARTFEIKFETPEGDHEYVHQT-CYGLS-DRVIASV  258 (265)
T ss_dssp             TTSCTTCSEEEEEEEECTTSCEEEEEEEEEEETHHHHHHTCEEECTTSCEEECEEE-EEEEC-THHHHHH
T ss_pred             CCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCHHHCCCEEECCCCCEEEEEEE-CHHHH-HHHHHHH
T ss_conf             87752111221001214787605666665024222123471898789988553562-23389-9999999