BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (71 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P94504 Transcriptional regulatory protein yvrH n=5 Tax=... 127 1e-28 UniRef50_A8F5W8 Two component transcriptional regulator, winged ... 124 1e-27 UniRef50_Q65F19 Two-component response regulator YvrH n=85 Tax=F... 123 2e-27 UniRef50_Q2RZP5 Response regulator DrrA n=11 Tax=Bacteria RepID=... 123 2e-27 UniRef50_Q8DLA7 Two-component response regulator n=20 Tax=Bacter... 122 5e-27 UniRef50_Q7NMA6 Two-component response regulator n=2 Tax=Bacteri... 121 6e-27 UniRef50_Q1AZ24 Two component transcriptional regulator, winged ... 120 1e-26 UniRef50_C8VW64 Two component transcriptional regulator, winged ... 119 3e-26 UniRef50_B8I014 Two component transcriptional regulator, winged ... 119 4e-26 UniRef50_P39663 Alkaline phosphatase synthesis transcriptional r... 119 4e-26 UniRef50_Q05943 Transcriptional regulatory protein glnR n=102 Ta... 119 4e-26 UniRef50_D2BG66 DNA-binding response regulator, two-component sy... 118 5e-26 UniRef50_B8FSL6 Two component transcriptional regulator, winged ... 118 6e-26 UniRef50_C6JFQ6 Putative uncharacterized protein n=1 Tax=Ruminoc... 117 7e-26 UniRef50_A7GKH0 Two component transcriptional regulator, winged ... 117 9e-26 UniRef50_A8FHC6 Response regulator n=3 Tax=Bacillus RepID=A8FHC6... 117 9e-26 UniRef50_C6LDL3 DNA-binding response regulator YycF n=2 Tax=Firm... 117 1e-25 UniRef50_C3KZU0 DNA-binding response regulator n=14 Tax=Firmicut... 117 1e-25 UniRef50_C9KKD5 Alkaline phosphatase synthesis transcriptional r... 117 1e-25 UniRef50_Q2BDN1 Two component transcriptional regulator, winged ... 117 1e-25 UniRef50_B2J8Q5 Two component transcriptional regulator, winged ... 116 2e-25 UniRef50_Q21EC1 Two component transcriptional regulator, winged ... 116 2e-25 UniRef50_B3QW38 Two component transcriptional regulator, winged ... 116 2e-25 UniRef50_B7GTW3 Response regulator receiver protein n=6 Tax=Bifi... 115 3e-25 UniRef50_A4J267 Two component transcriptional regulator, winged ... 115 3e-25 UniRef50_D2Q6K7 Response regulator-like transcriptional regulato... 115 4e-25 UniRef50_C8W6G9 Putative two component transcriptional regulator... 115 4e-25 UniRef50_A3I5H1 DNA-binding response regulator n=2 Tax=Bacillace... 115 4e-25 UniRef50_C6VLR9 Response regulator n=52 Tax=Firmicutes RepID=C6V... 115 5e-25 UniRef50_Q1IMA9 Two component transcriptional regulator, winged ... 115 6e-25 UniRef50_C1F3E6 Response regulator DrrA n=1 Tax=Acidobacterium c... 114 7e-25 UniRef50_A6EAJ4 Response regulator (CheY-like receiver domain an... 114 7e-25 UniRef50_Q67MV1 Two-component response regulator n=7 Tax=Clostri... 114 7e-25 UniRef50_Q03GZ5 DNA-binding response regulator, OmpR family (Rec... 114 9e-25 UniRef50_B8FYB6 Two component transcriptional regulator, winged ... 114 9e-25 UniRef50_Q38WB3 Two component system, response regulator n=58 Ta... 114 1e-24 UniRef50_B5Y819 DNA-binding response regulator YycF n=1 Tax=Copr... 114 1e-24 UniRef50_B1HYB3 DNA-binding response regulator n=2 Tax=Bacillace... 114 1e-24 UniRef50_P94413 Uncharacterized transcriptional regulatory prote... 114 1e-24 UniRef50_D2LZ20 Two component transcriptional regulator, winged ... 114 1e-24 UniRef50_C4L703 Two component transcriptional regulator, winged ... 114 1e-24 UniRef50_A9AYM0 Two component transcriptional regulator, winged ... 113 1e-24 UniRef50_C6XZP6 Response regulator receiver n=3 Tax=Sphingobacte... 113 2e-24 UniRef50_Q892Y1 Alkaline phosphatase synthesis transcriptional r... 113 2e-24 UniRef50_C3IWQ5 Two-component response regulator n=2 Tax=Bacillu... 113 2e-24 UniRef50_P72948 OmpR subfamily n=21 Tax=Bacteria RepID=P72948_SYNY3 113 2e-24 UniRef50_C7G9Y4 DNA-binding response regulator n=6 Tax=Bacteria ... 112 3e-24 UniRef50_A0LVZ4 Two component transcriptional regulator, winged ... 112 3e-24 UniRef50_Q9F868 Sensory transduction protein regX3 n=47 Tax=Bact... 112 3e-24 UniRef50_B8I272 Two component transcriptional regulator, winged ... 112 3e-24 UniRef50_O07130 Sensory transduction protein regX3 n=97 Tax=Acti... 112 3e-24 UniRef50_A7Z5A0 YvrH n=28 Tax=Firmicutes RepID=A7Z5A0_BACA2 112 3e-24 UniRef50_Q488W3 DNA-binding response regulator n=3 Tax=Alteromon... 112 4e-24 UniRef50_D1C683 Two component transcriptional regulator, winged ... 112 4e-24 UniRef50_B4U3Y8 Alkaline phosphatase synthesis transcriptional r... 112 4e-24 UniRef50_C6CSH8 Two component transcriptional regulator, winged ... 112 4e-24 UniRef50_B4WRK5 Response regulator receiver domain protein n=1 T... 112 4e-24 UniRef50_A7ZAG8 MrsR2 n=2 Tax=Bacillus RepID=A7ZAG8_BACA2 112 5e-24 UniRef50_A5UYZ0 Two component transcriptional regulator, winged ... 112 5e-24 UniRef50_C9KN64 DNA-binding response regulator VicR n=2 Tax=Mits... 111 5e-24 UniRef50_Q04N97 Response regulator n=6 Tax=Leptospira RepID=Q04N... 111 6e-24 UniRef50_C4L1R5 Two component transcriptional regulator, winged ... 111 6e-24 UniRef50_A0PXH1 Transcriptional regulatory protein n=11 Tax=Clos... 111 6e-24 UniRef50_Q067N9 Two component transcriptional regulator, winged ... 111 7e-24 UniRef50_C8WVL8 Two component transcriptional regulator, winged ... 111 7e-24 UniRef50_D2RD26 Transcriptional regulatory protein, C-terminal d... 111 7e-24 UniRef50_B5YEK3 Response regulator DrrA n=5 Tax=Bacteria RepID=B... 111 8e-24 UniRef50_B0TE19 Transcriptional regulator, putative n=1 Tax=Heli... 110 9e-24 UniRef50_UPI0001C164FC Two component Transcriptional regulator, ... 110 1e-23 UniRef50_C4Z0U9 Two-component system, OmpR family, phosphate reg... 110 1e-23 UniRef50_UPI00017F4CF5 two-component response regulator n=2 Tax=... 110 1e-23 UniRef50_C6CSM8 Two component transcriptional regulator, winged ... 110 1e-23 UniRef50_C4IFN3 Transcriptional regulator n=15 Tax=Bacteria RepI... 110 1e-23 UniRef50_A0KCT7 Two component transcriptional regulator, winged ... 110 2e-23 UniRef50_P42244 Uncharacterized transcriptional regulatory prote... 110 2e-23 UniRef50_A8ZYB8 Two component transcriptional regulator, winged ... 110 2e-23 UniRef50_A9CWP6 Putative response regulator n=1 Tax=Shewanella b... 110 2e-23 UniRef50_Q63F03 Response regulator n=15 Tax=Firmicutes RepID=Q63... 110 2e-23 UniRef50_C0Z8X3 Two-component response regulator n=3 Tax=Firmicu... 109 2e-23 UniRef50_UPI000050FEDE response regulator receiver protein n=1 T... 109 2e-23 UniRef50_D1YA87 Transcriptional regulatory protein, C-terminal d... 109 2e-23 UniRef50_A9KR75 Two component transcriptional regulator, winged ... 109 2e-23 UniRef50_Q2S3D0 Alkaline phosphatase synthesis transcriptional r... 109 3e-23 UniRef50_A5UPS1 Two component transcriptional regulator, winged ... 109 3e-23 UniRef50_C4W819 Two component transcriptional regulator, winged ... 109 3e-23 UniRef50_B7CCF4 Putative uncharacterized protein n=3 Tax=Firmicu... 109 3e-23 UniRef50_A8VSS8 Response regulator receiver protein n=1 Tax=Baci... 109 4e-23 UniRef50_A1HRL8 Two component transcriptional regulator, winged ... 109 4e-23 UniRef50_C6PZ92 Two component transcriptional regulator, winged ... 109 4e-23 UniRef50_Q3Z7C3 Transcriptional regulator, putative n=1 Tax=Deha... 109 4e-23 UniRef50_A1SKV6 Response regulator receiver n=7 Tax=Bacteria Rep... 109 4e-23 UniRef50_C6CZ95 Two component transcriptional regulator, winged ... 108 5e-23 UniRef50_A0Y0H8 DNA-binding response regulator n=1 Tax=Alteromon... 108 5e-23 UniRef50_A9AXY0 Two component transcriptional regulator, winged ... 108 6e-23 UniRef50_C6LD48 DNA-binding response regulator ResD n=1 Tax=Brya... 108 6e-23 UniRef50_C5D1A0 Two component transcriptional regulator, winged ... 108 7e-23 UniRef50_UPI0001692EE0 response regulator n=1 Tax=Paenibacillus ... 107 8e-23 UniRef50_B8G223 Two component transcriptional regulator, winged ... 107 8e-23 UniRef50_Q67RH7 Two-component response regulator n=1 Tax=Symbiob... 107 8e-23 UniRef50_B1YFK7 Two component transcriptional regulator, winged ... 107 8e-23 UniRef50_C0D8Y6 Putative uncharacterized protein n=3 Tax=Clostri... 107 8e-23 UniRef50_Q894P5 Transcriptional regulatory protein n=4 Tax=Clost... 107 1e-22 UniRef50_C9YME3 Two-component response regulator n=32 Tax=Firmic... 107 1e-22 UniRef50_C1XV31 Response regulator with CheY-like receiver domai... 107 1e-22 UniRef50_C3ALG3 Two-component response regulator n=5 Tax=Bacilla... 107 1e-22 UniRef50_Q24Q12 Putative uncharacterized protein n=1 Tax=Desulfi... 107 1e-22 UniRef50_C2W6L0 Two-component response regulator n=5 Tax=Firmicu... 107 1e-22 UniRef50_Q897D5 Two-component response regulator n=8 Tax=Clostri... 107 1e-22 UniRef50_C2EBW1 Two-component response regulator n=1 Tax=Lactoba... 107 1e-22 UniRef50_C2E0K8 Response regulator PhoP n=9 Tax=Lactobacillus Re... 107 1e-22 UniRef50_C0QG14 Response regulator, CheY-like receiver domain pr... 107 1e-22 UniRef50_Q3A924 DNA-binding response regulator n=3 Tax=Bacteria ... 106 2e-22 UniRef50_Q01RV3 Two component transcriptional regulator, winged ... 106 2e-22 UniRef50_C8WP93 Two component transcriptional regulator, winged ... 106 2e-22 UniRef50_A7WWQ5 Transcriptional regulatory protein walR n=685 Ta... 106 2e-22 UniRef50_C0WUJ3 Response regulator n=3 Tax=Lactobacillus RepID=C... 106 2e-22 UniRef50_D0AFB3 Putative uncharacterized protein n=4 Tax=Firmicu... 106 2e-22 UniRef50_Q97MA9 Response regulator (CheY domain, HTH domain) n=1... 106 2e-22 UniRef50_B2A1Z8 Two component transcriptional regulator, winged ... 106 2e-22 UniRef50_A1Z6C8 Response regulator receiver n=1 Tax=Sulfobacillu... 106 2e-22 UniRef50_UPI0001C425A1 two component transcriptional regulator, ... 106 3e-22 UniRef50_C4IAX3 DNA-binding response regulator n=1 Tax=Clostridi... 105 3e-22 UniRef50_Q0HYY3 Two component transcriptional regulator, winged ... 105 3e-22 UniRef50_Q2JED0 Two component transcriptional regulator, winged ... 105 4e-22 UniRef50_C7MNN6 Response regulator with CheY-like receiver domai... 105 4e-22 UniRef50_Q3Z7F8 Transcriptional regulator n=5 Tax=Dehalococcoide... 105 4e-22 UniRef50_A6LQJ3 Two component transcriptional regulator, winged ... 105 4e-22 UniRef50_A6LVN5 Two component transcriptional regulator, winged ... 105 4e-22 UniRef50_C7M2G6 Putative two component transcriptional regulator... 105 5e-22 UniRef50_C7N7W6 Response regulator with CheY-like receiver domai... 105 5e-22 UniRef50_B1C9A4 Putative uncharacterized protein n=1 Tax=Anaerof... 105 5e-22 UniRef50_B0TDB2 Two-component response regulator n=3 Tax=Bacteri... 105 6e-22 UniRef50_A9WLJ1 Two-component response regulator n=4 Tax=Actinom... 105 6e-22 UniRef50_B0S1J7 Two-component response regulator n=16 Tax=Clostr... 104 7e-22 UniRef50_Q5WGW1 Two-component response regulator n=1 Tax=Bacillu... 104 7e-22 UniRef50_C5CFK4 Two component transcriptional regulator, winged ... 104 7e-22 UniRef50_C4L0X3 Two component transcriptional regulator, winged ... 104 8e-22 UniRef50_B8IVD0 Two component transcriptional regulator, winged ... 104 8e-22 UniRef50_A6LXL2 Two component transcriptional regulator, winged ... 104 8e-22 UniRef50_Q26IA7 Transcriptional regulatory protein n=3 Tax=Bacte... 104 9e-22 UniRef50_B6FPY5 Putative uncharacterized protein (Fragment) n=1 ... 104 9e-22 UniRef50_C7ILM1 Two component transcriptional regulator, winged ... 104 9e-22 UniRef50_A9BR19 Two component transcriptional regulator, winged ... 104 1e-21 UniRef50_A6LXW1 Two component transcriptional regulator, winged ... 104 1e-21 UniRef50_B3E8G4 Two component transcriptional regulator, winged ... 104 1e-21 UniRef50_P45606 Phosphate regulon transcriptional regulatory pro... 104 1e-21 UniRef50_P0AA18 Transcriptional regulatory protein ompR n=242 Ta... 104 1e-21 UniRef50_C0W5Y5 Response regulator n=1 Tax=Actinomyces urogenita... 104 1e-21 UniRef50_B0MRC9 Putative uncharacterized protein n=1 Tax=Eubacte... 104 1e-21 UniRef50_A6BHI5 Putative uncharacterized protein n=1 Tax=Dorea l... 104 1e-21 UniRef50_C2EDI8 Response regulator n=11 Tax=Firmicutes RepID=C2E... 104 1e-21 UniRef50_Q0RNB1 Putative response regulator (Response regulator ... 104 1e-21 UniRef50_C4G2P7 Putative uncharacterized protein n=1 Tax=Abiotro... 103 1e-21 UniRef50_A9KHT5 Two component transcriptional regulator, winged ... 103 1e-21 UniRef50_A7ICZ4 Two component transcriptional regulator, winged ... 103 1e-21 UniRef50_A9AWM9 Two component transcriptional regulator, winged ... 103 2e-21 UniRef50_Q67J79 Two-component response regulator, CheY-like n=1 ... 103 2e-21 UniRef50_C8PCG6 DNA-binding response regulator n=1 Tax=Lactobaci... 103 2e-21 UniRef50_D0WJB9 Transcriptional regulator n=1 Tax=Slackia exigua... 103 2e-21 UniRef50_B2A0K7 Two component transcriptional regulator, winged ... 103 2e-21 UniRef50_C6IXU0 Transcriptional regulator domain-containing prot... 103 2e-21 UniRef50_A5UT44 Two component transcriptional regulator, winged ... 103 2e-21 UniRef50_C7I0W4 Two component transcriptional regulator, winged ... 103 2e-21 UniRef50_Q0AWC5 Response regulator receiver protein n=1 Tax=Synt... 103 2e-21 UniRef50_D2LY16 Two component transcriptional regulator, winged ... 103 2e-21 UniRef50_D1CA41 Two component transcriptional regulator, winged ... 103 2e-21 UniRef50_A7B4Z9 Putative uncharacterized protein n=2 Tax=Ruminoc... 103 2e-21 UniRef50_Q02A31 Two component transcriptional regulator, winged ... 102 2e-21 UniRef50_A4AL32 Putative two-component system response regulator... 102 3e-21 UniRef50_C7H5J1 Two-component system response regulator (Fragmen... 102 3e-21 UniRef50_Q1K367 Two component transcriptional regulator, winged ... 102 3e-21 UniRef50_A6LXP4 Two component transcriptional regulator, winged ... 102 3e-21 UniRef50_A5ZNL8 Putative uncharacterized protein n=3 Tax=Ruminoc... 102 3e-21 UniRef50_Q5WBT6 Two-component response regulator n=3 Tax=Bacilla... 102 3e-21 UniRef50_B2G959 Two-component response regulator n=13 Tax=Lactob... 102 3e-21 UniRef50_D0WFD8 DNA-binding response regulator VicR n=1 Tax=Slac... 102 3e-21 UniRef50_Q1DCL7 DNA-binding response regulator n=6 Tax=Cystobact... 102 4e-21 UniRef50_A5V0J0 Two component transcriptional regulator, winged ... 102 4e-21 UniRef50_D1BL25 Two component transcriptional regulator, winged ... 102 4e-21 UniRef50_C0CI50 Putative uncharacterized protein n=1 Tax=Blautia... 102 5e-21 UniRef50_C7N0N0 Response regulator with CheY-like receiver domai... 102 5e-21 UniRef50_Q01T10 Two component transcriptional regulator, winged ... 102 5e-21 UniRef50_C2D6V6 Possible response regulator n=1 Tax=Atopobium va... 102 5e-21 UniRef50_UPI000196AEE3 hypothetical protein CATMIT_00609 n=1 Tax... 102 5e-21 UniRef50_A4FEZ3 Two-component response regulator n=4 Tax=Bacteri... 102 5e-21 UniRef50_A6LVA4 Two component transcriptional regulator, winged ... 102 5e-21 UniRef50_Q38YC7 Two-component system, response regulator (Possib... 101 5e-21 UniRef50_B1JFX2 Two component transcriptional regulator, winged ... 101 5e-21 UniRef50_A8GAJ9 Two component transcriptional regulator, winged ... 101 6e-21 UniRef50_A9AVR8 Two component transcriptional regulator, winged ... 101 6e-21 UniRef50_C8QI30 Two component transcriptional regulator, winged ... 101 7e-21 UniRef50_B2V3E9 Transcriptional regulatory protein ResD n=5 Tax=... 101 7e-21 UniRef50_UPI0001C421AD two-component response regulator n=1 Tax=... 101 7e-21 UniRef50_C6VZ09 Two component transcriptional regulator, winged ... 101 7e-21 UniRef50_B2TJG9 Regulatory protein VanR n=6 Tax=Firmicutes RepID... 101 7e-21 UniRef50_C6C1C7 Two component transcriptional regulator, winged ... 101 7e-21 UniRef50_A5WBW4 Two component transcriptional regulator, winged ... 101 7e-21 UniRef50_B2A8D5 Two component transcriptional regulator, winged ... 101 7e-21 UniRef50_Q2N765 DNA-binding response regulator n=8 Tax=Proteobac... 101 8e-21 UniRef50_Q2BM87 DNA-binding response regulator n=1 Tax=Neptuniib... 101 8e-21 UniRef50_C7N5H9 Response regulator with CheY-like receiver domai... 101 8e-21 UniRef50_A8MLN3 Two component transcriptional regulator, winged ... 101 9e-21 UniRef50_B0TCF4 Two-component response regulator resd n=4 Tax=Fi... 101 9e-21 UniRef50_C9XMT9 Two-component response regulator n=94 Tax=Bacter... 100 9e-21 UniRef50_C6D6P8 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_A5N716 Transcriptional regulator n=15 Tax=Firmicutes Re... 100 1e-20 UniRef50_A8SR47 Putative uncharacterized protein n=2 Tax=Clostri... 100 1e-20 UniRef50_D2SFJ3 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_Q1AZL3 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_Q1AYG8 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_Q5SMC3 Response regulator n=4 Tax=Deinococci RepID=Q5SM... 100 1e-20 UniRef50_C6PCZ0 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_D1PMF3 DNA-binding response regulator RegX3 n=3 Tax=Clo... 100 1e-20 UniRef50_C2H8S4 Response regulator n=8 Tax=Enterococcus RepID=C2... 100 1e-20 UniRef50_B6FYV2 Putative uncharacterized protein n=1 Tax=Clostri... 100 1e-20 UniRef50_C9XR57 Two-component response regulator n=11 Tax=Clostr... 100 1e-20 UniRef50_D2QGK1 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_Q1J3D6 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_B4WME0 Response regulator receiver domain protein n=1 T... 100 1e-20 UniRef50_B0MNE2 Putative uncharacterized protein n=3 Tax=Firmicu... 100 1e-20 UniRef50_C0X3L2 Response regulator n=22 Tax=Enterococcus faecali... 100 1e-20 UniRef50_C0D765 Putative uncharacterized protein n=1 Tax=Clostri... 100 1e-20 UniRef50_Q2FY79 Transcriptional regulatory protein srrA n=168 Ta... 100 1e-20 UniRef50_A1SN97 Response regulator receiver n=41 Tax=Bacteria Re... 100 2e-20 UniRef50_Q5WKN6 Two-component response regulator n=2 Tax=Firmicu... 100 2e-20 UniRef50_B9YDA4 Putative uncharacterized protein n=1 Tax=Holdema... 100 2e-20 UniRef50_B2IIX2 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_Q49ZT8 Heme response regulator hssR n=7 Tax=Staphylococ... 100 2e-20 UniRef50_C6MYB5 DNA-binding response regulator n=2 Tax=Legionell... 100 2e-20 UniRef50_B8FQL7 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_A4E8P8 Putative uncharacterized protein n=3 Tax=Collins... 100 2e-20 UniRef50_C5D2L7 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_Q2S085 Response regulator DrrA n=1 Tax=Salinibacter rub... 100 2e-20 UniRef50_Q1J251 Two component transcriptional regulator PhoB n=5... 100 2e-20 UniRef50_C7T954 Two-component response regulator n=10 Tax=Lactob... 100 2e-20 UniRef50_C0WE14 Two-component system transcriptional regulator n... 100 2e-20 UniRef50_C0GHG5 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_Q3DDJ6 Phosphate regulon response regulator PhoB n=11 T... 100 2e-20 UniRef50_C0D2V9 Putative uncharacterized protein n=1 Tax=Clostri... 100 2e-20 UniRef50_Q2RUW2 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_D0MGI0 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_A4XGM2 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_B9CKZ5 Transcriptional regulator domain protein n=2 Tax... 100 2e-20 UniRef50_C6J6L0 Response regulator n=2 Tax=Bacillales RepID=C6J6... 100 3e-20 UniRef50_A4IPQ9 DNA-binding response regulator n=16 Tax=Bacillal... 99 3e-20 UniRef50_Q4ZUU7 Response regulator receiver:Transcriptional regu... 99 3e-20 UniRef50_B0N9X7 Putative uncharacterized protein n=2 Tax=Clostri... 99 3e-20 UniRef50_C0Z5U8 Two-component response regulator n=3 Tax=Firmicu... 99 4e-20 UniRef50_Q2SL72 Response regulator consisting of a CheY-like rec... 99 4e-20 UniRef50_B8FS97 Two component transcriptional regulator, winged ... 99 4e-20 UniRef50_B6WUI4 Putative uncharacterized protein n=1 Tax=Desulfo... 99 4e-20 UniRef50_C7TA80 Two-component response regulator n=2 Tax=Lactoba... 99 4e-20 UniRef50_B1ZQC8 Two component transcriptional regulator, winged ... 99 4e-20 UniRef50_B9XEM3 Two component transcriptional regulator, winged ... 99 4e-20 UniRef50_D2LRZ5 Two component transcriptional regulator, winged ... 99 5e-20 UniRef50_B8CXQ9 Two component transcriptional regulator, winged ... 99 5e-20 UniRef50_Q5NY91 Response regulator n=1 Tax=Aromatoleum aromaticu... 99 5e-20 UniRef50_Q7NGM9 Two-component response regulator n=1 Tax=Gloeoba... 99 5e-20 UniRef50_C6D5Y8 Putative two component transcriptional regulator... 99 5e-20 UniRef50_Q07HV3 Two component transcriptional regulator, winged ... 99 6e-20 UniRef50_A5CZK5 Response regulator n=3 Tax=Clostridiales RepID=A... 99 6e-20 UniRef50_Q6F7B5 Two-component response regulator n=55 Tax=Bacter... 99 6e-20 UniRef50_Q0SQL4 Two-component response regulator n=10 Tax=Firmic... 99 6e-20 UniRef50_C5VNC3 Alkaline phosphatase synthesis transcriptional r... 99 6e-20 UniRef50_Q2S514 Response regulator DrrA n=3 Tax=Rhodothermaceae ... 99 6e-20 UniRef50_D1C280 Two component transcriptional regulator, winged ... 99 6e-20 UniRef50_C1SP47 Response regulator with CheY-like receiver domai... 99 6e-20 UniRef50_Q5HR28 Response regulator saeR n=60 Tax=Staphylococcus ... 99 6e-20 UniRef50_P0A5Z5 DNA-binding response regulator mtrA n=76 Tax=Bac... 98 6e-20 UniRef50_Q0TNL1 DNA-binding response regulator n=8 Tax=Clostridi... 98 7e-20 UniRef50_A9ASF4 Two component transcriptional regulator, winged ... 98 7e-20 UniRef50_C5D3X1 Two component transcriptional regulator, winged ... 98 7e-20 UniRef50_Q2SNE0 Response regulator consisting of a CheY-like rec... 98 7e-20 UniRef50_A4J7U5 Two component transcriptional regulator, winged ... 98 7e-20 UniRef50_UPI00016988BE Two component Transcriptional regulator, ... 98 8e-20 UniRef50_C7N7D7 Response regulator with CheY-like receiver domai... 98 8e-20 UniRef50_Q21DY6 Phosphate regulon transcriptional regulatory pro... 98 8e-20 UniRef50_D2MMT6 Putative regulatory protein VanR n=1 Tax=Bulleid... 98 9e-20 UniRef50_UPI0001C36ECD response regulator n=1 Tax=Ruminococcus f... 98 9e-20 UniRef50_A5WB94 Two component transcriptional regulator, winged ... 98 9e-20 UniRef50_Q4ZQ24 Response regulator receiver:Transcriptional regu... 98 9e-20 UniRef50_A7GA24 DNA-binding response regulator n=10 Tax=Clostrid... 98 9e-20 UniRef50_D0MGG0 Two component transcriptional regulator, winged ... 98 9e-20 UniRef50_B5I213 Regulatory protein n=3 Tax=Streptomyces RepID=B5... 98 9e-20 UniRef50_Q1LHM7 Two component transcriptional regulator, winged ... 98 1e-19 UniRef50_C6AWS7 Two component transcriptional regulator, winged ... 98 1e-19 UniRef50_B9XFI9 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_C4KB06 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_Q1GLX1 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_A9VV65 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_D1CH01 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_B0NH75 Putative uncharacterized protein n=1 Tax=Clostri... 97 1e-19 UniRef50_B9CPY7 DNA-binding response regulator n=3 Tax=Staphyloc... 97 1e-19 UniRef50_A0RCN7 Two-component response regulator n=65 Tax=Bacill... 97 1e-19 UniRef50_A6G9H9 Two-component response regulator n=1 Tax=Plesioc... 97 1e-19 UniRef50_Q3AEH2 DNA-binding response regulator n=1 Tax=Carboxydo... 97 1e-19 UniRef50_A7HMZ4 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_A5IKU4 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_B2GF54 Two-component response regulator n=14 Tax=Lactob... 97 2e-19 UniRef50_UPI00017890B9 putative two component transcriptional re... 97 2e-19 UniRef50_B1ZLF1 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_Q8VTU3 Putative response regulator RR23 n=1 Tax=Listeri... 97 2e-19 UniRef50_C0WM98 Possible response regulator n=3 Tax=Lactobacillu... 97 2e-19 UniRef50_P54443 Uncharacterized transcriptional regulatory prote... 97 2e-19 UniRef50_A1SYE4 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_UPI000050FA0F putative two-component system response re... 97 2e-19 UniRef50_Q186H9 Two-component response regulator n=28 Tax=Bacter... 97 2e-19 UniRef50_C4L340 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_C9LC31 Regulatory protein VanR n=1 Tax=Blautia hansenii... 97 2e-19 UniRef50_Q2SPE2 Response regulator consisting of a CheY-like rec... 97 2e-19 UniRef50_D1BPS5 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_B1YK44 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_C8PDN3 DNA-binding response regulator n=1 Tax=Lactobaci... 97 2e-19 UniRef50_C6IVK1 Response regulator (Fragment) n=1 Tax=Paenibacil... 97 2e-19 UniRef50_D0KWS3 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_A8MFP9 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_B1KWY3 DNA-binding response regulator n=33 Tax=Firmicut... 97 2e-19 UniRef50_B1XM84 Two-component response regulator n=8 Tax=Cyanoba... 97 2e-19 UniRef50_UPI0001AEBD7C two component transcriptional regulator n... 97 2e-19 UniRef50_D0LUI4 Putative two component transcriptional regulator... 97 2e-19 UniRef50_A6TT79 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_Q04AR8 DNA-binding response regulator, OmpR family (Rec... 97 2e-19 UniRef50_B1YEH2 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_A7X5Y5 Heme response regulator hssR n=71 Tax=Bacillales... 97 2e-19 UniRef50_B8JG70 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_B7ILX3 DNA-binding response regulator n=102 Tax=Firmicu... 97 2e-19 UniRef50_Q3K1Z3 DNA-binding response regulator n=9 Tax=Bacteria ... 96 2e-19 UniRef50_A9KM61 Two component transcriptional regulator, winged ... 96 2e-19 UniRef50_C2V3X6 Two component transcriptional regulator, winged ... 96 2e-19 UniRef50_A9VUJ1 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_Q251C7 Putative uncharacterized protein n=1 Tax=Desulfi... 96 3e-19 UniRef50_A7HL55 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_A0PYF5 Two-component response regulator n=8 Tax=Firmicu... 96 3e-19 UniRef50_C6B8S5 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_Q01YI3 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_B8DS40 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_A8DJW5 Transcriptional regulatory protein n=1 Tax=Candi... 96 3e-19 UniRef50_UPI0001C31E43 two component transcriptional regulator, ... 96 3e-19 UniRef50_Q182M4 Two-component response regulator n=14 Tax=Clostr... 96 3e-19 UniRef50_C1D266 Putative response regulator, OmpR n=1 Tax=Deinoc... 96 3e-19 UniRef50_Q4HSL5 Phosphate regulon response regulator PhoB n=3 Ta... 96 3e-19 UniRef50_A5N471 VanR n=21 Tax=Bacteria RepID=A5N471_CLOK5 96 3e-19 UniRef50_A6TKQ5 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_P35163 Transcriptional regulatory protein resD n=162 Ta... 96 3e-19 UniRef50_A0RK71 DNA-binding response regulator n=69 Tax=Bacillus... 96 3e-19 UniRef50_C1I3L5 Alkaline phosphatase synthesis transcriptional r... 96 4e-19 UniRef50_A1R850 DNA-binding response regulator n=45 Tax=Actinoba... 96 4e-19 UniRef50_C7H3Q1 KDP operon transcriptional regulatory protein Kd... 96 4e-19 UniRef50_C7LSY9 Two component transcriptional regulator, winged ... 96 4e-19 UniRef50_C9ZHF5 Putative regulatory protein n=6 Tax=Streptomyces... 96 4e-19 UniRef50_UPI0001C42B3F two component transcriptional regulator, ... 96 5e-19 UniRef50_Q12T20 Two component transcriptional regulator, winged ... 96 5e-19 UniRef50_C7H8D4 Two-component response regulator n=12 Tax=Bacter... 96 5e-19 UniRef50_A6TM13 Two component transcriptional regulator, winged ... 96 5e-19 UniRef50_A1B7Z0 Two component transcriptional regulator, winged ... 96 5e-19 UniRef50_D1VT63 Regulatory protein VanR n=1 Tax=Peptoniphilus la... 96 5e-19 UniRef50_A6M2A3 Two component transcriptional regulator, winged ... 96 5e-19 UniRef50_A6X2C4 Two component transcriptional regulator, winged ... 95 5e-19 UniRef50_B2V706 Two component transcriptional regulator, winged ... 95 5e-19 UniRef50_B1WRX4 Two component transcriptional regulator n=11 Tax... 95 6e-19 UniRef50_UPI0001C379A1 regulatory protein VanR n=1 Tax=Ruminococ... 95 6e-19 UniRef50_Q07HK8 Two component transcriptional regulator, winged ... 95 6e-19 UniRef50_Q2JPV2 DNA-binding response regulator n=17 Tax=Bacteria... 95 7e-19 UniRef50_O78428 Probable transcriptional regulator ycf27 n=18 Ta... 95 7e-19 UniRef50_B2TI09 Two-component response regulator n=3 Tax=Clostri... 95 7e-19 UniRef50_C9KL69 DNA-binding response regulator ArlR n=1 Tax=Mits... 95 7e-19 UniRef50_B1YJZ1 Two component transcriptional regulator, winged ... 95 7e-19 UniRef50_C8WJL3 Two component transcriptional regulator, winged ... 95 7e-19 UniRef50_D0WLW8 DNA-binding response regulator RegX3 n=1 Tax=Act... 95 7e-19 UniRef50_Q3KAS5 Two-component system, response regulator n=2 Tax... 95 7e-19 UniRef50_C5ENX8 Two-component response regulator n=2 Tax=Clostri... 95 7e-19 UniRef50_B6BN62 Two-component system response regulator n=1 Tax=... 95 8e-19 UniRef50_A4CEI9 Transcriptional regulatory protein RstA n=3 Tax=... 95 8e-19 UniRef50_P45189 Phosphate regulon transcriptional regulatory pro... 95 8e-19 UniRef50_D1U371 Two component transcriptional regulator, winged ... 95 8e-19 UniRef50_C4Z2E0 Two-component system, OmpR family, phosphate reg... 95 9e-19 UniRef50_B8I717 Two component transcriptional regulator, winged ... 95 9e-19 UniRef50_Q04VZ3 Response regulator n=6 Tax=Leptospira RepID=Q04V... 94 9e-19 UniRef50_A5G0J5 Two component transcriptional regulator, winged ... 94 9e-19 UniRef50_B8G869 Two component transcriptional regulator, winged ... 94 9e-19 UniRef50_C3WCS3 Two-component system response regulator n=4 Tax=... 94 9e-19 UniRef50_C0C3P9 Putative uncharacterized protein n=1 Tax=Clostri... 94 9e-19 UniRef50_A6T3B9 Two components system response regulator n=48 Ta... 94 1e-18 UniRef50_A6CG62 Two-component response regulator n=1 Tax=Plancto... 94 1e-18 UniRef50_C7I0A5 Two component transcriptional regulator PhoB, wi... 94 1e-18 UniRef50_C9XRU4 Two-component system response regulator n=12 Tax... 94 1e-18 UniRef50_B5JD22 Response regulator receiver domain protein n=1 T... 94 1e-18 UniRef50_O34903 Uncharacterized transcriptional regulatory prote... 94 1e-18 UniRef50_C9XSY6 Two-component response regulator n=15 Tax=Firmic... 94 1e-18 UniRef50_D0LLH3 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_A6NWH9 Putative uncharacterized protein n=2 Tax=Bactero... 94 1e-18 UniRef50_Q398T9 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_B2TMR2 Transcriptional regulatory protein ResD n=1 Tax=... 94 1e-18 UniRef50_C1ZG07 Response regulator with CheY-like receiver domai... 94 1e-18 UniRef50_Q8ESP1 Two-component response regulator n=1 Tax=Oceanob... 94 1e-18 UniRef50_Q3A190 Two component signal transduction response regul... 94 1e-18 UniRef50_A9G298 Two-component response regulator n=1 Tax=Sorangi... 94 1e-18 UniRef50_C7NK44 Response regulator with CheY-like receiver domai... 94 1e-18 UniRef50_B0G7M7 Putative uncharacterized protein n=2 Tax=Clostri... 94 1e-18 UniRef50_UPI000196BAD1 hypothetical protein CATMIT_00504 n=1 Tax... 94 1e-18 UniRef50_C0Z621 Two-component response regulator n=5 Tax=Firmicu... 94 1e-18 UniRef50_C6D0P6 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_B8IM29 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_P51358 Probable transcriptional regulator ycf27 n=96 Ta... 94 1e-18 UniRef50_B8G179 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_A6LZK7 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_A9KP45 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_A0L7S7 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_A5WHF9 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_C8SEM3 Two component transcriptional regulator, winged ... 94 2e-18 UniRef50_C8PVM6 Putative transcriptional regulator OmpR n=1 Tax=... 94 2e-18 UniRef50_C6NV64 Two component transcriptional regulator, winged ... 94 2e-18 UniRef50_B3DZZ9 DNA-binding response regulator, OmpR family (REC... 94 2e-18 UniRef50_B2TJU3 Regulatory protein VanR n=9 Tax=Firmicutes RepID... 94 2e-18 UniRef50_C0ZH45 Two-component response regulator n=2 Tax=Bacilla... 94 2e-18 UniRef50_A7BVU1 DNA-binding response regulator PhoB n=1 Tax=Begg... 94 2e-18 UniRef50_Q9KAM3 Two-component response regulator n=1 Tax=Bacillu... 94 2e-18 UniRef50_B6FSP5 Putative uncharacterized protein n=1 Tax=Clostri... 94 2e-18 UniRef50_B6IYL9 Two-component response regulator GltR n=1 Tax=Rh... 93 2e-18 UniRef50_Q1GXN5 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_A8SVV6 Putative uncharacterized protein n=1 Tax=Coproco... 93 2e-18 UniRef50_B8HQE6 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_B1WXJ7 Two-component response regulator n=2 Tax=Chrooco... 93 2e-18 UniRef50_C6QDD0 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_C0BVZ7 Putative uncharacterized protein n=2 Tax=Clostri... 93 2e-18 UniRef50_Q44929 Response regulator gtcR n=8 Tax=Firmicutes RepID... 93 2e-18 UniRef50_B7K5A2 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_C7IFX1 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_C9Y9A3 Transcriptional regulatory protein ompR n=1 Tax=... 93 2e-18 UniRef50_C1YUF6 Response regulator with CheY-like receiver domai... 93 2e-18 UniRef50_B9E984 Putative uncharacterized protein n=1 Tax=Macroco... 93 2e-18 UniRef50_A4SZ97 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_UPI0001C35F78 two-component response regulator n=1 Tax=... 93 2e-18 UniRef50_Q0TP36 DNA-binding response regulator n=142 Tax=Bacteri... 93 3e-18 UniRef50_C7LNV6 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_Q21BK9 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_C8X3Y5 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_A3ERN0 Putative two component transcriptional regulator... 93 3e-18 UniRef50_C9YCY7 Transcriptional regulatory protein ompR n=1 Tax=... 93 3e-18 UniRef50_A0L527 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_A4J2J4 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_Q0ASG1 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_B5EQN9 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_C1IA20 Two-component system response regulator n=1 Tax=... 93 3e-18 UniRef50_B4CW77 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_B2TJI4 Regulatory protein VanR n=4 Tax=Clostridiales Re... 93 3e-18 UniRef50_C6CWW2 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_B1QW07 Regulatory protein VanR n=6 Tax=Clostridiales Re... 93 3e-18 UniRef50_A7GIT8 DNA-binding response regulator n=11 Tax=Clostrid... 92 3e-18 UniRef50_A6FSM2 Probable two-component response regulator protei... 92 4e-18 UniRef50_C3RMH7 Signal transduction regulator n=8 Tax=Bacteria R... 92 4e-18 UniRef50_B3DXI2 Phosphate regulon transcriptional regulatory pro... 92 4e-18 UniRef50_P23620 Phosphate regulon transcriptional regulatory pro... 92 4e-18 UniRef50_B8H4H9 Two-component response regulator protein n=9 Tax... 92 4e-18 UniRef50_B1IEF4 Regulatory protein VanR n=17 Tax=Firmicutes RepI... 92 4e-18 UniRef50_B7CCX3 Putative uncharacterized protein n=1 Tax=Eubacte... 92 4e-18 UniRef50_Q3A7S2 Putative two component response regulator n=1 Ta... 92 4e-18 UniRef50_B1ZTF2 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_A9BP99 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_C9RLA0 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_B4WSE4 Response regulator receiver domain protein n=1 T... 92 4e-18 UniRef50_B6BWN6 Two component transcriptional regulator, winged ... 92 5e-18 UniRef50_B7JF46 DNA-binding response regulator n=87 Tax=Bacteria... 92 5e-18 UniRef50_UPI0001C37B2E two component transcriptional regulator n... 92 5e-18 UniRef50_B8G7R1 Two component transcriptional regulator, winged ... 92 5e-18 UniRef50_C7N1J8 Response regulator with CheY-like receiver domai... 92 5e-18 UniRef50_A9KGK4 Phosphate regulon transcriptional regulatory pro... 92 5e-18 UniRef50_C6BIK6 Two component transcriptional regulator, winged ... 92 5e-18 UniRef50_C7NFF7 Response regulator with CheY-like receiver domai... 92 5e-18 UniRef50_Q04942 Transcriptional regulatory protein afsQ1 n=34 Ta... 92 5e-18 UniRef50_B1VZK5 Putative transcriptional regulator n=8 Tax=Strep... 92 5e-18 UniRef50_C6D3C2 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_D1X187 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_A6M0T3 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_B1Y714 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_A6W3G3 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_Q2W3Z2 Response regulator consisting of a CheY-like rec... 92 6e-18 UniRef50_C3M7Y9 Transcriptional regulator n=27 Tax=Vibrionaceae ... 92 6e-18 UniRef50_C9RRV7 Two component transcriptional regulator, winged ... 92 7e-18 UniRef50_C0ZDC3 Two-component response regulator n=1 Tax=Breviba... 92 7e-18 UniRef50_Q5KTV1 Putative uncharacterized protein n=1 Tax=Staphyl... 92 7e-18 UniRef50_C7QI13 Two component transcriptional regulator, winged ... 92 7e-18 UniRef50_B0G2J4 Putative uncharacterized protein n=1 Tax=Dorea f... 92 7e-18 UniRef50_Q8RBP2 Response regulators consisting of a CheY-like re... 91 8e-18 UniRef50_P0A9Q3 Aerobic respiration control protein arcA n=222 T... 91 8e-18 UniRef50_C6HUL5 Two component transcriptional regulator, winged ... 91 8e-18 UniRef50_D2LRZ1 Two component transcriptional regulator, winged ... 91 8e-18 UniRef50_P52108 Transcriptional regulatory protein rstA n=163 Ta... 91 8e-18 UniRef50_C7N192 Response regulator with CheY-like receiver domai... 91 8e-18 UniRef50_C6PQ36 Two component transcriptional regulator, winged ... 91 8e-18 UniRef50_A8ZSJ7 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_UPI0001787D57 two component transcriptional regulator, ... 91 9e-18 UniRef50_C0Z911 Two-component response regulator n=4 Tax=Firmicu... 91 9e-18 UniRef50_C6RFL7 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_B8FI17 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_B1C9W9 Putative uncharacterized protein n=1 Tax=Anaerof... 91 1e-17 UniRef50_Q0IC97 DNA-binding response regulator n=3 Tax=Synechoco... 91 1e-17 UniRef50_Q52990 Phosphate regulon transcriptional regulatory pro... 91 1e-17 UniRef50_Q01N64 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_C7LZ74 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_Q2T1W7 DNA-binding response regulator n=22 Tax=Proteoba... 91 1e-17 UniRef50_C4L1Q9 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_Q3KB13 Two component Transcriptional regulator, Winged ... 91 1e-17 UniRef50_D1C5Q5 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_A4X6U8 Transcriptional regulator domain protein n=4 Tax... 91 1e-17 UniRef50_C1I9Y7 Two component transcriptional regulator n=1 Tax=... 91 1e-17 UniRef50_C6D0Z2 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_D1XII5 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_Q1GKH2 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_C8P1C0 Regulatory protein VanR n=1 Tax=Erysipelothrix r... 91 1e-17 UniRef50_B2TIW8 Alkaline phosphatase synthesis transcriptional r... 91 2e-17 UniRef50_C8VYB2 Two component transcriptional regulator, winged ... 91 2e-17 UniRef50_C9LLD5 DNA-binding response regulator ResD n=1 Tax=Dial... 91 2e-17 UniRef50_C8WK97 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_C6X1B3 Phosphate regulon transcriptional regulatory pro... 90 2e-17 UniRef50_B2HJN8 Transcriptional regulatory protein n=15 Tax=Myco... 90 2e-17 UniRef50_A6DFF3 DNA-binding response regulator n=2 Tax=Lentispha... 90 2e-17 UniRef50_Q0K0A7 Response regulator, OmpR-family n=9 Tax=Bacteria... 90 2e-17 UniRef50_Q82EB1 Transcriptional regulatory protein cseB n=29 Tax... 90 2e-17 UniRef50_B8HDW6 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_B8FLX7 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_A3NL94 DNA-binding response regulator n=27 Tax=pseudoma... 90 2e-17 UniRef50_C6LEL9 DNA-binding response regulator RegX3 n=3 Tax=Clo... 90 2e-17 UniRef50_A5F0A5 Transcriptional regulator n=77 Tax=Proteobacteri... 90 2e-17 UniRef50_Q026B5 Two component heavy metal response transcription... 90 2e-17 UniRef50_Q03AM3 DNA-binding response regulator, OmpR family (Rec... 90 2e-17 UniRef50_A7BNW6 Two component response regulator n=1 Tax=Beggiat... 90 2e-17 UniRef50_C4Z7A3 Two-component system, OmpR family, response regu... 90 2e-17 UniRef50_Q06239 Regulatory protein vanR n=26 Tax=Firmicutes RepI... 90 2e-17 UniRef50_B9L1T3 Phosphate regulatory protein n=1 Tax=Thermomicro... 90 2e-17 UniRef50_B0CFF1 Two-component transcriptional regulator n=7 Tax=... 90 2e-17 UniRef50_A7K1J9 DNA-binding response regulator n=13 Tax=Vibriona... 90 2e-17 UniRef50_B0TF57 Transcriptional regulator, putative n=1 Tax=Heli... 90 2e-17 UniRef50_C7NAQ8 Two component transcriptional regulator, winged ... 90 3e-17 UniRef50_D0WIB8 DNA-binding response regulator VicR n=1 Tax=Slac... 90 3e-17 UniRef50_C9L5Y5 Regulatory protein VanR n=1 Tax=Blautia hansenii... 90 3e-17 UniRef50_B6JIF2 DNA-binding response regulator OmpR n=1 Tax=Olig... 90 3e-17 UniRef50_A0RL52 DNA-binding response regulator n=93 Tax=Firmicut... 90 3e-17 UniRef50_A9AYH1 Two component transcriptional regulator, winged ... 90 3e-17 UniRef50_B7K6Q7 Two component transcriptional regulator, winged ... 90 3e-17 UniRef50_A4X1M5 Two component transcriptional regulator, winged ... 90 3e-17 UniRef50_C3JQ04 Transcriptional regulatory protein n=2 Tax=Rhodo... 90 3e-17 UniRef50_C5QMK0 Hemin DNA-binding response regulator n=3 Tax=Bac... 89 3e-17 UniRef50_B1XXD9 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_A5MZ62 Transcriptional regulator n=27 Tax=Bacteria RepI... 89 3e-17 UniRef50_UPI0001C4272B hypothetical protein BpOF4_20304 n=2 Tax=... 89 3e-17 UniRef50_A4EGJ5 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_C1XS75 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_C0BXI5 Putative uncharacterized protein n=2 Tax=Clostri... 89 3e-17 UniRef50_C9XSJ2 Two-component response regulator n=15 Tax=Clostr... 89 3e-17 UniRef50_C0ZIT9 Two-component response regulator n=2 Tax=Bacilla... 89 3e-17 UniRef50_Q0KAU9 Response regulator, OmpR-family n=1 Tax=Ralstoni... 89 3e-17 UniRef50_B8IGE5 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_C4L2J9 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_B0S0W9 Two-component response regulator n=9 Tax=Clostri... 89 3e-17 UniRef50_C9RQT3 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_A7BB43 Putative uncharacterized protein n=2 Tax=Actinom... 89 4e-17 UniRef50_UPI0001C37682 two component transcriptional regulator n... 89 4e-17 UniRef50_C8WRL2 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_C7MP89 Response regulator with CheY-like receiver domai... 89 4e-17 UniRef50_B3WB53 Response regulator n=35 Tax=Bacilli RepID=B3WB53... 89 4e-17 UniRef50_C6NVH5 Phosphate regulon transcriptional regulatory pro... 89 4e-17 UniRef50_C0YPJ5 DNA-binding response regulator n=1 Tax=Chryseoba... 89 4e-17 UniRef50_A9G6M8 Two-component response regulator n=1 Tax=Sorangi... 89 4e-17 UniRef50_D1SG74 Putative two component transcriptional regulator... 89 4e-17 UniRef50_A6TL65 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_Q02BS1 Response regulator receiver protein n=1 Tax=Cand... 89 4e-17 UniRef50_A8VQC0 Response regulator receiver protein n=2 Tax=Baci... 89 4e-17 UniRef50_C8P150 Regulatory protein VanR n=1 Tax=Erysipelothrix r... 89 4e-17 UniRef50_C9XRL7 Two-component response regulator n=4 Tax=Clostri... 89 4e-17 UniRef50_Q47ZA2 DNA-binding response regulator n=20 Tax=Alteromo... 89 4e-17 UniRef50_C7N3P4 Response regulator with CheY-like receiver domai... 89 4e-17 UniRef50_A4G2G5 Phosphate regulon transcriptional regulatory pro... 89 5e-17 UniRef50_B2XT10 Transcriptional regulatory protein 1 n=3 Tax=Het... 89 5e-17 UniRef50_C8WIG3 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_Q7UPW2 Two-component response regulator n=1 Tax=Rhodopi... 89 5e-17 UniRef50_B6QXV6 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_C7H3P4 DNA-binding response regulator SrrA n=1 Tax=Faec... 89 6e-17 UniRef50_B0C620 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_A0LPJ2 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_D1CG76 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_C4ZP42 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_Q3DCX6 DNA-binding response regulator n=7 Tax=Streptoco... 88 6e-17 UniRef50_C6WE10 Putative two component transcriptional regulator... 88 6e-17 UniRef50_C0ET35 Putative uncharacterized protein n=1 Tax=Eubacte... 88 6e-17 UniRef50_A4FGQ8 Putative uncharacterized protein n=1 Tax=Sacchar... 88 7e-17 UniRef50_C7PII2 Two component transcriptional regulator, winged ... 88 7e-17 UniRef50_B4U9M6 Two component transcriptional regulator, winged ... 88 7e-17 UniRef50_A7GEN9 DNA-binding response regulator n=18 Tax=Firmicut... 88 7e-17 UniRef50_Q1YN14 Putative transcriptional regulator n=1 Tax=Auran... 88 7e-17 UniRef50_B7HUH0 DNA-binding response regulator n=65 Tax=Firmicut... 88 8e-17 UniRef50_Q2S740 Response regulator consisting of a CheY-like rec... 88 8e-17 UniRef50_A6WIX6 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_C4LLE8 Two-component system, response regulator n=19 Ta... 88 8e-17 UniRef50_Q0IAU4 Two-component response regulator n=1 Tax=Synecho... 88 8e-17 UniRef50_C1SI97 Response regulator with CheY-like receiver domai... 88 8e-17 UniRef50_C4ZFF8 DNA-binding response regulator n=60 Tax=Bacteria... 88 8e-17 UniRef50_D1VT61 Regulatory protein VanR n=1 Tax=Peptoniphilus la... 88 8e-17 UniRef50_C0CKG8 Putative uncharacterized protein n=1 Tax=Blautia... 88 8e-17 UniRef50_UPI0001C318D2 two component transcriptional regulator, ... 88 9e-17 UniRef50_C8WRL6 Two component transcriptional regulator, winged ... 88 9e-17 UniRef50_B8GBX2 Two component transcriptional regulator, winged ... 88 9e-17 UniRef50_Q97FK2 Response regulator (CheY-like receiver domain an... 88 1e-16 UniRef50_C3RJ29 Response regulator gtcR n=2 Tax=Bacteria RepID=C... 88 1e-16 UniRef50_D2R142 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_Q88HA6 Transcriptional regulatory protein RstA, putativ... 88 1e-16 UniRef50_P07545 Regulatory protein virG n=21 Tax=cellular organi... 88 1e-16 UniRef50_B4U9Z2 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_Q63CK0 Response regulator n=95 Tax=Firmicutes RepID=Q63... 88 1e-16 UniRef50_B0ACA3 Putative uncharacterized protein n=1 Tax=Clostri... 88 1e-16 UniRef50_C6J181 Two-component system response regulator n=1 Tax=... 88 1e-16 UniRef50_Q5ZRW6 DNA-binding response regulator n=6 Tax=Legionell... 87 1e-16 UniRef50_B7IIP6 Transcriptional regulatory protein ResD n=34 Tax... 87 1e-16 UniRef50_Q2P1E0 VirG-like two component response regulator n=13 ... 87 1e-16 UniRef50_B0P738 Putative uncharacterized protein n=1 Tax=Anaerot... 87 1e-16 UniRef50_C0ZDJ8 Two-component response regulator n=5 Tax=Firmicu... 87 1e-16 UniRef50_A9FZS4 Response regulator n=2 Tax=Myxococcales RepID=A9... 87 1e-16 UniRef50_C3X860 Response regulator receiver protein n=2 Tax=Oxal... 87 1e-16 UniRef50_A6TSH7 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_B0MTN6 Putative uncharacterized protein n=1 Tax=Alistip... 87 1e-16 UniRef50_UPI0001C355EA transcriptional regulator n=1 Tax=Clostri... 87 1e-16 UniRef50_B8HEE3 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_B1ZS16 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_A7GB96 DNA-binding response regulator n=16 Tax=Bacteria... 87 2e-16 UniRef50_C7TGP3 Two-component response regulator n=8 Tax=Lactoba... 87 2e-16 UniRef50_UPI0001C32387 two component transcriptional regulator, ... 87 2e-16 UniRef50_C1A8B6 OmpR family two-component response regulator n=1... 87 2e-16 UniRef50_Q030C5 DNA-binding response regulator, OmpR family (Rec... 87 2e-16 UniRef50_A1S1W0 Response regulator receiver protein n=1 Tax=Shew... 87 2e-16 UniRef50_UPI00019732E7 DNA-binding response regulator n=1 Tax=Cl... 87 2e-16 UniRef50_Q187R8 Two-component response regulator n=6 Tax=Clostri... 87 2e-16 UniRef50_D0LJX0 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_A6VRR3 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_B7JEB2 Alkaline phosphatase synthesis transcriptional r... 87 2e-16 UniRef50_A1VSF0 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_Q189I8 Two-component response regulator n=5 Tax=Clostri... 87 2e-16 UniRef50_D1AFR9 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_C9XJX9 Two-component system response regulator n=108 Ta... 87 2e-16 UniRef50_Q1AXX7 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_A5GA68 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_B1XPE6 Two-component response regulator; transcriptiona... 87 2e-16 UniRef50_B2V7Q1 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_B1HT37 Transcriptional regulatory protein srrA (Staphyl... 86 3e-16 UniRef50_D1CTN9 Phosphate regulon two component response regulat... 86 3e-16 UniRef50_C4RMB5 Two-component system response regulator n=1 Tax=... 86 3e-16 UniRef50_Q1NA75 DNA-binding response regulator n=3 Tax=Alphaprot... 86 3e-16 UniRef50_C1SGQ1 Response regulator with CheY-like receiver domai... 86 3e-16 UniRef50_A3W0Y1 DNA-binding response regulator TorR n=2 Tax=Rose... 86 3e-16 UniRef50_C7PP48 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_Q631U4 Response regulator n=1 Tax=Bacillus cereus E33L ... 86 3e-16 UniRef50_D1VK99 Putative two component transcriptional regulator... 86 3e-16 UniRef50_A6L7N3 Two-component system response regulator n=9 Tax=... 86 3e-16 UniRef50_Q188S4 Putative lantibiotic resistance two-component re... 86 3e-16 UniRef50_C4KYM3 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_B2IER4 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_B1YLJ6 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_A9AUH9 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_A5Z504 Putative uncharacterized protein n=5 Tax=Clostri... 86 4e-16 UniRef50_A1U3N6 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_C6LJU9 Two-component response regulator for energy tran... 86 4e-16 UniRef50_C3XKF1 DNA-binding response regulator n=4 Tax=Campyloba... 86 4e-16 UniRef50_A1ULT5 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_A3CKZ7 Two-component response transcriptional regulator... 86 4e-16 UniRef50_P0A5Z7 Transcriptional regulatory protein prrA n=41 Tax... 86 4e-16 UniRef50_A5N8U3 Transcriptional regulator n=3 Tax=Clostridium Re... 86 4e-16 UniRef50_D0Z2F0 DNA-binding response regulator n=1 Tax=Photobact... 86 4e-16 UniRef50_C6LFN3 DNA-binding response regulator ResD n=21 Tax=Bac... 86 4e-16 UniRef50_UPI0001C37170 two component transcriptional regulator, ... 86 4e-16 UniRef50_UPI0001C3717E DNA-binding response regulator n=1 Tax=Ru... 86 4e-16 UniRef50_Q2NZ71 Two-component system regulatory protein n=18 Tax... 86 4e-16 UniRef50_C1A710 OmpR family two-component response regulator n=1... 86 5e-16 UniRef50_B5EH76 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_C6JBE6 Putative uncharacterized protein n=1 Tax=Ruminoc... 86 5e-16 UniRef50_D1A718 Putative two component transcriptional regulator... 86 5e-16 UniRef50_A7GLY2 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_Q6MA20 Putative two-component response regulator phoP n... 86 5e-16 UniRef50_D1BX45 Two component transcriptional regulator, winged ... 85 5e-16 UniRef50_A4X7Q0 Response regulator receiver n=46 Tax=Actinomycet... 85 5e-16 UniRef50_D1VIP6 Two component transcriptional regulator, winged ... 85 5e-16 UniRef50_A9BP07 Two component transcriptional regulator, winged ... 85 6e-16 UniRef50_B1HXG4 DNA-binding response regulator n=2 Tax=Bacillace... 85 6e-16 UniRef50_B6R2K8 Two component transcriptional regulator, winged ... 85 6e-16 UniRef50_A9D5A2 Osmolarity response regulator n=1 Tax=Hoeflea ph... 85 6e-16 UniRef50_B0RZK9 Two-component response regulator n=2 Tax=Finegol... 85 6e-16 UniRef50_P31079 Protein petR n=50 Tax=Alphaproteobacteria RepID=... 85 7e-16 UniRef50_B3QUP3 Two component transcriptional regulator, winged ... 85 7e-16 UniRef50_A8EX60 Two-component response regulator n=2 Tax=Epsilon... 85 7e-16 UniRef50_C6D1N2 Two component transcriptional regulator, winged ... 85 7e-16 UniRef50_C7R7C9 Two component transcriptional regulator, winged ... 85 7e-16 UniRef50_C9B9W7 Transcriptional regulator n=12 Tax=cellular orga... 85 7e-16 UniRef50_C6J108 Multi-component transcriptional regulator n=2 Ta... 85 8e-16 UniRef50_A6M1X5 Two component transcriptional regulator, winged ... 85 8e-16 UniRef50_C6LCG6 Phosphate regulon transcriptional regulatory pro... 85 8e-16 UniRef50_A5VEY8 Two component transcriptional regulator, winged ... 85 8e-16 UniRef50_A7VFQ8 Putative uncharacterized protein n=2 Tax=Clostri... 85 8e-16 UniRef50_Q0F0D6 Response regulator in two-component regulatory s... 85 9e-16 UniRef50_Q47744 Regulatory protein vanRB n=13 Tax=Bacteria RepID... 85 9e-16 UniRef50_B0G6A2 Putative uncharacterized protein n=2 Tax=Lachnos... 85 9e-16 UniRef50_B6ITF9 TorCAD operon transcriptional regulatory protein... 85 9e-16 UniRef50_UPI0001B559F0 two-component system, response regulator ... 84 9e-16 UniRef50_B8DZ94 Two component transcriptional regulator, winged ... 84 9e-16 UniRef50_Q3JG93 Response regulator protein n=61 Tax=Proteobacter... 84 9e-16 UniRef50_C6JLS2 DNA-binding response regulator n=2 Tax=Fusobacte... 84 9e-16 UniRef50_C2Z9H3 DNA-binding response regulator n=4 Tax=Bacillace... 84 1e-15 UniRef50_A6BKE3 Putative uncharacterized protein n=3 Tax=Clostri... 84 1e-15 UniRef50_C8UTJ5 Two-component response regulator n=9 Tax=Lactoba... 84 1e-15 UniRef50_B6FMI5 Putative uncharacterized protein n=7 Tax=Clostri... 84 1e-15 UniRef50_A9DQD6 Probable two-component response regulator protei... 84 1e-15 UniRef50_C6J4Z6 Two component transcriptional regulator n=1 Tax=... 84 1e-15 UniRef50_B8FY05 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A5ZPI0 Putative uncharacterized protein n=6 Tax=Bacteri... 84 1e-15 UniRef50_A9ANV0 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A1VB66 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_C3WA46 Two-component response regulator n=6 Tax=Fusobac... 84 1e-15 UniRef50_C3WHY2 Two-component response regulator n=8 Tax=Fusobac... 84 1e-15 UniRef50_A7HP70 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_C7N3P1 Response regulator with CheY-like receiver domai... 84 1e-15 UniRef50_Q3ZVS3 DNA-binding response regulator n=4 Tax=Dehalococ... 84 1e-15 UniRef50_Q2W7N7 Putative uncharacterized protein n=1 Tax=Magneto... 84 1e-15 UniRef50_Q3A1Q2 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_Q2JAC4 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_C0QDS5 Two-component response regulator (OmpR-like prot... 84 1e-15 UniRef50_C6LDQ2 DNA-binding response regulator YycF n=1 Tax=Brya... 84 1e-15 UniRef50_A9H3V0 Two component Transcriptional regulator n=96 Tax... 84 1e-15 UniRef50_C4WPH5 Two component response regulator n=3 Tax=Rhizobi... 84 1e-15 UniRef50_A9KX94 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_Q893J9 Transcriptional regulatory protein n=1 Tax=Clost... 84 2e-15 UniRef50_C7QZL8 Putative two component transcriptional regulator... 84 2e-15 UniRef50_Q99U73 Response regulator arlR n=10 Tax=Firmicutes RepI... 84 2e-15 UniRef50_C0D718 Putative uncharacterized protein n=1 Tax=Clostri... 84 2e-15 UniRef50_C8WPQ3 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_C6I3R1 Two-component system response regulator n=20 Tax... 84 2e-15 UniRef50_A6CDX9 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_Q2J4Y7 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_UPI0001973D88 response regulator DrrA n=1 Tax=Clostridi... 84 2e-15 UniRef50_B6GBG2 Putative uncharacterized protein n=2 Tax=Collins... 84 2e-15 UniRef50_C9LLT4 DNA-binding response regulator PhoP n=1 Tax=Dial... 83 2e-15 UniRef50_A9AXT6 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_A6TSQ9 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_A6VT30 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_B7IXR9 DNA-binding response regulator n=167 Tax=Bacilli... 83 2e-15 UniRef50_B1WTP9 Two-component response regulator n=12 Tax=Cyanob... 83 2e-15 UniRef50_B9JNY4 Phosphate regulon transcriptional regulatory pro... 83 2e-15 UniRef50_A9KSV1 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_C3CKG2 Two-component response regulator n=11 Tax=Bacill... 83 2e-15 UniRef50_C7Q501 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_C4ZEN6 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_C0MDU1 Response regulator protein n=6 Tax=Streptococcus... 83 2e-15 UniRef50_Q44006 Transcriptional activator protein czcR n=330 Tax... 83 2e-15 UniRef50_D2B5L0 Response regulator receiver protein n=15 Tax=Act... 83 3e-15 UniRef50_C7N0P4 Response regulator with CheY-like receiver domai... 83 3e-15 UniRef50_B8FS42 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_A4CE30 Probable two-component response regulator transc... 83 3e-15 UniRef50_UPI0000164CF1 response regulator n=1 Tax=Deinococcus ra... 83 3e-15 UniRef50_B0S387 Two-component response regulator n=6 Tax=Clostri... 83 3e-15 UniRef50_A9FLR1 DNA-binding response regulator n=1 Tax=Sorangium... 83 3e-15 UniRef50_Q2JGV9 Response regulator receiver protein n=1 Tax=Fran... 83 3e-15 UniRef50_A8F5U3 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_A9BIE2 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_Q7CXM1 Two component response regulator n=11 Tax=Alphap... 83 3e-15 UniRef50_UPI0001787E68 two component transcriptional regulator, ... 83 3e-15 UniRef50_UPI0001AEBEBF two component transcriptional regulator, ... 83 3e-15 UniRef50_B7QTW7 Two-component response regulator n=1 Tax=Ruegeri... 83 3e-15 UniRef50_B9T9H2 Putative uncharacterized protein n=1 Tax=Ricinus... 83 3e-15 UniRef50_A6LA64 Two-component system response regulator n=12 Tax... 83 3e-15 UniRef50_B1ZVS5 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_C0CLW6 Putative uncharacterized protein n=1 Tax=Blautia... 83 3e-15 UniRef50_D2QX61 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_B1VIL1 Two-component system response regulator n=3 Tax=... 83 3e-15 UniRef50_A5UWJ8 Two component transcriptional regulator, winged ... 82 3e-15 UniRef50_A1WWM5 Response regulator receiver protein n=1 Tax=Halo... 82 3e-15 UniRef50_P69229 Transcriptional regulatory protein baeR n=214 Ta... 82 4e-15 UniRef50_Q3ATG7 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_Q01RB2 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_B5HID4 Two-component system response regulator n=3 Tax=... 82 4e-15 UniRef50_B9DT80 Response regulator protein n=2 Tax=Streptococcus... 82 4e-15 UniRef50_D1AJ61 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_C7ND40 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_C8NR68 DNA-binding response regulator n=12 Tax=Bacteria... 82 4e-15 UniRef50_Q9F5J0 Sim1 n=2 Tax=Streptomyces antibioticus RepID=Q9F... 82 4e-15 UniRef50_A7VHB9 Putative uncharacterized protein n=5 Tax=Firmicu... 82 4e-15 UniRef50_C0Z5X8 Two-component response regulator n=143 Tax=Firmi... 82 4e-15 UniRef50_A1VI78 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_C4Z360 Two-component system, OmpR family, response regu... 82 4e-15 UniRef50_Q49XM7 Response regulator arlR n=145 Tax=Bacteria RepID... 82 4e-15 UniRef50_B7K7W8 Multi-component transcriptional regulator, winge... 82 5e-15 UniRef50_UPI00016B25CE two component transcriptional regulator, ... 82 5e-15 UniRef50_C5AL42 Response regulator consisting of a CheY-like rec... 82 5e-15 UniRef50_A4FNN5 Response regulator, two-component system n=12 Ta... 82 5e-15 UniRef50_O31050 ScnR n=3 Tax=Streptococcus RepID=O31050_STRPY 82 5e-15 UniRef50_Q1ASD3 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_Q2IGB7 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_A0Z5Z4 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_C8WHB5 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_C4DJM5 Response regulator with CheY-like receiver domai... 82 5e-15 UniRef50_Q3AVF0 Response regulator receiver domain protein (CheY... 82 5e-15 UniRef50_D1CC84 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_B0G6B9 Putative uncharacterized protein n=4 Tax=Clostri... 82 5e-15 UniRef50_C4FAP3 Putative uncharacterized protein n=3 Tax=Bacteri... 82 5e-15 UniRef50_C9ZAU5 Putative two-component system response regulator... 82 5e-15 UniRef50_D2LS32 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_A5UQY1 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_Q12RS3 Transcriptional regulatory protein-like protein ... 82 6e-15 UniRef50_C4Z9T4 Putative uncharacterized protein n=1 Tax=Eubacte... 82 6e-15 UniRef50_C8W041 Two component transcriptional regulator, winged ... 82 6e-15 UniRef50_D0SP77 Phosphate regulon transcriptional regulatory pro... 82 6e-15 UniRef50_A9KJT6 Two component transcriptional regulator, winged ... 82 6e-15 UniRef50_A3ER20 Putative two component transcriptional regulator... 82 6e-15 UniRef50_A8SYK9 Putative uncharacterized protein n=3 Tax=Clostri... 82 6e-15 UniRef50_B8I8Q2 Two component transcriptional regulator, winged ... 82 6e-15 UniRef50_UPI0001C424C1 hypothetical protein BpOF4_12950 n=1 Tax=... 82 6e-15 UniRef50_D1B9J7 Two component transcriptional regulator, winged ... 82 6e-15 UniRef50_D1B4X3 Response regulator receiver n=2 Tax=Campylobacte... 82 6e-15 UniRef50_B9XE94 Two component transcriptional regulator, winged ... 82 7e-15 UniRef50_A5MZN8 Predicted transcriptional regulator n=2 Tax=Clos... 82 7e-15 UniRef50_Q1CZP3 DNA-binding reponse regulator n=2 Tax=Myxococcal... 82 7e-15 UniRef50_Q2JIE3 DNA-binding response regulator n=12 Tax=Cyanobac... 82 7e-15 UniRef50_A0YP32 Two-component response regulator n=1 Tax=Lyngbya... 81 8e-15 UniRef50_B2JBG7 Two component transcriptional regulator, winged ... 81 8e-15 UniRef50_A3WKN2 Response regulator (CheY,wHTH domains) n=1 Tax=I... 81 8e-15 UniRef50_B2V1F5 Two component response regulator n=6 Tax=Bacteri... 81 9e-15 UniRef50_A5EYW4 Transcriptional regulator n=31 Tax=Bacteria RepI... 81 9e-15 UniRef50_Q1IVX4 Two component transcriptional regulator, winged ... 81 9e-15 UniRef50_B5CLM3 Putative uncharacterized protein n=1 Tax=Ruminoc... 81 9e-15 UniRef50_Q1NLC6 Response regulator receiver n=3 Tax=Deltaproteob... 81 9e-15 UniRef50_C4XS15 OmpR family two-component response regulator n=2... 81 9e-15 UniRef50_B1XLL2 Two-component response regulator n=3 Tax=Synecho... 81 9e-15 UniRef50_C4WAZ7 Two component transcriptional regulator, winged ... 81 9e-15 UniRef50_D2MMU4 Response regulator receiver domain protein n=1 T... 81 1e-14 UniRef50_C9ZA01 Putative two-component system response regulator... 81 1e-14 UniRef50_UPI0001B518F4 two-component system response regulator n... 81 1e-14 UniRef50_A8LWI8 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A5VAJ0 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A8RM86 Putative uncharacterized protein n=1 Tax=Clostri... 81 1e-14 UniRef50_C5CE19 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_C7RUD8 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_B5ELJ1 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q6MHZ0 Two component response regulator n=1 Tax=Bdellov... 81 1e-14 UniRef50_B8FQS3 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q01ZD3 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q2BRQ1 Transcriptional regulatory protein CpxR (Fragmen... 81 1e-14 UniRef50_C8R030 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A7ZEI3 Transcriptional activator protein CopR n=9 Tax=B... 81 1e-14 UniRef50_Q39SW2 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_B6BUZ2 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_C4Z758 Two-component system, OmpR family, response regu... 81 1e-14 UniRef50_A7BDK1 Putative uncharacterized protein n=1 Tax=Actinom... 81 1e-14 UniRef50_C0QFG8 Two-component DNA-binding response regulator n=1... 81 1e-14 UniRef50_B0TXI9 Response regulator receiver protein n=14 Tax=Fra... 81 1e-14 UniRef50_A9AWE4 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A8W7F8 Putative regulator n=1 Tax=Streptomyces refuineu... 81 1e-14 UniRef50_B1ZTF3 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_D1CB22 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_D0MIF5 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_B8IIA6 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_C7Q2J4 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A4XD98 Response regulator receiver n=3 Tax=Actinomyceta... 81 1e-14 UniRef50_B7GFY6 DNA-binding response regulator, OmpR family (REC... 81 2e-14 UniRef50_Q0I8A9 DNA-binding response regulator n=13 Tax=Cyanobac... 81 2e-14 UniRef50_Q1J2L1 Two component transcriptional regulator, winged ... 81 2e-14 UniRef50_B0AAH6 Putative uncharacterized protein n=1 Tax=Clostri... 80 2e-14 UniRef50_Q98AP0 Phosphate regulatory protein n=2 Tax=Mesorhizobi... 80 2e-14 UniRef50_D0KHV6 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_Q47PT2 Similar to Response regulators consisting of a C... 80 2e-14 UniRef50_C4DQ28 Response regulator with CheY-like receiver domai... 80 2e-14 UniRef50_C0QZY4 OmpR n=2 Tax=Brachyspira RepID=C0QZY4_BRAHW 80 2e-14 UniRef50_D2BK97 Two-component system, response regulator n=5 Tax... 80 2e-14 UniRef50_C5NUZ8 Response regulator ArlR n=4 Tax=Bacteria RepID=C... 80 2e-14 UniRef50_C6E2L1 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_B2TRC2 Alkaline phosphatase synthesis transcriptional r... 80 2e-14 UniRef50_Q5WC24 Two-component response regulator n=1 Tax=Bacillu... 80 2e-14 UniRef50_A3Q549 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_D0IV51 Response regulator receiver protein n=2 Tax=Coma... 80 2e-14 UniRef50_C6Q063 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_C4ZI38 DNA-binding response regulator, OmpR family (Rec... 80 2e-14 UniRef50_Q0BQV4 Two-component response regulator n=10 Tax=Alphap... 80 2e-14 UniRef50_C8WPK8 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_B4CUK8 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_C6WFU1 Putative two component transcriptional regulator... 80 2e-14 UniRef50_C1FSZ1 Regulatory protein VanR n=16 Tax=Firmicutes RepI... 80 2e-14 UniRef50_B7RXJ1 Response regulator receiver domain protein n=1 T... 80 2e-14 UniRef50_B2TMQ5 Regulatory protein VanR n=5 Tax=Clostridium RepI... 80 2e-14 UniRef50_A3PUD7 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_D2M1X4 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_A6W7C9 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_Q82BP8 Putative two-component system response regulator... 80 3e-14 UniRef50_B1IAB9 VncR, response regulator n=69 Tax=Firmicutes Rep... 80 3e-14 UniRef50_C8NZD2 DNA-binding response regulator n=3 Tax=Erysipelo... 80 3e-14 UniRef50_A5Z890 Putative uncharacterized protein n=1 Tax=Eubacte... 80 3e-14 UniRef50_C6LEF6 Phosphate regulon response regulator PhoB n=3 Ta... 80 3e-14 UniRef50_C6QH06 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_C0YVQ4 Response regulator n=1 Tax=Chryseobacterium gleu... 80 3e-14 UniRef50_A8LCN3 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_C2BEN4 Possible response regulator n=3 Tax=Anaerococcus... 79 3e-14 UniRef50_Q2BDB2 Two-component response regulator n=1 Tax=Bacillu... 79 3e-14 UniRef50_C7LY45 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_B4DAQ3 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_P76340 Probable transcriptional regulatory protein yedW... 79 3e-14 UniRef50_A8LHM5 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_Q1QYP1 Two component transcriptional regulator, winged ... 79 4e-14 UniRef50_O66657 Transcriptional regulator (PhoB-like) n=2 Tax=Aq... 79 4e-14 UniRef50_B2IFK7 Two component transcriptional regulator, winged ... 79 4e-14 UniRef50_C8WG99 Two component transcriptional regulator, winged ... 79 4e-14 UniRef50_B1BBC0 Regulatory protein VanR n=1 Tax=Clostridium botu... 79 4e-14 UniRef50_D1PRQ3 DNA-binding response regulator SrrA n=1 Tax=Subd... 79 4e-14 UniRef50_A9GKN3 Conserved hypothetical protein n=1 Tax=Sorangium... 79 4e-14 UniRef50_Q2W608 Response regulator consisting of a CheY-like rec... 79 4e-14 UniRef50_B7K2S9 Two component transcriptional regulator, winged ... 79 4e-14 UniRef50_B5HT18 Repressor-response regulator n=1 Tax=Streptomyce... 79 4e-14 UniRef50_A6QA63 Two-component response regulator n=1 Tax=Sulfuro... 79 4e-14 UniRef50_Q188S8 Two-component response regulator n=28 Tax=Bacter... 79 5e-14 UniRef50_A9KNR4 Two component transcriptional regulator, winged ... 79 5e-14 UniRef50_P08368 Transcriptional regulatory protein creB n=64 Tax... 79 5e-14 UniRef50_C6WIA6 Two component transcriptional regulator, winged ... 79 5e-14 UniRef50_Q1NHM9 DNA-binding response regulator n=1 Tax=Sphingomo... 79 5e-14 UniRef50_A5FVA6 Two component transcriptional regulator, winged ... 79 5e-14 UniRef50_P50351 Transcriptional regulatory protein chvI n=188 Ta... 79 5e-14 UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=... 79 5e-14 UniRef50_D1VJ14 Two component transcriptional regulator, winged ... 79 5e-14 UniRef50_C3JSB6 Two component transcriptional regulator, winged ... 79 5e-14 UniRef50_C1AAZ5 Phosphate regulon transcriptional regulatory pro... 79 6e-14 UniRef50_B1I7Y4 Response regulator SaeR n=46 Tax=Firmicutes RepI... 79 6e-14 UniRef50_A3QF24 Two component transcriptional regulator, winged ... 79 6e-14 UniRef50_B5IP04 Two-component response regulator n=1 Tax=Cyanobi... 79 6e-14 UniRef50_A8ZMT3 Transcriptional regulatory protein, C terminal d... 79 6e-14 UniRef50_B7K2G1 Two component transcriptional regulator, winged ... 79 6e-14 UniRef50_Q6AQP4 Probable two-component system response regulator... 79 6e-14 UniRef50_C1F979 DNA-binding response regulator n=1 Tax=Acidobact... 78 6e-14 UniRef50_C6HXQ3 Two component transcriptional regulator, winged ... 78 7e-14 UniRef50_UPI000196B4E5 hypothetical protein CATMIT_00997 n=1 Tax... 78 7e-14 UniRef50_Q212W6 Two component transcriptional regulator, winged ... 78 7e-14 UniRef50_C3XEK1 Response regulator ompR n=1 Tax=Helicobacter bil... 78 7e-14 UniRef50_B4SKL2 Two component transcriptional regulator, winged ... 78 7e-14 UniRef50_Q72TM3 Response regulator n=2 Tax=Leptospira interrogan... 78 7e-14 UniRef50_A4ZV27 RsrR n=2 Tax=Acidithiobacillus caldus RepID=A4ZV... 78 7e-14 UniRef50_A8ETZ6 Two-component response regulator n=80 Tax=Bacter... 78 7e-14 UniRef50_B7VQ15 DNA-binding response regulator n=8 Tax=Vibrional... 78 7e-14 UniRef50_A0RG02 Two-component response regulator n=92 Tax=Bacter... 78 7e-14 UniRef50_Q9ETC5 Two component system response regulator n=2 Tax=... 78 7e-14 UniRef50_Q1IUY4 Two component transcriptional regulator, winged ... 78 7e-14 UniRef50_A3PND2 Two component transcriptional regulator, winged ... 78 7e-14 UniRef50_Q7ULL1 Two-component system response regulator n=1 Tax=... 78 8e-14 UniRef50_A5FBX2 Two component transcriptional regulator, winged ... 78 8e-14 UniRef50_B0RLM8 Transcriptional regulator n=6 Tax=Xanthomonas Re... 78 8e-14 UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein ... 78 8e-14 UniRef50_A8L7H2 Putative two component transcriptional regulator... 78 8e-14 UniRef50_C6LFE5 DNA-binding response regulator CsrR n=2 Tax=Firm... 78 8e-14 UniRef50_A0LU58 Two component transcriptional regulator, winged ... 78 8e-14 UniRef50_A4SHT1 Two-component system response regulator n=10 Tax... 78 9e-14 UniRef50_C4RGF6 Two-component system response regulator receiver... 78 9e-14 UniRef50_A4AIS8 Two-component system, regulatory protein n=2 Tax... 78 9e-14 UniRef50_D1BJH9 Response regulator with CheY-like receiver domai... 78 9e-14 UniRef50_Q47QJ3 Response regulator receiver n=1 Tax=Thermobifida... 78 9e-14 UniRef50_B4WP26 Response regulator receiver domain protein n=1 T... 78 9e-14 UniRef50_D1WUT0 Two component transcriptional regulator, winged ... 78 1e-13 UniRef50_Q7NGT9 Two-component response regulator n=1 Tax=Gloeoba... 78 1e-13 UniRef50_Q47IJ9 Two component transcriptional regulator, winged ... 78 1e-13 UniRef50_Q0RFU4 Two-component system response regulator n=18 Tax... 78 1e-13 UniRef50_B8FGR7 Two component transcriptional regulator, winged ... 78 1e-13 UniRef50_Q0AKG2 Two component transcriptional regulator, winged ... 78 1e-13 UniRef50_C6LDD6 DNA-binding response regulator n=3 Tax=Clostridi... 78 1e-13 UniRef50_A1SMF6 Transcriptional regulator domain protein n=1 Tax... 78 1e-13 UniRef50_C6LHZ3 Regulatory protein VanR n=2 Tax=Clostridiales Re... 78 1e-13 UniRef50_A8SMV7 Putative uncharacterized protein n=1 Tax=Parvimo... 78 1e-13 UniRef50_Q1ISH8 Lysine decarboxylase transcriptional regulator, ... 78 1e-13 UniRef50_D2R5T3 Two component transcriptional regulator, winged ... 78 1e-13 UniRef50_C6VUR1 Two component transcriptional regulator, winged ... 77 1e-13 UniRef50_B4WSX3 Response regulator receiver domain protein n=1 T... 77 1e-13 UniRef50_UPI000185BED4 KDP operon transcriptional regulatory pro... 77 1e-13 UniRef50_Q0RUE0 Putative glnR family transcriptional regulatory ... 77 1e-13 UniRef50_C0Z6C7 Two-component response regulator n=3 Tax=Bacilla... 77 1e-13 UniRef50_A3Y9U3 Response regulator protein n=1 Tax=Marinomonas s... 77 1e-13 UniRef50_C9NBD5 Two component transcriptional regulator, winged ... 77 1e-13 UniRef50_C8NDP1 DNA-binding response regulator n=2 Tax=Firmicute... 77 1e-13 UniRef50_UPI0001C35523 two component transcriptional regulator, ... 77 1e-13 UniRef50_B7S398 Response regulator receiver domain protein n=1 T... 77 1e-13 UniRef50_C6VX71 Two component transcriptional regulator, winged ... 77 1e-13 UniRef50_Q0EY91 Two comoponent transcriptional regulator, winged... 77 1e-13 UniRef50_A0PWB4 Response regulator mprA n=284 Tax=Bacteria RepID... 77 1e-13 UniRef50_Q1LCD6 Two component transcriptional regulator, winged ... 77 1e-13 UniRef50_C4RRF2 Two-component system response regulator n=1 Tax=... 77 1e-13 UniRef50_B0S191 DNA-binding response regulator n=2 Tax=Finegoldi... 77 1e-13 UniRef50_B5J7Y1 Response regulator receiver domain protein n=1 T... 77 1e-13 UniRef50_B8HC02 Two component transcriptional regulator, winged ... 77 1e-13 UniRef50_B5VWD3 Multi-component transcriptional regulator, winge... 77 1e-13 UniRef50_A7AYZ8 Putative uncharacterized protein n=1 Tax=Ruminoc... 77 1e-13 UniRef50_Q7M8N6 RESPONSE REGULATOR OMPR-CheY-like and winged-hel... 77 1e-13 UniRef50_Q187R9 Two-component system response regulator n=20 Tax... 77 1e-13 UniRef50_D1AQD9 Two component transcriptional regulator, winged ... 77 1e-13 UniRef50_A8VZA3 Response regulator receiver protein n=2 Tax=Baci... 77 1e-13 UniRef50_A2CD17 Two-component response regulator n=58 Tax=Cyanob... 77 1e-13 UniRef50_C9Z8Q7 Putative two-component response regulator n=1 Ta... 77 1e-13 UniRef50_B5IMP1 Two-component response regulator n=1 Tax=Cyanobi... 77 1e-13 UniRef50_C3X641 Two component transcriptional regulator n=1 Tax=... 77 1e-13 UniRef50_B0SY74 Two component transcriptional regulator, winged ... 77 2e-13 UniRef50_A3JW86 DNA-binding response regulator n=1 Tax=Rhodobact... 77 2e-13 UniRef50_B5ZPT0 Two component transcriptional regulator, winged ... 77 2e-13 UniRef50_UPI000050FFEF putative two component transcriptional re... 77 2e-13 UniRef50_C4G725 Putative uncharacterized protein n=1 Tax=Abiotro... 77 2e-13 UniRef50_A8L660 Putative two component transcriptional regulator... 77 2e-13 >UniRef50_P94504 Transcriptional regulatory protein yvrH n=5 Tax=Bacillus RepID=YVRH_BACSU Length = 237 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +FCE+P + S+ ++ +K+ G + TV V IR++R+ E P PE I T+ G Sbjct: 165 LQYFCEHPNVVLSKDQIYEKVWGYPSYGDNNTVMVHIRKLREKIERDPSNPEYIVTVRGL 224 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 225 GYRFIPNPE 233 >UniRef50_A8F5W8 Two component transcriptional regulator, winged helix family n=24 Tax=Bacteria RepID=A8F5W8_THELT Length = 263 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 39/70 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN GK+ SR LL K+ G + RTVDV IRR+R E P P+ I T+ G+ Sbjct: 193 LRFLAENEGKVFSRDVLLDKLWGYDYYGDTRTVDVHIRRLRTKIEEDPSNPKYIITVRGK 252 Query: 62 GYRFCGDLED 71 GY+F ++ Sbjct: 253 GYKFRDPGKE 262 >UniRef50_Q65F19 Two-component response regulator YvrH n=85 Tax=Firmicutes RepID=Q65F19_BACLD Length = 242 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 40/67 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +FC++P ++ S+ ++ +K+ G TV V IR++R+ E P +PE I TI G Sbjct: 168 LQYFCDHPNRVLSKDQIYEKVWGVPSYGDSNTVMVHIRKLREKIEKDPSSPEYIVTIRGL 227 Query: 62 GYRFCGD 68 GY+F + Sbjct: 228 GYKFVPN 234 >UniRef50_Q2RZP5 Response regulator DrrA n=11 Tax=Bacteria RepID=Q2RZP5_SALRD Length = 245 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +PG+ SR ELL ++ G + + TV+ I R+R E P P + T+ G Sbjct: 171 LLLFARHPGRAFSRDELLDEVWGYQYSGYSHTVNTHINRLRNKIEPDPSEPRYVKTVWGV 230 Query: 62 GYRFCGDLE 70 GYRF E Sbjct: 231 GYRFAEREE 239 >UniRef50_Q8DLA7 Two-component response regulator n=20 Tax=Bacteria RepID=Q8DLA7_THEEB Length = 256 Score = 122 bits (307), Expect = 5e-27, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ R +LL ++ G + +TVDV IR +R+ E+ P P+ I T+ G Sbjct: 192 LELFMRHPRRVWPREQLLDQVWGPDFVGDSKTVDVHIRWLREKIETDPSHPQYILTVRGF 251 Query: 62 GYRF 65 GYRF Sbjct: 252 GYRF 255 >UniRef50_Q7NMA6 Two-component response regulator n=2 Tax=Bacteria RepID=Q7NMA6_GLOVI Length = 238 Score = 121 bits (306), Expect = 6e-27, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 41/69 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG++ SR ELL+++ G + + RT+DV +R++R+ E P P + T+ G Sbjct: 170 LAQLADHPGRVYSRDELLERVWGYDFEGGHRTIDVHVRKLREKLEPDPTRPVYVLTVWGV 229 Query: 62 GYRFCGDLE 70 GY+F G Sbjct: 230 GYKFAGPPR 238 >UniRef50_Q1AZ24 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZ24_RUBXD Length = 234 Score = 120 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG++ SR +++ + G E R+ DV I+ +R+ E P P I T+ G Sbjct: 167 VLALLASNPGRVYSREQIMDHLWGGEFFGEPRSADVHIQHLRQKIEPDPKNPRYIQTVRG 226 Query: 61 EGYRFC 66 GYRF Sbjct: 227 MGYRFA 232 >UniRef50_C8VW64 Two component transcriptional regulator, winged helix family n=4 Tax=Clostridia RepID=C8VW64_DESAS Length = 229 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ ++A LL K+ D TV V IRR+R+ E+ P PE I T+ G Sbjct: 162 LWLMASNPNRVFTKAHLLDKIWDSSFYGDDNTVTVHIRRLREKVETDPSNPEYIKTVWGM 221 Query: 62 GYRFC 66 GY+F Sbjct: 222 GYKFE 226 >UniRef50_B8I014 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridium RepID=B8I014_CLOCE Length = 233 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +NP K+ ++ +L K + G + TV V IRR+R+ E P P I TI G Sbjct: 166 ILKLFLQNPRKVFTKNQLFKSIWGENYINDENTVMVHIRRLREKIEKDPSNPSYIQTIWG 225 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 226 IGYKLVEE 233 >UniRef50_P39663 Alkaline phosphatase synthesis transcriptional regulatory protein sphR n=34 Tax=Cyanobacteria RepID=SPHR_SYNE7 Length = 257 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 37/64 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR +LL+K+ G + +T+DV IR +R+ E+ P P + T+ G Sbjct: 193 LELFMRHPRRVWSRDQLLEKIWGIDFMGDSKTIDVHIRWLREKIEANPSNPSYLLTVRGF 252 Query: 62 GYRF 65 GYR Sbjct: 253 GYRL 256 >UniRef50_Q05943 Transcriptional regulatory protein glnR n=102 Tax=Bacteria RepID=GLNR_STRCO Length = 267 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ +RA+LL+++ G + RTVDV +RR+R P+ +I T+ Sbjct: 158 LKYLAQHPGRVFTRAQLLQEVWGYDYFGGTRTVDVHVRRLRAKLG--PEHESLIGTVRNV 215 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 216 GYRFVTPEK 224 >UniRef50_D2BG66 DNA-binding response regulator, two-component system, OmpR family n=8 Tax=Bacteria RepID=D2BG66_DEHSV Length = 256 Score = 118 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 36/63 (57%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 +N ++ SR +LL+K+ G + RTVDV I +R+ E+ P +P + T+ G GY Sbjct: 193 FMVQNRCRVFSREQLLEKVWGYDYPGWTRTVDVHISWLRQKIEADPSSPRHLITVRGTGY 252 Query: 64 RFC 66 +F Sbjct: 253 KFE 255 >UniRef50_B8FSL6 Two component transcriptional regulator, winged helix family n=14 Tax=Bacteria RepID=B8FSL6_DESHD Length = 237 Score = 118 bits (297), Expect = 6e-26, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ENPGK R E+L + G + +T+DV IRR+R+ E P P I TI G Sbjct: 165 LKMFMENPGKALRREEMLNGIWGEDYFGDTKTLDVHIRRLREKIEDNPSDPRYIKTIWGS 224 Query: 62 GYRFCGD 68 GYR+ + Sbjct: 225 GYRWQPE 231 >UniRef50_C6JFQ6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFQ6_9FIRM Length = 139 Score = 117 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 28/66 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG++ S+ ++ + V I IR+ E P P I T+ G Sbjct: 68 ILQLLAQNPGRVFSKEQIYDIVWKESYFGDYNIVMSHISHIREKIEDDPGNPVYIQTVWG 127 Query: 61 EGYRFC 66 GY+F Sbjct: 128 VGYKFN 133 >UniRef50_A7GKH0 Two component transcriptional regulator, winged helix family n=68 Tax=Firmicutes RepID=A7GKH0_BACCN Length = 238 Score = 117 bits (296), Expect = 9e-26, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ ++ +L + + D TV V IR++RK E+ P P+ I T+ G Sbjct: 167 LKFFASNPEQVFTKTQLFRNVWDSNYIEDDNTVMVHIRKLRKKIEADPSNPKFIQTVWGI 226 Query: 62 GYRFCGD 68 GY+F G+ Sbjct: 227 GYKFVGE 233 >UniRef50_A8FHC6 Response regulator n=3 Tax=Bacillus RepID=A8FHC6_BACP2 Length = 240 Score = 117 bits (296), Expect = 9e-26, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 38/66 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +FC++P + S+ ++ +K+ G + TV V IR++R+ E P PE I TI G Sbjct: 168 LKYFCDHPNVVLSKDQIYEKVWGVPSYGDNNTVMVHIRKLREKIELDPSQPEYIVTIRGM 227 Query: 62 GYRFCG 67 GY+F Sbjct: 228 GYKFIP 233 >UniRef50_C6LDL3 DNA-binding response regulator YycF n=2 Tax=Firmicutes RepID=C6LDL3_9FIRM Length = 237 Score = 117 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP + SR +L +K+ G + TV V I RIR+ E P+I+ T+ G Sbjct: 171 LKFLAMNPNIVFSREQLFEKIWGYDYVGDSVTVMVHINRIREKIEDDSKNPKILETVWGA 230 Query: 62 GYRFCGD 68 GYRF D Sbjct: 231 GYRFNKD 237 >UniRef50_C3KZU0 DNA-binding response regulator n=14 Tax=Firmicutes RepID=C3KZU0_CLOB6 Length = 235 Score = 117 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 37/68 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F ENP ++ ++ ++ + G E TV V +RR+R E P+ P++I T+ G Sbjct: 166 ILKLFFENPNRVFTKVQIYDSVWGEEFLSDYNTVTVHMRRLRSKIEDDPNNPKLIETVWG 225 Query: 61 EGYRFCGD 68 GY+ GD Sbjct: 226 IGYKLTGD 233 >UniRef50_C9KKD5 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKD5_9FIRM Length = 235 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG+ SR ELL+++ G E RTVDV IR +R + P + I T+ G Sbjct: 167 LKLLVTNPGRAFSRDELLERIWGYEYYGDTRTVDVHIRHLRAKLKDDPTVSDAIETVRGV 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFA 231 >UniRef50_Q2BDN1 Two component transcriptional regulator, winged helix family protein n=2 Tax=Firmicutes RepID=Q2BDN1_9BACI Length = 234 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G++ S L + G++ RTV V I +RK E P PE I T+ G Sbjct: 168 LCCLAENAGRVFSAEHLFDSIWGKDSFGDIRTVMVHISNLRKKIEQDPARPEYIITVRGM 227 Query: 62 GYRFCG 67 GY+F G Sbjct: 228 GYKFNG 233 >UniRef50_B2J8Q5 Two component transcriptional regulator, winged helix family n=8 Tax=Cyanobacteria RepID=B2J8Q5_NOSP7 Length = 239 Score = 116 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P + SR +L++K+ G + R VDV I ++RK E P PE I T+ G Sbjct: 166 ILHFLASHPNQAWSRPQLIQKIWGCDYVGDGRVVDVHIGQLRKKMEVDPSVPEFIKTVRG 225 Query: 61 EGYRFCGDLED 71 GY+F E+ Sbjct: 226 YGYKFEAPDEN 236 >UniRef50_Q21EC1 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=Q21EC1_SACD2 Length = 232 Score = 116 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 37/64 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +PG++ SR +LL + G + ++ TV+ I R+R E+ P+ + T+ G Sbjct: 167 LLYMASHPGQVFSREKLLDAVWGYQHSGYEHTVNSHINRLRTKLETDTSNPKYVLTVWGV 226 Query: 62 GYRF 65 GY+F Sbjct: 227 GYKF 230 >UniRef50_B3QW38 Two component transcriptional regulator, winged helix family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW38_CHLT3 Length = 239 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NPG+ SR ELL + G ++ TV+ I R+R E P P+ I T+ G Sbjct: 168 LSLFMKNPGRTYSRTELLDLVWGASYSGYEHTVNSHINRLRMKIEENPAKPKYILTVWGV 227 Query: 62 GYRFCGDLE 70 GY+F L+ Sbjct: 228 GYKFNNQLK 236 >UniRef50_B7GTW3 Response regulator receiver protein n=6 Tax=Bifidobacteriaceae RepID=B7GTW3_BIFLI Length = 266 Score = 115 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ +RA+LL+++ G + RTVDV IRR+R + +I T+ Sbjct: 169 LKYLVQHPGRVFTRAQLLQEVWGYDYYGGTRTVDVHIRRLRAKLG--GEYEHLIGTVRNV 226 Query: 62 GYRFCGDLED 71 GYRF D Sbjct: 227 GYRFDPPETD 236 >UniRef50_A4J267 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J267_DESRM Length = 232 Score = 115 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P +I SR +LL+++ + + TV V IRR+R+ E PE+I T+ G Sbjct: 164 LWLMASHPNQIFSRLQLLEQIWESHFEGDEDTVTVHIRRLRRKIERDAAKPELIKTVWGV 223 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 224 GYKFEAPKE 232 >UniRef50_D2Q6K7 Response regulator-like transcriptional regulatory protein n=7 Tax=Bifidobacterium RepID=D2Q6K7_9BIFI Length = 253 Score = 115 bits (291), Expect = 4e-25, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ +RA+LL+++ G + RTVDV IRR+R + +I T+ Sbjct: 168 LKYLVQHPGRVFTRAQLLQEVWGYDYYGGTRTVDVHIRRLRAKLG--GEYEHVIGTVRNV 225 Query: 62 GYRFCGDLED 71 GYRF E+ Sbjct: 226 GYRFDPPEEE 235 >UniRef50_C8W6G9 Putative two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W6G9_DESAS Length = 277 Score = 115 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P +I +R LL + + D TV V IRR+RK E P+ P I T+ G Sbjct: 210 LWLMASHPNQIFTRNNLLTTIWEADSAGDDNTVTVHIRRLRKKIEVNPNKPRYIKTVWGV 269 Query: 62 GYRFC 66 GYRF Sbjct: 270 GYRFE 274 >UniRef50_A3I5H1 DNA-binding response regulator n=2 Tax=Bacillaceae RepID=A3I5H1_9BACI Length = 235 Score = 115 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N ++ S+++LL + G + + T+ V IRRIR+ E P P + T+ G Sbjct: 166 LFFLAKNRNQVFSKSQLLDAVWGYDTYGDENTITVYIRRIREKIEINPSHPVYLQTVWGV 225 Query: 62 GYRFCG 67 GY+F Sbjct: 226 GYKFST 231 >UniRef50_C6VLR9 Response regulator n=52 Tax=Firmicutes RepID=C6VLR9_LACPJ Length = 242 Score = 115 bits (289), Expect = 5e-25, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F E G++ SR +L + G + R VD+ I +R+ E+ P P +I T+ G Sbjct: 173 LVYFVEREGRVLSRDAILNHVWGYDYASETRIVDIHISHLREKIEADPKQPRLIRTVRGF 232 Query: 62 GYRFCGD 68 GY F GD Sbjct: 233 GYEFVGD 239 >UniRef50_Q1IMA9 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q1IMA9_ACIBL Length = 230 Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 36/65 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R +LL + R+VDV +RRIR+ E P+ P + T+ G Sbjct: 163 LEYLARHPGRVFTRDQLLDAVWRETHYVTPRSVDVYVRRIREKIEENPEDPRYLKTVRGA 222 Query: 62 GYRFC 66 GYRF Sbjct: 223 GYRFE 227 >UniRef50_C1F3E6 Response regulator DrrA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3E6_ACIC5 Length = 232 Score = 114 bits (288), Expect = 7e-25, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 37/65 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ SR LL + G R+VDV +RRIR+ ES P+ P + T+ G Sbjct: 163 LDYLARHPGRVFSRDHLLDAVWGDARFVTPRSVDVYVRRIREKIESDPENPRFLKTVRGA 222 Query: 62 GYRFC 66 GYRF Sbjct: 223 GYRFE 227 >UniRef50_A6EAJ4 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAJ4_9SPHI Length = 206 Score = 114 bits (288), Expect = 7e-25, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 41/67 (61%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+F NP K+ +R L+ ++ G + RT+D+ I R+RK E+ PD P+++ T+ G Sbjct: 139 ILLYFLRNPNKVINRDALMLEVWGYNSDVNTRTLDMHIVRLRKKIEANPDNPQLLQTVRG 198 Query: 61 EGYRFCG 67 GYRF Sbjct: 199 IGYRFNP 205 >UniRef50_Q67MV1 Two-component response regulator n=7 Tax=Clostridiales RepID=Q67MV1_SYMTH Length = 229 Score = 114 bits (288), Expect = 7e-25, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 34/67 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG + +R ELL + G + +RTVDV +RRIR+ E P P + T G Sbjct: 162 LELLARHPGVVYTRQELLDLVWGYDFAGDERTVDVHVRRIREKLEEDPSRPRYLRTKWGV 221 Query: 62 GYRFCGD 68 GY + Sbjct: 222 GYYLEAE 228 >UniRef50_Q03GZ5 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GZ5_PEDPA Length = 234 Score = 114 bits (287), Expect = 9e-25, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 37/70 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N ++ SR ++L+K+ G E R VD+ I +R E+ P P++I TI G Sbjct: 165 LRYLYKNANQVLSRDQILEKVWGYEYGGQTRIVDIHISHLRDKLENDPKHPQLIKTIRGF 224 Query: 62 GYRFCGDLED 71 GY F D Sbjct: 225 GYEFVSKKGD 234 >UniRef50_B8FYB6 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfitobacterium hafniense RepID=B8FYB6_DESHD Length = 237 Score = 114 bits (287), Expect = 9e-25, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +NP ++ +R ELL + G + RTVDV IRR+R S P + T+ G Sbjct: 164 LYHLAQNPQRVFTREELLGAVWGYDYFGDQRTVDVHIRRLRTKLASLPHE--YLQTVWGV 221 Query: 62 GYRFCGDLE 70 GY+F ++ Sbjct: 222 GYKFTPPVK 230 >UniRef50_Q38WB3 Two component system, response regulator n=58 Tax=Firmicutes RepID=Q38WB3_LACSS Length = 246 Score = 114 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP ++ SR +LL+ + + +RTVD I+++R+ E P++I T+ G Sbjct: 177 LKTLAKNPRQVFSREQLLELVWDYQYFGDERTVDAHIKKLRQKIEEVG--PQVIQTVWGV 234 Query: 62 GYRFC 66 GY+F Sbjct: 235 GYKFD 239 >UniRef50_B5Y819 DNA-binding response regulator YycF n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y819_COPPD Length = 236 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ +R LL ++ G + RT+DV I+ +R E P+ P+ I T+ G Sbjct: 166 LRILMSRAGEVLTREYLLNEIWGADYYGDKRTLDVHIKWLRDKIEPNPNEPKYILTVRGV 225 Query: 62 GYRFCGDLE 70 GY+F GD+ Sbjct: 226 GYKFNGDVR 234 >UniRef50_B1HYB3 DNA-binding response regulator n=2 Tax=Bacillaceae RepID=B1HYB3_LYSSC Length = 233 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + C+N G++ S+ ++ +++ G + D TV V IR++R+ E P P I T+ G Sbjct: 165 LKYLCDNAGQVLSKEQIYERVWG-DCLFDDNTVMVHIRKLREKIEKNPGKPTCIITVRGI 223 Query: 62 GYRFCGDL 69 GY+ GD+ Sbjct: 224 GYKLVGDV 231 >UniRef50_P94413 Uncharacterized transcriptional regulatory protein yclJ n=77 Tax=Bacilli RepID=YCLJ_BACSU Length = 227 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 6/69 (8%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF--ESTPDTPEIIATIH 59 + + +NP ++ SR +LL+++ G + +RTVDV I+R+RK E P + T+ Sbjct: 163 LYYLVQNPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRKKLASEDKP----FLYTVW 218 Query: 60 GEGYRFCGD 68 G GY+F D Sbjct: 219 GVGYKFDED 227 >UniRef50_D2LZ20 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZ20_BACS4 Length = 236 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ EN + S ++ ++ G + +TV V I +R+ E P P++I T+ G Sbjct: 164 LMLLVENKNHVFSAEKIYDQIWGIDHCGDLKTVMVHISNLRRKIEENPSKPKLIKTVRGF 223 Query: 62 GYRFCGDLED 71 GY+F ED Sbjct: 224 GYKFSTADED 233 >UniRef50_C4L703 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillales RepID=C4L703_EXISA Length = 229 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP +I S+ L ++ G D TV V IRR+R+ E P P I T+ G Sbjct: 164 LACFLRNPNRILSKETLFTQVWGESFFGSDNTVMVHIRRLREKVEPNPSEPTYIKTVKGL 223 Query: 62 GYRFC 66 GYR Sbjct: 224 GYRLT 228 >UniRef50_A9AYM0 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AYM0_HERA2 Length = 231 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG + SR +LL + +G+ + ++RT+DV IR +R E P P I T++G Sbjct: 160 ILATLMASPGHVFSRLDLLDRTSGQAYEGYERTIDVHIRNLRSKIEPDPKNPRYIETVYG 219 Query: 61 EGYRFC 66 GYRF Sbjct: 220 VGYRFA 225 >UniRef50_C6XZP6 Response regulator receiver n=3 Tax=Sphingobacteriaceae RepID=C6XZP6_PEDHD Length = 233 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 40/67 (59%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+F NP K+ +R EL+ + G + RT+D+ I R+RK E PD P+++ T+ G Sbjct: 166 ILLYFLRNPNKVINRDELMLVVWGYNSDVNTRTLDMHIVRLRKKIELNPDNPQLLQTVRG 225 Query: 61 EGYRFCG 67 GYRF Sbjct: 226 VGYRFNP 232 >UniRef50_Q892Y1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP n=1 Tax=Clostridium tetani RepID=Q892Y1_CLOTE Length = 175 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 35/65 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F EN K SR ELL + G + + VDV IRR+R E P P+ I T+ G Sbjct: 108 ILKIFLENEEKAFSRDELLDLVWGYDFVGDPKIVDVNIRRLRAKIEDEPSNPKYIETVWG 167 Query: 61 EGYRF 65 +GYR+ Sbjct: 168 KGYRW 172 >UniRef50_C3IWQ5 Two-component response regulator n=2 Tax=Bacillus thuringiensis RepID=C3IWQ5_BACTU Length = 214 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +PG+I ++ ++ + + D T+ V I R+R+ E +P P I TI G Sbjct: 141 ILTLFMGDPGRIFTKKQIFESVWSDYYCADDNTIMVHISRLREKLEDSPKNPVYIKTIRG 200 Query: 61 EGYRFCGDLE 70 GYRF E Sbjct: 201 LGYRFARKEE 210 >UniRef50_P72948 OmpR subfamily n=21 Tax=Bacteria RepID=P72948_SYNY3 Length = 245 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 37/65 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ +R +L++K+ G + +R VD IRR+RK E P P I T+ G Sbjct: 178 LATFMSYPGRVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGL 237 Query: 62 GYRFC 66 GY+F Sbjct: 238 GYKFE 242 >UniRef50_C7G9Y4 DNA-binding response regulator n=6 Tax=Bacteria RepID=C7G9Y4_9FIRM Length = 167 Score = 112 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G + S+ ++ + V IR IR+ E P P I T+ G Sbjct: 97 ILKLLAKHSGIVFSKEQIYDIVWKESYSGDYNIVMSHIRNIREKIEDNPSKPIYIQTVWG 156 Query: 61 EGYRFCGDL 69 GYRF +L Sbjct: 157 VGYRFNKNL 165 >UniRef50_A0LVZ4 Two component transcriptional regulator, winged helix family n=13 Tax=Actinomycetales RepID=A0LVZ4_ACIC1 Length = 245 Score = 112 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ SR +LL+++ G + R VDV +RR+R E P P I+ T+ G Sbjct: 178 LCELASAPDRVYSREQLLERVWGYDYFGDGRIVDVHVRRLRTKIEEDPAHPRILVTVRGL 237 Query: 62 GYR 64 GY+ Sbjct: 238 GYK 240 >UniRef50_Q9F868 Sensory transduction protein regX3 n=47 Tax=Bacteria RepID=REGX3_MYCS2 Length = 228 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R +L+ ++ G + +T+DV ++R+R E P P + T+ G Sbjct: 163 LEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGL 222 Query: 62 GYRFCG 67 GY+ G Sbjct: 223 GYKLEG 228 >UniRef50_B8I272 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiaceae RepID=B8I272_CLOCE Length = 237 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++P + S +L + G + RTV V I +RK E P P++I TI G Sbjct: 166 ILSLLSQHPNMVFSLTQLYDHIWGVDNIGDTRTVMVHISNLRKKIEKDPANPKLIVTIKG 225 Query: 61 EGYRFCG 67 GY+ Sbjct: 226 IGYKLDT 232 >UniRef50_O07130 Sensory transduction protein regX3 n=97 Tax=Actinobacteria (class) RepID=REGX3_MYCBO Length = 227 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R +L+ ++ G + +T+DV ++R+R E+ P P + T+ G Sbjct: 162 LEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGL 221 Query: 62 GYRFCG 67 GY+ G Sbjct: 222 GYKLEG 227 >UniRef50_A7Z5A0 YvrH n=28 Tax=Firmicutes RepID=A7Z5A0_BACA2 Length = 267 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 38/63 (60%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 +F ++P ++ S+ L + + G + D TV V IRR+R+ E+TP P+ + T+ G GY Sbjct: 201 YFLQHPNRVISKETLYQAVWGEDFFGSDNTVMVHIRRLREKIENTPSKPDFLVTVKGLGY 260 Query: 64 RFC 66 +F Sbjct: 261 KFV 263 >UniRef50_Q488W3 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q488W3_COLP3 Length = 260 Score = 112 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 35/64 (54%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 FC++P ++ SRA+LL + G ++ TV+ I R+R E P+II T+ G GY Sbjct: 186 FFCQHPDQVFSRAQLLDGVWGYHHNGYEHTVNSHINRLRSKLEEDCTEPKIIQTVWGVGY 245 Query: 64 RFCG 67 + Sbjct: 246 KLNS 249 >UniRef50_D1C683 Two component transcriptional regulator, winged helix family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C683_SPHTD Length = 231 Score = 112 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P ++ +R +L +++ G TV V I R+R+ E P P I T+ G Sbjct: 164 LQLFAEHPRQVFTREQLFQRLWGE--FGDRHTVTVHIGRLREKIEEDPANPRYIVTVWGV 221 Query: 62 GYRFCGDLE 70 GYRF G+ Sbjct: 222 GYRFDGEAR 230 >UniRef50_B4U3Y8 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=36 Tax=Bacilli RepID=B4U3Y8_STREM Length = 247 Score = 112 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 36/64 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ ++P +R LL+++ G + R VDV I ++R+ E P P+ I TI G Sbjct: 175 LLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGY 234 Query: 62 GYRF 65 GY+F Sbjct: 235 GYKF 238 >UniRef50_C6CSH8 Two component transcriptional regulator, winged helix family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSH8_PAESJ Length = 240 Score = 112 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F +PGK+ SR EL+ + G + DR +DV I +RK E P P +I T+ G G Sbjct: 169 KLFLSHPGKVFSREELINTIRGFDSFVTDRAIDVHIVNLRKKIEQNPKEPRLIRTVWGFG 228 Query: 63 YRFCGD 68 Y++ D Sbjct: 229 YKYTTD 234 >UniRef50_B4WRK5 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRK5_9SYNE Length = 262 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ +R++L+ K+ G + +R VD I R+RK E P P + T+ G Sbjct: 196 LATFMSYPGRVWNRSQLIDKLWGEDFFGDERVVDTHIARLRKKIEPDPSAPTFVKTVVGV 255 Query: 62 GYRFCGD 68 GYRF + Sbjct: 256 GYRFEDE 262 >UniRef50_A7ZAG8 MrsR2 n=2 Tax=Bacillus RepID=A7ZAG8_BACA2 Length = 240 Score = 112 bits (281), Expect = 5e-24, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++FCE+P +I S+ ++ K + G E D TV V +RR+R+ E P P I T+ G+ Sbjct: 168 LIYFCEHPNQILSKHQIYKDVWG-EFYGGDSTVMVHVRRLREKLEEDPSRPRWIKTVRGQ 226 Query: 62 GYRFCGD 68 GY F + Sbjct: 227 GYIFEAE 233 >UniRef50_A5UYZ0 Two component transcriptional regulator, winged helix family n=17 Tax=Bacteria RepID=A5UYZ0_ROSS1 Length = 236 Score = 112 bits (281), Expect = 5e-24, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 39/66 (59%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ SR +LL +++G + +RT+DV IR +R E+ P P+ I T++G Sbjct: 159 ILATLMAAPGQVFSRLDLLDRVSGDAFEGSERTIDVHIRNLRAKIEADPRHPQYIETVYG 218 Query: 61 EGYRFC 66 GYRF Sbjct: 219 MGYRFA 224 >UniRef50_C9KN64 DNA-binding response regulator VicR n=2 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN64_9FIRM Length = 233 Score = 111 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 32/64 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+P + SR L +++ G E TV V I RIR+ E P P + TI G Sbjct: 164 LAFLAEHPNIVFSREALFERVWGAEALGDSATVMVHINRIREKIEEDPAHPRYLETIRGA 223 Query: 62 GYRF 65 GYRF Sbjct: 224 GYRF 227 >UniRef50_Q04N97 Response regulator n=6 Tax=Leptospira RepID=Q04N97_LEPBJ Length = 241 Score = 111 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PGK+ SR +L+ + G E +R +D ++RIR E PE I TI G Sbjct: 166 ILQLMAASPGKVFSREMILEAVWGMEWDGFERMIDSHVKRIRSKLEKNSAQPEWIETIWG 225 Query: 61 EGYRFCGDLED 71 GYRF + ++ Sbjct: 226 IGYRFTDNYDN 236 >UniRef50_C4L1R5 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L1R5_EXISA Length = 230 Score = 111 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +P ++ + ++ + + G D TV V I +IR+ E TP P II T+ G Sbjct: 166 ILAYFMRHPNQVLTVEQIYEAVWGEAAFEVDNTVMVHITKIREKLEDTPRKPTIIKTVWG 225 Query: 61 EGYRF 65 GYR Sbjct: 226 VGYRL 230 >UniRef50_A0PXH1 Transcriptional regulatory protein n=11 Tax=Clostridium RepID=A0PXH1_CLONN Length = 232 Score = 111 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN GK+ ++ ++ + + D + V I +R E P I TI G Sbjct: 164 ILFYLLENKGKVFTKKQIFEYVWEEPFYGDDNAIMVHISNLRDKIEDDSKNPHYIKTIRG 223 Query: 61 EGYRFCGDL 69 GY+ ++ Sbjct: 224 LGYKLDSNI 232 >UniRef50_Q067N9 Two component transcriptional regulator, winged helix family protein n=1 Tax=Synechococcus sp. BL107 RepID=Q067N9_9SYNE Length = 234 Score = 111 bits (280), Expect = 7e-24, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 40/65 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ SR +L+ ++ G + +TVDV IR +R+ E+ P P ++T+ G Sbjct: 170 LELFIQNPKRVWSRDDLIDQIWGVDYIGDRKTVDVHIRWLREKIEANPSDPTKLSTVRGF 229 Query: 62 GYRFC 66 GYRFC Sbjct: 230 GYRFC 234 >UniRef50_C8WVL8 Two component transcriptional regulator, winged helix family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WVL8_ALIAD Length = 233 Score = 111 bits (280), Expect = 7e-24, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 40/67 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +P ++ SR EL++++ G + + RT+D ++ +R E P +P I T++G Sbjct: 165 LVILSRHPRRVFSREELIERVFGMDFRGDVRTIDAHVKNLRAKIEDDPKSPVYIQTVYGM 224 Query: 62 GYRFCGD 68 GYRF GD Sbjct: 225 GYRFGGD 231 >UniRef50_D2RD26 Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RD26_GARVA Length = 296 Score = 111 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ++P ++ +R LL+++ G + RTVDV IRR+R + +I T+ Sbjct: 205 LKYFVQHPRRVFTRTHLLQEVWGYDYYGGTRTVDVHIRRLRAKLGVEYEH--LIGTVRNV 262 Query: 62 GYRFCGDLED 71 GYRF D Sbjct: 263 GYRFDPSESD 272 >UniRef50_B5YEK3 Response regulator DrrA n=5 Tax=Bacteria RepID=B5YEK3_DICT6 Length = 232 Score = 111 bits (279), Expect = 8e-24, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 35/71 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG++ +R ++K + G R VDV IR +R+ E P P+ I T+ Sbjct: 159 ILKLLLSSPGRVWTRDMIIKHIWGENFWGEPRAVDVYIRWLREKVEDDPSHPKYIITVRN 218 Query: 61 EGYRFCGDLED 71 GY+F ED Sbjct: 219 LGYKFQEGNED 229 >UniRef50_B0TE19 Transcriptional regulator, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TE19_HELMI Length = 234 Score = 110 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E P ++ + A++ + + G+E D TV V I R+R E P P+ + T+ G Sbjct: 167 LKYLAERPNRVVTIAQIYESVWGKEFIHDDNTVMVHISRLRNKIEEDPANPQRLQTVRGL 226 Query: 62 GYRFC 66 GYR Sbjct: 227 GYRLV 231 >UniRef50_UPI0001C164FC Two component Transcriptional regulator, Winged helix family n=2 Tax=Nostocaceae RepID=UPI0001C164FC Length = 259 Score = 110 bits (278), Expect = 1e-23, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG+ SR +L++K+ G + R VDV I ++RK E TPE I T+ G Sbjct: 187 ILHFLACHPGQAWSRPQLIQKIWGCDYVGDGRVVDVHIGQLRKKMEVDSSTPEFIKTVRG 246 Query: 61 EGYRFCGDLED 71 GY+F + Sbjct: 247 YGYKFESPEHN 257 >UniRef50_C4Z0U9 Two-component system, OmpR family, phosphate regulon response regulator OmpR n=3 Tax=Clostridiales RepID=C4Z0U9_EUBE2 Length = 238 Score = 110 bits (278), Expect = 1e-23, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 37/65 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGK+ SR LLK + G++ RTVDV +RR+R+ E+ P P+ + T G Sbjct: 173 LEILAVNPGKVYSRDNLLKAVWGQDYTGDARTVDVHMRRLREKIENNPSEPKYVHTKWGV 232 Query: 62 GYRFC 66 GY F Sbjct: 233 GYYFN 237 >UniRef50_UPI00017F4CF5 two-component response regulator n=2 Tax=Clostridium difficile RepID=UPI00017F4CF5 Length = 124 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N +I S+ +L K+ G + D T+ V IR+IR+ E P PE I TI G Sbjct: 55 ILSLFAHNQNQIISKEKLWDKVWGEDYVGFDNTIMVHIRKIREKLEDNPSKPEYILTIKG 114 Query: 61 EGYRFC 66 GY+ Sbjct: 115 LGYKLA 120 >UniRef50_C6CSM8 Two component transcriptional regulator, winged helix family n=6 Tax=Bacillales RepID=C6CSM8_PAESJ Length = 246 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK+ SR++LL ++ TV V +RR+R+ E P P I T+ G Sbjct: 176 LHLLAMYPGKVFSRSQLLNQVWDIAFDGDTTTVTVHVRRLREKIEPNPSDPTWIKTVWGI 235 Query: 62 GYRFC 66 GY+ Sbjct: 236 GYKLD 240 >UniRef50_C4IFN3 Transcriptional regulator n=15 Tax=Bacteria RepID=C4IFN3_CLOBU Length = 167 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G + ++ ++ + + D + IR++RK E PD P I TI G Sbjct: 99 ILYFLAQNQGTVFTKEQIYNAVWDEDYFLSDSNIMAFIRKLRKKIEPNPDEPIYIITIWG 158 Query: 61 EGYRFCGDL 69 GY+F +L Sbjct: 159 VGYKFNDNL 167 >UniRef50_A0KCT7 Two component transcriptional regulator, winged helix family n=55 Tax=cellular organisms RepID=A0KCT7_BURCH Length = 239 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PGK+ SR +LL + G + + ++ TV+ I R+R E+ P P I T+ G Sbjct: 168 LYFFARHPGKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAEPVRILTVWGR 227 Query: 62 GYRFCGD 68 GY+ Sbjct: 228 GYKLAAP 234 >UniRef50_P42244 Uncharacterized transcriptional regulatory protein ycbL n=84 Tax=Firmicutes RepID=YCBL_BACSU Length = 226 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 34/64 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP K+ ++ ++ + + E ++V +RR+R+ E P +P+ I T+ G Sbjct: 160 LCLFASNPKKVFTKEQIYRSVWNEEYFDDQNIINVHMRRLREKIEDDPSSPQYIKTLWGI 219 Query: 62 GYRF 65 GY+ Sbjct: 220 GYKL 223 >UniRef50_A8ZYB8 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYB8_DESOH Length = 234 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G +R LL +GR+ + DR++DV I RIRK E P P I T+ G Sbjct: 168 ILNALISHKGTPLTRDRLLDLASGRDFETFDRSIDVHISRIRKKLEDDPSAPRYIKTVWG 227 Query: 61 EGYRFC 66 +GY + Sbjct: 228 KGYMWA 233 >UniRef50_A9CWP6 Putative response regulator n=1 Tax=Shewanella benthica KT99 RepID=A9CWP6_9GAMM Length = 181 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++P ++ SR +LL+ + G ++ TV+ I R+R T +++ T+ G Sbjct: 109 LLFMAKHPKQVFSRMQLLEAVWGYSYSGYEHTVNSHINRLRAKLSHCASTADLVKTVWGV 168 Query: 62 GYRFCGDLE 70 GY+F + Sbjct: 169 GYKFSPPTQ 177 >UniRef50_Q63F03 Response regulator n=15 Tax=Firmicutes RepID=Q63F03_BACCZ Length = 240 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +NP +I S+A L + + G +D + V +R +R+ E P P + T+ G Sbjct: 169 ILLFLIKNPNQIFSKARLYEAVWGETYLGNDNIMMVHMRHLREKIEDNPSKPNYLITVRG 228 Query: 61 EGYRFCGDLE 70 GY+ + Sbjct: 229 LGYKLNTKGD 238 >UniRef50_C0Z8X3 Two-component response regulator n=3 Tax=Firmicutes RepID=C0Z8X3_BREBN Length = 240 Score = 109 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G++ ++A + + + G+E + + V I ++R+ E P P + TI G Sbjct: 173 ILSLLMKHAGRVFTKASIYEHVWGQEYIGDENLIMVYISKLREKIEDNPRKPVYLITIRG 232 Query: 61 EGYRFCG 67 GYRF Sbjct: 233 LGYRFEK 239 >UniRef50_UPI000050FEDE response regulator receiver protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FEDE Length = 327 Score = 109 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +R E+L + G + RTVDV +RR+R + I T+ Sbjct: 200 LKFFALHPERVFTRDEILLAVWGDDYFGGTRTVDVHVRRVRAKLGKDFENA--IHTVRYV 257 Query: 62 GYRFCGD 68 GYRF D Sbjct: 258 GYRFSPD 264 >UniRef50_D1YA87 Transcriptional regulatory protein, C-terminal domain protein n=2 Tax=Propionibacterium acnes RepID=D1YA87_PROAC Length = 237 Score = 109 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R LL + G + RTVDV IRR+R P+ I T+ Sbjct: 172 LKYLVGHPGRVLTRDLLLSDVWGYDYYGGTRTVDVHIRRLRAKVG--PEYEGHIQTVRSV 229 Query: 62 GYRFCGD 68 GYRF + Sbjct: 230 GYRFQAE 236 >UniRef50_A9KR75 Two component transcriptional regulator, winged helix family n=64 Tax=Firmicutes RepID=A9KR75_CLOPH Length = 238 Score = 109 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +P ++ +R +LL + G E RTVDV I+R+R+ + ++T+ G G Sbjct: 173 YFLASHPNQVFTREQLLDHIWGYEYIGDTRTVDVHIKRLREKIKDHISW--RLSTVWGIG 230 Query: 63 YRFC 66 Y+F Sbjct: 231 YKFE 234 >UniRef50_Q2S3D0 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3D0_SALRD Length = 253 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 38/68 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F E+ G+ SR +LL+ + G RT+D + +RK E TPD P + T++G Sbjct: 173 ILTYFIEHRGRTVSREQLLRDVWGISGDITTRTIDRHVASLRKKIEPTPDEPAYLQTVYG 232 Query: 61 EGYRFCGD 68 GY+F D Sbjct: 233 IGYKFVTD 240 >UniRef50_A5UPS1 Two component transcriptional regulator, winged helix family n=7 Tax=Chloroflexi RepID=A5UPS1_ROSS1 Length = 245 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G SR LL+++ G + +RT+DV +R +R+ E P P +I T+ G Sbjct: 162 LACLMHNAGVALSRDLLLERVWGSDFLGSNRTIDVHVRWLREKLEPDPANPTLIRTVRGI 221 Query: 62 GYRFCGDLED 71 GY F D Sbjct: 222 GYCFQDPATD 231 >UniRef50_C4W819 Two component transcriptional regulator, winged helix family n=3 Tax=Staphylococcus RepID=C4W819_STAWA Length = 225 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N +I S+ ++ K+ G E D T+ V IR +R+ E P+ P+ I T+ G+ Sbjct: 156 LYFFISNKNQILSKEQIYSKVWGYETFVDDNTLMVHIRTLRRKIEENPNQPKFIKTMRGK 215 Query: 62 GYRFCGD 68 GY F G+ Sbjct: 216 GYIFKGE 222 >UniRef50_B7CCF4 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B7CCF4_9FIRM Length = 233 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +NP +I S +L +K + T+ V IR +RK E P P I TI Sbjct: 167 ILSTLMKNPKQIFSAEQLYEKAWNEPYYYSANNTIMVHIRNLRKKIEKDPANPVYIKTIW 226 Query: 60 GEGYRFC 66 G+GYRF Sbjct: 227 GKGYRFE 233 >UniRef50_A8VSS8 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VSS8_9BACI Length = 229 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LHF ++P ++ + +L ++ + + TV V I +R+ E TP+ PE I T+ G Sbjct: 161 LLHFAKHPNQVWTHEQLYDRIWNLDATGYVETVKVHISHLRRKIERTPNRPEYIQTVRGF 220 Query: 62 GYRFCG 67 GYRF Sbjct: 221 GYRFVP 226 >UniRef50_A1HRL8 Two component transcriptional regulator, winged helix family n=2 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRL8_9FIRM Length = 231 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 42/67 (62%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR +L++K+ + ++RTVD I+ +RK ++PD P I TI+G Sbjct: 162 LELFLAHPGQVFSRLQLIEKVQDYAFEGYERTVDSHIKNLRKKLGASPDEPHYIKTIYGV 221 Query: 62 GYRFCGD 68 GY+ G+ Sbjct: 222 GYKLVGE 228 >UniRef50_C6PZ92 Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZ92_9CLOT Length = 235 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 38/65 (58%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NP K+ +++++ + G++ +D TV V I+R+R E D+PE I+T+ G Sbjct: 169 ILKLFLLNPNKVFTKSQIYDSIWGQDALRNDNTVMVHIKRLRDKIEHDADSPEYISTVWG 228 Query: 61 EGYRF 65 GY+ Sbjct: 229 VGYKL 233 >UniRef50_Q3Z7C3 Transcriptional regulator, putative n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z7C3_DEHE1 Length = 238 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R LL+ + G + RTVDV IRR+R + I T+ G Sbjct: 169 LKYLASNRGRVYTRESLLETIWGFDYYGGTRTVDVHIRRLRSKIGDF--NEKYIKTVRGV 226 Query: 62 GYRFCG 67 GY F Sbjct: 227 GYTFRA 232 >UniRef50_A1SKV6 Response regulator receiver n=7 Tax=Bacteria RepID=A1SKV6_NOCSJ Length = 232 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ SRA+LL+++ G + +R VDV IR +R P +IAT+ G Sbjct: 164 LHALVRAPGRVFSRAQLLEQVWGNDFYGDERVVDVHIRNLRAELGDDATDPHLIATVRGV 223 Query: 62 GYRFCGDLE 70 GY+F G Sbjct: 224 GYKFIGRPR 232 >UniRef50_C6CZ95 Two component transcriptional regulator, winged helix family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ95_PAESJ Length = 238 Score = 108 bits (272), Expect = 5e-23, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L C++ GK+ SR +LL + R VDV I +R E TPE I T+ Sbjct: 164 LLFLCKHRGKVLSRQQLLHGVWDYHFLGDTRIVDVHISHLRDKIEQNARTPEYIMTVRNV 223 Query: 62 GYRFCGD 68 GY+ Sbjct: 224 GYKLHAP 230 >UniRef50_A0Y0H8 DNA-binding response regulator n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y0H8_9GAMM Length = 241 Score = 108 bits (272), Expect = 5e-23, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F +P + SR +LL K+ G + ++ TV+ I R+R E TP II T+ G Sbjct: 173 LVYFARHPNHVFSRQQLLDKVWGYQHSGYEHTVNSHINRLRAKLELHQSTP-IIETVWGV 231 Query: 62 GYRFCG 67 GY+ Sbjct: 232 GYKLNP 237 >UniRef50_A9AXY0 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXY0_HERA2 Length = 225 Score = 108 bits (272), Expect = 6e-23, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P +I SR +LL+ + + DR++D I R+R+ E P+ I T++G Sbjct: 160 LATFMRHPNQILSREQLLEAVFAGDYAGFDRSLDAHIARLRQRIEHDRTNPQYIVTVYGL 219 Query: 62 GYRFC 66 GY+F Sbjct: 220 GYKFV 224 >UniRef50_C6LD48 DNA-binding response regulator ResD n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LD48_9FIRM Length = 238 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ +R +LL + G + RT+DV I+RIR+ + + T+ G Sbjct: 170 LYFLASSPNQVFTREQLLDHIWGYDYIGDARTIDVHIKRIREKIKD--HETWSLDTVWGV 227 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 228 GYKFRTAEE 236 >UniRef50_C5D1A0 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=C5D1A0_VARPS Length = 248 Score = 108 bits (271), Expect = 7e-23, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 42/68 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR LL++ GRE P DRT+DV + R+RK E+ PD P+I+ ++ G Sbjct: 178 LCAFARHPGRVLSRDFLLEQTRGREASPFDRTIDVQVGRLRKKIEADPDEPQIVKSVRGA 237 Query: 62 GYRFCGDL 69 GY + Sbjct: 238 GYILVPPV 245 >UniRef50_UPI0001692EE0 response regulator n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692EE0 Length = 230 Score = 107 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP + EL +K+ + RT+ V + +RK E P P+ I T+ G Sbjct: 165 LSLLASNPNHVFRIEELFEKVWSVDSLGDPRTLIVHVSNLRKKIEPNPADPKYIITVRGV 224 Query: 62 GYRFCG 67 GY+F G Sbjct: 225 GYKFNG 230 >UniRef50_B8G223 Two component transcriptional regulator, winged helix family n=11 Tax=Clostridia RepID=B8G223_DESHD Length = 234 Score = 107 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+P ++ +R +L M E T+ V IR++R+ E P P+ I T+ G Sbjct: 169 LTFMAEHPDQVFTREQLFAHMWRDEYVNDTSTITVFIRKLREKIERDPAKPQYIQTVWGI 228 Query: 62 GYRFC 66 GY+F Sbjct: 229 GYKFS 233 >UniRef50_Q67RH7 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67RH7_SYMTH Length = 231 Score = 107 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG +R LL ++ + TV V IRR+R+ E P P I T+ G Sbjct: 162 LWLMASHPGHPFTRESLLARVWHGDAPTDQSTVTVCIRRLREKIEDNPAQPRWIKTVWGI 221 Query: 62 GYRFCG 67 GY+F Sbjct: 222 GYKFDP 227 >UniRef50_B1YFK7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillales RepID=B1YFK7_EXIS2 Length = 230 Score = 107 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 38/67 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + HF +N ++ SR ELL + G +TVDV IRR+R+ E P P+ I T+ G Sbjct: 163 LCHFIKNEDQVMSRDELLDAVWGENYFGDRKTVDVNIRRLRQKIEENPAEPQFIETLWGH 222 Query: 62 GYRFCGD 68 GY++ + Sbjct: 223 GYKWRNE 229 >UniRef50_C0D8Y6 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C0D8Y6_9CLOT Length = 243 Score = 107 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F N G++ ++ +L + + G + + V I +R E P +P I T+ G G Sbjct: 176 KLFISNVGRVFTKEQLYELVWG-NSIVDENAIMVYISHLRNKIEDNPKSPRYIKTVWGLG 234 Query: 63 YRFC 66 Y+F Sbjct: 235 YKFT 238 >UniRef50_Q894P5 Transcriptional regulatory protein n=4 Tax=Clostridiales RepID=Q894P5_CLOTE Length = 231 Score = 107 bits (270), Expect = 1e-22, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 34/63 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LH + P ++ + EL + + G + TV V IRRIR+ E P P+ I T+ G Sbjct: 166 LLHMAQYPNRVFGKDELFESIWGLDSIGDSATVTVHIRRIREKIEFNPSKPQYIETVWGV 225 Query: 62 GYR 64 GYR Sbjct: 226 GYR 228 >UniRef50_C9YME3 Two-component response regulator n=32 Tax=Firmicutes RepID=C9YME3_CLODR Length = 247 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 39/68 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ ++ GKI ++ ++ +++ G E D + I R+RK E P +P+ I T+ G Sbjct: 180 LLYCAKHQGKILTKQQIYEEVWGEEYFYDDSNIMAIISRLRKKLEVNPSSPKYIQTVKGI 239 Query: 62 GYRFCGDL 69 GYRF ++ Sbjct: 240 GYRFNKEV 247 >UniRef50_C1XV31 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Meiothermus RepID=C1XV31_9DEIN Length = 256 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 38/68 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E G++ SR E+L ++ G ++ P RTVD I R+RK FE P P + T+ G Sbjct: 174 ILRLLAERAGEVVSRDEILDRVWGGDIFPSSRTVDNFIVRLRKLFEPDPAHPIYLHTVWG 233 Query: 61 EGYRFCGD 68 GYRF + Sbjct: 234 VGYRFTPE 241 >UniRef50_C3ALG3 Two-component response regulator n=5 Tax=Bacillales RepID=C3ALG3_BACMY Length = 238 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 33/69 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG+I ++ ++ + + D T+ V I R+R+ E P P + TI G Sbjct: 166 LKLFMGEPGRIFTKKQIFENVWSDHYYSDDNTIMVQISRLREKIEDHPRNPVYLKTIRGL 225 Query: 62 GYRFCGDLE 70 GYRF E Sbjct: 226 GYRFAKKEE 234 >UniRef50_Q24Q12 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24Q12_DESHY Length = 168 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ +R +L + G + T+ V IR++R+ E P PE I T+ G Sbjct: 103 LSFMANHPGQVFTRQQLFDNLWGEKYLGDSGTITVFIRKVREKVELDPGRPEYILTVWGV 162 Query: 62 GYRFCG 67 GY+F G Sbjct: 163 GYKFAG 168 >UniRef50_C2W6L0 Two-component response regulator n=5 Tax=Firmicutes RepID=C2W6L0_BACCE Length = 250 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C +P +I + +L +++ G D+TV + I ++RK E P P I + G Sbjct: 180 LTFLCTHPNRIFTAEQLYEQVWGLTSIGDDKTVVMHISKLRKKIEENPKLPTYIVNLRGI 239 Query: 62 GYRFCGDLED 71 GY+F ++ Sbjct: 240 GYKFIPHTKE 249 >UniRef50_Q897D5 Two-component response regulator n=8 Tax=Clostridiales RepID=Q897D5_CLOTE Length = 233 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + S ++ +++ E D TV V IR++R+ E P P+ + T+ G Sbjct: 166 ILELLARNKGIVFSIEKIYERVWKEEFFKSDNTVMVHIRKLREKIEENPRKPKYVKTVWG 225 Query: 61 EGYR 64 GY+ Sbjct: 226 VGYK 229 >UniRef50_C2EBW1 Two-component response regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EBW1_9LACO Length = 247 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G++ SR +LL+ + G ++ R VD+ I +R E+ P+TP I T G Sbjct: 176 LDYLAKHCGQVLSREQLLQGVWGYDILGTSRIVDIHISHLRDKLEADPNTPLWIKTNRGF 235 Query: 62 GYRFCGDLE 70 GY F G ++ Sbjct: 236 GYSFSGKIK 244 >UniRef50_C2E0K8 Response regulator PhoP n=9 Tax=Lactobacillus RepID=C2E0K8_9LACO Length = 238 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N G + SR +LL+K+ G +L R VD+ I +R E P+ I T G Sbjct: 174 LVYLAQNKGNVISREQLLQKIWGYDLLGSSRIVDIHISHLRDKLEDDSSHPQHILTKRGF 233 Query: 62 GYRFC 66 GYRF Sbjct: 234 GYRFI 238 >UniRef50_C0QG14 Response regulator, CheY-like receiver domain protein n=4 Tax=Bacteria RepID=C0QG14_DESAH Length = 247 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + P ++ SR +LL + GR DR+VDV I +R+ P P I T+ Sbjct: 176 LLTLAKFPARVLSRDQLLDAVAGRSYDVFDRSVDVHISSLRRKLGEDPRNPRFIQTVRTV 235 Query: 62 GYRFC 66 GY F Sbjct: 236 GYMFN 240 >UniRef50_Q3A924 DNA-binding response regulator n=3 Tax=Bacteria RepID=Q3A924_CARHZ Length = 236 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NPGK SR ELL+ G + ++RT+D I +RK E P PE I T+ G Sbjct: 162 LEAFLKNPGKAYSRLELLEYAIGEAYEGYERTIDTHISNLRKKIEKDPANPEYIQTVFGI 221 Query: 62 GYRFCGDLE 70 GY+ E Sbjct: 222 GYKLKPRGE 230 >UniRef50_Q01RV3 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q01RV3_SOLUE Length = 235 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NP + +R +L + G E P+ RTVD + ++R+ E P+TP+ T+HG Sbjct: 170 LTYFLHNPDRPLTRDMILNSVWGYEFFPNTRTVDAHVVKLRQKLEPDPNTPKHFLTVHGV 229 Query: 62 GYRFCG 67 GYRF Sbjct: 230 GYRFIP 235 >UniRef50_C8WP93 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WP93_EGGLE Length = 235 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 36/71 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +PG + S+ +L++ G+E ++ V I+++R+ E P P +I T+ G Sbjct: 164 IFFALASSPGLVLSKEQLVEAAWGKEFVGETSSITVFIKKLREKVEDDPSDPRVIQTVWG 223 Query: 61 EGYRFCGDLED 71 GYRF + + Sbjct: 224 IGYRFEPEGRE 234 >UniRef50_A7WWQ5 Transcriptional regulatory protein walR n=685 Tax=Bacteria RepID=WALR_STAA1 Length = 233 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 35/60 (58%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 + ++ G++ +R LL+ + G + RTVDVTIRR+R+ E P PE I T G GY Sbjct: 168 YLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGY 227 >UniRef50_C0WUJ3 Response regulator n=3 Tax=Lactobacillus RepID=C0WUJ3_LACBU Length = 242 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 + + ++ SR +LL+ + G + R VD+ I +R+ E P P+ + TI G GY Sbjct: 173 YLVGHENQVLSRDQLLQGVWGFDYSGQSRMVDIQIAHLREKIELDPKRPKYLKTIRGFGY 232 Query: 64 RFCGDLED 71 F +D Sbjct: 233 EFSTGGDD 240 >UniRef50_D0AFB3 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=D0AFB3_ENTFC Length = 103 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query: 2 MLHFC-ENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+F + G++ ++ +L + + G + P+ + IR++RK E PD P+ I T+ G Sbjct: 34 LLYFMYSHKGQVFTKEQLYQNVWGDDDIPNANNMTSFIRKLRKKIEPNPDNPQYILTVWG 93 Query: 61 EGYRFCGD 68 GY+F + Sbjct: 94 VGYKFSEE 101 >UniRef50_Q97MA9 Response regulator (CheY domain, HTH domain) n=1 Tax=Clostridium acetobutylicum RepID=Q97MA9_CLOAB Length = 235 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 34/64 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + EN I S+ +++ + + +D T+ V IR++R+ E P P+ I T+ G Sbjct: 170 LKYLVENKNIILSKEKIVNAVWEDDYVGYDNTIMVHIRKLRQKLEDDPSNPKYILTVKGL 229 Query: 62 GYRF 65 GY+ Sbjct: 230 GYKL 233 >UniRef50_B2A1Z8 Two component transcriptional regulator, winged helix family n=2 Tax=Firmicutes RepID=B2A1Z8_NATTJ Length = 233 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP ++ +R E+L+K+ G RTVD ++RIRK E +I T+ G Sbjct: 165 LYLLIKNPERVFTREEILEKIWGFSFAGGTRTVDEHVKRIRKKLEPESGFDSLIQTVWGV 224 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 225 GYKFEVKNE 233 >UniRef50_A1Z6C8 Response regulator receiver n=1 Tax=Sulfobacillus acidophilus RepID=A1Z6C8_9FIRM Length = 229 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR LL ++ G + RTVDV + R+R+ ++ E + T+ G+ Sbjct: 159 LYFLASHPKQVFSREHLLDRVWGLDFDGDSRTVDVHVTRLRQKLLASNTPYEYLETVWGQ 218 Query: 62 GYRFC 66 GYRF Sbjct: 219 GYRFV 223 >UniRef50_UPI0001C425A1 two component transcriptional regulator, winged helix family protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C425A1 Length = 233 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF-ESTPDTPEIIATIHG 60 + + P ++ +R +LL ++ G + RT+DV I+RIR+ E+ I TI G Sbjct: 165 LYYLASYPNQVFTRQQLLDQIWGYAFEGDPRTIDVHIKRIREKLTEADAKW--TIKTIRG 222 Query: 61 EGYRF 65 GY+F Sbjct: 223 VGYKF 227 >UniRef50_C4IAX3 DNA-binding response regulator n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAX3_CLOBU Length = 234 Score = 105 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 33/64 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG++ S+A+L + + G D T+ V I +R+ E P P+ I T+ G Sbjct: 166 ILAKLMKYPGRVYSKAQLYESINGEYCDSDDSTMMVHISNLREKIEEDPKNPKYIKTVRG 225 Query: 61 EGYR 64 GY+ Sbjct: 226 IGYK 229 >UniRef50_Q0HYY3 Two component transcriptional regulator, winged helix family n=6 Tax=Shewanella RepID=Q0HYY3_SHESR Length = 253 Score = 105 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL + G + TV+ I R+R P + E++ T+ G Sbjct: 180 LTFLARHPQQVFSRTQLLDAVWGYRFDGFEHTVNSHINRLRGKLAHIPGSRELVQTVWGV 239 Query: 62 GYRFC 66 GY+F Sbjct: 240 GYKFT 244 >UniRef50_Q2JED0 Two component transcriptional regulator, winged helix family n=72 Tax=Bacteria RepID=Q2JED0_FRASC Length = 321 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+ +R ELL+ + G TV V IRR+R+ E P P ++ T+ G Sbjct: 216 LAFLLRRPGRAFTRGELLEHVWGWSY-GDPSTVTVHIRRLREKIEDDPTAPRMLVTVWGV 274 Query: 62 GYRFCG 67 GYR+ Sbjct: 275 GYRYDP 280 >UniRef50_C7MNN6 Response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MNN6_CRYCD Length = 236 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ SR LL+++ G + RTVDV +RR+R + T+ G Sbjct: 173 LAFLAAHPGRTFSRDALLQRVWGFDYYGGSRTVDVHVRRVRSKLGPDLAH--HLETVRGV 230 Query: 62 GYRF 65 GY + Sbjct: 231 GYLW 234 >UniRef50_Q3Z7F8 Transcriptional regulator n=5 Tax=Dehalococcoides RepID=Q3Z7F8_DEHE1 Length = 223 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ SR LL K+ G + DRTVDV I R+R E T + T+ Sbjct: 158 LKFLAQNRGRVFSREALLNKVWGYDYYGGDRTVDVHITRLRGKIED--QTHTFVETVRNI 215 Query: 62 GYRF 65 GYRF Sbjct: 216 GYRF 219 >UniRef50_A6LQJ3 Two component transcriptional regulator, winged helix family n=4 Tax=Clostridium RepID=A6LQJ3_CLOB8 Length = 231 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK+ ++ ++ +++ + V + IR+ E P P I TI G Sbjct: 159 ILKLLVSNLGKVFTKKQIYEEVWEEAYFGDSNNIMVHLSHIREKIEDDPKNPIYIKTIRG 218 Query: 61 EGYR 64 GY+ Sbjct: 219 IGYK 222 >UniRef50_A6LVN5 Two component transcriptional regulator, winged helix family n=3 Tax=Firmicutes RepID=A6LVN5_CLOB8 Length = 228 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + S ++ +K+ G D TV V IR+IR+ E P+ P I T+ G Sbjct: 164 ILELLASNKGIVFSIEKIYEKIWGDVFFESDNTVMVHIRKIREKIEEEPENPRYIRTVWG 223 Query: 61 EGYR 64 GYR Sbjct: 224 VGYR 227 >UniRef50_C7M2G6 Putative two component transcriptional regulator, winged helix family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2G6_ACIFD Length = 217 Score = 105 bits (264), Expect = 5e-22, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ SR LL ++ G E RTVDV +RR+R +I T+ Sbjct: 153 LKFLASHPGKVFSRETLLSRVWGYEYYGGARTVDVHVRRLRAKLGE--AHEHLIHTVRSV 210 Query: 62 GYRF 65 GYRF Sbjct: 211 GYRF 214 >UniRef50_C7N7W6 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N7W6_SLAHD Length = 224 Score = 105 bits (264), Expect = 5e-22, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+I SR LL ++ G + RTVDV +RR+R P+ + I T+ G Sbjct: 161 LSFLATHPGRIYSREVLLSQVWGFDYYGGSRTVDVHVRRLRAKLG--PEVAQHIETVRGA 218 Query: 62 GYRFC 66 GY + Sbjct: 219 GYLWN 223 >UniRef50_B1C9A4 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9A4_9FIRM Length = 226 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ EN G++ +R ELL ++ G + + RT+D+ ++ +R S D + I TI G Sbjct: 161 ILLYMLENKGRVVTREELLNEVWGYDFEGESRTLDMHMKTLRNKIGSEDDKYKYIKTIRG 220 Query: 61 EGYRF 65 GY+ Sbjct: 221 IGYKL 225 >UniRef50_B0TDB2 Two-component response regulator n=3 Tax=Bacteria RepID=B0TDB2_HELMI Length = 235 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P ++ + EL ++ G + RTV I IRK ++ P PE I I G Sbjct: 170 LFFLAQHPNQVFTAQELYTRIWGYKDIGDYRTVMTHISNIRKKIKTDPSAPERIQNIRGF 229 Query: 62 GYRFC 66 GY+F Sbjct: 230 GYKFN 234 >UniRef50_A9WLJ1 Two-component response regulator n=4 Tax=Actinomycetales RepID=A9WLJ1_RENSM Length = 248 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 40/65 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++PG+++SR +LL+ + G E R VD +I+R+R E P P+I+ T+ G Sbjct: 181 LLELLQHPGQVRSREQLLRSVWGAEYLLDSRMVDASIQRLRSKNEDDPSNPQIVVTVRGF 240 Query: 62 GYRFC 66 GYRF Sbjct: 241 GYRFD 245 >UniRef50_B0S1J7 Two-component response regulator n=16 Tax=Clostridia RepID=B0S1J7_FINM2 Length = 239 Score = 104 bits (262), Expect = 7e-22, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP KI +R E+++ G + + DR +D I+ IR E P P I TI+G Sbjct: 169 IIKTLFSNPNKIFTRDEIIELSFGYDYEAFDRAIDTHIKNIRHKIEDNPKKPRYIKTIYG 228 Query: 61 EGYRF 65 GY+ Sbjct: 229 VGYKL 233 >UniRef50_Q5WGW1 Two-component response regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WGW1_BACSK Length = 228 Score = 104 bits (262), Expect = 7e-22, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +PG++ ++ EL + + RTV V ++ +R + P+ I T+ G Sbjct: 160 LLFLANHPGRVFTKEELYAAVWNGDGF-DSRTVTVHVKNVRHKLKDGTKHPKYIETVWGV 218 Query: 62 GYRFCG 67 GY+F G Sbjct: 219 GYKFIG 224 >UniRef50_C5CFK4 Two component transcriptional regulator, winged helix family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CFK4_KOSOT Length = 226 Score = 104 bits (262), Expect = 7e-22, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 5/70 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENPGK+ +R E+L ++ G + RTVDV I ++R+ S E I T+ G Sbjct: 160 LKLMIENPGKVFNRQEILDRVWGMDFFGDFRTVDVHISKLREKIGS-----EFIKTVRGV 214 Query: 62 GYRFCGDLED 71 GY+ ++ Sbjct: 215 GYKLVIPEDE 224 >UniRef50_C4L0X3 Two component transcriptional regulator, winged helix family n=10 Tax=Firmicutes RepID=C4L0X3_EXISA Length = 230 Score = 104 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 32/62 (51%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 H +N + SR LL + G +TVDV IRR+R+ E P P I T+ G GY Sbjct: 164 HLVQNEEIVLSRDALLDAVWGVNYFGDRKTVDVNIRRLRQKIEDDPSHPVYIETLWGHGY 223 Query: 64 RF 65 ++ Sbjct: 224 KW 225 >UniRef50_B8IVD0 Two component transcriptional regulator, winged helix family n=10 Tax=Alphaproteobacteria RepID=B8IVD0_METNO Length = 245 Score = 104 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 40/69 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG++ SR L+ GRE DR++D + R+R+ E+ P P++I ++ G Sbjct: 175 LAAMAKHPGRVLSRDMLMDLTRGREWDALDRSIDAQVVRLRRKLEADPKNPKLIKSVRGA 234 Query: 62 GYRFCGDLE 70 GY F G +E Sbjct: 235 GYVFAGRIE 243 >UniRef50_A6LXL2 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridiaceae RepID=A6LXL2_CLOB8 Length = 238 Score = 104 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 37/67 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NP ++ SR +L++K G + DRTVD I+ IR+ ES P I T++G Sbjct: 165 ILTVFLSNPTQVFSREKLVEKAFGANYEGFDRTVDSYIKNIRQKIESNHKEPTYITTVYG 224 Query: 61 EGYRFCG 67 GY+F Sbjct: 225 MGYKFIP 231 >UniRef50_Q26IA7 Transcriptional regulatory protein n=3 Tax=Bacteroidetes RepID=Q26IA7_9BACT Length = 238 Score = 104 bits (261), Expect = 9e-22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG+ SR+ELL + G ++ TV+ I R+R E P I T G Sbjct: 171 LILLANYPGRSYSRSELLDVIWGYNFSGYEHTVNSHINRLRAKIEPDMGNPIYILTTWGI 230 Query: 62 GYRFCGDL 69 GYRF D+ Sbjct: 231 GYRFNEDI 238 >UniRef50_B6FPY5 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPY5_9CLOT Length = 114 Score = 104 bits (261), Expect = 9e-22, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ + ++ + + G+E + V I IRK E P P I T+ G Sbjct: 46 ILFFLASYPGQVFTHRQIYETVWGKEYFCDEGNVTAHIGHIRKKIELDPRNPVFIQTVRG 105 Query: 61 EGYRFC 66 GY+F Sbjct: 106 IGYKFA 111 >UniRef50_C7ILM1 Two component transcriptional regulator, winged helix family n=3 Tax=Firmicutes RepID=C7ILM1_9CLOT Length = 232 Score = 104 bits (261), Expect = 9e-22, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 40/68 (58%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P KI +R ELL+ + G + R+VD+TI R+RK E +TP+ + TI+G Sbjct: 163 ILETLFKRPKKIFTRDELLEIVWGYDYSGDSRSVDMTIMRLRKKIEEDSETPKYVKTIYG 222 Query: 61 EGYRFCGD 68 GY+ GD Sbjct: 223 FGYQLGGD 230 >UniRef50_A9BR19 Two component transcriptional regulator, winged helix family n=30 Tax=cellular organisms RepID=A9BR19_DELAS Length = 252 Score = 104 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 40/67 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E G++ +R ++++ + GREL+ DR++DV + RIR E+ P P+ I T+ G Sbjct: 184 LVTLAERAGRVLTRDQIMEAVRGRELEAFDRSIDVHMGRIRAAIEADPKAPKRILTVRGV 243 Query: 62 GYRFCGD 68 GY F Sbjct: 244 GYVFAKQ 250 >UniRef50_A6LXW1 Two component transcriptional regulator, winged helix family n=5 Tax=Firmicutes RepID=A6LXW1_CLOB8 Length = 238 Score = 104 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 39/71 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + P K +R EL+ G + +DR VD ++ IR+ E+ P P+ I T+HG Sbjct: 165 ILMTLLKYPNKTFTREELISTALGDDYDGYDRNVDTHVKNIRQKIETNPKDPQYIITVHG 224 Query: 61 EGYRFCGDLED 71 GYRF G+ + Sbjct: 225 TGYRFGGEFNE 235 >UniRef50_B3E8G4 Two component transcriptional regulator, winged helix family n=4 Tax=Desulfuromonadales RepID=B3E8G4_GEOLS Length = 233 Score = 104 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ SR EL+ K G + ++R+VD I+ +R+ E PE I T++G Sbjct: 163 LQALAASPGRTYSRDELVSKALGYQFDGYERSVDAHIKNLRQKIELDSRKPEFIKTVYGI 222 Query: 62 GYRFCGDLE 70 GY F G+ + Sbjct: 223 GYLFSGERD 231 >UniRef50_P45606 Phosphate regulon transcriptional regulatory protein phoB n=201 Tax=Proteobacteria RepID=PHOB_SHIDY Length = 229 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR +LL + G + DRTVDV IRR+RK E ++ T+ G Sbjct: 163 LHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEP-GGHDRMVQTVRGT 221 Query: 62 GYRFCG 67 GYRF Sbjct: 222 GYRFST 227 >UniRef50_P0AA18 Transcriptional regulatory protein ompR n=242 Tax=Bacteria RepID=OMPR_ECO57 Length = 239 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P + SR +L+ GRE +R++DV I R+R+ E P P I T+ G Sbjct: 168 VLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWG 227 Query: 61 EGYRFCGD 68 GY F D Sbjct: 228 LGYVFVPD 235 >UniRef50_C0W5Y5 Response regulator n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W5Y5_9ACTO Length = 223 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R LL ++ G + RTVDV +RR+R + D +I T+ Sbjct: 157 LKYLAANQGRVLTRETLLDEVWGEDYIGGSRTVDVHVRRLRAKLGTEHDH--LIGTVRNV 214 Query: 62 GYRFCGDLE 70 GYR +E Sbjct: 215 GYRLDALVE 223 >UniRef50_B0MRC9 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRC9_9FIRM Length = 222 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ EN G+I ++ L ++ G + +T+ V I+R+R+ E P P+ I T+ G Sbjct: 156 LVLLIENKGRILTKEYLFNQIWGSDSFSEQQTLTVHIKRLRQKIEDDPKNPKHIQTVWGV 215 Query: 62 GYRFCG 67 GY++ Sbjct: 216 GYKYES 221 >UniRef50_A6BHI5 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHI5_9FIRM Length = 140 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 33/69 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG+I S+ ++ ++ + V IRRIRK E P I + G Sbjct: 70 ILYLLAKNPGRIFSKEQIYTQVWKEPYYGAEDNVMGIIRRIRKKIEPDSAKPRYILNVWG 129 Query: 61 EGYRFCGDL 69 GY+F G+L Sbjct: 130 MGYKFNGEL 138 >UniRef50_C2EDI8 Response regulator n=11 Tax=Firmicutes RepID=C2EDI8_9LACO Length = 243 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + ++PGKI S + + + TV V IR++R E P P+ I T+ Sbjct: 172 ILRLMMQHPGKIFSTQNIYESVWREPYFYTCGNTVMVHIRKLRTKIEPDPQKPQYIKTVW 231 Query: 60 GEGYRFC 66 G+GYRF Sbjct: 232 GKGYRFE 238 >UniRef50_Q0RNB1 Putative response regulator (Response regulator protein) (Partial match) n=1 Tax=Frankia alni ACN14a RepID=Q0RNB1_FRAAA Length = 309 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ +R +LL+++ G R +DV +RR+R+ E+ P P I T+ G Sbjct: 184 LCELAVAGGRAVTRKQLLERIWGYNYFGGARMLDVHVRRLRRKVEADPSAPTHILTVRGI 243 Query: 62 GYR 64 GYR Sbjct: 244 GYR 246 >UniRef50_C4G2P7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2P7_ABIDE Length = 257 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG++ S ++ ++ + + TV V IRR+R+ E +II T+ G Sbjct: 191 ILCLLASNPGRVFSTDDIFTRVWNEKAFEGNNTVMVHIRRLREKIEMDARNAKIIKTVWG 250 Query: 61 EGYR 64 GY+ Sbjct: 251 VGYK 254 >UniRef50_A9KHT5 Two component transcriptional regulator, winged helix family n=12 Tax=Bacteria RepID=A9KHT5_CLOPH Length = 233 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHGE 61 NP K+ +R LL + G + RTVD I+R+R + P I TI G Sbjct: 164 WTLASNPNKVFTRDNLLDSLWGFDYFGDSRTVDSHIKRLRAKL-DMLEHPNWSIKTIWGV 222 Query: 62 GYRFCGDLE 70 GY+F D + Sbjct: 223 GYKFEVDED 231 >UniRef50_A7ICZ4 Two component transcriptional regulator, winged helix family n=2 Tax=Alphaproteobacteria RepID=A7ICZ4_XANP2 Length = 255 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ +R LL R+ +P DR++DV + R+RK E+ P P+ I T+ G Sbjct: 185 LRVFLQNPNRVLTRDRLLDLAHDRDNEPFDRSIDVRVTRLRKKIEADPAKPQAIKTVRGV 244 Query: 62 GYRFCG 67 GY F Sbjct: 245 GYLFVP 250 >UniRef50_A9AWM9 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWM9_HERA2 Length = 232 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R LL ++ G + RTVDV IRR+R +I T G Sbjct: 166 LAYLASHPGQVFTREVLLGQVWGYDEYVDARTVDVHIRRLRSKLSEIDAESNLIQTEWGI 225 Query: 62 GYRFC 66 GYRF Sbjct: 226 GYRFI 230 >UniRef50_Q67J79 Two-component response regulator, CheY-like n=1 Tax=Symbiobacterium thermophilum RepID=Q67J79_SYMTH Length = 232 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR +LL ++ G + + RTVD I+ +R +I T+ G Sbjct: 164 LALLAAHPGQVFSREKLLDRIWGPDFQGDARTVDAHIKNLRDKLGEGAG---LILTVWGV 220 Query: 62 GYRFC 66 GYRF Sbjct: 221 GYRFA 225 >UniRef50_C8PCG6 DNA-binding response regulator n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PCG6_9LACO Length = 238 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN + SR +LL + + R VD+ I +R E+ P P++I T+ G Sbjct: 169 LKFLFENQNHVLSREQLLDGVWEYEDEYNTTRIVDMHISNLRDKIEADPANPQLIKTVRG 228 Query: 61 EGYRF 65 GY Sbjct: 229 LGYML 233 >UniRef50_D0WJB9 Transcriptional regulator n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJB9_9ACTN Length = 227 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P +I SR LL ++ G + RTVDV +RR+R P+ + I T+ G Sbjct: 164 LSFLVTHPDRIYSREVLLSQVWGFDYYGGSRTVDVHVRRLRAKLG--PEVAQRIETVRGA 221 Query: 62 GYRFC 66 GY + Sbjct: 222 GYLWS 226 >UniRef50_B2A0K7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B2A0K7_NATTJ Length = 246 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G++ +R +LL+K+ G + RTVDV IR +R+ P+++ T+ G Sbjct: 179 LNIMVTNSGQVLTREKLLEKIWGYDFLGDTRTVDVHIRHLRQKISEAGGPPDLVETVRGI 238 Query: 62 GYRF 65 GYR Sbjct: 239 GYRL 242 >UniRef50_C6IXU0 Transcriptional regulator domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXU0_9BACL Length = 265 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E+ G + SR ELL ++ G VDV I+ +RK P I T+ G Sbjct: 200 LIKLLEHEGTVLSREELLSEVWGTTFLGGSNVVDVHIKSLRKKLGDNASRPTYITTVRGV 259 Query: 62 GYRFC 66 GYR Sbjct: 260 GYRLA 264 >UniRef50_A5UT44 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=A5UT44_ROSS1 Length = 261 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFE--STPDTPEIIATIH 59 + +PG++ SR ELL+++ G + RTVDV + R+R E +I+T Sbjct: 174 LHLLASHPGRVFSREELLERVWGYSYMGNTRTVDVHVNRLRHKLELAGEGSCNNMISTEW 233 Query: 60 GEGYRFCGD 68 G GY+ Sbjct: 234 GAGYKLESP 242 >UniRef50_C7I0W4 Two component transcriptional regulator, winged helix family n=4 Tax=Proteobacteria RepID=C7I0W4_THIIN Length = 365 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +L+ + G E DR++DV + R+R+ E P P + TI G+ Sbjct: 295 LQAMVAHPNRVLSRDQLIDWLKGYERDAFDRSIDVRVARLRRKIEDDPARPVYVRTIRGQ 354 Query: 62 GYRFCG 67 GY F Sbjct: 355 GYLFNP 360 >UniRef50_Q0AWC5 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWC5_SYNWW Length = 227 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 39/68 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ENPG++ SR +L+++ G + ++RT+D I +R E+T + I T++G Sbjct: 159 ILLLLAENPGQVFSRLHILERVFGDIYEGYERTIDTHISNLRHKIEATGKSEISIKTVYG 218 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 219 IGYKLVAE 226 >UniRef50_D2LY16 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillus RepID=D2LY16_BACS4 Length = 228 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F ENP + SR +L++++ ++ DRT+D I+++R+ E P P+ I T+ G Sbjct: 162 LFYFMENPNIVLSREQLIQQIHPHTDVDILDRTIDAHIKKLREKIEDVPSKPKKIQTVRG 221 Query: 61 EGYRFC 66 GYRF Sbjct: 222 MGYRFV 227 >UniRef50_D1CA41 Two component transcriptional regulator, winged helix family n=3 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CA41_SPHTD Length = 310 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H ++ G SR L+++ G + VDV IRR+R+ E P +P + T+ G Sbjct: 163 ILAHLMQSSGTPVSRKRLIERTWGVDFLHESNRVDVYIRRLREKIEPEPSSPIYVRTVRG 222 Query: 61 EGYRFCGDLE 70 GY FC + Sbjct: 223 VGYVFCPPEK 232 >UniRef50_A7B4Z9 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A7B4Z9_RUMGN Length = 236 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP K+ SR L +++ D TV+V + +RK + I T+ G Sbjct: 171 ILYLLIQNPQKVYSREHLYEQVWKGGYYGEDNTVNVHVSNLRKKIQKADKEESYIKTVWG 230 Query: 61 EGYRFC 66 G++ Sbjct: 231 IGFKLE 236 >UniRef50_Q02A31 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q02A31_SOLUE Length = 231 Score = 102 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G+ +R +LL ++ G RTVDV + +R+ E P P + T+ G Sbjct: 163 LGYLIDHCGETVTREDLLTQVWGYSATTDTRTVDVHVAWLRQKLEENPKYPRYLQTVRGL 222 Query: 62 GYRFCGD 68 GY+ + Sbjct: 223 GYKLSDE 229 >UniRef50_A4AL32 Putative two-component system response regulator n=2 Tax=Actinobacteria (class) RepID=A4AL32_9ACTN Length = 266 Score = 102 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG+ SR +LLK + G E TV VT+RR+R+ E+ P P I+AT+ G Sbjct: 198 LAFLLKHPGQAFSREQLLKSVWGWEF-GDLSTVTVTVRRLREKIETDPTHPTILATVWGV 256 Query: 62 GYRFC 66 GYR Sbjct: 257 GYRLN 261 >UniRef50_C7H5J1 Two-component system response regulator (Fragment) n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5J1_9FIRM Length = 119 Score = 102 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +P + EL +K+ G+E RTV V I +R E P P + + G Sbjct: 47 ILTLFIRHPNTFFTANELYRKIWGKESLGDVRTVQVHIHNLRSKIEPDPAKPIYLKNVWG 106 Query: 61 EGYRFCGDLE 70 +GY F + E Sbjct: 107 KGYIFRPEGE 116 >UniRef50_Q1K367 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K367_DESAC Length = 233 Score = 102 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + + SR ++ + + G E DR+VD+ I R+R P P+++ T+ G Sbjct: 168 LWYLARHARTVLSRDQIYEALFGLEYNGVDRSVDIYISRLRNKLGEDPSRPQLLKTVRGV 227 Query: 62 GYRFCG 67 GY G Sbjct: 228 GYLLGG 233 >UniRef50_A6LXP4 Two component transcriptional regulator, winged helix family n=5 Tax=Clostridiales RepID=A6LXP4_CLOB8 Length = 227 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK+ +R ++++ G E DR++DV I+ +RK E +P+ I T+ Sbjct: 159 ILYILASNQGKVFTREAIIERAFGMEFDGSDRSIDVHIKNLRKKIEEDTKSPQYIVTVTK 218 Query: 61 EGYRF 65 GY+F Sbjct: 219 IGYKF 223 >UniRef50_A5ZNL8 Putative uncharacterized protein n=3 Tax=Ruminococcus RepID=A5ZNL8_9FIRM Length = 137 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 30/69 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ++PG+I + + + V I IR+ E P P I T+ G Sbjct: 66 ILLLLAKSPGRIFGKEMVYDLVWNEPYSGDYNVVMRHICNIREKIEDDPGQPLYIQTVRG 125 Query: 61 EGYRFCGDL 69 GYRF G+L Sbjct: 126 VGYRFNGNL 134 >UniRef50_Q5WBT6 Two-component response regulator n=3 Tax=Bacillaceae RepID=Q5WBT6_BACSK Length = 238 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + FCENP +I + A+L +++ G ++ ++TV + I ++RK P+II + G Sbjct: 165 LHFFCENPNRIFTTAQLYERVWGNDVFGEEKTVTIHISKLRKKLGDDTRKPKIIVNLRGI 224 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 225 GYKFIPPNE 233 >UniRef50_B2G959 Two-component response regulator n=13 Tax=Lactobacillus RepID=B2G959_LACRJ Length = 236 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G++ +R +L+ + G ++ R VD+ I +R E P + T+ G Sbjct: 172 LSYLVDHKGQVLNRDQLVNGVWGYDILDTSRIVDIHISHLRDKLEDDSQHPTHLLTVRGF 231 Query: 62 GYRFC 66 GY+F Sbjct: 232 GYKFV 236 >UniRef50_D0WFD8 DNA-binding response regulator VicR n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WFD8_9ACTN Length = 242 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+PG + S+ +L + G+E T+ V ++++R E P P II T+ G Sbjct: 168 IIRTLMEHPGVVFSKNQLTEAGWGKEFVGETTTITVFMKKLRSKVEDDPTDPRIIETVWG 227 Query: 61 EGYRFCGD 68 GYR D Sbjct: 228 VGYRLDAD 235 >UniRef50_Q1DCL7 DNA-binding response regulator n=6 Tax=Cystobacterineae RepID=Q1DCL7_MYXXD Length = 232 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + HF +PG+ +R ELL G + RTVD +R++R FE P+ P T+ G Sbjct: 167 LAHFLAHPGRTFTREELLSGAWGYHYEGSARTVDNFMRQLRLKFEPDPEAPRHFLTVRGL 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFE 231 >UniRef50_A5V0J0 Two component transcriptional regulator, winged helix family n=7 Tax=Chloroflexaceae RepID=A5V0J0_ROSS1 Length = 229 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G++ S +++L K+ G + + V V IRR+R E D P I T+ Sbjct: 161 LYYLMQNTGRVLSASQILSKVWGYDYEGESNLVAVYIRRLRAKIEPDIDAPRYIITVRNL 220 Query: 62 GYRFC 66 GY+F Sbjct: 221 GYKFV 225 >UniRef50_D1BL25 Two component transcriptional regulator, winged helix family n=3 Tax=Veillonella RepID=D1BL25_VEIPT Length = 229 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N + S+ EL ++ G + TV V I R+R+ E P + I T+ G Sbjct: 165 LEFLMRNRDIVFSKEELYSRVWGLDSYGDYATVAVHINRLREEIEDNPSDSKHIITVWGV 224 Query: 62 GYRFC 66 GY+F Sbjct: 225 GYKFV 229 >UniRef50_C0CI50 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CI50_9FIRM Length = 224 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +N G++ +R ++L+ + E +RT++V +RR+R+ E P P I T+ G Sbjct: 157 LEYFLKNRGQVLTREQILENVWDSYENFVDERTLNVNVRRLREKIEKDPKNPRYIVTMFG 216 Query: 61 EGYRF 65 GY++ Sbjct: 217 IGYKW 221 >UniRef50_C7N0N0 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=42 Tax=Bacteria RepID=C7N0N0_SLAHD Length = 240 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ SR EL++K+ G + + ++RT+D ++ +R P P+ + T+HG Sbjct: 168 LTTLSRYPGRVYSRMELVEKVLGYDFEGYERTIDSHVKNLRAKIGDNPRNPKWLHTVHGV 227 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 228 GYRFEDPTK 236 >UniRef50_Q01T10 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01T10_SOLUE Length = 237 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG + SR +LL + G++ DR VDV + R+R+ E P +P +I ++ G Sbjct: 165 LEFLMNRPGVVFSREQLLNAVWGQDRAITDRAVDVYVLRLRQKVEKDPASPILIHSVRGF 224 Query: 62 GYRFCG 67 GY F Sbjct: 225 GYTFEP 230 >UniRef50_C2D6V6 Possible response regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6V6_9ACTN Length = 238 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ SR +LL ++ G E RTVDV IRR+R P IAT+ G Sbjct: 175 LSFLVTHPGRAYSREKLLHQVWGFEYCGGTRTVDVHIRRVRSKVG--PQIASHIATVRGV 232 Query: 62 GYRF 65 GY F Sbjct: 233 GYLF 236 >UniRef50_UPI000196AEE3 hypothetical protein CATMIT_00609 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AEE3 Length = 238 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ +PG + S ++ K+ E + T+ V IR++R+ E P TP I T+ G Sbjct: 172 ILVLLASHPGTVFSTEDIYTKIWHEEATHANNTIMVHIRKLREKIERQPRTPRHIITVWG 231 Query: 61 EGYRFC 66 GY+F Sbjct: 232 IGYKFE 237 >UniRef50_A4FEZ3 Two-component response regulator n=4 Tax=Bacteria RepID=A4FEZ3_SACEN Length = 234 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +PG+ SRAELL+++ G TV V +RR+R+ E P P I T+ G Sbjct: 168 LVFLLRHPGRAFSRAELLEQVWGWSF-GDHSTVTVHMRRLREKVEPDPARPVRINTVWGV 226 Query: 62 GYRFCG 67 GYR+ Sbjct: 227 GYRYDP 232 >UniRef50_A6LVA4 Two component transcriptional regulator, winged helix family n=7 Tax=Firmicutes RepID=A6LVA4_CLOB8 Length = 234 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG++ S E+ +K+ E D TV V +R IR+ E P+ + + G Sbjct: 168 ILQLLMKNPGRVFSAEEIYEKVWNEEAINTD-TVMVHVRNIREKIEIDTKNPKYLKVVWG 226 Query: 61 EGYR 64 GY+ Sbjct: 227 VGYK 230 >UniRef50_Q38YC7 Two-component system, response regulator (Possibly involved in phosphate regulation) n=12 Tax=Lactobacillales RepID=Q38YC7_LACSS Length = 237 Score = 101 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F K+QSR +LL + G + R VD+ + +R+ E P P + T+ G Sbjct: 166 LVYFMHRLNKVQSREKLLNAVWGFDYPAETRMVDIQVSHLREKIEDNPRHPVYLKTVRGF 225 Query: 62 GYRFCGDLED 71 GY+ D Sbjct: 226 GYQLEDPAHD 235 >UniRef50_B1JFX2 Two component transcriptional regulator, winged helix family n=30 Tax=Bacteria RepID=B1JFX2_YERPY Length = 235 Score = 101 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + ++ G++ +R L + G + P RT+D I ++RK E P P +I T+HG Sbjct: 162 ILRYLYQHKGRVITRDMLFDAVWGYDHLPQSRTLDQHISKLRKTIELDPVHPVLIRTVHG 221 Query: 61 EGYRFCG 67 GYR+ G Sbjct: 222 AGYRYQG 228 >UniRef50_A8GAJ9 Two component transcriptional regulator, winged helix family n=54 Tax=Gammaproteobacteria RepID=A8GAJ9_SERP5 Length = 246 Score = 101 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 38/68 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++ K+ +R LL+ L+ DRT+DV I R+R+ E P PE+I TI G Sbjct: 172 LLALVQHARKVLTRDRLLELTHSETLEVFDRTIDVLIMRLRRKIEINPHQPELIRTIRGL 231 Query: 62 GYRFCGDL 69 GY F D+ Sbjct: 232 GYVFAADV 239 >UniRef50_A9AVR8 Two component transcriptional regulator, winged helix family n=6 Tax=Chloroflexi (class) RepID=A9AVR8_HERA2 Length = 248 Score = 101 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G++ R L +++ G E VDV +RR+R+ E P P I T+ G Sbjct: 179 LYFLAANSGQVFDREVLFREVWGYEYVGQTNLVDVCVRRLREKIEEQPSKPRRILTVRGV 238 Query: 62 GYRFC 66 GY+ Sbjct: 239 GYKLA 243 >UniRef50_C8QI30 Two component transcriptional regulator, winged helix family n=1 Tax=Pantoea sp. At-9b RepID=C8QI30_9ENTR Length = 248 Score = 101 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + K+ +R +LL+ L DRT+DV I R+R+ E P P +I TI G Sbjct: 168 LRALVCHARKVLTRDQLLELTHSETLDVFDRTIDVLIMRLRRKIEMNPHQPSLIRTIRGL 227 Query: 62 GYRFCGDL 69 GY F D+ Sbjct: 228 GYVFSADV 235 >UniRef50_B2V3E9 Transcriptional regulatory protein ResD n=5 Tax=Clostridiales RepID=B2V3E9_CLOBA Length = 233 Score = 101 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ SR E+L K+ G + R VD I+RIRK + I T++G Sbjct: 166 ILYLLATNEGRVLSREEILDKVWGYDYFGDTRVVDTQIKRIRKKIPEEGEK-WSIKTVYG 224 Query: 61 EGYRFC 66 GY+F Sbjct: 225 IGYKFE 230 >UniRef50_UPI0001C421AD two-component response regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C421AD Length = 246 Score = 101 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E PG++ S+ +L ++ ++ RTV V I+ +R+ P I T+ G Sbjct: 175 LLTLAEAPGQVFSKEQLYNRVWKQDDADDIRTVTVHIKNVRRKLGDGSKHPRFIDTVWGI 234 Query: 62 GYRFCGD 68 GY+F G Sbjct: 235 GYKFIGQ 241 >UniRef50_C6VZ09 Two component transcriptional regulator, winged helix family n=28 Tax=Bacteroidetes RepID=C6VZ09_DYAFD Length = 236 Score = 101 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P K+ SR ELL+K+ G ++ +RTVDV IR++R+ I T+ G Sbjct: 173 LFFLAQTPNKVFSRDELLQKIWGADIYVLERTVDVHIRKLREKLGD-----TYIKTLKGV 227 Query: 62 GYRFCGDLE 70 GY F + E Sbjct: 228 GYMFSNERE 236 >UniRef50_B2TJG9 Regulatory protein VanR n=6 Tax=Firmicutes RepID=B2TJG9_CLOBB Length = 231 Score = 101 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 33/64 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L N G + S ++ K++ + + TV V I R+R+ E P P+II T+ G Sbjct: 165 ILLLLANNLGTVFSAEDIFKEVWKEKYFEGNNTVMVHIWRLREKIEENPKEPKIIETVWG 224 Query: 61 EGYR 64 GY+ Sbjct: 225 VGYK 228 >UniRef50_C6C1C7 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfovibrio RepID=C6C1C7_DESAD Length = 232 Score = 101 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NPG+ +R +L+ + G++ DR++DV I ++R F+ PD I T+ G Sbjct: 166 LKALMDNPGRPMTRDDLMTSVWGKDFNAFDRSIDVHISKLRALFKPYPDHESRIKTVWGT 225 Query: 62 GYRFCGD 68 GY F + Sbjct: 226 GYMFVSE 232 >UniRef50_A5WBW4 Two component transcriptional regulator, winged helix family n=20 Tax=Gammaproteobacteria RepID=A5WBW4_PSYWF Length = 238 Score = 101 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+I SR ++ +++ G E DR++DV I RIR P+ P+ I T+ + Sbjct: 170 LWLLASNAGRILSREDIFERLRGIEYDGQDRSIDVRISRIRPKIGDDPENPKRIKTVRSK 229 Query: 62 GYRFCGD 68 GY F + Sbjct: 230 GYLFVKE 236 >UniRef50_B2A8D5 Two component transcriptional regulator, winged helix family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A8D5_NATTJ Length = 234 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P K+ SR L ++ G + RT+D I+ +R+ E P P I T+ G Sbjct: 167 ILSTLALYPKKVFSRENLADRIYGYLWEGDSRTIDTHIKNLRRKIEQNPKKPIFIKTVFG 226 Query: 61 EGYRF 65 GY+F Sbjct: 227 AGYQF 231 >UniRef50_Q2N765 DNA-binding response regulator n=8 Tax=Proteobacteria RepID=Q2N765_ERYLH Length = 248 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P K+ R LL + GRE DR VD + R+R+ E+ P I T+ G Sbjct: 173 LRAFLDHPKKVLDRDRLLDLVQGREAHLFDRAVDNQVSRLRRKIEADSRNPHFIQTVRGG 232 Query: 62 GYRFCGDL 69 GYRF D+ Sbjct: 233 GYRFAADV 240 >UniRef50_Q2BM87 DNA-binding response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BM87_9GAMM Length = 236 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++P +I SR +LL G P+DR++DV + R+RK E P PE+I T++G Sbjct: 170 LLALLKHPYQILSRDQLL----GENCVPYDRSIDVRMSRLRKKIEEDPQQPELIKTVYGA 225 Query: 62 GYRFCGDLE 70 GY F ++ Sbjct: 226 GYMFTSEVR 234 >UniRef50_C7N5H9 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5H9_SLAHD Length = 234 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P + +R ++L + G V V IR++R+ E+ P P I T G Sbjct: 169 ILLLMARRPNVVFTRQQILDSVWGYGYVGSSGVVAVFIRKLREKIEADPSRPVHIITEWG 228 Query: 61 EGYR 64 GYR Sbjct: 229 VGYR 232 >UniRef50_A8MLN3 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiaceae RepID=A8MLN3_ALKOO Length = 231 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F ENPG++ ++ +L + + D + V I ++RK E +P+ I T+ G G Sbjct: 168 KFFMENPGQVFTKEQLYENIWN-NSIIDDNAIMVYIHQLRKKLEDNVKSPKHIVTVWGIG 226 Query: 63 YRFCG 67 Y+F Sbjct: 227 YKFIA 231 >UniRef50_B0TCF4 Two-component response regulator resd n=4 Tax=Firmicutes RepID=B0TCF4_HELMI Length = 240 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFES-TPDTPEIIATIHG 60 +L+ +N G++ SR LL ++ G E RTVD +RR+R+ +P + T+ G Sbjct: 172 LLYLAQNAGRVLSRDLLLDRVWGYEFAGDSRTVDTHVRRLREKLSRISPAVASYVGTVRG 231 Query: 61 EGYRFC 66 GY+F Sbjct: 232 SGYKFE 237 >UniRef50_C9XMT9 Two-component response regulator n=94 Tax=Bacteria RepID=C9XMT9_CLODC Length = 238 Score = 100 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S E+ +++ D TV V +R IR+ E P P+ + + G Sbjct: 172 ILSLLMRNAGRVFSADEIYERVWNENAINTD-TVMVHVRNIREKIEIDPKNPKYLKVVWG 230 Query: 61 EGYR 64 GY+ Sbjct: 231 VGYK 234 >UniRef50_C6D6P8 Two component transcriptional regulator, winged helix family n=17 Tax=Firmicutes RepID=C6D6P8_PAESJ Length = 238 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P K+ S + +++ G TV V IR +RK + I T+ Sbjct: 171 ILYLLASHPKKVFSAEHIFQQVWGEAYYESGGNTVMVHIRTLRKKLGEDKQHQQWIKTVW 230 Query: 60 GEGYRFCG 67 G GY F G Sbjct: 231 GVGYAFQG 238 >UniRef50_A5N716 Transcriptional regulator n=15 Tax=Firmicutes RepID=A5N716_CLOK5 Length = 237 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ PGKI +R EL+ G+ K +DRT+D I+ +R E P PE I T+ G Sbjct: 170 ILITMIRYPGKIFTREELIIVTLGQNFKGYDRTIDSHIKNLRYKIEDNPKEPEYIVTMRG 229 Query: 61 EGYRF 65 GY+F Sbjct: 230 IGYKF 234 >UniRef50_A8SR47 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SR47_9FIRM Length = 239 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 35/64 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ EN G++ ++ +++ + G TV V +R +R+ E+ P P++I T+ G Sbjct: 172 LVYMAENRGRVLTKEQIMSAVWGLYSDVEPSTVAVHVRWLREKLETDPSHPQLIRTVWGT 231 Query: 62 GYRF 65 GY Sbjct: 232 GYVL 235 >UniRef50_D2SFJ3 Two component transcriptional regulator, winged helix family n=6 Tax=Actinomycetales RepID=D2SFJ3_9ACTO Length = 238 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ +R LL+++ G R V+V ++R+R E P+ PEI+ T+ G Sbjct: 172 LVALARKPRQVFTRELLLEQVWGYRHAADTRLVNVHVQRLRAKIERDPEKPEIVLTVRGV 231 Query: 62 GYR 64 GY+ Sbjct: 232 GYK 234 >UniRef50_Q1AZL3 Two component transcriptional regulator, winged helix family n=24 Tax=Bacteria RepID=Q1AZL3_RUBXD Length = 227 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR ++L + P VDV +R +R+ P P +I T+ G Sbjct: 158 LEYLMRHPRQVLSRQQILSAVWDYAFDPGSNVVDVYVRYLRRKL-DRPGEPSLITTVRGA 216 Query: 62 GYRFCGDLED 71 GYRF E+ Sbjct: 217 GYRFDPPREE 226 >UniRef50_Q1AYG8 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYG8_RUBXD Length = 229 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 36/65 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ R LL+++ G + +RTV+V ++R+R P P++I T+ G Sbjct: 161 LYTLARSPGRVFPRGTLLRQVWGEDEYIDERTVNVYVQRLRNKLGDDPSDPKLIETVRGF 220 Query: 62 GYRFC 66 GYR Sbjct: 221 GYRLV 225 >UniRef50_Q5SMC3 Response regulator n=4 Tax=Deinococci RepID=Q5SMC3_THET8 Length = 223 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 41/67 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + PG++ +R ELL+++ G E + +R VD +R +RK P+ P I T+ G Sbjct: 157 LLVFAQAPGRVFTRGELLERVWGPEFEGSERVVDAYVRLLRKKLRDDPEAPRFIETVVGL 216 Query: 62 GYRFCGD 68 GYRF GD Sbjct: 217 GYRFLGD 223 >UniRef50_C6PCZ0 Two component transcriptional regulator, winged helix family n=4 Tax=Clostridia RepID=C6PCZ0_CLOTS Length = 231 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG++ S+ ++ +K+ G + + TV I+ IR E+ E I T+ G Sbjct: 163 VLELLSLHPGQVFSKEQIYEKVWGFDAEGDTTTVTEHIKNIRAKIENLDPDTEYIKTVWG 222 Query: 61 EGYRFCG 67 GY++ Sbjct: 223 IGYKWEK 229 >UniRef50_D1PMF3 DNA-binding response regulator RegX3 n=3 Tax=Clostridiales RepID=D1PMF3_9FIRM Length = 239 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 36/70 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G I + L + + G++ ++ +++V IR +R+ E TP P + T+ G Sbjct: 169 ILQKLGENRGHIITYDALCEAVWGQDYYGYENSLNVHIRHLREKLEETPGKPRWLLTVRG 228 Query: 61 EGYRFCGDLE 70 GY+ G+ Sbjct: 229 IGYKLAGEAR 238 >UniRef50_C2H8S4 Response regulator n=8 Tax=Enterococcus RepID=C2H8S4_ENTFC Length = 244 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F ENP ++ S+ ++ + + E T+ V I +R E+ P + + TI G G Sbjct: 170 RFFMENPDQVFSKEQIYRSVWNDEHF-DANTIMVFINHLRNKIEADPKNAKYLKTIWGIG 228 Query: 63 YRFCGDLE 70 Y F D + Sbjct: 229 YTFLPDGD 236 >UniRef50_B6FYV2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYV2_9CLOT Length = 232 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 31/57 (54%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 N GK+ SR LL ++ G E RTVDV IR +RK E + I TI G GY+ Sbjct: 174 NRGKVLSRNFLLDEIWGYEYYGETRTVDVHIRYLRKKLEEAGADEKYIETIRGVGYK 230 >UniRef50_C9XR57 Two-component response regulator n=11 Tax=Clostridiales RepID=C9XR57_CLODC Length = 244 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N + SR ++L ++ G + VDV IRRIR E P P+ I TI G Sbjct: 176 IVKYLISNAKQSLSRDQILDEVWGTNYLYDFKIVDVNIRRIRNKIEDDPSKPKYIQTIWG 235 Query: 61 EGYRFCGD 68 GY F + Sbjct: 236 YGYCFRKE 243 >UniRef50_D2QGK1 Two component transcriptional regulator, winged helix family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGK1_9SPHI Length = 244 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK SR ++L + G ++ TV I R+R E P I T G Sbjct: 167 LTLLASYPGKSFSRQKILSLVWGYHHDGYEHTVTAHINRLRIKIEPDFTRPIYILTTWGI 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFA 231 >UniRef50_Q1J3D6 Two component transcriptional regulator, winged helix family n=4 Tax=Deinococci RepID=Q1J3D6_DEIGD Length = 244 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 32/64 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG +R LL+++ G + +R VDV I +R+ + P I T+ G Sbjct: 169 LFTLAQYPGLAWTRERLLERVWGVDYPRMERVVDVHITGLRRKLGDHAEHPRYIETVRGV 228 Query: 62 GYRF 65 GYRF Sbjct: 229 GYRF 232 >UniRef50_B4WME0 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WME0_9SYNE Length = 236 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R ++L+ + G + P VDV I+R+RK I ++ G Sbjct: 170 LEYLMRSPGRVFTRTQMLEHVWGYDFNPSTNVVDVCIQRLRKKI-DMKGNERWIESVRGV 228 Query: 62 GYRF 65 GYRF Sbjct: 229 GYRF 232 >UniRef50_B0MNE2 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0MNE2_9FIRM Length = 232 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 33/61 (54%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 N ++ SR ELL K+ G + RT+D+ I +RK + +I T+ G GYRF G Sbjct: 172 NRARVVSREELLTKVWGIDFVGETRTLDMHIGTLRKKLSDDAENAHLIKTVRGVGYRFIG 231 Query: 68 D 68 + Sbjct: 232 E 232 >UniRef50_C0X3L2 Response regulator n=22 Tax=Enterococcus faecalis RepID=C0X3L2_ENTFA Length = 240 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 F ENP ++ S+ ++ + G T+ V I R+R E P P + T+ G GY Sbjct: 171 FFLENPEQVFSKEQIYSSVWG-TGDVDANTIMVFINRLRSKLEENPKEPCYLRTVWGIGY 229 Query: 64 RFCGD 68 F D Sbjct: 230 TFTPD 234 >UniRef50_C0D765 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D765_9CLOT Length = 260 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +F N KI ++ ++ + + + D T+ V IRR+R E +P P + I G G Sbjct: 186 KYFLSNQNKILTKDQIYRYVWNDDF-VDDNTIMVHIRRLRMKIEDSPGHPVYLKNIRGMG 244 Query: 63 YRFCGD 68 Y+F + Sbjct: 245 YQFVAE 250 >UniRef50_Q2FY79 Transcriptional regulatory protein srrA n=168 Tax=Firmicutes RepID=SRRA_STAA8 Length = 241 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHG 60 +++ + P K+ R +LLK++ E RTVD ++R+R+ I T+ G Sbjct: 167 LIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAAHMIQTVWG 226 Query: 61 EGYRFCGDLED 71 GY+F D Sbjct: 227 VGYKFEVKSND 237 >UniRef50_A1SN97 Response regulator receiver n=41 Tax=Bacteria RepID=A1SN97_NOCSJ Length = 297 Score = 100 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E P + SR +L+ ++ G + + VDV I +R+ + + + T+ G Sbjct: 229 LATLAERPRLVFSRRQLIDRVWGEDWVGDEHLVDVHIGHLRRKLDDDASRGQYLRTVRGV 288 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 289 GYRMGTGEE 297 >UniRef50_Q5WKN6 Two-component response regulator n=2 Tax=Firmicutes RepID=Q5WKN6_BACSK Length = 227 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P + S +LL K+ + TV V + R+R+ E+ P+ P+ I + G Sbjct: 163 LQLFLEHPRHVFSYDQLLDKLW--DGVGDKHTVRVHLSRLREKIEANPNDPQYIVNVWGI 220 Query: 62 GYRFCG 67 GYRF G Sbjct: 221 GYRFEG 226 >UniRef50_B9YDA4 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDA4_9FIRM Length = 235 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G+ +EL + G+ RTV V I +RK E P P+++ ++ G Sbjct: 163 ILAFLMQHAGQCYKASELYNHIWGKSSYGDHRTVVVHIHNLRKKIEQDPAEPQLLQSVWG 222 Query: 61 EGYRFCGD 68 +GY F + Sbjct: 223 KGYCFIDE 230 >UniRef50_B2IIX2 Two component transcriptional regulator, winged helix family n=3 Tax=Proteobacteria RepID=B2IIX2_BEII9 Length = 237 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F E+ ++ +R +LL G DR++DV + R+R E P P +I T+ Sbjct: 167 LLAFAEHSQRVLTRDQLLDLARGLSHAAFDRSIDVQVSRLRHKLEDDPKKPSVIRTVRNG 226 Query: 62 GYRFCGDL 69 GY F + Sbjct: 227 GYIFTPVV 234 >UniRef50_Q49ZT8 Heme response regulator hssR n=7 Tax=Staphylococcus RepID=HSSR_STAS1 Length = 224 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ +R L++K+ G + + +RTVDV I+R+RK E + I T+ G Sbjct: 158 LFLLASNPRQVFNRDALIEKIWGFDYEGDERTVDVHIKRLRKRLEKIDAS-VTIHTVRGL 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_C6MYB5 DNA-binding response regulator n=2 Tax=Legionella RepID=C6MYB5_9GAMM Length = 247 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 43/69 (62%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F E+PG+I +R +L+ + ++ DRT+DV I R+RK E P P+++ TI G Sbjct: 177 LLIFLEHPGRILNRDQLMDLLYDKDCDSQDRTIDVLIGRLRKKIEQDPRNPQLLLTIRGG 236 Query: 62 GYRFCGDLE 70 GY+F ++ Sbjct: 237 GYQFKTKVD 245 >UniRef50_B8FQL7 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQL7_DESHD Length = 234 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + S L +++ G P + TV V IR +R+ E+ P P+ I T+ G Sbjct: 169 LAFLVRNRGTVFSVQNLYEQLLGESYLPSANNTVMVHIRNLRQKIEADPQHPKYILTVWG 228 Query: 61 EGYRFC 66 EGY+F Sbjct: 229 EGYKFA 234 >UniRef50_A4E8P8 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E8P8_9ACTN Length = 220 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P + SR LL ++ G E RTVDV IRRIR P I T+ G Sbjct: 157 LSFLATHPNRAYSREVLLHRVWGFEYCGGTRTVDVHIRRIRSKVG--PQIAAHITTVRGV 214 Query: 62 GYRF 65 GY F Sbjct: 215 GYLF 218 >UniRef50_C5D2L7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillaceae RepID=C5D2L7_GEOSW Length = 225 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++ G++ SR +LL ++ G + + RTVD I+ +R + D I T+ G Sbjct: 162 LLFLAKHHGQVFSREDLLAQVWGYDYTGNARTVDTHIKTLRMKLKQASD---FIQTVWGI 218 Query: 62 GYRFC 66 GY+F Sbjct: 219 GYKFE 223 >UniRef50_Q2S085 Response regulator DrrA n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S085_SALRD Length = 236 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 5/63 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR E+L ++ GR++ DRTVDV IR+IR+ S E I T+ G Sbjct: 176 LYFLASHPGRVFSRQEILDEVWGRDVYVVDRTVDVHIRKIREKIGS-----EYIETVKGV 230 Query: 62 GYR 64 GYR Sbjct: 231 GYR 233 >UniRef50_Q1J251 Two component transcriptional regulator PhoB n=5 Tax=Deinococci RepID=Q1J251_DEIGD Length = 229 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ +R ELL ++ G + +RTVD + ++R H P P + T+ G+ Sbjct: 159 LAFLTQNAGRVYTRTELLDRVWGADFLGGERTVDQHVTQLRAHLGDDPARPRFLETVRGK 218 Query: 62 GYRFCG 67 GYR Sbjct: 219 GYRMRP 224 >UniRef50_C7T954 Two-component response regulator n=10 Tax=Lactobacillus RepID=C7T954_LACRG Length = 228 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 31/64 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S E+ +++ +E +TV V + +R E D ++I T+ G Sbjct: 162 ILYLLASHPNRVFSADEIFERVWQQESIVSAKTVMVHVSHLRDKIEEATDGEKVIETVWG 221 Query: 61 EGYR 64 GY+ Sbjct: 222 VGYK 225 >UniRef50_C0WE14 Two-component system transcriptional regulator n=1 Tax=Acidaminococcus sp. D21 RepID=C0WE14_9FIRM Length = 234 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P ++ SR +LL+K G +RT+D IR +RK E P P I T++G Sbjct: 163 LDILASAPDRVFSRMQLLEKAMGGAYYEGAERTIDTHIRNLRKKLEPDPSQPIYIVTVYG 222 Query: 61 EGYRFCG 67 GY+F G Sbjct: 223 VGYKFQG 229 >UniRef50_C0GHG5 Two component transcriptional regulator, winged helix family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHG5_9FIRM Length = 237 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L N G+ R +LL+++ G E RT+D I+R+R+ + T+ G Sbjct: 167 LLILARNAGRTLKREQLLEQVWGYEYPGSTRTIDEHIKRLRQKISQLEPGYTFVQTVWGV 226 Query: 62 GYRFCGDLED 71 GY+ D Sbjct: 227 GYKLEVKEND 236 >UniRef50_Q3DDJ6 Phosphate regulon response regulator PhoB n=11 Tax=Bacteria RepID=Q3DDJ6_STRAG Length = 225 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F NP ++ +R ELL K+ G + RTVDV I +R +IAT+ G Sbjct: 160 LVLFFRNPNRVFTRQELLDKVWGEQFLGETRTVDVHIGTLRTKLGEDG---YLIATVRGV 216 Query: 62 GYRFC 66 GYR Sbjct: 217 GYRLE 221 >UniRef50_C0D2V9 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2V9_9CLOT Length = 229 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 HF N + S+ +L + ++ D TV VTIR +R+ E P +P+ + T++G GY Sbjct: 165 HFLHNVNHVFSKEQLYTAVW-KDNCVDDNTVMVTIRNLRQKIEDDPKSPKYLLTVYGIGY 223 Query: 64 RFC 66 +F Sbjct: 224 KFV 226 >UniRef50_Q2RUW2 Two component transcriptional regulator, winged helix family n=23 Tax=Proteobacteria RepID=Q2RUW2_RHORT Length = 249 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 38/65 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ +R LL ++ R+ P DRTVDV + R+R+ E+ P P I T+HG Sbjct: 166 LCCFASRPGRVMTRDNLLDYVSHRDWAPSDRTVDVLVGRLRRKIEADPKAPRHIITVHGI 225 Query: 62 GYRFC 66 GY F Sbjct: 226 GYVFA 230 >UniRef50_D0MGI0 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGI0_RHOM4 Length = 243 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 5/64 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ +R ELL ++ GR++ DRTVDV IR+IR+ S I T+ G Sbjct: 183 LYFLAAHPGKVFTRQELLDEVWGRDVYVVDRTVDVHIRKIREKLGS-----HYIETVKGV 237 Query: 62 GYRF 65 GY+F Sbjct: 238 GYKF 241 >UniRef50_A4XGM2 Two component transcriptional regulator, winged helix family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XGM2_CALS8 Length = 221 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +N ++SR E+L+K+ G + RTVDV I+++R+ + +I T+ G Sbjct: 156 LLFLAKNKDLVKSRDEILEKVWGFDFIGETRTVDVHIKQLREKLKDYK---FLIKTVWGV 212 Query: 62 GYRFCGDLE 70 GY+ D E Sbjct: 213 GYKLSEDKE 221 >UniRef50_B9CKZ5 Transcriptional regulator domain protein n=2 Tax=Atopobium RepID=B9CKZ5_9ACTN Length = 224 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P + SR LL+++ G E RTVDV +RR+R P I T+ G Sbjct: 161 LAFLANHPSRAYSREVLLQRVWGFEYCGGTRTVDVHVRRVRSKIG--PQAAAHIETVRGV 218 Query: 62 GYRF 65 GY F Sbjct: 219 GYLF 222 >UniRef50_C6J6L0 Response regulator n=2 Tax=Bacillales RepID=C6J6L0_9BACL Length = 241 Score = 99.8 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ PG + +R +L+ + G + RTVDV + +RK E P + I +I G Sbjct: 168 VLLYLARKPGVVMTRDDLMNAVWGFDYIGGQRTVDVHVSSLRKKLELDPQS-VHIDSIRG 226 Query: 61 EGYRFC 66 GY+ Sbjct: 227 VGYKLV 232 >UniRef50_A4IPQ9 DNA-binding response regulator n=16 Tax=Bacillales RepID=A4IPQ9_GEOTN Length = 222 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 34/64 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +F + +I ++ +L + + G D+T+ V IR +R+ E P PEII TI G Sbjct: 156 IFQYFLRHLNQILTKEQLYEGVWGEPYIEGDKTLMVHIRYLREKLEKDPKNPEIIETIRG 215 Query: 61 EGYR 64 GYR Sbjct: 216 IGYR 219 >UniRef50_Q4ZUU7 Response regulator receiver:Transcriptional regulatory protein, C-terminal n=18 Tax=Proteobacteria RepID=Q4ZUU7_PSEU2 Length = 259 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 38/66 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E P ++ SR +LL GR ++ DR++D+ + R+R+ P P++I T+ GE Sbjct: 190 LRVFLERPHRVLSREQLLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKNPQLIKTVRGE 249 Query: 62 GYRFCG 67 GY F Sbjct: 250 GYLFDA 255 >UniRef50_B0N9X7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0N9X7_EUBSP Length = 152 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 29/64 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G I S+ ++ + E D + IRR+RK E P PE I T+ G Sbjct: 82 ILYVLALHQGSILSKEQIYNFVWNGEYLWDDSNITSHIRRLRKKIEDDPSRPEYIQTVRG 141 Query: 61 EGYR 64 GYR Sbjct: 142 VGYR 145 >UniRef50_C0Z5U8 Two-component response regulator n=3 Tax=Firmicutes RepID=C0Z5U8_BREBN Length = 261 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ ++PG + SR +LL+++ G + RT+DV I++IR+ + P I T+ G Sbjct: 196 LVQLVKSPGSVWSREQLLEQVWGFDYFGDVRTIDVHIKKIRQRLDKLPYD--CIQTVWGI 253 Query: 62 GYRFCGD 68 GY+F D Sbjct: 254 GYKFGVD 260 >UniRef50_Q2SL72 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=56 Tax=Proteobacteria RepID=Q2SL72_HAHCH Length = 264 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ SR E+ + G E DR++DV + RIR P P I T+ + Sbjct: 197 LWLLASSAGRVLSREEIFTALRGIEYDGQDRSIDVRVSRIRPKIGDDPVHPRRIKTVRSK 256 Query: 62 GYRFCGD 68 GY F + Sbjct: 257 GYLFVKE 263 >UniRef50_B8FS97 Two component transcriptional regulator, winged helix family n=6 Tax=Firmicutes RepID=B8FS97_DESHD Length = 239 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Query: 1 AMLH-FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 +L EN G I + L + + G +L ++ T+ V IRR+R+ E P +P + T+ Sbjct: 168 ILLAKLYENRGSIVTGDSLCRAVWGDDLYGYENTLMVHIRRLREKIEPEPSSPRYLLTVR 227 Query: 60 GEGYRFCGDLE 70 G GY+ G +E Sbjct: 228 GLGYKLTGVVE 238 >UniRef50_B6WUI4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WUI4_9DELT Length = 254 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ SR ELL++ GR P+DR++DV I R+R P++I T+ G+ Sbjct: 168 LEIFLQNPQRVLSRDELLERTQGRNAVPYDRSIDVQISRLRTRLRDNGREPQLIKTVRGD 227 Query: 62 GYRFCGDLE 70 GY D+ Sbjct: 228 GYVLATDVR 236 >UniRef50_C7TA80 Two-component response regulator n=2 Tax=Lactobacillus rhamnosus GG RepID=C7TA80_LACRG Length = 218 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG + S+ + +K+ G + TV+V I+R+R + I T+ G Sbjct: 152 LKLLMIHPGHVFSKQAIYEKVWGESYIGDENTVNVCIKRLRDKIQD--VNQRYIRTVWGI 209 Query: 62 GYRFCGDLE 70 GY +E Sbjct: 210 GYVLEAGVE 218 >UniRef50_B1ZQC8 Two component transcriptional regulator, winged helix family n=6 Tax=Bacteria RepID=B1ZQC8_OPITP Length = 241 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ SR +L G + +DR++D+ + R+R+ P P I T+ G Sbjct: 172 LGYLARNRGRVMSRDRILDGTRGIDWDAYDRSIDILVSRLRQKLGDDPKRPTFIRTVRGV 231 Query: 62 GYRFCGDLED 71 GY F G + Sbjct: 232 GYSFIGGGRE 241 >UniRef50_B9XEM3 Two component transcriptional regulator, winged helix family n=1 Tax=bacterium Ellin514 RepID=B9XEM3_9BACT Length = 226 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG+ SR L + G P RTVD I +R ES P+ P I T+HG Sbjct: 161 LRLLSEAPGEPISRERFLDVVWGYAAFPTTRTVDNHIASLRAKIESDPEKPRWIKTVHGV 220 Query: 62 GYRFCG 67 GYR G Sbjct: 221 GYRLEG 226 >UniRef50_D2LRZ5 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LRZ5_BACS4 Length = 236 Score = 98.6 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + ++PG++ SRA+LL+K+ ++R++DV I+ +RK E P+ I T+ Sbjct: 161 IITIMAKHPGRVFSRADLLQKIQEDSFFEGYERSIDVHIKNLRKKLEVNTKQPKYILTVF 220 Query: 60 GEGYRFCGDLE 70 G GY+F G + Sbjct: 221 GMGYKFGGKRD 231 >UniRef50_B8CXQ9 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B8CXQ9_HALOH Length = 227 Score = 98.6 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ NPG++ +R +L KK+ G E K +DRT+D I+ IRK + ++I T++G Sbjct: 162 ILVTLIRNPGQVFTREQLAKKVMGLEYKGYDRTIDAHIKNIRKKL--NLEKNQLIITVYG 219 Query: 61 EGYRFCGD 68 GY+F GD Sbjct: 220 VGYKFEGD 227 >UniRef50_Q5NY91 Response regulator n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY91_AZOSE Length = 236 Score = 98.6 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 35/69 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENP + SR +L R++ P DR+VD+ + R+RK E P+ P I T+ Sbjct: 168 LKALVENPNRALSRERILNLSQQRDMDPFDRSVDLRVMRLRKKIEPDPEHPRFIRTVRNA 227 Query: 62 GYRFCGDLE 70 GY F E Sbjct: 228 GYVFVPSGE 236 >UniRef50_Q7NGM9 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NGM9_GLOVI Length = 229 Score = 98.6 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G+ R ++ +++ G + +RT+D I R+R E P P I T+HG Sbjct: 160 VLECLFRSAGQTVDREKIYQEVWGYDTAVTNRTIDFHIARLRSKLEDNPKEPRYILTVHG 219 Query: 61 EGYRFC 66 GYRF Sbjct: 220 SGYRFV 225 >UniRef50_C6D5Y8 Putative two component transcriptional regulator, winged helix family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5Y8_PAESJ Length = 255 Score = 98.6 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + G + +R + + G + VDV I+ +R+ + + P IAT+ G Sbjct: 186 LLMFLTSDGAVLTREAMFDAVWGSQYFGGSNVVDVHIKTLRRKLKDSAVAPHYIATVRGV 245 Query: 62 GYRFCGDLED 71 GYR + + Sbjct: 246 GYRLVEERGN 255 >UniRef50_Q07HV3 Two component transcriptional regulator, winged helix family n=8 Tax=Proteobacteria RepID=Q07HV3_RHOP5 Length = 245 Score = 98.6 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F E P + +R +LL +GR + DRT+D + R+R+ E P P+II T+ Sbjct: 174 LVAFLERPRFVLTREQLLDITSGRSAEVFDRTIDNQVSRLRRKIEDDPAHPKIITTVRSG 233 Query: 62 GYRFCGDLED 71 GY D+ + Sbjct: 234 GYSLAADVRE 243 >UniRef50_A5CZK5 Response regulator n=3 Tax=Clostridiales RepID=A5CZK5_PELTS Length = 240 Score = 98.6 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP + +L++ + R++ V I ++RK E P P+ I ++ G Sbjct: 167 ILALLAKNPNRFFGADQLMEVIWKTRESVDHRSLMVHISKLRKKIEEDPANPKFIISVRG 226 Query: 61 EGYRFCG 67 GY+F Sbjct: 227 FGYKFSS 233 >UniRef50_Q6F7B5 Two-component response regulator n=55 Tax=Bacteria RepID=Q6F7B5_ACIAD Length = 254 Score = 98.6 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++P + +R +L+ GRE +R++DV + R+R+ E P I T+ G Sbjct: 184 VLKALVQHPREPLTRDKLMNLARGREWGAMERSIDVQVSRLRRLIEDNPARARYIQTVWG 243 Query: 61 EGYRFCGD 68 GY F D Sbjct: 244 IGYVFVPD 251 >UniRef50_Q0SQL4 Two-component response regulator n=10 Tax=Firmicutes RepID=Q0SQL4_CLOPS Length = 233 Score = 98.6 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P KI +R E+++ + G + DR +D I+ +R E P+ I T++G Sbjct: 164 ILLCLSSYPKKIFTRDEIIELVLGDKSDSFDRVIDSHIKNLRGKIEENTRKPKFIVTVYG 223 Query: 61 EGYRFCG 67 GY+F G Sbjct: 224 VGYKFEG 230 >UniRef50_C5VNC3 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VNC3_CLOBO Length = 231 Score = 98.6 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 31/64 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F EN G SR +LL G + VDV IRR+R E P P+ + T+ G Sbjct: 165 LKIFIENIGISLSRDKLLDLAWGYNFVGDPKIVDVNIRRLRSKLEDDPSYPKYLQTVWGT 224 Query: 62 GYRF 65 GY + Sbjct: 225 GYIW 228 >UniRef50_Q2S514 Response regulator DrrA n=3 Tax=Rhodothermaceae RepID=Q2S514_SALRD Length = 237 Score = 98.6 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P K +R +LL+ + + +RTVD I+ +R+ I T+ G Sbjct: 168 LRYLVRHPRKAFTRQQLLETIWKDAMMVTERTVDAHIKNLREKLGDFAKH---IQTVRGV 224 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 225 GYRFVQEEE 233 >UniRef50_D1C280 Two component transcriptional regulator, winged helix family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C280_SPHTD Length = 240 Score = 98.6 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG++ SR LL ++ G + DRTVD I R+RK E I T+ G Sbjct: 169 LHLLAANPGRVFSRDYLLHRVWGEDYVGVDRTVDTHILRLRKKLGGPGSPAERIVTLWGV 228 Query: 62 GYRFC 66 GY++ Sbjct: 229 GYKYE 233 >UniRef50_C1SP47 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP47_9BACT Length = 234 Score = 98.6 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP + SR L ++TG + ++RTVD+++ R+R P +P+ I T+ G Sbjct: 163 ILSLMVRNPYILLSRDRLYNELTGFDCDAYNRTVDISVSRLRTKLNDDPKSPKYIKTVWG 222 Query: 61 EGYRFCGD 68 EGY F D Sbjct: 223 EGYMFIAD 230 >UniRef50_Q5HR28 Response regulator saeR n=60 Tax=Staphylococcus RepID=SAER_STAEQ Length = 229 Score = 98.6 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ S++ELL+K+ G + TV+V I RIR+ E P I T+ G Sbjct: 162 LWYLASREGEVISKSELLEKVWGYDYYEDANTVNVHIHRIREKLEKHDFLPYTITTVWGL 221 Query: 62 GYRFC 66 GY+F Sbjct: 222 GYKFE 226 >UniRef50_P0A5Z5 DNA-binding response regulator mtrA n=76 Tax=Bacteria RepID=MTRA_MYCBO Length = 225 Score = 98.2 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ +R LL+++ G R V+V ++R+R E P+ P ++ T+ G Sbjct: 159 LVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGV 218 Query: 62 GYR 64 GY+ Sbjct: 219 GYK 221 >UniRef50_Q0TNL1 DNA-binding response regulator n=8 Tax=Clostridium perfringens RepID=Q0TNL1_CLOP1 Length = 232 Score = 98.2 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+F +NP SR ++L + G E RTVDV +RR+R+ + EII TI G Sbjct: 166 LLYFLDNPNIALSRDQILDGVWGDEYFGDFRTVDVHVRRLRQKL----NNEEIIETIFGL 221 Query: 62 GYRFCGD 68 GY F G+ Sbjct: 222 GYMFKGE 228 >UniRef50_A9ASF4 Two component transcriptional regulator, winged helix family n=3 Tax=Burkholderia RepID=A9ASF4_BURM1 Length = 253 Score = 98.2 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ SR +LL+ + +DR++DV I R+R+ E P P I T+ G Sbjct: 172 LNAFLAAPGRVLSRDQLLESSRLYD-DVYDRSIDVQILRLRRKIEPDPSHPVFIRTVRGA 230 Query: 62 GYRFCGDL 69 GY + Sbjct: 231 GYVLDVPV 238 >UniRef50_C5D3X1 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=C5D3X1_GEOSW Length = 232 Score = 98.2 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + NP ++ +R +LL ++ G E RTVDV I+RIR I TI G G Sbjct: 165 YYLAMNPKQVLTRQQLLDRVWGYEFNGDPRTVDVHIKRIRDKLAEHKAK-WSIVTIRGVG 223 Query: 63 YRFC 66 YRF Sbjct: 224 YRFE 227 >UniRef50_Q2SNE0 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNE0_HAHCH Length = 244 Score = 98.2 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATI 58 + + E+ + SR ELL K+ G +L RTVD+ I ++R+ E+ P P+ + T+ Sbjct: 174 VLQYLHEHSERPVSREELLNKVWGYARDLDIETRTVDIHIAKLRRKIEADPKQPQRLVTV 233 Query: 59 HGEGYRF 65 G GYR Sbjct: 234 RGGGYRL 240 >UniRef50_A4J7U5 Two component transcriptional regulator, winged helix family n=89 Tax=Firmicutes RepID=A4J7U5_DESRM Length = 239 Score = 98.2 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 38/71 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N K SR ++L ++ GR + VDV IRRIR+ E+ P P + + G Sbjct: 166 IIKLFLHNVDKAISRDDILNQIWGRHYIGDLKIVDVNIRRIRQKIENDPSNPATLEKVWG 225 Query: 61 EGYRFCGDLED 71 GYR+ G +E+ Sbjct: 226 YGYRWRGGVEN 236 >UniRef50_UPI00016988BE Two component Transcriptional regulator, Winged helix family protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016988BE Length = 175 Score = 97.9 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+ G++ SR L++ G E DR++DV + R+R+ E P P + T+ G Sbjct: 107 LRVFLEHSGRVLSRDMLMEITKGYERSHLDRSIDVCVNRLRRKIEPNPSEPIYLRTVWGA 166 Query: 62 GYRFCGDLE 70 GY F + E Sbjct: 167 GYLFSRNGE 175 >UniRef50_C7N7D7 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=17 Tax=Bacteria RepID=C7N7D7_SLAHD Length = 232 Score = 97.9 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFEST-PDTPEIIATIHG 60 + ENPG+ +R++LLK + RTVD I+ +R+ P I TI G Sbjct: 164 LRKLMENPGRAFTRSQLLKDVWDVSFVGETRTVDTHIQTLRRKLNDAYPGAGNAIETIRG 223 Query: 61 EGYRFCGD 68 GYRF + Sbjct: 224 VGYRFSKE 231 >UniRef50_Q21DY6 Phosphate regulon transcriptional regulatory protein phoB n=3 Tax=Gammaproteobacteria RepID=Q21DY6_SACD2 Length = 234 Score = 97.9 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + ++ +R +LL + G + +RTVDV IRR+RK I T+ G Sbjct: 164 LEFFLTHQERVYTRNQLLDHVWGGNVYVEERTVDVHIRRLRKALSLEGHD-RFIQTVRGA 222 Query: 62 GYRFCGDL 69 GYRF + Sbjct: 223 GYRFSNKV 230 >UniRef50_D2MMT6 Putative regulatory protein VanR n=1 Tax=Bulleidia extructa W1219 RepID=D2MMT6_9FIRM Length = 232 Score = 97.9 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +NP K+ + ++ +++ E + T+ V IR +R+ E P P I + G Sbjct: 162 ILKYFIQNPKKLLTSQDIYQEVWKEEPIGSESTIAVHIRHLREKIEIDPSHPRYIKVVWG 221 Query: 61 EGYRFCGDLE 70 GY+ D E Sbjct: 222 RGYKAESDYE 231 >UniRef50_UPI0001C36ECD response regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36ECD Length = 226 Score = 97.9 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+ G+I + +L + G + TV V IR +R+ E P+ P+II T+ Sbjct: 159 LRTMMEHQGEIMDKNKLFDTVWGFDCFSEPSTVSVHIRWLREKIEDDPNEPKIIQTVWKA 218 Query: 62 GYRFCG 67 GYRF G Sbjct: 219 GYRFGG 224 >UniRef50_A5WB94 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=A5WB94_PSEP1 Length = 240 Score = 97.9 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 39/70 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG+I +R ELL K++GR +P DR++D I R+R+ E P P I T G Sbjct: 169 LAALLEKPGEIVTRDELLNKVSGRASEPFDRSIDNQISRLRRKIEPDPKNPIYIRTHWGG 228 Query: 62 GYRFCGDLED 71 GY F + + Sbjct: 229 GYAFVHLVSN 238 >UniRef50_Q4ZQ24 Response regulator receiver:Transcriptional regulatory protein, C-terminal n=9 Tax=Gammaproteobacteria RepID=Q4ZQ24_PSEU2 Length = 247 Score = 97.9 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ SR E+ + G DR++DV I RIR P P +I T+ + Sbjct: 169 LWLLVANAGRTLSREEIFTALRGVGYDGQDRSIDVRISRIRPKIGDDPIHPRLIKTVRSK 228 Query: 62 GYRFCGD 68 GY F + Sbjct: 229 GYLFVPE 235 >UniRef50_A7GA24 DNA-binding response regulator n=10 Tax=Clostridium RepID=A7GA24_CLOBL Length = 225 Score = 97.9 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP KI SR EL+ ++ + +DR +D I+ IR + P I TI G Sbjct: 159 ILFILARNPNKIFSREELMDYISRDNICIYDRIIDTHIKNIRAKLDQDSKNPTYIKTIRG 218 Query: 61 EGYRFC 66 GYRF Sbjct: 219 MGYRFN 224 >UniRef50_D0MGG0 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGG0_RHOM4 Length = 246 Score = 97.9 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ +R +LL+ + RT+D I IRK E P I T++G Sbjct: 168 VLRYLIHHRGEVVTREQLLRDVWHIVGDVETRTIDRHIASIRKKIEPDLRQPRYIETVYG 227 Query: 61 EGYRFCGDLE 70 +GYR + + Sbjct: 228 KGYRLRAEDQ 237 >UniRef50_B5I213 Regulatory protein n=3 Tax=Streptomyces RepID=B5I213_9ACTO Length = 221 Score = 97.9 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +NP ++ +R +L+ + G RTVDV I R+R+ + I T+ Sbjct: 154 LAHLVQNPHRVHTRDQLVTTVWGYGHVGDGRTVDVHIARLRRKLGADFRGA--IQTVRRV 211 Query: 62 GYRFCGDLED 71 GY++ D Sbjct: 212 GYKYTPPTGD 221 >UniRef50_Q1LHM7 Two component transcriptional regulator, winged helix family n=25 Tax=Proteobacteria RepID=Q1LHM7_RALME Length = 261 Score = 97.9 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F E+P ++ R L+ GR+L DR++D+ + R+R+ P +I T+ GE Sbjct: 192 LLTFIEHPNRVLDREMLINTARGRDLDVFDRSIDLLVSRLRQKLRDDPRDSALIRTVRGE 251 Query: 62 GYRFCGDLE 70 GY F G +E Sbjct: 252 GYVFTGTVE 260 >UniRef50_C6AWS7 Two component transcriptional regulator, winged helix family n=7 Tax=Rhizobiales RepID=C6AWS7_RHILS Length = 246 Score = 97.9 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L FC NP K+ +R +LL P +R++D I R+R+ E P I T+ Sbjct: 174 ILLAFCCNPNKVLTREQLLSMTHAGSAGPVERSIDAHISRVRQKIEPNLKDPTFIKTVRL 233 Query: 61 EGYRFCGDLE 70 GY F +E Sbjct: 234 GGYLFASKVE 243 >UniRef50_B9XFI9 Two component transcriptional regulator, winged helix family n=1 Tax=bacterium Ellin514 RepID=B9XFI9_9BACT Length = 226 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG+ +R ++L + G ++ +DR+VD + +R E+ P P +I TI Sbjct: 161 LEFFATRPGRALTRDQILDGVWGNDIVVNDRSVDRCVTTLRAKIETNPHQPVLIQTIRDV 220 Query: 62 GYRFCG 67 GYRF Sbjct: 221 GYRFES 226 >UniRef50_C4KB06 Two component transcriptional regulator, winged helix family n=18 Tax=Bacteria RepID=C4KB06_THASP Length = 242 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 42/69 (60%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + G++ SR +L+ + RE P+DRTVDV + R+R+ + P P +I T HG Sbjct: 174 LMALLSHAGQVLSRDQLMDAIHDREWTPNDRTVDVLVGRVRRKLDDNPADPRLILTAHGA 233 Query: 62 GYRFCGDLE 70 GY F G+L+ Sbjct: 234 GYLFAGELD 242 >UniRef50_Q1GLX1 Two component transcriptional regulator, winged helix family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GLX1_SILST Length = 238 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 38/65 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N G++ +R +LL++ R + DR++D+ I R+R+ E P PE I T+ G Sbjct: 174 LRVFAQNRGRVLNRDQLLEQAHDRGWEHFDRSIDLRISRLRRKIEQNPTKPETIRTVRGI 233 Query: 62 GYRFC 66 GY F Sbjct: 234 GYIFD 238 >UniRef50_A9VV65 Two component transcriptional regulator, winged helix family n=24 Tax=Bacillus RepID=A9VV65_BACWK Length = 236 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++P ++ SR++LL+ + + TV V + R+R+ E I T+ G Sbjct: 164 VLYVMAKHPKQVFSRSQLLELIWDFGHEGASNTVTVLVSRLREKLEKHTIKNHWIHTVWG 223 Query: 61 EGYRFCGDLED 71 GYRF + + Sbjct: 224 IGYRFEPNGRN 234 >UniRef50_D1CH01 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CH01_THET1 Length = 238 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ +++++ G + + V IRR+R P+ P I T G Sbjct: 163 LELLVRHAGQVLPHDLIMERVWGPTYVGDHQLLKVFIRRLRHKLGDDPEQPRYIQTEWGM 222 Query: 62 GYRFCGD 68 GYRF G Sbjct: 223 GYRFVGQ 229 >UniRef50_B0NH75 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NH75_EUBSP Length = 227 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +N ++ S+ L + + + D T+ V + R+RK E P+ I T+ G Sbjct: 162 IIRLFMDNVNRVFSKDALYEMVWDND-IVDDSTIVVYMNRLRKKLEEDFSNPKYILTVRG 220 Query: 61 EGYRFCG 67 GYRF Sbjct: 221 LGYRFVA 227 >UniRef50_B9CPY7 DNA-binding response regulator n=3 Tax=Staphylococcus RepID=B9CPY7_STACP Length = 225 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP I +R ++++K+ G + + DRTVDV I+R+R+ + I T+ G+ Sbjct: 159 LFLLVSNPKHIFTRNDIIEKIWGFDYEGDDRTVDVHIKRLRQKLSRLGAS-ISIHTVRGQ 217 Query: 62 GYRFCGDL 69 GY+ D+ Sbjct: 218 GYKVNQDV 225 >UniRef50_A0RCN7 Two-component response regulator n=65 Tax=Bacillus RepID=A0RCN7_BACAH Length = 247 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ + E+ + + + TV V I R+R E P P+ I + G Sbjct: 181 ILYLMAAAENRVFTIEEIYESVWKERAYESNNTVMVHIARLRNKIEENPKEPKFIQNVWG 240 Query: 61 EGYR 64 GY+ Sbjct: 241 VGYK 244 >UniRef50_A6G9H9 Two-component response regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9H9_9DELT Length = 230 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ENP ++ SR EL +K+ + P+ R VD I R+RKH E +P P ++ G Sbjct: 164 LRYFIENPNRVLSRQELQEKVWKLDNYPNSRMVDNFILRLRKHLEPSPKEPRYFVSVRGA 223 Query: 62 GYRFCGD 68 GY+F + Sbjct: 224 GYKFVPE 230 >UniRef50_Q3AEH2 DNA-binding response regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEH2_CARHZ Length = 226 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP +I ++ +++ ++ V V +RR+R+ E P +P II T+ G Sbjct: 160 LELLFKNPNRIFTKEQIMDRLWPDTFPEDPNIVSVLVRRLREKIEEDPSSPRIIKTVWGV 219 Query: 62 GYR 64 GY+ Sbjct: 220 GYK 222 >UniRef50_A7HMZ4 Two component transcriptional regulator, winged helix family n=7 Tax=Thermotogaceae RepID=A7HMZ4_FERNB Length = 229 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P ++ SR E+L+ + E DR VDV I +RK I T+ G Sbjct: 156 ILKLLAQRPDRVYSREEILETIWTDEYDVFDRVVDVHINSLRKKLGKD-----WIITVRG 210 Query: 61 EGYRFCGDLE 70 GY+F + Sbjct: 211 VGYKFSKKGD 220 >UniRef50_A5IKU4 Two component transcriptional regulator, winged helix family n=6 Tax=Thermotogaceae RepID=A5IKU4_THEP1 Length = 220 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L EN GK+ +R +LL+ E R VD I+RIRK E P+ P I TI G Sbjct: 153 ILLFLAENAGKVVTREKLLETFW--EDPVSPRVVDTVIKRIRKAIEDDPNRPRYIKTIWG 210 Query: 61 EGYRFCGDLE 70 GY F G Sbjct: 211 VGYMFTGGER 220 >UniRef50_B2GF54 Two-component response regulator n=14 Tax=Lactobacillus RepID=B2GF54_LACF3 Length = 229 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 31/64 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S ++ +++ +E +TV V + +R E+ ++I T+ G Sbjct: 162 ILYLLASHPNRVFSADDIFERVWQQESVVSAKTVMVHVSHLRDKIEAATGGEKVIETVWG 221 Query: 61 EGYR 64 GY+ Sbjct: 222 VGYK 225 >UniRef50_UPI00017890B9 putative two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017890B9 Length = 272 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ ++ G + +R +L+ K+ + VDV I+ +RK P IAT+ G Sbjct: 207 LMLLLDSEGAVCTREDLMCKIWDTDFMGGSNVVDVHIKSLRKKLNDNAGAPRYIATVRGV 266 Query: 62 GYRFC 66 GYR Sbjct: 267 GYRLA 271 >UniRef50_B1ZLF1 Two component transcriptional regulator, winged helix family n=23 Tax=cellular organisms RepID=B1ZLF1_METPB Length = 291 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P + SR LL R+ DR +DV I RIRK E P P I T+ G Sbjct: 223 LKAFADHPKRALSRERLLDLADARDPDAFDRAIDVRINRIRKKVEPDPANPRFIRTVRGL 282 Query: 62 GYRFCGDLE 70 GY F D + Sbjct: 283 GYIFRPDGD 291 >UniRef50_Q8VTU3 Putative response regulator RR23 n=1 Tax=Listeria monocytogenes RepID=Q8VTU3_LISMO Length = 225 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+I +R EL++++ R+ DRTVDV I+R+R HF+ I T+ G Sbjct: 159 LYQLASYPGRIFTREELIERIWQRDYDGSDRTVDVHIKRLRDHFDEE-KDGIRIVTVRGV 217 Query: 62 GYRFC 66 GY+ Sbjct: 218 GYKLE 222 >UniRef50_C0WM98 Possible response regulator n=3 Tax=Lactobacillus RepID=C0WM98_LACBU Length = 248 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + + SR ++ + G R +D I +RK E P P+++ TI G Sbjct: 172 LLFFISHSNTVLSRTQIASAVWGNTSGATLRIIDTHISNLRKKIEKQPKNPQMLKTIRGF 231 Query: 62 GYRFCGD 68 GY F + Sbjct: 232 GYLFKVE 238 >UniRef50_P54443 Uncharacterized transcriptional regulatory protein yrkP n=4 Tax=Bacillus RepID=YRKP_BACSU Length = 231 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + KI S + + + G+ + TV V IR++R E P P I T Sbjct: 163 ILKLLMNKRNKIFSAQNIYESVWGQPYFYCSNNTVMVHIRKLRSKIEDDPARPVYIKTEW 222 Query: 60 GEGYRFCG 67 G GYRF Sbjct: 223 GRGYRFGA 230 >UniRef50_A1SYE4 Two component transcriptional regulator, winged helix family protein n=4 Tax=Proteobacteria RepID=A1SYE4_PSYIN Length = 246 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ SR +LL+ + G E DRTVDV I R+R+ E +P I T G Sbjct: 174 LESLATRPKRVISREQLLEYLRGAEGDTFDRTVDVLISRLRQKLEINSRSPRYIRTERGI 233 Query: 62 GYRFCGDL 69 GY F ++ Sbjct: 234 GYSFSENV 241 >UniRef50_UPI000050FA0F putative two-component system response regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FA0F Length = 338 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L E P + SR ++ + G E R VDV I+R+RK + +I T+ G Sbjct: 277 VLLLLTEQPEHVYSREKIAFTVWGYEWAGDSRVVDVHIQRLRKKIGAN-----MIETVRG 331 Query: 61 EGYRFCG 67 GYRF G Sbjct: 332 FGYRFAG 338 >UniRef50_Q186H9 Two-component response regulator n=28 Tax=Bacteria RepID=Q186H9_CLOD6 Length = 233 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + CE+ GK+ EL + + G + ++ TV I R+R+ P+ I T+ G Sbjct: 167 ILWYLCEHQGKVVPSEELFEAVWGEKYLDNNNTVMAHIGRLREKIHEPSKNPKFIKTVWG 226 Query: 61 EGY 63 GY Sbjct: 227 VGY 229 >UniRef50_C4L340 Two component transcriptional regulator, winged helix family n=5 Tax=Bacillales RepID=C4L340_EXISA Length = 229 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N K+ SR +LL ++ G E + RTVD I+ +R I T+ G Sbjct: 165 LYLFITNDEKVFSREQLLDQIWGTEYHGNLRTVDTHIKTLRLKLGEAGG---YIQTVWGI 221 Query: 62 GYRFCGD 68 GY+F + Sbjct: 222 GYKFEAN 228 >UniRef50_C9LC31 Regulatory protein VanR n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LC31_RUMHA Length = 243 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 32/64 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P + ++ L + + G++ D T++V I ++RK E + I T+ G Sbjct: 178 LQLLIKHPKQTFTKESLYQLIWGKDYISDDNTLNVHISKLRKKLEHIGNQAPYIDTVWGI 237 Query: 62 GYRF 65 GY+ Sbjct: 238 GYKL 241 >UniRef50_Q2SPE2 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=18 Tax=Proteobacteria RepID=Q2SPE2_HAHCH Length = 226 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NPG++ +R LL+K+ P +DV I R+R + +TP ++ TI G Sbjct: 160 LEYFMRNPGQVLTRTMLLEKVWDYHFDPQTNVIDVHISRLRAKIDKDFETP-LLHTIRGA 218 Query: 62 GYRF 65 GY Sbjct: 219 GYVL 222 >UniRef50_D1BPS5 Two component transcriptional regulator, winged helix family n=3 Tax=Veillonella RepID=D1BPS5_VEIPT Length = 224 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + SR ++L + + + + +DV I+ +RK ++ + ++I T+ G Sbjct: 158 LFYLASNENIVLSRQQILDHVWEYDYESYSNLIDVYIKNLRKKIDTD-ENVKLIQTVRGV 216 Query: 62 GYRFCGD 68 GY + Sbjct: 217 GYVLKTE 223 >UniRef50_B1YK44 Two component transcriptional regulator, winged helix family n=5 Tax=Bacillales RepID=B1YK44_EXIS2 Length = 228 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N K+ SR +LL ++ G + + RTVD I+ +R + I T+ G Sbjct: 165 LHLFVQNNDKVFSREQLLDQIWGADYIGNLRTVDTHIKTLRLKLGEAGGS---IQTVWGI 221 Query: 62 GYRFC 66 GY+F Sbjct: 222 GYKFE 226 >UniRef50_C8PDN3 DNA-binding response regulator n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDN3_9LACO Length = 237 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ SR +LL+ + G E RT+D ++ +R+ E P +I T+ G Sbjct: 168 ILTILASSPTQVFSRKKLLELVWGNEYFGDARTIDTHVKTLRQKLEKVG--PHVIITVWG 225 Query: 61 EGYRFC 66 GY++ Sbjct: 226 VGYKYD 231 >UniRef50_C6IVK1 Response regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVK1_9BACL Length = 113 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR LL+++ + RTVD+ ++R+RK D I T++G Sbjct: 48 LALLAGHPGRVYSREALLEQVWDMDFAGGTRTVDMHVQRLRKKLGQWND---CIQTVYGI 104 Query: 62 GYR 64 GY+ Sbjct: 105 GYK 107 >UniRef50_D0KWS3 Two component transcriptional regulator, winged helix family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWS3_HALNC Length = 262 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E P ++ +R +++ + G E DR++DV I R+R+ E+ P P + TI GE Sbjct: 178 LQFFMERPNRVINRDQIMDYLKGYERSAFDRSIDVRITRLRRKIETNPTEPRYLVTIWGE 237 Query: 62 GYRFCG 67 GY F Sbjct: 238 GYLFAP 243 >UniRef50_A8MFP9 Two component transcriptional regulator, winged helix family n=16 Tax=Bacteria RepID=A8MFP9_ALKOO Length = 231 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+P K+ ++A L +++ E D TV+V I +R E I T+ G Sbjct: 165 ILELLMEHPKKVFTKANLFEQVWNDEFLGDDNTVNVHISNLRSKLAKADPATEYIHTVWG 224 Query: 61 EGYR 64 G++ Sbjct: 225 IGFK 228 >UniRef50_B1KWY3 DNA-binding response regulator n=33 Tax=Firmicutes RepID=B1KWY3_CLOBM Length = 237 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L EN G + SR LL+K+ + T++V I+R+R+ E P PE I T+ G Sbjct: 171 LLILVENKGNVLSRNILLEKIWDVDGSFVDGNTLNVYIKRLREKIEKDPKKPEYIETVRG 230 Query: 61 EGYRFC 66 GYR+ Sbjct: 231 IGYRWS 236 >UniRef50_B1XM84 Two-component response regulator n=8 Tax=Cyanobacteria RepID=B1XM84_SYNP2 Length = 241 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ +R ++L+ + G E + ++V IR +R E+ +I T+ G Sbjct: 175 LKYLMSHPQQVLTREQILENVWGNEFQGESNVIEVYIRYLRLKIEAKGQK-RLIQTVRGV 233 Query: 62 GYRFCGD 68 GY D Sbjct: 234 GYVLKKD 240 >UniRef50_UPI0001AEBD7C two component transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBD7C Length = 250 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTP---EIIATI 58 + +FC +P ++ SR +LL ++ G + ++ TV+ I R+R + +++ T+ Sbjct: 172 LDYFCRHPNQVFSRNQLLSEVWGYNHEGYEHTVNTHINRLRTKLDKINSIENGGQLVETV 231 Query: 59 HGEGYRFC 66 G GY+ Sbjct: 232 WGVGYKLN 239 >UniRef50_D0LUI4 Putative two component transcriptional regulator, winged helix family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUI4_HALO1 Length = 258 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ G++ +R +LL+K+ E RTVD+ +RR+R +I T+ Sbjct: 189 LRFLAQHRGRVFTRDQLLQKVWSYEYTGGTRTVDIHVRRVRAKLG---AQGTLIETVRNV 245 Query: 62 GYRFCG 67 GY+ Sbjct: 246 GYKMRA 251 >UniRef50_A6TT79 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiales RepID=A6TT79_ALKMQ Length = 232 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N GK+ SR EL+ K+ G + +DRT+DV I+ +R E + + I T++G Sbjct: 166 LSIFIQNSGKVFSRDELVVKVLGYDYVGYDRTIDVHIKNLRHKIEC--EYYKYIVTVYGV 223 Query: 62 GYRFCG 67 GYRF Sbjct: 224 GYRFVK 229 >UniRef50_Q04AR8 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=8 Tax=Bacteria RepID=Q04AR8_LACDB Length = 225 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG + SR E++ ++ RTVDV +R +R+ I T+ G Sbjct: 161 LKLLITHPGTVFSREEIMDQIWETGFYGETRTVDVHVRTLRQKLGEAGKH---IETVRGV 217 Query: 62 GYRF 65 GYR+ Sbjct: 218 GYRY 221 >UniRef50_B1YEH2 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YEH2_EXIS2 Length = 222 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ SR EL++ + G + DRTVDV I+R+R I T+ G Sbjct: 157 LHQLASFPGRVFSREELIEHVWGLDFMGDDRTVDVHIKRLRTRLHQ--TEAITIETVRGL 214 Query: 62 GYRFC 66 GYR Sbjct: 215 GYRLE 219 >UniRef50_A7X5Y5 Heme response regulator hssR n=71 Tax=Bacillales RepID=HSSR_STAA1 Length = 224 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P +I +R ++++K+ G + + +RTVDV I+R+R+ + T I T+ G+ Sbjct: 158 LFMLAARPKQIFTREQIIEKIWGYDYEGDERTVDVHIKRLRQRLKKLNATLT-IETVRGQ 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_B8JG70 Two component transcriptional regulator, winged helix family n=2 Tax=Cystobacterineae RepID=B8JG70_ANAD2 Length = 238 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G++ +R +LL G + DR++D I R+R P P ++ T+ G Sbjct: 168 LRVLAERAGRVLTREQLLDLTKGSADEAFDRSIDAHISRLRHKLGDDPRRPALLKTVRGA 227 Query: 62 GYRFCGDLE 70 GY E Sbjct: 228 GYVLAAGPE 236 >UniRef50_B7ILX3 DNA-binding response regulator n=102 Tax=Firmicutes RepID=B7ILX3_BACC2 Length = 230 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++F +N G + +R +L+ ++ G E DRTV+ IR +R + I T+ Sbjct: 165 ILVYFMKNQGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGE---KAKYITTVVR 221 Query: 61 EGYRFCGDL 69 GY+F G++ Sbjct: 222 TGYKFEGNV 230 >UniRef50_Q3K1Z3 DNA-binding response regulator n=9 Tax=Bacteria RepID=Q3K1Z3_STRA1 Length = 234 Score = 96.3 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG+I ++ +L +K+ GR L+ + T+ V I IR E P+ I T+ G Sbjct: 163 ILHILMSSPGRIYTKTQLYEKINGRYLEGDETTIMVHISNIRDKIEDDSKYPKYIKTLRG 222 Query: 61 EGYR 64 GY+ Sbjct: 223 VGYK 226 >UniRef50_A9KM61 Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM61_CLOPH Length = 224 Score = 96.3 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L+ ++P + ++ EL + G T++V IR++R+ E P+ PEII TI G G Sbjct: 161 LYLFQHPNIVITKDELFANVWGDAFFSDG-TLNVHIRKLREKIEKDPNNPEIIKTIWGTG 219 Query: 63 YR 64 YR Sbjct: 220 YR 221 >UniRef50_C2V3X6 Two component transcriptional regulator, winged helix n=4 Tax=Bacillus cereus RepID=C2V3X6_BACCE Length = 233 Score = 96.3 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN K SR ELL K+ G + + +DV I R+R+ E++P PE + T+ G Sbjct: 162 ILRYLMENSMKPISRNELLNKIWGINCVGNTKVIDVNINRLRQKIETSPSNPEFLLTVRG 221 Query: 61 EGYRFC 66 +GYR+ Sbjct: 222 KGYRWN 227 >UniRef50_A9VUJ1 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus weihenstephanensis KBAB4 RepID=A9VUJ1_BACWK Length = 225 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 34/65 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN GK SR ELL ++ G + + V IRR+R+ E P P+ + T+ G Sbjct: 160 ILRCLMENQGKPISRDELLNEIWGVNYVVKTKVIGVNIRRLRQKIEPNPSGPQFLRTVWG 219 Query: 61 EGYRF 65 +GY + Sbjct: 220 KGYVW 224 >UniRef50_Q251C7 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q251C7_DESHY Length = 231 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PGK+ +R +L+ + G+E + ++ V IRRIR+ E P P ++ T+ Sbjct: 165 IIALMANHPGKVFTREDLIDCIWGKEFETGSISIPVYIRRIREKIEQDPSEPTLLKTVWR 224 Query: 61 EGYRF 65 GY+ Sbjct: 225 FGYKL 229 >UniRef50_A7HL55 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=A7HL55_FERNB Length = 229 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +N ++ S+ E+L + G + D TV+V + IRK +PE+I TI G Sbjct: 162 LLYLAKNKDRVVSKEEILDAVWGIDYYGSDNTVEVYVNYIRKKL-----SPELIKTIRGV 216 Query: 62 GYRFCGD 68 GY+ G+ Sbjct: 217 GYKLVGE 223 >UniRef50_A0PYF5 Two-component response regulator n=8 Tax=Firmicutes RepID=A0PYF5_CLONN Length = 234 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +N K+ ++ EL + + ++ + T+ V ++ +R+ + P+ I T+ G Sbjct: 165 LVVLAQNEHKVFTKKELYENVWNQDNLEGNNTITVHVKGLRQKLKDNVKNPKYIQTVWGT 224 Query: 62 GYRFCGD 68 GY+F G+ Sbjct: 225 GYKFIGE 231 >UniRef50_C6B8S5 Two component transcriptional regulator, winged helix family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B8S5_RHILS Length = 219 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ FC+NPG+I SR ELL P +R++DV I R+R E P P +I T+ Sbjct: 148 LVVFCQNPGRILSREELLASTHAGLAGPIERSIDVHISRLRHKIEDNPHNPILIKTVRMG 207 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 208 GYFFAAVVE 216 >UniRef50_Q01YI3 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=Q01YI3_SOLUE Length = 225 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F G++ SR +L+ GR+ R VD I +R+ P P + + G Sbjct: 160 LDVFIRARGRVLSRDQLIAATWGRDTFTSARIVDNHIANLRRKIGDDPAEPRYLRNVRGL 219 Query: 62 GYRFCG 67 GYRF G Sbjct: 220 GYRFDG 225 >UniRef50_B8DS40 Two component transcriptional regulator, winged helix family n=29 Tax=Proteobacteria RepID=B8DS40_DESVM Length = 275 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + P ++ SR +LL GR + DR++DV + R+R P+II T+ G+ Sbjct: 173 LRFFLKYPNRVMSRDQLLDLTQGRAAEAFDRSIDVLVSRLRTRLRDNGREPQIIKTVRGD 232 Query: 62 GYRFCGDLE 70 GY D+E Sbjct: 233 GYYLATDVE 241 >UniRef50_A8DJW5 Transcriptional regulatory protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJW5_9BACT Length = 242 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ G++ +R LL ++ G + RT+DV IRR+R+ I T G Sbjct: 163 LKLLAQSKGRVLTREYLLDRVWGIDYDGETRTLDVHIRRVRQKLGIDG----YIETAVGI 218 Query: 62 GYRFC 66 GYRF Sbjct: 219 GYRFV 223 >UniRef50_UPI0001C31E43 two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31E43 Length = 251 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++++R ELL+ + G R +DV +R +R+ E PD+P I T+ G Sbjct: 185 LEALMADPGRLRNRQELLRAIWGDSAYRDPRAIDVHVRHLREKLEPEPDSPRHIVTVRGA 244 Query: 62 GYRFCG 67 GYR Sbjct: 245 GYRLQA 250 >UniRef50_Q182M4 Two-component response regulator n=14 Tax=Clostridiales RepID=Q182M4_CLOD6 Length = 242 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN + ++ +LL+ + D T+ V IRR+R+ E P P+ I T+ G Sbjct: 170 LKYLMENSMQTLTKEQLLESLWDSSGNFVDDNTIAVNIRRLRQKVEKNPSEPKYIKTVRG 229 Query: 61 EGYRF 65 GY + Sbjct: 230 VGYMW 234 >UniRef50_C1D266 Putative response regulator, OmpR n=1 Tax=Deinococcus deserti VCD115 RepID=C1D266_DEIDV Length = 700 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 NPG++ +RAE+L ++ E R +D ++++R+ I T+ G GY Sbjct: 157 LLARNPGRLYTRAEILDRVWESEYVGDGRVIDTYVKKLRQKLSVD-----CIETVRGLGY 211 Query: 64 RFCGDL 69 RF D+ Sbjct: 212 RFATDV 217 >UniRef50_Q4HSL5 Phosphate regulon response regulator PhoB n=3 Tax=Campylobacterales RepID=Q4HSL5_CAMUP Length = 224 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N ++ SR +LL+ + G RT+D+ I+ +R+ I TI G Sbjct: 160 LGFLLKNQNRVFSRDDLLEILWGYSYSGESRTIDIHIKTLRQKLGIAS---RFIKTIRGV 216 Query: 62 GYRFCGD 68 GY+ D Sbjct: 217 GYKISKD 223 >UniRef50_A5N471 VanR n=21 Tax=Bacteria RepID=A5N471_CLOK5 Length = 232 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + C N G++ S EL ++ G + + TV V IR +R+ + + P+ I T+ Sbjct: 165 ILWVLCSNRGRVVSSEELFHEVWGDKYFTNSNNTVMVHIRHLREKMHGSAEHPKYIKTVW 224 Query: 60 GEGYR 64 G GY+ Sbjct: 225 GVGYK 229 >UniRef50_A6TKQ5 Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ5_ALKMQ Length = 236 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P ++ R EL++ + G + + DR +D+ I+R+RK +S I T+ G Sbjct: 167 LKYLMMYPNQVFKREELIEGIWGWDFEGEDRVIDLYIKRLRKRLKSKTKQSWSIKTVWGI 226 Query: 62 GYRFCGD 68 GY+F + Sbjct: 227 GYKFEVE 233 >UniRef50_P35163 Transcriptional regulatory protein resD n=162 Tax=Bacteria RepID=RESD_BACSU Length = 240 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFES-TPDTPEIIATIHG 60 + + P K+ R +LLK++ E RTVD ++R+R+ +P+ + I T+ G Sbjct: 171 LYFLAKTPDKVYDREKLLKEVWQYEFFGDLRTVDTHVKRLREKLNKVSPEAAKKIVTVWG 230 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 231 VGYKFEVGAE 240 >UniRef50_A0RK71 DNA-binding response regulator n=69 Tax=Bacillus cereus group RepID=A0RK71_BACAH Length = 232 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ + + +++ + TV V IR +RK ++I T+ G Sbjct: 166 ILYLLASHPKKVYNVENIFQQVWADDYFEGGNTVMVHIRTLRKKLGEDKRKNKLIKTVWG 225 Query: 61 EGYRFCG 67 GY F G Sbjct: 226 VGYTFNG 232 >UniRef50_C1I3L5 Alkaline phosphatase synthesis transcriptional regulatory protein phoP n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3L5_9CLOT Length = 227 Score = 95.9 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N K+ SR +L+ + RTVD+ IRRIR ++ P +I T+ G Sbjct: 164 LEFFVQNRNKVFSREQLIDNIWEFSYDGDIRTVDIHIRRIRSKLDTNG-HPSVIETVFGV 222 Query: 62 GYR 64 GY Sbjct: 223 GYM 225 >UniRef50_A1R850 DNA-binding response regulator n=45 Tax=Actinobacteria (class) RepID=A1R850_ARTAT Length = 253 Score = 95.9 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ +R LL+++ G R V+V ++R+R E P+ PE++ T+ G Sbjct: 188 LVALARKPWQVFTRELLLEQVWGYRHAADTRLVNVHVQRLRSKIERDPEAPEVVLTVRGV 247 Query: 62 GYR 64 GY+ Sbjct: 248 GYK 250 >UniRef50_C7H3Q1 KDP operon transcriptional regulatory protein KdpE n=2 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3Q1_9FIRM Length = 143 Score = 95.5 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 36/70 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++PGK+ ++ ++ + + ++ + + R V TI RIR+ E D P I T+ Sbjct: 66 VLSLMAQHPGKLFTKEQIFEAVWHKDSESYLRAVTSTIGRIRQKIEDDKDHPRYIKTVSN 125 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 126 IGYQFVPSSE 135 >UniRef50_C7LSY9 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfovibrionales RepID=C7LSY9_DESBD Length = 231 Score = 95.5 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 F N GK+ SR +LL G E + + RTVD +RR+RK D + T+ G GYR Sbjct: 167 FVRNEGKVLSREQLLSNAWGYEFEGYSRTVDTHVRRLRKKLGPYAD---WLETVRGIGYR 223 >UniRef50_C9ZHF5 Putative regulatory protein n=6 Tax=Streptomyces RepID=C9ZHF5_STRSW Length = 202 Score = 95.5 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +P ++ +R +L+ + G RTVDV I R+R+ + I T+ Sbjct: 135 LAHLVAHPHRVHTRDQLVTTVWGYGHVGDGRTVDVHIARLRRKLGAEFRQA--IQTVRRV 192 Query: 62 GYRFCGDLE 70 GY++ L+ Sbjct: 193 GYKYTPPLD 201 >UniRef50_UPI0001C42B3F two component transcriptional regulator, winged helix family protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42B3F Length = 231 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E+ G++ +R LL + G + + +RTVD I+ +R + + +I T+ G Sbjct: 167 LLFLFEHQGQVFTREHLLTSVWGLDYEGTERTVDTHIKTLRMKLKPYGN---VIQTVWGI 223 Query: 62 GYRFC 66 GY+ Sbjct: 224 GYKLV 228 >UniRef50_Q12T20 Two component transcriptional regulator, winged helix family n=11 Tax=Gammaproteobacteria RepID=Q12T20_SHEDO Length = 225 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+P K+ SR L + + P +DV I ++R+ FE PE+I T+ G Sbjct: 159 LKYLMEHPNKVISRTLLFEAVWDYHFDPRTNVIDVHIAKLRRKFEEIG-FPEMIETVRGA 217 Query: 62 GYRFCG 67 GYR Sbjct: 218 GYRLSK 223 >UniRef50_C7H8D4 Two-component response regulator n=12 Tax=Bacteria RepID=C7H8D4_9FIRM Length = 299 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ N G SR ++L+K+ + DRTVD ++ +R H IAT+ G Sbjct: 233 LVFLASNKGIALSREKILQKVWNYDYFGEDRTVDTHVKMLRGHLG---KCRGYIATVWGI 289 Query: 62 GYRFCGD 68 GY+F D Sbjct: 290 GYKFDPD 296 >UniRef50_A6TM13 Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TM13_ALKMQ Length = 231 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +PGK+ SR +LL K+ G R +D+ I +RK ++I TI G Sbjct: 167 LLLFVTHPGKVFSRDDLLTKLWGESFVSETRVIDMHISSLRKKL--DDSDNQLIETIRGV 224 Query: 62 GYRF 65 GYR Sbjct: 225 GYRL 228 >UniRef50_A1B7Z0 Two component transcriptional regulator, winged helix family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B7Z0_PARDP Length = 255 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG++ SR +LL R P+DR+VDV I +IR+ P I TI G Sbjct: 188 LSVLAQRPGRVLSRDQLLDLTVSRHWSPYDRSVDVMIGKIRRKIGDNGPEPRRIRTIRGT 247 Query: 62 GYRFCGD 68 GY F + Sbjct: 248 GYMFSPE 254 >UniRef50_D1VT63 Regulatory protein VanR n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT63_9FIRM Length = 233 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP K+ S + + + +TV V IRRIR+ E P P I G Sbjct: 163 ILEFLMKNPNKVFSIESIYEHVWNEPAI-EAKTVTVHIRRIREKIEVDPKRPMYIQVAWG 221 Query: 61 EGYRFC 66 GY+F Sbjct: 222 LGYKFV 227 >UniRef50_A6M2A3 Two component transcriptional regulator, winged helix family n=13 Tax=Clostridium RepID=A6M2A3_CLOB8 Length = 242 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G + +R +LL ++ G + RTVDV IRR+R + I+ T+ G Sbjct: 179 LSYLYKNKGIVFNRQQLLNEVWGYDYYGDTRTVDVHIRRLRANLGDD-KENSIVETVFGV 237 Query: 62 GYR 64 GY Sbjct: 238 GYV 240 >UniRef50_A6X2C4 Two component transcriptional regulator, winged helix family n=59 Tax=cellular organisms RepID=A6X2C4_OCHA4 Length = 255 Score = 95.2 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G++ +R LL+ + P +DV I R+R E D P ++ T+ G Sbjct: 179 LEYLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIEKGFDGP-LLHTVRGA 237 Query: 62 GYRFCG 67 GY Sbjct: 238 GYMLKA 243 >UniRef50_B2V706 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=B2V706_SULSY Length = 224 Score = 95.2 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ +R +L DRTVDV I RIRK P P+ I ++ G Sbjct: 159 LSMLIKNKGRVLTRDYILDNSIYLNYDSIDRTVDVIIGRIRKKIGDDPKNPKYIISVRGF 218 Query: 62 GYRFC 66 GY+F Sbjct: 219 GYKFE 223 >UniRef50_B1WRX4 Two component transcriptional regulator n=11 Tax=Cyanobacteria RepID=B1WRX4_CYAA5 Length = 225 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR ++L+++ G + ++V +R +R E+ +I T+ G Sbjct: 161 LEYLMSHPKQVLSRDQILERVWGYDFMGDSNIIEVYVRYLRLKLEAE-QEKRLIQTVRGV 219 Query: 62 GYRF 65 GY Sbjct: 220 GYVL 223 >UniRef50_UPI0001C379A1 regulatory protein VanR n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C379A1 Length = 239 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 32/68 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ENP K+ S+A L + + G D TV V + IR+ + E I T+ G Sbjct: 163 ILQLMLENPTKLWSKANLFESVWGENYLSDDNTVKVHMSNIRQKLKKLDPDTEYIETVWG 222 Query: 61 EGYRFCGD 68 GYR GD Sbjct: 223 MGYRLVGD 230 >UniRef50_Q07HK8 Two component transcriptional regulator, winged helix family n=13 Tax=cellular organisms RepID=Q07HK8_RHOP5 Length = 258 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + FCE G++ SR LL+ G DR++DV + RIR+ E+ P +I T+ Sbjct: 179 LRAFCERAGRVLSREVLLELTQGPNCGSFDRSIDVLVSRIRRKIEADPADALMIKTVRSG 238 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 239 GYMFTPVVE 247 >UniRef50_Q2JPV2 DNA-binding response regulator n=17 Tax=Bacteria RepID=Q2JPV2_SYNJB Length = 230 Score = 95.2 bits (237), Expect = 7e-19, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+P ++ +R ++L+ + G + ++V IR +R E P +I T+ G Sbjct: 166 LRYLMEHPRQVLTRQQILEHVWGCDFTGDSNIIEVYIRYLRLKIEG-PGEKRLIQTVRGV 224 Query: 62 GYRF 65 GY Sbjct: 225 GYVL 228 >UniRef50_O78428 Probable transcriptional regulator ycf27 n=18 Tax=cellular organisms RepID=YCF27_GUITH Length = 254 Score = 95.2 bits (237), Expect = 7e-19, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + G+ SRA++L+++ G E R VDV I R+R E+ P P++I T Sbjct: 178 LELLISRSGQPFSRADILQEVWGYTPERHVDTRVVDVHISRLRAKLETDPSNPDLILTAR 237 Query: 60 GEGYRF 65 G GY F Sbjct: 238 GTGYLF 243 >UniRef50_B2TI09 Two-component response regulator n=3 Tax=Clostridium botulinum RepID=B2TI09_CLOBB Length = 228 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ NP K+ +R ELL ++ G + K RT+DV I+R+R+ FE P+ I T+ + Sbjct: 164 LVFLINNPNKVFTRKELLDEIWGNDYKSDCRTIDVHIKRLREKFE--PNENYKIITLWRK 221 Query: 62 GYRF 65 GY+F Sbjct: 222 GYKF 225 >UniRef50_C9KL69 DNA-binding response regulator ArlR n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL69_9FIRM Length = 230 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + +R ++L+K+ G + VDV IR +R + I T+ G Sbjct: 166 LEYMMRNKRTVLTRDQILEKVWGYDYSGDTNVVDVYIRYLRAKL-DDRFHEKYIYTVRGV 224 Query: 62 GY 63 GY Sbjct: 225 GY 226 >UniRef50_B1YJZ1 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJZ1_EXIS2 Length = 220 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ENPG++ R +L++++ G + R +D I+ +RK I T+ G Sbjct: 157 ILHLLLENPGRVLEREQLIQQLWGFDAFGDTRFLDTHIKNLRKKI-----NVPYIQTVKG 211 Query: 61 EGYRFCG 67 GY+ Sbjct: 212 VGYKLEA 218 >UniRef50_C8WJL3 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJL3_EGGLE Length = 234 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 +PG++ ++A+L + ++ + ++ V I IR E P+ P I T+ G GYR Sbjct: 172 LFSSPGRVYTKAQLYELISASSHGGGEDSIMVHISNIRSKIEDDPNNPAHIVTVRGLGYR 231 Query: 65 FCG 67 F G Sbjct: 232 FEG 234 >UniRef50_D0WLW8 DNA-binding response regulator RegX3 n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WLW8_9ACTO Length = 262 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ + ELL K+ G + T+ V +RR+R+ E PD P I T+ G Sbjct: 166 LAYLVANRGRVVEKRELLNKVWGGAVTGDG-TLAVHVRRLRRRIEPDPDNPVYICTVWGR 224 Query: 62 GYRF 65 GYRF Sbjct: 225 GYRF 228 >UniRef50_Q3KAS5 Two-component system, response regulator n=2 Tax=Proteobacteria RepID=Q3KAS5_PSEPF Length = 235 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + GKI SR ++L +M G +R+VDV I ++R + P P I T+ G+ Sbjct: 165 LWLLASAAGKILSRDDILNRMRGIAFDGLNRSVDVYISKLRNKLKDNPREPVCIKTVWGK 224 Query: 62 GYRFCG 67 GY F Sbjct: 225 GYLFNP 230 >UniRef50_C5ENX8 Two-component response regulator n=2 Tax=Clostridiales RepID=C5ENX8_9FIRM Length = 233 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F N I +R +LL + G + + RTVD IRR+R+ E I T G Sbjct: 170 LRYFLNNQRIILTREQLLNHVWGMDFEGDSRTVDTHIRRLRRKIGE-----EYIKTRIGI 224 Query: 62 GYR 64 GY Sbjct: 225 GYV 227 >UniRef50_B6BN62 Two-component system response regulator n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BN62_9PROT Length = 230 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N G + SR ++L + G DR++DV I R+R P P+ ++ G Sbjct: 162 VLKLFLLNRGIVFSREQILDSVEGMNWSSGDRSIDVIISRLRTKLNDNPRDPKYFESVRG 221 Query: 61 EGYR 64 GYR Sbjct: 222 IGYR 225 >UniRef50_A4CEI9 Transcriptional regulatory protein RstA n=3 Tax=Gammaproteobacteria RepID=A4CEI9_9GAMM Length = 245 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G +R EL++ + G + DRTVD+ + ++RK P P I T+ G+ Sbjct: 177 LWLLAERAGNTVTRDELIQALRGFDYDGFDRTVDLIVSKLRKKLNDNPSKPYRIKTVWGK 236 Query: 62 GYRFCG 67 GY Sbjct: 237 GYLLVK 242 >UniRef50_P45189 Phosphate regulon transcriptional regulatory protein phoB n=18 Tax=Pasteurellaceae RepID=PHOB_HAEIN Length = 231 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P K+ SR +LL ++ +L+ RTVD IRR+R++ I T+ G Sbjct: 161 LHFFMRHPEKVYSREQLLNRIWHNDLEVEYRTVDSYIRRLRRNLAP-FQCEHYIQTVRGS 219 Query: 62 GYRFCGDLED 71 GYRF L D Sbjct: 220 GYRFSSYLRD 229 >UniRef50_D1U371 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U371_9DELT Length = 239 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENP +R EL+ GR+ +DR++DV + ++R + I T+ G Sbjct: 172 LRALMENPDTALTRDELMSLAWGRDFSAYDRSIDVHVSKLRSLLRPYAGHDKRIRTVWGT 231 Query: 62 GYRFCG 67 GY F G Sbjct: 232 GYMFVG 237 >UniRef50_C4Z2E0 Two-component system, OmpR family, phosphate regulon response regulator OmpR n=13 Tax=Bacteria RepID=C4Z2E0_EUBE2 Length = 229 Score = 94.8 bits (236), Expect = 9e-19, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +NP +I SR ++L+ + E + T+ V IRR+R+ E P P I I G Sbjct: 159 LTFFLQNPKQILSRTQILENVFDLEGDFVDENTIAVNIRRLREKIEDNPAAPVYIKNIRG 218 Query: 61 EGYRFCGDLE 70 GY + ++ Sbjct: 219 LGYIWNQEVR 228 >UniRef50_B8I717 Two component transcriptional regulator, winged helix family n=7 Tax=Firmicutes RepID=B8I717_CLOCE Length = 228 Score = 94.8 bits (236), Expect = 9e-19, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G++ +R +L+++ G + + V V +RR+R+ E P P+ I T+ G Sbjct: 158 LTLLTQNSGQVLTRDIILQRLWGTDEAFVDENAVSVNMRRLRQKIEDDPKNPKYIKTVFG 217 Query: 61 EGYRFCGD 68 GY + + Sbjct: 218 IGYTWGEE 225 >UniRef50_Q04VZ3 Response regulator n=6 Tax=Leptospira RepID=Q04VZ3_LEPBJ Length = 234 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NPG +R +LL ++ G+++ DR VDV I+R+R E + TI G Sbjct: 170 ILNLFMTNPGVAFTRDKLLDRVWGKDIYVTDRAVDVNIKRLRDKLGD---EKERLETIRG 226 Query: 61 EGYRFC 66 GYRF Sbjct: 227 IGYRFN 232 >UniRef50_A5G0J5 Two component transcriptional regulator, winged helix family n=36 Tax=Proteobacteria RepID=A5G0J5_ACICJ Length = 262 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + P ++ +R LL + GR+ P DR +DV I R+R+ E +II T+ G Sbjct: 192 LLALLDRPNRVLTRDMLLDLLRGRQAGPFDRAIDVAISRLRRKLEDDGRHAQIIKTVRGG 251 Query: 62 GYRFCGDLE 70 GY +E Sbjct: 252 GYVLAVPVE 260 >UniRef50_B8G869 Two component transcriptional regulator, winged helix family n=3 Tax=Chloroflexus RepID=B8G869_CHLAD Length = 245 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +R LL ++ G V+V I +R+ ++I T++G Sbjct: 175 LEQFMRHPRRVFTRQTLLSRVWGFTYVGDSNIVEVHISNLREKIGD--HERKLIRTVYGV 232 Query: 62 GYRFCGDLE 70 GY D E Sbjct: 233 GYTLRPDDE 241 >UniRef50_C3WCS3 Two-component system response regulator n=4 Tax=Bacteria RepID=C3WCS3_FUSMR Length = 223 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N SR +LL ++ G + DRT+D I+ +RK I TI G Sbjct: 163 LVYLIKNNKIALSREKLLNEVWGYDFLGDDRTIDTHIKNLRKKIGKNA-----IKTIRGI 217 Query: 62 GYRFC 66 GY+ Sbjct: 218 GYKLD 222 >UniRef50_C0C3P9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3P9_9CLOT Length = 241 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG+I +R +LL ++ G + + RTVD I+ +R+ I T+ Sbjct: 177 LYFLMVNPGQIFARDQLLNRIWGYDFEGTTRTVDTHIKTLRQKLGDEGKH---IVTLIRS 233 Query: 62 GYRFC 66 GY+F Sbjct: 234 GYKFE 238 >UniRef50_A6T3B9 Two components system response regulator n=48 Tax=Proteobacteria RepID=A6T3B9_JANMA Length = 246 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ +R +LL GR+ P DR++D+ I R+R+ + P I T+ E Sbjct: 172 LRVFLDHPQRVLTRDQLLNLTQGRDADPFDRSIDLLISRLRQRLQDDAREPRYIKTLRSE 231 Query: 62 GYRFCGDLED 71 GY F + + Sbjct: 232 GYVFSAAVGN 241 >UniRef50_A6CG62 Two-component response regulator n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CG62_9PLAN Length = 244 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F E+ G + +R+++L+ + G + RT+D + R+RK E+ P P I ++ G Sbjct: 173 LKYFIEHEGMVLTRSQILEDVWGEQSAFVTTRTIDNFVLRLRKLVEANPAEPVHIVSVRG 232 Query: 61 EGYRFCGD 68 GYRF + Sbjct: 233 AGYRFMPE 240 >UniRef50_C7I0A5 Two component transcriptional regulator PhoB, winged helix family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0A5_THIIN Length = 244 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR LL K+ G + +RTVDV I+R+R+ E++ T+ G Sbjct: 170 LHYLMAHPERVHSRGALLDKVWGDHVFIEERTVDVHIKRLREALSPV-QCAEMVETVRGA 228 Query: 62 GYRFCGDLE 70 GYRF Sbjct: 229 GYRFTAQAR 237 >UniRef50_C9XRU4 Two-component system response regulator n=12 Tax=Clostridium RepID=C9XRU4_CLODC Length = 278 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N KI + L +++ G D T+ V IR IR+ E P P+I+ T+ G Sbjct: 210 LSYMAQNVNKIIGKERLYEQVWGVYSSICDNTIMVHIRHIREKIEDNPSNPKILITVKGL 269 Query: 62 GYRFCGDLE 70 GY+ ++ Sbjct: 270 GYKLVNRID 278 >UniRef50_B5JD22 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JD22_9BACT Length = 239 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R ++L+ + G + P VDV ++R+RK +I T+ G Sbjct: 174 LEYLMRSPGRVLTRTQILEHVWGYDFDPSTNVVDVCVQRLRKKV-DAGHDVHLIETVRGA 232 Query: 62 GYRFCGD 68 GYR + Sbjct: 233 GYRMRKE 239 >UniRef50_O34903 Uncharacterized transcriptional regulatory protein ykoG n=5 Tax=Bacillales RepID=YKOG_BACSU Length = 228 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ ++P ++ +R ++L + G + VDV IR IRK P ++I TI G Sbjct: 164 LVYMLKHPQQVLTREQILSSVWGFDYIGDTNVVDVYIRYIRKKL-DYPYEKQLIHTIRGV 222 Query: 62 GY 63 GY Sbjct: 223 GY 224 >UniRef50_C9XSY6 Two-component response regulator n=15 Tax=Firmicutes RepID=C9XSY6_CLODC Length = 241 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +N + SR ++L+K+ +D T+ V I+R+R+ P I T+ G Sbjct: 168 LLILIQNKNTVLSRTQILEKLWDVTYDFVNDNTLTVYIKRLREKIGDDLCEPIYIETVRG 227 Query: 61 EGYRFCG 67 GY++ G Sbjct: 228 IGYKWIG 234 >UniRef50_D0LLH3 Two component transcriptional regulator, winged helix family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLH3_HALO1 Length = 226 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP ++ SR ELL+++ ++ RTVD + ++R ES P+ P T+ G Sbjct: 162 LAFLVKNPSRVFSREELLRQVW-KQSSGTLRTVDNFVAQLRSKLESDPENPRFFITVRGS 220 Query: 62 GYRFCG 67 GYRF Sbjct: 221 GYRFDS 226 >UniRef50_A6NWH9 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWH9_9BACE Length = 147 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ S+A+L G E +V+ I R+RK E P P I T+ G Sbjct: 73 LYCMASSPGQVFSKAQLYAAAWGEEYLHGTNSVENIIWRLRKKLEPDPRNPIYIKTVIGM 132 Query: 62 GYRFC 66 GY+ Sbjct: 133 GYKMV 137 >UniRef50_Q398T9 Two component transcriptional regulator, winged helix family n=23 Tax=Proteobacteria RepID=Q398T9_BURS3 Length = 395 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P + SR LL + GR+ DR+VDV I R+R+ E P P I T+ G Sbjct: 326 LHALGSSPNRAVSRENLLARARGRDHAALDRSVDVQILRLRQIVEDDPGKPRFIKTVWGI 385 Query: 62 GYRFCGDLE 70 GY ++ Sbjct: 386 GYMLVAGVD 394 >UniRef50_B2TMR2 Transcriptional regulatory protein ResD n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TMR2_CLOBB Length = 227 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 35/66 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L NP KI SR ELL+ + + DR +D I+ +R+ E +II TI+G Sbjct: 159 ILLLMASNPQKIYSREELLESVIEEYYEKMDRVIDSHIKNLRQKIEVNSRDCKIIKTIYG 218 Query: 61 EGYRFC 66 GYRF Sbjct: 219 VGYRFE 224 >UniRef50_C1ZG07 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZG07_PLALI Length = 264 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +F E+ G++ SR +L + + RT+D + R+RK E P P I ++ G G Sbjct: 186 KYFIEHQGEVLSRTRILNHVWDEHAEVTTRTIDNFVLRLRKLIEPDPSKPVHILSVRGTG 245 Query: 63 YRFCG 67 YRF Sbjct: 246 YRFLP 250 >UniRef50_Q8ESP1 Two-component response regulator n=1 Tax=Oceanobacillus iheyensis RepID=Q8ESP1_OCEIH Length = 227 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ENP + SR ELL K+ G + DR VD I+RIRK + P + T+ G Sbjct: 164 LLLLAENPNRAFSREELLMKIWGNDYFGSDRAVDDLIKRIRKKMGNIP-----LETVWGF 218 Query: 62 GYRFCGDLE 70 GYR D E Sbjct: 219 GYRLRKDEE 227 >UniRef50_Q3A190 Two component signal transduction response regulator n=4 Tax=Bacteria RepID=Q3A190_PELCD Length = 238 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + R LL G + + RT+D I ++RK E P P++I T+HG Sbjct: 168 LEAFYRHPDEALPRNTLLNLAWGIDYQGTTRTLDQHIAQLRKKIEPDPAAPQVIMTVHGI 227 Query: 62 GYRFCG 67 GYR+ Sbjct: 228 GYRYVA 233 >UniRef50_A9G298 Two-component response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G298_SORC5 Length = 241 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L E G++ SR ++ K+ G RT+D I ++R E TP + T+ G Sbjct: 175 VLLCLAEAGGRVLSREQIQAKVWGPTHHGTPRTIDNFILQLRNKLEENATTPRHLLTVRG 234 Query: 61 EGYRFCG 67 GYRF Sbjct: 235 VGYRFVP 241 >UniRef50_C7NK44 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NK44_KYTSD Length = 261 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +PG++ +R ELL+ + RTVDV +RR+R P+ +I T+ Sbjct: 196 LAHLATHPGRVFTREELLEDLWEGTRLSGTRTVDVHVRRLRSKLG--PEHEGLIVTVRNV 253 Query: 62 GYRFCG 67 GYR Sbjct: 254 GYRMEA 259 >UniRef50_B0G7M7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0G7M7_9FIRM Length = 231 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ENP I S+ EL K+ + D T+ V I+++R E P P I T+ G+ Sbjct: 167 LYLFIENPEYIFSKQELFSKVWRSD-NCDDSTILVYIKKLRDKLEDDPSHPTHICTVWGK 225 Query: 62 GYRFC 66 GY+FC Sbjct: 226 GYKFC 230 >UniRef50_UPI000196BAD1 hypothetical protein CATMIT_00504 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD1 Length = 223 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 +NP +I +R +L++K+ G + DRTVDV I+RIR++ P + T+ G GY+ Sbjct: 162 LAKNPNQIFTREQLIEKIWGMDYDGFDRTVDVHIKRIRENLGHLPG--FKVVTVRGLGYK 219 >UniRef50_C0Z621 Two-component response regulator n=5 Tax=Firmicutes RepID=C0Z621_BREBN Length = 239 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G + +R ++ ++ G TV V I+ +R+ E + I T G Sbjct: 175 LTFLAENAGIVFTREQIYDRVWGYGY-GSLNTVTVHIKNLREKLE---TERQFIKTQWGT 230 Query: 62 GYRFCGD 68 GY F G+ Sbjct: 231 GYVFIGE 237 >UniRef50_C6D0P6 Two component transcriptional regulator, winged helix family n=9 Tax=Bacillales RepID=C6D0P6_PAESJ Length = 216 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + +N G+I R LL ++ G + DRTVD IRR+R+ I T G G Sbjct: 153 KYLIQNKGQIVPRKMLLDQVWGFDYYGDDRTVDTHIRRLREKIGE-----TRIKTFRGLG 207 Query: 63 YRFCGDLED 71 Y ++ Sbjct: 208 YSLEEHPDE 216 >UniRef50_B8IM29 Two component transcriptional regulator, winged helix family n=16 Tax=Proteobacteria RepID=B8IM29_METNO Length = 251 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 37/68 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C PG++ SR +LL GR P +R++DV + RIR+ E PE+I TI Sbjct: 181 LHAMCLRPGRVLSRDQLLDLTQGRAPGPFERSIDVLVSRIRQKIERDSRNPEMIKTIRSG 240 Query: 62 GYRFCGDL 69 GY F ++ Sbjct: 241 GYVFTPEV 248 >UniRef50_P51358 Probable transcriptional regulator ycf27 n=96 Tax=cellular organisms RepID=YCF27_PORPU Length = 243 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + G+ SRA +L+++ G E R VDV I R+R E P P++I T Sbjct: 169 LELLVSKAGEPFSRASILQEVWGYTPERHVDTRVVDVHISRLRAKLEDDPSNPDLILTAR 228 Query: 60 GEGYRF 65 G GY F Sbjct: 229 GTGYLF 234 >UniRef50_B8G179 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridiales RepID=B8G179_DESHD Length = 234 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + P ++ SR LL+K+ G + RTVDV I +R + II ++ G Sbjct: 164 LHIFMKRPNQVFSREYLLQKVWGYTVSGDTRTVDVHISNLRSKLK---SVSPIIESVRGV 220 Query: 62 GYRFC 66 GYR Sbjct: 221 GYRLA 225 >UniRef50_A6LZK7 Two component transcriptional regulator, winged helix family n=7 Tax=Firmicutes RepID=A6LZK7_CLOB8 Length = 226 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ S+A L + + E D T++V I IR +S E I TI G Sbjct: 161 ILFLLLSHPQKVFSKANLFESIWNEEYFSEDNTLNVHISNIRNKLKSANANEEYIETIWG 220 Query: 61 EGYRF 65 GY+ Sbjct: 221 MGYKL 225 >UniRef50_A9KP45 Two component transcriptional regulator, winged helix family n=15 Tax=Bacteria RepID=A9KP45_CLOPH Length = 224 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F N G SR ++L + + RT+D ++++R D I TI G Sbjct: 161 LTYFITNRGVALSREKILNNVWNYDYFGDARTIDTHVKKLRSKMGDKGD---YIKTIWGM 217 Query: 62 GYRFC 66 GY+F Sbjct: 218 GYKFE 222 >UniRef50_A0L7S7 Two component transcriptional regulator, winged helix family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7S7_MAGSM Length = 250 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR ++L G++ +P RT+D+ + R+RK P +I T+ Sbjct: 170 LRVFLHHPNRVLSRDQILDLTYGKDQEPFGRTIDMQVSRLRKRLVDNAKDPSLIKTVRNA 229 Query: 62 GYRFCGDL 69 GY FC + Sbjct: 230 GYVFCSRV 237 >UniRef50_A5WHF9 Two component transcriptional regulator, winged helix family n=3 Tax=Psychrobacter RepID=A5WHF9_PSYWF Length = 240 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F + GK+ +R +L + M + DR +DV I R+R E P P+ I T+ G Sbjct: 171 LHYFATHAGKVLNREQLWQAMPNDDSSDNIDRAIDVHISRLRALIEDNPRQPKRIITVRG 230 Query: 61 EGYRFCGD 68 GY+F D Sbjct: 231 VGYQFATD 238 >UniRef50_C8SEM3 Two component transcriptional regulator, winged helix family n=3 Tax=Rhizobiales RepID=C8SEM3_9RHIZ Length = 259 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L FC NPG++ SR ELL P +R+VDV + RIR+ E P ++ T+ Sbjct: 189 LLAFCRNPGRVLSREELLSVTHAGLAGPIERSVDVHVSRIRQKIEKDARDPVLLRTVRLG 248 Query: 62 GYRFCGDLED 71 GY F +E+ Sbjct: 249 GYIFTATVEE 258 >UniRef50_C8PVM6 Putative transcriptional regulator OmpR n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVM6_9GAMM Length = 245 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F + GK+ SR +L M + DR +DV I R+R E P P+ I T+ G Sbjct: 176 LHYFATHSGKVLSREQLWHAMPNDDSSDNIDRAIDVHISRLRALIEDNPRQPKRIITVRG 235 Query: 61 EGYRFCGD 68 GY+F D Sbjct: 236 VGYQFATD 243 >UniRef50_C6NV64 Two component transcriptional regulator, winged helix family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NV64_9GAMM Length = 247 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 36/70 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + P + SR LL+ + G + DR++DV + R+RK E P P + T G Sbjct: 160 LLVFAQRPNRALSRDHLLQALGGDDDGRFDRSIDVRVTRLRKLIEENPRQPRFLRTERGV 219 Query: 62 GYRFCGDLED 71 GYRF + Sbjct: 220 GYRFVPRENE 229 >UniRef50_B3DZZ9 DNA-binding response regulator, OmpR family (REC-wHTH domains) n=6 Tax=Bacteria RepID=B3DZZ9_METI4 Length = 268 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ +R ++ +++ P VDV I+++RK + ++I T+ G Sbjct: 202 ILELLMRTPGRVFTRTQVCERVWNYHFDPGTNLVDVYIQKLRKKI-DEGEEQKLIQTVRG 260 Query: 61 EGYR 64 GY+ Sbjct: 261 VGYK 264 >UniRef50_B2TJU3 Regulatory protein VanR n=9 Tax=Firmicutes RepID=B2TJU3_CLOBB Length = 230 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S E+ +K+ + + TV V + R+R E + +II T+ G Sbjct: 164 ILYLLATNRGRVFSAEEIFEKVWKEKYYQSNNTVMVHMSRLRDKLEKHMEGNKIIHTVWG 223 Query: 61 EGYR 64 GY+ Sbjct: 224 VGYK 227 >UniRef50_C0ZH45 Two-component response regulator n=2 Tax=Bacillales RepID=C0ZH45_BREBN Length = 229 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+P + SR ELL + G + DR VD IRRIRK + P + T+ G Sbjct: 161 VLSLLSEHPNRAFSRDELLSLIWGFDYFGSDRVVDDLIRRIRKKLDKIP-----LETVWG 215 Query: 61 EGYRFCG 67 GYR Sbjct: 216 FGYRLRT 222 >UniRef50_A7BVU1 DNA-binding response regulator PhoB n=1 Tax=Beggiatoa sp. PS RepID=A7BVU1_9GAMM Length = 130 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + ++ SR++LL + G + +RTVDV I R+R T D ++ T+ G Sbjct: 59 LKFFMSHINRVYSRSQLLDFVWGENVFIEERTVDVHILRLR-KILKTYDADNMLQTVRGI 117 Query: 62 GYRFCGDLED 71 GYRF DL + Sbjct: 118 GYRFSTDLTN 127 >UniRef50_Q9KAM3 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9KAM3_BACHD Length = 231 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG+ +R +LL R+++ +DR VD I+ IR E +I T+ G Sbjct: 159 VLHRLLSNPGRTYTREQLLDLAWDRQVEIYDRNVDAHIKNIRDKLEKVGADSTVIQTVWG 218 Query: 61 EGYRFC 66 GY++ Sbjct: 219 VGYKYV 224 >UniRef50_B6FSP5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSP5_9CLOT Length = 226 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F EN G+I +R ++L + ++ T+ V I+R+R+ E P+ P+II T+ Sbjct: 159 ILALFFENKGRILTRGQILSGIWDESGNFVNNNTLTVYIKRLREKIEEDPNAPKIIKTVR 218 Query: 60 GEGYR 64 G GY+ Sbjct: 219 GMGYK 223 >UniRef50_B6IYL9 Two-component response regulator GltR n=1 Tax=Rhodospirillum centenum SW RepID=B6IYL9_RHOCS Length = 262 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E G++ SR +LL G DR+VDV I R+R+ + PD P +I T+ Sbjct: 192 LLALVERAGRVLSRDQLLDVTHGHNTPAFDRSVDVQIARLRRKIQRDPDAPPVIRTVRNA 251 Query: 62 GYRFCGDL 69 GY F + Sbjct: 252 GYLFAARV 259 >UniRef50_Q1GXN5 Two component transcriptional regulator, winged helix family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXN5_METFK Length = 241 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+P + SR L++ + G+E DR++DV I R+R H E+ P II T+ Sbjct: 169 VLRALLEHPNRPLSRDFLVEHVYGKESHAMDRSIDVCISRLRHHIEADTRNPTIIRTVRN 228 Query: 61 EGYRFCGDLE 70 GY ++ Sbjct: 229 AGYMLASQVK 238 >UniRef50_A8SVV6 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SVV6_9FIRM Length = 228 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +N G++ +R +++K+ E + T++V IRR+R+ E PE + T+ Sbjct: 160 ILELLIKNKGRVLTRDMIIQKIWDDNENYVDENTLNVHIRRLRQKIEKDAGNPEYVITVF 219 Query: 60 GEGYRF 65 G GY F Sbjct: 220 GIGYTF 225 >UniRef50_B8HQE6 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B8HQE6_CYAP4 Length = 228 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 F +PG++ SR +LL ++ G + P VDV + +RK + E+I T+ G GYR Sbjct: 166 FFRHPGQVLSREQLLDRVWGYDYDPGSNIVDVYVGYLRKKLGN-----ELIETVRGMGYR 220 Query: 65 FCGDL 69 + Sbjct: 221 LKLPV 225 >UniRef50_B1WXJ7 Two-component response regulator n=2 Tax=Chroococcales RepID=B1WXJ7_CYAA5 Length = 226 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR ++L + G E + ++V IR +R E D +I T+ G Sbjct: 161 LKYLMSHPQEVLSREKILDNVWGEEFQGESNVIEVYIRYLRIKIE-NEDHKRLIHTVRGV 219 Query: 62 GYRF 65 GY Sbjct: 220 GYVL 223 >UniRef50_C6QDD0 Two component transcriptional regulator, winged helix family n=5 Tax=Proteobacteria RepID=C6QDD0_9RHIZ Length = 262 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G++ +R LL+ + P +DV + R+R + D P ++ T+ G Sbjct: 195 LEYLMQHAGQVVTRTMLLEHVWDYHFDPQTNVIDVHVSRLRAKIDKNFDKP-LLHTVRGA 253 Query: 62 GY 63 GY Sbjct: 254 GY 255 >UniRef50_C0BVZ7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BVZ7_9CLOT Length = 225 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F NPGK + + + G + +T+ V I+ +R E P P+ I T+ G Sbjct: 159 LLLFVRNPGKTLRKEYIFGNVWGTDSFSESQTLTVHIKMLRAKIEENPREPKRILTVWGV 218 Query: 62 GYRFC 66 GYR+ Sbjct: 219 GYRYE 223 >UniRef50_Q44929 Response regulator gtcR n=8 Tax=Firmicutes RepID=GTCR_ANEMI Length = 242 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%) Query: 12 IQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLE 70 I ++ +L ++ D T+ V I R+R E P P I T+ G GY+F + Sbjct: 178 IFTKQQLFEQAWSETYWEDDNTIMVQISRLRDKIEDQPRQPVYIKTVRGLGYKFASKDD 236 >UniRef50_B7K5A2 Two component transcriptional regulator, winged helix family n=8 Tax=Cyanobacteria RepID=B7K5A2_CYAP8 Length = 231 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ +R ++L+ + G + + ++V IR +R ES +I T+ G Sbjct: 166 LKYLMSHPKEVLTREKILENVWGYDFQGESNVIEVYIRYLRLKIESEGHK-RLIHTVRGV 224 Query: 62 GYRF 65 GY Sbjct: 225 GYVL 228 >UniRef50_C7IFX1 Two component transcriptional regulator, winged helix family n=5 Tax=Clostridiales RepID=C7IFX1_9CLOT Length = 217 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N SR LL+ + G + + RTVDV I+++RK E + I T++ Sbjct: 154 LEVLVNNRNIALSRERLLELVWGYDFEGDTRTVDVHIQKLRKKLE----WEDRIKTVYKL 209 Query: 62 GYRFC 66 GYR Sbjct: 210 GYRLE 214 >UniRef50_C9Y9A3 Transcriptional regulatory protein ompR n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9A3_9BURK Length = 274 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 38/65 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + P ++ SR +L+++ GR + +R++D+ + R+R+ PD P +I T+ G Sbjct: 198 LNTFLQTPRRLFSRDQLMEQARGRAMDAFERSIDLLVSRLRQKLADDPDEPSMIKTVRGA 257 Query: 62 GYRFC 66 GY F Sbjct: 258 GYMFN 262 >UniRef50_C1YUF6 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YUF6_NOCDA Length = 243 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M + G++ SR EL ++ + L P + T+ V IRR+R + P I T+ G Sbjct: 173 IMDFLLRHSGRVVSREELWTEVWHKPLPPVNNTIAVHIRRLRHKLGDSEAQPRFIHTVRG 232 Query: 61 EGYRFCG 67 GYR Sbjct: 233 IGYRLDT 239 >UniRef50_B9E984 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E984_MACCJ Length = 223 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + K+ +R +L++++ G + +RTVDV ++RIRK D+ I T+ G Sbjct: 158 LYYLVRHYPKVATREQLIEEIWGYDFDGDERTVDVHVKRIRKRL-DAFDSGVEIQTVRGV 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_A4SZ97 Two component transcriptional regulator, winged helix family n=3 Tax=cellular organisms RepID=A4SZ97_POLSQ Length = 237 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SRA LL K+ G E+ +RTVDV I+R+R I T+ G Sbjct: 168 LQFFMANPERVHSRASLLDKVWGSEVYIEERTVDVHIKRLRAALVPFDCD-RYIETVRGS 226 Query: 62 GYR 64 GYR Sbjct: 227 GYR 229 >UniRef50_UPI0001C35F78 two-component response regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35F78 Length = 244 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 +L EN K + ++ + + + TV V IR +RK E P P I + Sbjct: 178 ILLLLAENRKKTYTTQDIYEAVWNEPFLFSSNNTVMVHIRNLRKKLEDDPQNPRCIRNVW 237 Query: 60 GEGYR 64 G+GYR Sbjct: 238 GKGYR 242 >UniRef50_Q0TP36 DNA-binding response regulator n=142 Tax=Bacteria RepID=Q0TP36_CLOP1 Length = 223 Score = 93.2 bits (232), Expect = 3e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ N G SR +L + G + RTVD I+R+R+ IAT+ G Sbjct: 160 LIYLSSNEGIALSRDRILDNVWGYDYFGDIRTVDTNIKRLREKLLD---KANYIATVRGS 216 Query: 62 GYRFC 66 GY+F Sbjct: 217 GYKFE 221 >UniRef50_C7LNV6 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNV6_DESBD Length = 229 Score = 93.2 bits (232), Expect = 3e-18, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +PG+ +R + + G L H R VDV ++R+RK E P P II T+ G Sbjct: 161 LELFVAHPGETLTRDFIQSQNWGDSKLYSHSRAVDVHVQRLRKKIEENPQAPRIILTVAG 220 Query: 61 EGYRFCGD 68 GYRF + Sbjct: 221 VGYRFEPN 228 >UniRef50_Q21BK9 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BK9_RHOPB Length = 242 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 41/68 (60%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+I SR +LL M+ RE +DRTVDV + R+R+ E+ P P+II T +G Sbjct: 174 LAALVRHPGRIMSRNDLLDVMSSREWDSNDRTVDVLVGRLRRKIEADPGKPQIIVTEYGL 233 Query: 62 GYRFCGDL 69 GY F + Sbjct: 234 GYVFAEKV 241 >UniRef50_C8X3Y5 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3Y5_DESRD Length = 236 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 38/65 (58%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+ G++ SR ELL+ + E RTVD I R+RK+FE+ P PE I ++ Sbjct: 168 VLKYLIEHEGRVVSRKELLENVWQVEGTVQTRTVDAFIARLRKYFEADPKHPEFITSVRE 227 Query: 61 EGYRF 65 GY+F Sbjct: 228 VGYQF 232 >UniRef50_A3ERN0 Putative two component transcriptional regulator, winged helix family n=2 Tax=Leptospirillum sp. Group II RepID=A3ERN0_9BACT Length = 231 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +N G++ R LL + G + + DRTVDV IRR+RK D + T+ Sbjct: 165 LLALVKNSGRVLDRQMLLDLVWGADYEGTDRTVDVHIRRLRKKLGDYQDR---VQTVKQI 221 Query: 62 GYRF 65 GY+F Sbjct: 222 GYKF 225 >UniRef50_C9YCY7 Transcriptional regulatory protein ompR n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCY7_9BURK Length = 248 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 39/68 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+ G+ RA L+++ GR+L P DR++DV + R+R+ P +I T+ G Sbjct: 175 LRFFAEHAGETLDRARLMEQTRGRDLGPLDRSLDVQVSRLRQRLHDDGKQPVLIKTVRGS 234 Query: 62 GYRFCGDL 69 GY F D+ Sbjct: 235 GYVFSADV 242 >UniRef50_A0L527 Two component transcriptional regulator, winged helix family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L527_MAGSM Length = 250 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 43/68 (63%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F G+ QSR +LL ++ RE P+DRT+DV + R+R+ E P+++ TIHG Sbjct: 174 LLAFVNRAGRAQSRDQLLDAVSNREWSPNDRTIDVMVNRLRRKLEVDARDPKLLITIHGV 233 Query: 62 GYRFCGDL 69 GY+F ++ Sbjct: 234 GYQFTPEV 241 >UniRef50_A4J2J4 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2J4_DESRM Length = 223 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + HF +P ++ +R +++ ++ G + ++V I +R+ E II T+ G Sbjct: 158 LAHFMHHPNQVLTREQIIDRVWGLDFTGGSNVLEVYINMLRQKIEDYGS--RIIHTVRGV 215 Query: 62 GYRF 65 GY Sbjct: 216 GYVL 219 >UniRef50_Q0ASG1 Two component transcriptional regulator, winged helix family n=15 Tax=Proteobacteria RepID=Q0ASG1_MARMM Length = 229 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 9/69 (13%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF----ESTPDTPEIIAT 57 + + ++PG++ SR +LL + G ++ RTVDV + R+RK E P I T Sbjct: 163 LDYLMQHPGRVFSREQLLDAVWGSDVYVEARTVDVHVGRLRKALNNKEERDP-----IRT 217 Query: 58 IHGEGYRFC 66 + GY F Sbjct: 218 VRSAGYAFD 226 >UniRef50_B5EQN9 Two component transcriptional regulator, winged helix family n=3 Tax=Proteobacteria RepID=B5EQN9_ACIF5 Length = 243 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SR LL ++ GR+ +RTVDV IRR+R+ E +II T+ GE Sbjct: 168 LRLFVTNPERVFSRDMLLDQIWGRQSFVEERTVDVHIRRLRRGLEHHG-YAQIIETVRGE 226 Query: 62 GYR 64 GYR Sbjct: 227 GYR 229 >UniRef50_C1IA20 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IA20_9CLOT Length = 233 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C+N K+ SR +LL + G + RTVDV I R+RK + + I TI G Sbjct: 165 LTFLCKNTNKVHSRNQLLDLIWGYDFLGDTRTVDVHITRLRKKLKDNFN----IETIFGV 220 Query: 62 GYRF 65 GY Sbjct: 221 GYML 224 >UniRef50_B4CW77 Two component transcriptional regulator, winged helix family n=2 Tax=Verrucomicrobia RepID=B4CW77_9BACT Length = 229 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ SR ++ + G + + R++D + +R E P P I+ T+ Sbjct: 162 LTFLVTNAGRALSRDRIMSTVWGYDSRVTPRSIDRFVNALRNKIEPDPAEPRILKTVREF 221 Query: 62 GYRFC 66 GY+F Sbjct: 222 GYKFE 226 >UniRef50_B2TJI4 Regulatory protein VanR n=4 Tax=Clostridiales RepID=B2TJI4_CLOBB Length = 226 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N ++ S+A L + + E D+T+ I +R + + E I T+ G Sbjct: 159 ILELLMKNKNRVFSKANLYEFIWESEYLGDDKTIKTHISNLRSKLKEVNENEEYIETVWG 218 Query: 61 EGYRFCG 67 GYR Sbjct: 219 MGYRLSK 225 >UniRef50_C6CWW2 Two component transcriptional regulator, winged helix family n=2 Tax=Paenibacillus RepID=C6CWW2_PAESJ Length = 239 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ + PG + +R +L+ + G + RTVDV + +RK E I +I G Sbjct: 166 VLLYLVQRPGMVITRDDLMNVVWGFDYIGGQRTVDVHVSSLRKKLEL--GQSVQIESIRG 223 Query: 61 EGYRFC 66 GY+ Sbjct: 224 VGYKLV 229 >UniRef50_B1QW07 Regulatory protein VanR n=6 Tax=Clostridiales RepID=B1QW07_CLOBU Length = 235 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + N KI S + + D + V I+ +RK E P P+ I T Sbjct: 169 ILELLALNRKKIFSMENIYSSIWNDSYIGASDNAIMVHIKNLRKKIEKNPKEPKYIKTSW 228 Query: 60 GEGY 63 G GY Sbjct: 229 GRGY 232 >UniRef50_A7GIT8 DNA-binding response regulator n=11 Tax=Clostridium RepID=A7GIT8_CLOBL Length = 230 Score = 92.5 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ +EL +++ G+E +D ++ IR +R+ T + I T+ G Sbjct: 162 ILCLLARNKGRVFPSSELYERVWGQEFLENDNSLLTHIRNLREKLNDTVKNSKYIKTVWG 221 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 222 VGYKIEKE 229 >UniRef50_A6FSM2 Probable two-component response regulator protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSM2_9RHOB Length = 228 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 39/68 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR E+ + G+ P DRT+D + R+R+ + D P +I ++ G Sbjct: 142 LELFVRHPGRVLSRDEISLALRGQAWSPLDRTIDGHVARLRRKIDPGHDEPLLIRSVRGV 201 Query: 62 GYRFCGDL 69 GY F G++ Sbjct: 202 GYVFTGEV 209 >UniRef50_C3RMH7 Signal transduction regulator n=8 Tax=Bacteria RepID=C3RMH7_9MOLU Length = 229 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N ++ R ELL ++ G + R +DV IR +R + I TI Sbjct: 160 LVYLMDNKHRVVEREELLNEIWGYDFIGESRALDVHIRALRSKLNDDGH--KYIKTIRSV 217 Query: 62 GYRFCGDLE 70 GYRF + + Sbjct: 218 GYRFYEEGD 226 >UniRef50_B3DXI2 Phosphate regulon transcriptional regulatory protein phoB n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXI2_METI4 Length = 258 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G +QSR +LLK++ G + RT+D IRR+R + + T+ G Sbjct: 194 LSTLVEREGAVQSREQLLKEVWGYDKTVDTRTIDTHIRRLRDKLG---RASQYLRTVRGI 250 Query: 62 GYRF 65 GYRF Sbjct: 251 GYRF 254 >UniRef50_P23620 Phosphate regulon transcriptional regulatory protein phoB n=218 Tax=Proteobacteria RepID=PHOB_PSEAE Length = 229 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + + +R +LL ++ G + +RTVDV IRR+RK + ++ T+ G Sbjct: 164 LQFFMTHQERAYTRGQLLDQVWGGNVYVEERTVDVHIRRLRKALGEVYEN--LVQTVRGT 221 Query: 62 GYRFCG 67 GYRF Sbjct: 222 GYRFST 227 >UniRef50_B8H4H9 Two-component response regulator protein n=9 Tax=Proteobacteria RepID=B8H4H9_CAUCN Length = 242 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR +L + G + P VDV +RR+R + P I T+ G Sbjct: 169 LELFLSSPGRVLSRERILSNVWGVDEDPLTNVVDVYVRRLRAKIDP-PLASSFITTVRGL 227 Query: 62 GYRFCGD 68 GYR D Sbjct: 228 GYRLEPD 234 >UniRef50_B1IEF4 Regulatory protein VanR n=17 Tax=Firmicutes RepID=B1IEF4_CLOBK Length = 233 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF-ESTPDTPEIIATIH 59 + NP K+ S+A + + + G E D TV+V + R+R ++ + + I T+ Sbjct: 166 VLELLLNNPNKVYSKANIFESIWGEEFLGDDNTVNVHVSRLRSKLSKANNNGEDYIETVW 225 Query: 60 GEGYRF 65 GYR Sbjct: 226 AMGYRL 231 >UniRef50_B7CCX3 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCX3_9FIRM Length = 228 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G+ SR EL+ ++ G + RT+DV I +RK + I ++ Sbjct: 160 LKYLAKNEGRAVSREELINQIWGYDFIGESRTLDVHINSLRKKLGNEYAH--WIQSVRQV 217 Query: 62 GYRFCGDLED 71 GYR D Sbjct: 218 GYRLVSGDND 227 >UniRef50_Q3A7S2 Putative two component response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7S2_PELCD Length = 242 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G + SR ++ + RE DR+VD+ I R+RK P P ++ TI G+ Sbjct: 177 LWYLASHAGIVVSRNDIHLALYNREYNGIDRSVDMYISRLRKKLGDCPAHPTLLKTIRGD 236 Query: 62 GYRFCG 67 GY F G Sbjct: 237 GYLFVG 242 >UniRef50_B1ZTF2 Two component transcriptional regulator, winged helix family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTF2_OPITP Length = 248 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + G SR L + G P RT+D + R+RK T + P I + G Sbjct: 173 ILDLLARYAGTPVSRERLFDLVWGYTYLPETRTLDTHVWRLRKKIGDTGEEPRWIKNVPG 232 Query: 61 EGYRFC 66 GY+ Sbjct: 233 VGYQLD 238 >UniRef50_A9BP99 Two component transcriptional regulator, winged helix family n=60 Tax=Proteobacteria RepID=A9BP99_DELAS Length = 262 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ +I +R LL+ + P +DV I R+R P +I T+ G Sbjct: 189 LAFLMQHAHQIVTRTMLLESVWDYRFDPQTNVIDVHISRLRGKV-DKGFEPALIHTVRGV 247 Query: 62 GYRFCGDLED 71 GY +D Sbjct: 248 GYSLSDRPQD 257 >UniRef50_C9RLA0 Two component transcriptional regulator, winged helix family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLA0_FIBSS Length = 238 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATI 58 + +F + G++ R +LL+ + G E P RT+D I +R+ E P+II +I Sbjct: 170 ILKYFWQRRGEVVLREDLLQDLWGYTPENMPSTRTIDNHIVNLRRKLEDDQANPKIILSI 229 Query: 59 HGEGYRFCG 67 G GY+F Sbjct: 230 RGAGYKFDA 238 >UniRef50_B4WSE4 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WSE4_9SYNE Length = 243 Score = 92.1 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKP--HDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 PG I SR ++L+ + G + +TVDV I R+R T P+ I TI G Sbjct: 176 LLASRPGHIFSRGDILEALWGYDANSAADTKTVDVHISRLRIKLNETTHNPKYIVTIRGR 235 Query: 62 GYRF 65 GY F Sbjct: 236 GYMF 239 >UniRef50_B6BWN6 Two component transcriptional regulator, winged helix family n=1 Tax=beta proteobacterium KB13 RepID=B6BWN6_9PROT Length = 237 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 37/65 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F EN + SR ++++ G+EL DR++DV I RIRK E P+ P+ + T G Sbjct: 168 LKVFIENANQPLSRDQIMQLAKGKELDVFDRSIDVQISRIRKLIEEDPNKPKYLKTKWGF 227 Query: 62 GYRFC 66 GY F Sbjct: 228 GYVFE 232 >UniRef50_B7JF46 DNA-binding response regulator n=87 Tax=Bacteria RepID=B7JF46_BACC0 Length = 225 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+ SR EL++ + G + + +RTVDV ++R+R F D + I T+ G Sbjct: 160 LSQLASYPGRTFSREELIELVWGMDFEGDERTVDVHVKRLRDRFSKRTDDFQ-ITTVRGL 218 Query: 62 GYRFC 66 GY+ Sbjct: 219 GYKLE 223 >UniRef50_UPI0001C37B2E two component transcriptional regulator n=2 Tax=Clostridiales RepID=UPI0001C37B2E Length = 243 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ EN G++ ++ E L + + + T+ V IR IR+ E P+ P+II T+ G Sbjct: 176 LLYLLENRGRVVTKEEFLSNVW-EDSFIGEGTLPVHIRHIREKIEINPNEPQIIRTVWGV 234 Query: 62 GY 63 GY Sbjct: 235 GY 236 >UniRef50_B8G7R1 Two component transcriptional regulator, winged helix family n=3 Tax=Chloroflexus RepID=B8G7R1_CHLAD Length = 234 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ N ++ SR +L++K+ G + DR VDV + ++R+ E+ +I T G Sbjct: 161 LIALARNHNRVLSREDLIEKVWGADFYGTDRVVDVYVSQVRRKIEALTGE-NLIRTARGV 219 Query: 62 GYRFC 66 GYRF Sbjct: 220 GYRFV 224 >UniRef50_C7N1J8 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=4 Tax=Coriobacteriaceae RepID=C7N1J8_SLAHD Length = 231 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + GK+ SR +LL++ G E +TVD I+R+R + P II T+ G Sbjct: 166 LSALMKVAGKVASREDLLREAWGWEYITETKTVDTHIKRLRDKLAAAGFDPGIIETVRGY 225 Query: 62 GYRFCG 67 GYRF Sbjct: 226 GYRFRA 231 >UniRef50_A9KGK4 Phosphate regulon transcriptional regulatory protein n=6 Tax=Coxiella burnetii RepID=A9KGK4_COXBN Length = 248 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P K SR +L+ + G + DRTVDV +RR+R + D +I TI G Sbjct: 178 LHFFMKHPNKTYSRDQLITYIWGGNIYIDDRTVDVQVRRLRDKLKKY-DHHHLIKTIRGA 236 Query: 62 GYRFCGD 68 GY+ D Sbjct: 237 GYQLSTD 243 >UniRef50_C6BIK6 Two component transcriptional regulator, winged helix family n=9 Tax=cellular organisms RepID=C6BIK6_RALP1 Length = 280 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL ++ G + +RTVDV +R++R TP +I T+ G Sbjct: 168 LHFLVAHPQRVHSRTQLLDRVWGNHVFVGERTVDVHVRKLRVALAGTPCD-GLIQTVRGG 226 Query: 62 GYRFCG 67 GYR Sbjct: 227 GYRLVA 232 >UniRef50_C7NFF7 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=11 Tax=Actinomycetales RepID=C7NFF7_KYTSD Length = 244 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ SR +L+++ + +T+D+ + +RK P IAT+ G Sbjct: 177 LHILVRDMGRVVSREQLMREAWQTDWVGSTKTLDMHVSGLRKKLGDDHSDPRFIATVRGV 236 Query: 62 GYRFCG 67 G+R Sbjct: 237 GFRLVT 242 >UniRef50_Q04942 Transcriptional regulatory protein afsQ1 n=34 Tax=Actinomycetales RepID=AFSQ1_STRCO Length = 225 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 31/60 (51%) Query: 9 PGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGD 68 PG+ SR +LL+ + + R VD ++R+R E P +P +I T+ G GYR Sbjct: 165 PGQALSRQQLLRLVWEHDYLGDSRLVDACVQRLRAKVEDVPSSPTLIRTVRGVGYRLDPP 224 >UniRef50_B1VZK5 Putative transcriptional regulator n=8 Tax=Streptomyces RepID=B1VZK5_STRGG Length = 220 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +P ++ +R +L+ + G RTVDV + R+R+ + I T+ Sbjct: 157 LSHLVAHPHRVHTRDQLVTTVWGYGHVGDGRTVDVHVARLRRKLGAEYR--RSIQTVRRV 214 Query: 62 GYRFCG 67 GY++ Sbjct: 215 GYKYTP 220 >UniRef50_C6D3C2 Two component transcriptional regulator, winged helix family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6D3C2_PAESJ Length = 225 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG++ SR EL++ + + + DRTVDV I+R+R+ F + I T+ G Sbjct: 158 LAQLAQYPGRLFSREELIRLVWAADFEGDDRTVDVHIKRLRQRF-ADYAEDFTIQTVRGI 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_D1X187 Two component transcriptional regulator, winged helix family n=4 Tax=Streptomyces RepID=D1X187_9ACTO Length = 236 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P ++ SR LL+++ G + RTVDV + +RK E P PE + T+ G Sbjct: 161 ILAALAAGPDRVFSRQRLLEELHGFDRYISARTVDVHVMNLRKKIERAPRRPERLLTVFG 220 Query: 61 EGYRFC 66 GY+ Sbjct: 221 VGYKLT 226 >UniRef50_A6M0T3 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridium RepID=A6M0T3_CLOB8 Length = 228 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ N + SR ++L K+ G RT+D I+ +R D I TI G Sbjct: 160 LLYLVGNINTVLSREQILDKVWGYNFDGDIRTIDTHIKTLRAKLSEQGD---WIKTIRGS 216 Query: 62 GYRFCGD 68 GY F + Sbjct: 217 GYMFEVE 223 >UniRef50_B1Y714 Two component transcriptional regulator, winged helix family n=2 Tax=Betaproteobacteria RepID=B1Y714_LEPCP Length = 265 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P +I R++LL ++ G + +R VD+ +RR+R+ E +I TI G Sbjct: 164 LHFFMTHPDRILGRSQLLDQVWGDHVCVEERAVDIHVRRLRRALEP-SGHAALIETIRGM 222 Query: 62 GYRFCGD 68 GYRF + Sbjct: 223 GYRFRRE 229 >UniRef50_A6W3G3 Two component transcriptional regulator, winged helix family n=9 Tax=Gammaproteobacteria RepID=A6W3G3_MARMS Length = 244 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F +PG + +R + + GR+ P DR +DV + R+R+ P++I TI G+ Sbjct: 170 LMLFLTHPGAVLTRELIAENTRGRDSAPLDRFIDVHVSRLRQRLREDARQPQLIKTIRGQ 229 Query: 62 GYRFCGDLE 70 GY +E Sbjct: 230 GYILTASVE 238 >UniRef50_Q2W3Z2 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=9 Tax=Proteobacteria RepID=Q2W3Z2_MAGSA Length = 278 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ SR +L ++ DR +DV I RIRK E+ P +P +I T++G Sbjct: 208 LTALLRAPKRVLSREQLQGAEPEKDDIAFDRAIDVRISRIRKKIEADPKSPRLIKTVYGA 267 Query: 62 GYRFCGDLE 70 GY F D+ Sbjct: 268 GYLFSADVR 276 >UniRef50_C3M7Y9 Transcriptional regulator n=27 Tax=Vibrionaceae RepID=C3M7Y9_VIBC3 Length = 223 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHG 60 +L +NPG++ R ELL + G + P RTVD I +R+ P++ I T+ G Sbjct: 160 LLMLLQNPGRVYHRDELLNLIWGYQYFPTTRTVDNHILHLRQKL------PQLDIETLRG 213 Query: 61 EGYRFCG 67 GYR G Sbjct: 214 VGYRLKG 220 >UniRef50_C9RRV7 Two component transcriptional regulator, winged helix family n=16 Tax=Bacteria RepID=C9RRV7_FIBSS Length = 225 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG + SR ++L+K+ G + RTVD+ ++ +R+ + I+ T+ Sbjct: 164 LKLLMSRPGTVFSRQQILEKIWGVDFDMDTRTVDMHVKTLRQKLGAHGS---IVQTVRNV 220 Query: 62 GYR 64 GY+ Sbjct: 221 GYK 223 >UniRef50_C0ZDC3 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDC3_BREBN Length = 231 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N + SR ++L + G + + VDV IR +R ES P ++I T+ G Sbjct: 167 LYYMVQNKEQAVSREQILTAVWGFDFMGNTNIVDVYIRYLRNKIESDPSV-KLIHTVRGI 225 Query: 62 GY 63 GY Sbjct: 226 GY 227 >UniRef50_Q5KTV1 Putative uncharacterized protein n=1 Tax=Staphylococcus aureus RepID=Q5KTV1_STAAU Length = 232 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ENP KI S+A L + + + + TV+V + +R T I TI G Sbjct: 166 ILQLLMENPQKIYSKANLFETVWEDKFHGDENTVNVHMSNLRNKLAQNNATDTYIETIWG 225 Query: 61 EGYRF 65 GYR Sbjct: 226 IGYRL 230 >UniRef50_C7QI13 Two component transcriptional regulator, winged helix family n=13 Tax=Actinomycetales RepID=C7QI13_CATAD Length = 241 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 35/59 (59%) Query: 9 PGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 PG++ +RA+LL+ G + +R VDV + +RK E+ P P + T++G GY+ G Sbjct: 181 PGRVFTRAQLLRHTRGFDRASTERAVDVHVLNLRKKIEANPARPTRLLTVYGVGYKLVG 239 >UniRef50_B0G2J4 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G2J4_9FIRM Length = 257 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N + S L + + + TV V IR +R E P PE+I T+ G Sbjct: 192 LELLVANRHQTFSAQRLFESVWQEPYYYGANNTVTVHIRNLRSKVEDHPGNPELIKTVWG 251 Query: 61 EGYR 64 +GYR Sbjct: 252 KGYR 255 >UniRef50_Q8RBP2 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain n=3 Tax=Clostridia RepID=Q8RBP2_THETN Length = 224 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 N GK+ SR + L ++ G + RTVD I+++R+ +I T+ G GY+ G Sbjct: 167 NKGKVVSREKCLNEVWGYDFYGDLRTVDTHIKQLREKLGE---KRNLIKTVWGIGYKLEG 223 Query: 68 D 68 D Sbjct: 224 D 224 >UniRef50_P0A9Q3 Aerobic respiration control protein arcA n=222 Tax=Gammaproteobacteria RepID=ARCA_ECO57 Length = 238 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG Sbjct: 170 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 229 Query: 63 YRFCGDLED 71 YRFCGDLED Sbjct: 230 YRFCGDLED 238 >UniRef50_C6HUL5 Two component transcriptional regulator, winged helix family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUL5_9BACT Length = 232 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ G++ R LL + G + + DRTVDV IRR+RK + + T+ Sbjct: 164 LVALMRVAGRVLDRETLLNTVWGDDYEGTDRTVDVHIRRLRKKMGESAA---WVETVKQI 220 Query: 62 GYRFCGD 68 GYRF + Sbjct: 221 GYRFREE 227 >UniRef50_D2LRZ1 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LRZ1_BACS4 Length = 230 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 33/60 (55%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 N GK+ SR LL+ G E + +RTVD ++ IR+ ++ T II T+ G GY+ Sbjct: 166 LASNRGKVYSRDHLLELEWGMEYEGDNRTVDTHVKNIREKLKAVGYTDAIIETVWGIGYK 225 >UniRef50_P52108 Transcriptional regulatory protein rstA n=163 Tax=Proteobacteria RepID=RSTA_ECOLI Length = 239 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+I R LLK + G DR+VDV I R+RK P I T+ + Sbjct: 170 LWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNK 229 Query: 62 GYRFCG 67 GY F Sbjct: 230 GYLFAP 235 >UniRef50_C7N192 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Bacteria RepID=C7N192_SLAHD Length = 229 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M F ++PG++ ++ ++ + + + +V V + R+R I TI G Sbjct: 165 IMAMFMQHPGRVFTKQQIYECGWDEDYVAAENSVMVCMSRLRSKLGDDGQEA--IKTIRG 222 Query: 61 EGYRFCG 67 GYR Sbjct: 223 LGYRLEK 229 >UniRef50_C6PQ36 Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQ36_9CLOT Length = 233 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + SR ++L + + RTVD I+RIRK + +I T++G Sbjct: 163 LYLLLSNSGTVYSREQILNIIWNMDYAGGTRTVDTHIQRIRKKLGNNYQD--LIQTVYGI 220 Query: 62 GYR 64 GY+ Sbjct: 221 GYK 223 >UniRef50_A8ZSJ7 Two component transcriptional regulator, winged helix family n=9 Tax=Bacteria RepID=A8ZSJ7_DESOH Length = 233 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG + +R +++ K+ G DR+VDV I +RK E E I T+ G Sbjct: 167 ILSFLASRPGLVFTRWQIVDKIRGEHYAVTDRSVDVLISGLRKKLEDYG---EYIETVRG 223 Query: 61 EGYRFCGDLED 71 GYRF ++E+ Sbjct: 224 VGYRFR-EIEE 233 >UniRef50_UPI0001787D57 two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787D57 Length = 228 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P + + +LL K + T+ V + R+R+ E+ P+ P+ + + G Sbjct: 164 LRVFAEHPRHVFTYDQLLAKFW--DGVGDRHTIRVHLSRLREKIEADPNQPQFLVNVWGV 221 Query: 62 GYRFCG 67 GYRF G Sbjct: 222 GYRFEG 227 >UniRef50_C0Z911 Two-component response regulator n=4 Tax=Firmicutes RepID=C0Z911_BREBN Length = 255 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 36/64 (56%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L + + +R +L++++ G + + DR VD+ I+RIR+ E+ P + I T G G Sbjct: 189 LFLAQYKNQTFTREQLIEQVWGMDYEGSDRAVDLAIKRIRRSLENWPTSEGEIRTYRGLG 248 Query: 63 YRFC 66 Y+ C Sbjct: 249 YKLC 252 >UniRef50_C6RFL7 Two component transcriptional regulator, winged helix family n=1 Tax=Campylobacter showae RM3277 RepID=C6RFL7_9PROT Length = 224 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGKI +R E+++++ G + +R VD ++++R+ E D IAT+ G Sbjct: 159 LFLLLSNPGKIFTRLEIMQEIWGYDTDSDERAVDTHVKKLRRKLEGCTDFE--IATVRGI 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_B8FI17 Two component transcriptional regulator, winged helix family n=6 Tax=Proteobacteria RepID=B8FI17_DESAA Length = 229 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P ++ SR ELL G + + +DRT+D IR +RK + E I +I+G Sbjct: 162 ILKVMMSRPNRVFSRNELLDLAIGSQFEGYDRTIDSHIRNLRKKIKKALPDLECIHSIYG 221 Query: 61 EGYRFC 66 GY+F Sbjct: 222 AGYKFN 227 >UniRef50_B1C9W9 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9W9_9FIRM Length = 150 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P ++ + +++ + + + R V+ + +R+ +TPD+P+ I ++ Sbjct: 79 ILALLITHPKRVFTYELIMQLVWNEDYSYYSRKAVNNHVSNLRRKLRTTPDSPDYIKSVI 138 Query: 60 GEGYRFC 66 G GY+F Sbjct: 139 GVGYKFE 145 >UniRef50_Q0IC97 DNA-binding response regulator n=3 Tax=Synechococcus RepID=Q0IC97_SYNS3 Length = 240 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + SR +L++ + G + + VDV +R +RK E+ +I T+ G Sbjct: 173 LDCFMRHPRQALSRGQLIQHVWGDDYFGDENVVDVFVRYLRKKLEAGGSE-RVIQTVRGV 231 Query: 62 G 62 G Sbjct: 232 G 232 >UniRef50_Q52990 Phosphate regulon transcriptional regulatory protein phoB n=193 Tax=cellular organisms RepID=PHOB_RHIME Length = 227 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR++LL + G ++ +RTVDV + R+RK + + P++I T+ G Sbjct: 163 LEFLMSSPGRVFSRSQLLDGVWGHDIYVDERTVDVHVGRLRKAL-NFSNMPDVIRTVRGA 221 Query: 62 GYRFCG 67 GY Sbjct: 222 GYSLES 227 >UniRef50_Q01N64 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q01N64_SOLUE Length = 245 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ GK SR +L+++ G R +D I R+R++ E P P + T+ G Sbjct: 174 LRYLIQHEGKPVSRKAMLEEVWGLHEDTDTRAIDNFIVRLRRYVEEEPTKPRHLLTVRGV 233 Query: 62 GYRFCG 67 GYRF Sbjct: 234 GYRFVA 239 >UniRef50_C7LZ74 Two component transcriptional regulator, winged helix family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ74_ACIFD Length = 225 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F +P +R ELL + G E DRTVDV + ++RK I+T+ G Sbjct: 161 LGYFFAHPATALTRRELLDGVWGPEWYGDDRTVDVHVLQLRKKLG----GAIAISTVWGV 216 Query: 62 GYRFCGD 68 GYRF + Sbjct: 217 GYRFDPE 223 >UniRef50_Q2T1W7 DNA-binding response regulator n=22 Tax=Proteobacteria RepID=Q2T1W7_BURTA Length = 272 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G+ +R L + + G P +DV + R+RK + TP +I T+ G Sbjct: 208 VLEFMMRHAGQTITRMMLFEAVWGYHFDPGTNLIDVHMGRLRKKIDPPDATP-MIRTVRG 266 Query: 61 EGYRFC 66 GY Sbjct: 267 AGYILS 272 >UniRef50_C4L1Q9 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L1Q9_EXISA Length = 224 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ +R +LL ++ G E + RTVDV I R+R + P I+T+ G Sbjct: 159 LYFLATHLNQVFTRQQLLDRIWGYETESETRTVDVHINRLRARLK--PIDAFQISTVWGL 216 Query: 62 GYRFC 66 GYR Sbjct: 217 GYRLE 221 >UniRef50_Q3KB13 Two component Transcriptional regulator, Winged helix family n=33 Tax=Proteobacteria RepID=Q3KB13_PSEPF Length = 245 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ SR +LL GR+ DR++D+ + R+R+ P I T+ E Sbjct: 172 LRVFLDHPQRVLSRDQLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDSREPTYIKTVRNE 231 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 232 GYVFSFAVE 240 >UniRef50_D1C5Q5 Two component transcriptional regulator, winged helix family n=52 Tax=Bacteria RepID=D1C5Q5_SPHTD Length = 244 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +P ++ +R +++++ G + ++V + +R+H E+ P ++ T+ G Sbjct: 169 LLLFMRHPNQVLTRDVIMERVWGYDFPGESNVLEVYVSNLRRHLEA-GGEPRLLQTVRGA 227 Query: 62 GYRFCGDLED 71 GY E+ Sbjct: 228 GYALRLPTEE 237 >UniRef50_A4X6U8 Transcriptional regulator domain protein n=4 Tax=Micromonosporaceae RepID=A4X6U8_SALTO Length = 203 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LH +P ++ +R +LL + G E RTVDV +RR+R ++ T++G Sbjct: 132 LLHLVAHPRRVFTRLQLLNAVWGYEHAGV-RTVDVHVRRLRGKVGVDVP---LVTTVYGV 187 Query: 62 GYRFCGDLE 70 GYR D Sbjct: 188 GYRLADDAR 196 >UniRef50_C1I9Y7 Two component transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Y7_9CLOT Length = 241 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +N ++ +R +L+ + G + RTVD ++++R+ E + + T+ Sbjct: 178 LMFLIKNKNRVFTREDLITSVWGYDFYGDTRTVDTHVKKLREKLEFFREN---LKTVWRV 234 Query: 62 GYRFCGD 68 GY + Sbjct: 235 GYSLTIE 241 >UniRef50_C6D0Z2 Two component transcriptional regulator, winged helix family n=4 Tax=Bacillales RepID=C6D0Z2_PAESJ Length = 231 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L G+I +RAELL+ + G + RTVD I+R+RK D ++I T+ G Sbjct: 167 LLALLGVRGRIFTRAELLESVWGYDFPGDMRTVDTHIQRLRKKL----DAADLITTVFGI 222 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 223 GYKFEKRTE 231 >UniRef50_D1XII5 Two component transcriptional regulator, winged helix family n=1 Tax=Streptomyces sp. ACTE RepID=D1XII5_9ACTO Length = 253 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG + R +++ ++ G RT+DV + +R PE I T+ G Sbjct: 186 LAALVANPGVVLERRDIISRVWGENWFGSTRTIDVHVGSLRGKLG----CPEWIQTVRGV 241 Query: 62 GYRFCGD 68 GY+ Sbjct: 242 GYKLTAP 248 >UniRef50_Q1GKH2 Two component transcriptional regulator, winged helix family n=28 Tax=Rhodobacterales RepID=Q1GKH2_SILST Length = 239 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F E+P ++ SRA++++++ G DR +DV I R+R P P +I TI+G Sbjct: 168 VLRLFLESPKRLISRAQMMERLGGGAGDSFDRAMDVRISRLRTKLREDPKNPRLIKTIYG 227 Query: 61 EGYRFCGDL 69 GY F GD+ Sbjct: 228 AGYIFLGDV 236 >UniRef50_C8P1C0 Regulatory protein VanR n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1C0_ERYRH Length = 231 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + N GKI S + + + E TV V IR +RK E+ P+ P+II I Sbjct: 165 ILKLLATNRGKIFSIQSIYENVWQDEYLYSSANTVMVHIRNLRKKIENCPENPKIIKNIW 224 Query: 60 GEGYR 64 G GY+ Sbjct: 225 GRGYK 229 >UniRef50_B2TIW8 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=7 Tax=Clostridium RepID=B2TIW8_CLOBB Length = 231 Score = 90.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +NP K+ +R ELL K+ G + R VD+ I+RIR+ ++I TI+G Sbjct: 168 IILLMVQNPFKVFTREELLDKIWGYSFVGNTRAVDIHIKRIRQKL---VGNEDVIKTIYG 224 Query: 61 EGYRFC 66 GYR Sbjct: 225 VGYRLE 230 >UniRef50_C8VYB2 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYB2_DESAS Length = 236 Score = 90.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK SR LLK+ ++ RTVDV IRRIR+ E + I T G Sbjct: 168 LYFLACQPGKYFSRYFLLKQFWEFDVSNDSRTVDVHIRRIRQKLEILNANQQYIETARGV 227 Query: 62 GYRFC 66 GYRF Sbjct: 228 GYRFI 232 >UniRef50_C9LLD5 DNA-binding response regulator ResD n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLD5_9FIRM Length = 234 Score = 90.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFES-TPDTPEIIATIHG 60 + +P ++ S+ +L +++ + TV V I R+R + + E I T+ G Sbjct: 167 LYFLATHPNEVFSKEQLFEQIWSLDPIGEPATVTVHINRLRSKLKKVSGRAYERIETVWG 226 Query: 61 EGYRFCGD 68 GYRF G+ Sbjct: 227 SGYRFHGN 234 >UniRef50_C8WK97 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=C8WK97_EGGLE Length = 237 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ SR L + + V+V + IRK + + I T+ G Sbjct: 172 ILHVLMRSPDKVFSRELLYELVWKNGYYGEQNAVNVHVSNIRKKLAAAGGAGDYIKTVWG 231 Query: 61 EGYRFC 66 G++ Sbjct: 232 IGFKLA 237 >UniRef50_C6X1B3 Phosphate regulon transcriptional regulatory protein phoB n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X1B3_FLAB3 Length = 227 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K+ R E+L+K+ G ++ +RT+DV IRR+R+ I T+ G Sbjct: 167 LYLLASNTNKVFKREEILEKVWGNDVIVGERTIDVHIRRLREKLGIGT-----IQTLKGI 221 Query: 62 GYRFC 66 GY+ Sbjct: 222 GYKLV 226 >UniRef50_B2HJN8 Transcriptional regulatory protein n=15 Tax=Mycobacterium RepID=B2HJN8_MYCMM Length = 266 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 + G+ +R L+ ++ G + RTVDV +RR+R + ++ T+ G GY Sbjct: 171 FLVRHAGQAFTRTRLMHEVWGYDCNGRARTVDVHVRRLRAKLGAD--HESMVDTVRGVGY 228 Query: 64 R 64 Sbjct: 229 M 229 >UniRef50_A6DFF3 DNA-binding response regulator n=2 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DFF3_9BACT Length = 230 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C++PG++ SR +L+K+ G ++ +RTVDV I IR+ I T+ G Sbjct: 167 LFFLCKHPGRVYSREAILEKIRGEDVIITERTVDVHILSIRRKVGDFAPN---IITVRGI 223 Query: 62 GYRFCGD 68 GY+ + Sbjct: 224 GYKVAEE 230 >UniRef50_Q0K0A7 Response regulator, OmpR-family n=9 Tax=Bacteria RepID=Q0K0A7_RALEH Length = 247 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ +R +LL GRE + +R++D+ + R+R+H P I T+ E Sbjct: 173 LRVFVDHPQRVLNRDQLLSLTQGREAEMFERSIDLLVSRLRQHLRDDAREPRYIKTVRSE 232 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 233 GYVFSTPVE 241 >UniRef50_Q82EB1 Transcriptional regulatory protein cseB n=29 Tax=Actinobacteria (class) RepID=CSEB_STRAW Length = 235 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F PG + SR +LL+++ R VDV ++R+R I T+ G Sbjct: 175 LLEFSSAPGTVLSRDKLLERVWDYGWGGDTRVVDVHVQRLRTKIGQD-----RIDTVRGF 229 Query: 62 GYRFCG 67 GY+ Sbjct: 230 GYKLKA 235 >UniRef50_B8HDW6 Two component transcriptional regulator, winged helix family n=21 Tax=Bacteria RepID=B8HDW6_ARTCA Length = 232 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F EN GK+ SR +LL ++ G + VDV + +R PE ++ G G Sbjct: 161 RVFVENSGKLLSREQLLSRVWGYDFDGSSNVVDVYVGYLRTKLG-----PEHFQSVRGAG 215 Query: 63 YRFCG 67 YRF Sbjct: 216 YRFTP 220 >UniRef50_B8FLX7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B8FLX7_DESAA Length = 235 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 39/67 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PGK+ SR EL+ K+ GR + +DR +D I+ +RK + E I +++G Sbjct: 168 LHAFMAHPGKVFSRDELIAKIQGRTYEGYDRNIDWHIKNLRKKLIAAQPGLEPIESVYGV 227 Query: 62 GYRFCGD 68 GY+F + Sbjct: 228 GYKFILE 234 >UniRef50_A3NL94 DNA-binding response regulator n=27 Tax=pseudomallei group RepID=A3NL94_BURP6 Length = 245 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +RA+LL+ + DR VDV I R+RK E P PE+I T G Sbjct: 173 LAFFLGSPSRVVTRAQLLECTRAFD-DVFDRAVDVQIWRLRKKIEKDPKHPELIRTERGV 231 Query: 62 GYRFCG-DLE 70 GY F ++E Sbjct: 232 GYYFDAKEVE 241 >UniRef50_C6LEL9 DNA-binding response regulator RegX3 n=3 Tax=Clostridiales RepID=C6LEL9_9FIRM Length = 234 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F EN ++ + ++L ++ + T+ V IRR+R E P I T+HG Sbjct: 159 LKYFLENKNQVLLKEQILARVWDSGGSFVEENTLMVNIRRLRTKVEEDASHPRYIKTVHG 218 Query: 61 EGYRFC 66 GY + Sbjct: 219 MGYLWE 224 >UniRef50_A5F0A5 Transcriptional regulator n=77 Tax=Proteobacteria RepID=A5F0A5_VIBC3 Length = 245 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 7/64 (10%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHG 60 +L N G++ +R ELL + G P RTVD + ++R+ P + I T+ G Sbjct: 185 LLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKL------PGLEIETLRG 238 Query: 61 EGYR 64 GY+ Sbjct: 239 VGYK 242 >UniRef50_Q026B5 Two component heavy metal response transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026B5_SOLUE Length = 238 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G+ SR +++ + + VDV IR +R ++I T+ G Sbjct: 156 ILEYMMRNKGRPLSRTMIVEHVWDMDYDGLTNIVDVYIRHLRSKI-DDRFQQKLIQTVRG 214 Query: 61 EGYRFCGDLE 70 GY + Sbjct: 215 IGYMIEAPDK 224 >UniRef50_Q03AM3 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=7 Tax=Lactobacillus RepID=Q03AM3_LACC3 Length = 215 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F NP +I +R +LL + RE D T+ VTI+R+R+ E P +I T+ G Sbjct: 149 LAYFFANPNQILARDQLLAALWDTREQFVADNTLTVTIKRLREKLEDDPAHTTLIRTVRG 208 Query: 61 EGY 63 GY Sbjct: 209 MGY 211 >UniRef50_A7BNW6 Two component response regulator n=1 Tax=Beggiatoa sp. SS RepID=A7BNW6_9GAMM Length = 151 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +R +LL+ GRE P DR++DV + R+R+H P II T Sbjct: 80 LRVFLAHPKRVLTRDQLLELSQGREALPFDRSIDVLVGRLRRHLGENAKNPNIIKTERSA 139 Query: 62 GYRFCGDLE 70 GY D++ Sbjct: 140 GYILATDVQ 148 >UniRef50_C4Z7A3 Two-component system, OmpR family, response regulator n=2 Tax=Eubacterium RepID=C4Z7A3_EUBE2 Length = 261 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP ++ S+ ++ + +T+DV I IRK ++ E I TI G Sbjct: 196 ILELLLKNPKQVFSKEDIFEYAWDEPYMGETKTLDVHISNIRKKIKTVTPD-EYIETIWG 254 Query: 61 EGYRF 65 GYR Sbjct: 255 IGYRL 259 >UniRef50_Q06239 Regulatory protein vanR n=26 Tax=Firmicutes RepID=VANR_ENTFC Length = 231 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + CEN G + S L ++ G E + T+ V IR +R+ T D P+ I T+ Sbjct: 164 ILRILCENKGNVVSSELLFHEIWGDEYFSKSNNTITVHIRHLREKMNDTIDNPKYIKTVW 223 Query: 60 GEGYR 64 G GY+ Sbjct: 224 GVGYK 228 >UniRef50_B9L1T3 Phosphate regulatory protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1T3_THERP Length = 253 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G++ +R ELL + G++ R VDV I RIR+ PD +I T+HG Sbjct: 176 LTALVERAGRVCTRQELLDLVWGQD-VVDLRNVDVHIHRIREALGGEPDGSNLIRTVHGI 234 Query: 62 GYRFCGDL 69 GYRF +L Sbjct: 235 GYRFVPEL 242 >UniRef50_B0CFF1 Two-component transcriptional regulator n=7 Tax=Cyanobacteria RepID=B0CFF1_ACAM1 Length = 235 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+P +I +R ++L+ + G + + ++V IR +R + P+ +I T+ G Sbjct: 170 LRYLMEHPREILTREQILENVWGFDFRGESNVIEVYIRYLRLKVQVAPEK-RLIHTVRGV 228 Query: 62 GYRF 65 GY Sbjct: 229 GYVL 232 >UniRef50_A7K1J9 DNA-binding response regulator n=13 Tax=Vibrionaceae RepID=A7K1J9_VIBSE Length = 243 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ S+ ELL + + TV TI R+R + I T+ G Sbjct: 176 LQFLATRPGRVYSKDELLDHVWNTSHSGYHHTVCSTINRLRSKLSLSDSDHHFIQTVWGV 235 Query: 62 GYRFCG 67 GY+F Sbjct: 236 GYKFQP 241 >UniRef50_B0TF57 Transcriptional regulator, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF57_HELMI Length = 277 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ K+ +R +LL ++ G + R+VD ++R+RK + T E I T+ G Sbjct: 205 LSFLAKHKKKVFTREQLLDQIWGYHFAGNLRSVDDLVKRLRKKLAQSGSTLE-IKTVWGY 263 Query: 62 GYR 64 GY+ Sbjct: 264 GYK 266 >UniRef50_C7NAQ8 Two component transcriptional regulator, winged helix family n=10 Tax=Bacteria RepID=C7NAQ8_LEPBD Length = 227 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N GKI R + + E + +DV IR +RK TP++I TI G Sbjct: 157 ILEYLIRNKGKILPRERIEDHIWNYEYEGGTNVIDVYIRYLRKKI-DDSYTPKLIHTIRG 215 Query: 61 EGYRFCGDLED 71 GY D E+ Sbjct: 216 LGYVLRVDNEN 226 >UniRef50_D0WIB8 DNA-binding response regulator VicR n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WIB8_9ACTN Length = 244 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ ++ ++ ++ G E V V I ++R P IAT+ G Sbjct: 181 LSLFMSHPGRVFTKQQIFEEGWGEEYVASGNNVMVGISKLRAKLSDDPGA--YIATVRGL 238 Query: 62 GYRFCG 67 GYR Sbjct: 239 GYRMEA 244 >UniRef50_C9L5Y5 Regulatory protein VanR n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5Y5_RUMHA Length = 299 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + CE G + S EL ++ E + T+ V IR +R+ E + + P+ I T+ Sbjct: 232 ILAILCEQKGNVVSAEELFHQIWKDEYYSKSNNTITVHIRHLREKMEDSFENPKYIKTVW 291 Query: 60 GEGYR 64 G GY+ Sbjct: 292 GCGYK 296 >UniRef50_B6JIF2 DNA-binding response regulator OmpR n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JIF2_OLICO Length = 241 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ +R ++L + R P DR++DV I ++R+ +II T+ G Sbjct: 170 LAALVQRAGRVLTRDQILDLIANRHWTPFDRSIDVLIGKLRRKLNDNNRANQIIKTVRGA 229 Query: 62 GYRFC 66 GY F Sbjct: 230 GYVFT 234 >UniRef50_A0RL52 DNA-binding response regulator n=93 Tax=Firmicutes RepID=A0RL52_BACAH Length = 241 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 F NP ++ R ELL+K+ G E + R VD+ ++R+RK ++ E I TI+G GY Sbjct: 181 LFVSNPQRVFMRDELLEKVWGFEYIGNTRAVDIMVQRLRKKLGNSG---EYIKTIYGVGY 237 Query: 64 RFC 66 + Sbjct: 238 KLD 240 >UniRef50_A9AYH1 Two component transcriptional regulator, winged helix family n=2 Tax=Chloroflexi RepID=A9AYH1_HERA2 Length = 238 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG+ SR LL + G+ DR+VD + R+RK D I T+ G Sbjct: 171 ILDLLLRNPGRAFSRNYLLDTIWGQSYVGGDRSVDNAMLRLRKKLADFGDA---IETVWG 227 Query: 61 EGYRFCGD 68 GYR + Sbjct: 228 LGYRLQAE 235 >UniRef50_B7K6Q7 Two component transcriptional regulator, winged helix family n=7 Tax=Cyanobacteria RepID=B7K6Q7_CYAP7 Length = 241 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK--PHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +PGK+ SRAEL++K+ R VDV I +IR+ ++ +I T+ Sbjct: 167 LFFLASHPGKVWSRAELIEKVWKVSCSISSDLRVVDVHIGQIRRKIQAVSSRSYLIKTVR 226 Query: 60 GEGYRFC 66 G GY+F Sbjct: 227 GVGYKFE 233 >UniRef50_A4X1M5 Two component transcriptional regulator, winged helix family n=2 Tax=Salinispora RepID=A4X1M5_SALTO Length = 251 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + + SR +LL + T+ V I+R+RK E+ + +I T+ G Sbjct: 174 LYFFMTHADRTVSREQLLSAVWDGSTGESSNTLTVHIKRLRKRLEAEGEPQPLIITVRGL 233 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 234 GYRFTPPEQ 242 >UniRef50_C3JQ04 Transcriptional regulatory protein n=2 Tax=Rhodococcus erythropolis RepID=C3JQ04_RHOER Length = 223 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L PG++ SR L++ + G + + R VD TI +R ES P P I TI G Sbjct: 156 VLLELSTEPGRVYSRDHLIRNVWGSDHER-TRVVDATILSLRSKLESDPAKPNYIKTIRG 214 Query: 61 EGYRFCG 67 GYRF Sbjct: 215 FGYRFGP 221 >UniRef50_C5QMK0 Hemin DNA-binding response regulator n=3 Tax=Bacillales RepID=C5QMK0_STAEP Length = 234 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKH---FESTPDTPEIIATIHG 60 NP I +R ++++K+ G + + DRTVDV I+R+RK E++ I T+ G Sbjct: 170 LLVSNPKHIFTRDDIIEKIWGFDYEGDDRTVDVHIKRLRKRLMQLEASVS----IHTVRG 225 Query: 61 EGYRFCGDL 69 +GY ++ Sbjct: 226 QGYMVSQNV 234 >UniRef50_B1XXD9 Two component transcriptional regulator, winged helix family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXD9_LEPCP Length = 263 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL + G + RTVD IRR+R+ FE+ E+I T+ G Sbjct: 185 LGCLMAHPDRVLSRDQLLALVWGEDGTTDPRTVDQNIRRLRRCFEAAGAG-ELIRTVRGL 243 Query: 62 GYRFC 66 GYR Sbjct: 244 GYRLT 248 >UniRef50_A5MZ62 Transcriptional regulator n=27 Tax=Bacteria RepID=A5MZ62_CLOK5 Length = 228 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N SR +L+K+ G + VDV IR +R + I TI G Sbjct: 163 LKYLMVNKDIALSRENILEKVWGYDYLGDTNIVDVYIRYLRSKI-DDKFNKKYIYTIRGL 221 Query: 62 GYRF 65 GY+F Sbjct: 222 GYQF 225 >UniRef50_UPI0001C4272B hypothetical protein BpOF4_20304 n=2 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4272B Length = 231 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRF 65 NP ++ +R +LL K+ G + +RTVD I+ IR + + II T+ G GY+ Sbjct: 169 NPKQVFNRDQLLLKIWGVDFLGDERTVDSHIKSIRLKLKKEGLSFTIIETVWGVGYKL 226 >UniRef50_A4EGJ5 Two component transcriptional regulator, winged helix family protein n=4 Tax=Rhodobacteraceae RepID=A4EGJ5_9RHOB Length = 236 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 35/71 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +P ++ R ++L + +DR++DV + R+R II T++G Sbjct: 165 ILKMFLASPNRLIKREQILDYLGSSADDAYDRSIDVKVSRLRTKLGDDAQNARIIKTVYG 224 Query: 61 EGYRFCGDLED 71 GY F ++++ Sbjct: 225 AGYIFIAEVKE 235 >UniRef50_C1XS75 Two component transcriptional regulator, winged helix family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS75_9DEIN Length = 219 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NPG+I +R E+L+++ G + +DV ++ +RK +I T+ G Sbjct: 157 VLELFVINPGRIFTREEVLERVWGPGFESDSNLIDVYVKNLRKKLYDN-----VIETVRG 211 Query: 61 EGYRFC 66 GYRF Sbjct: 212 LGYRFA 217 >UniRef50_C0BXI5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0BXI5_9CLOT Length = 237 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P ++ + ++ + + + R V+ + +RK + PD P+ I ++H Sbjct: 170 ILALLISHPRRVFTYEMIMDLVWKEDYTYYSRKAVNNHVSNLRKKLKVAPDVPDYIKSVH 229 Query: 60 GEGYRFCG 67 GY+F Sbjct: 230 SVGYKFMP 237 >UniRef50_C9XSJ2 Two-component response regulator n=15 Tax=Clostridiales RepID=C9XSJ2_CLODC Length = 228 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L F NP I +R LL ++ +D T+ V I+R+R+ E P +P+II T+ G Sbjct: 157 LLVFISNPKSIITRVRLLDELWDAAGEFVNDNTLTVYIKRLREKIEDDPSSPQIILTVRG 216 Query: 61 EGYRFCG 67 GYR G Sbjct: 217 TGYRLGG 223 >UniRef50_C0ZIT9 Two-component response regulator n=2 Tax=Bacillales RepID=C0ZIT9_BREBN Length = 226 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P +I +R +LL+ + G + + RT+DV I+R+R+ F + +I+T+ G Sbjct: 159 LAQLASFPDRIFTRDQLLELVWGGDTESDSRTIDVHIKRLREKF-TEKTNDFVISTVRGL 217 Query: 62 GYRFC 66 GY+ Sbjct: 218 GYKLE 222 >UniRef50_Q0KAU9 Response regulator, OmpR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0KAU9_RALEH Length = 204 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 38/68 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ +R +LL GRE + +R+VD+ + R+R+H + P I T+ E Sbjct: 130 LRVFVDHPQRVLNRDQLLSLTQGREAEMFERSVDLLVSRLRQHLKDDAREPRYIKTVRSE 189 Query: 62 GYRFCGDL 69 GY F + Sbjct: 190 GYVFSMPV 197 >UniRef50_B8IGE5 Two component transcriptional regulator, winged helix family n=7 Tax=Proteobacteria RepID=B8IGE5_METNO Length = 246 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ SR +LL GRE + DR++D+ + R+R+ P I T+ E Sbjct: 172 LRVFLDHPQRVLSRDQLLNLTQGREAELFDRSIDLLVSRLRQRLRDDAREPTYIKTVRSE 231 Query: 62 GYRFC 66 GY F Sbjct: 232 GYVFA 236 >UniRef50_C4L2J9 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L2J9_EXISA Length = 221 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHG 60 + PG++ R EL++ + G + + +RTVDV I+R+R F D P + I T+ G Sbjct: 157 LFQLASFPGRVYRREELIELVWGFDFEGDERTVDVHIKRLRNRF----DHPALTIRTVRG 212 Query: 61 EGY 63 GY Sbjct: 213 VGY 215 >UniRef50_B0S0W9 Two-component response regulator n=9 Tax=Clostridiales RepID=B0S0W9_FINM2 Length = 238 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N GK+ +R ++ K+ G + + RTVDV I +R+ ++ II TI Sbjct: 176 LYYLLSNVGKVLTRENIMTKIWGFDFEGESRTVDVHIATLRQKLKNASS---IIKTIRNL 232 Query: 62 GYR 64 GY+ Sbjct: 233 GYK 235 >UniRef50_C9RQT3 Two component transcriptional regulator, winged helix family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQT3_FIBSS Length = 242 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE--LKPHDRTVDVTIRRIRKHFESTPDTPEIIATI 58 + + N R+ELL+K+ G E RTVD+ I ++RK E P P+++ T Sbjct: 166 ILEYLWNNRDHAIPRSELLRKVWGYENAESVDTRTVDIHITKLRKKIEDDPAHPKLLVTF 225 Query: 59 HGEGYRFCGDLE 70 GEGY+ E Sbjct: 226 RGEGYQMRSAPE 237 >UniRef50_A7BB43 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=A7BB43_9ACTO Length = 247 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R LL + G + R VD IR IR P P I T+ Sbjct: 178 LDYLMTHPGELHTRERLLSVLWGIDFASSTRAVDHRIREIRAALGEDPSDPVFIETVPSV 237 Query: 62 GYRFCGDL 69 GYRF G + Sbjct: 238 GYRFIGRV 245 >UniRef50_UPI0001C37682 two component transcriptional regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37682 Length = 233 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +N ++ + E +K+ E T++V IR +R+ E +P +I TI G Sbjct: 167 LLYMLKNKNRVIPKDEFFEKVWETEYVGDV-TLNVHIRHLREKIEDDAGSPAVIKTIWGV 225 Query: 62 GYRFC 66 G+ Sbjct: 226 GFMLE 230 >UniRef50_C8WRL2 Two component transcriptional regulator, winged helix family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL2_ALIAD Length = 231 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP K+ S+ +L ++ G + V+ + +RK PD P I T+ G Sbjct: 159 LELFMRNPNKVLSKEVILDRVWGPDADVIGNAVENYVHFLRKKI-DEPDLPSYITTVRGV 217 Query: 62 GYRFCGD 68 GY F D Sbjct: 218 GYMFHPD 224 >UniRef50_C7MP89 Response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MP89_CRYCD Length = 243 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 6 CENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 + G+ + ++ + + P T+ V IR +RK E+ P P +I T+ G+GYR Sbjct: 182 ASHRGQTLTARKIYESIWDDAYLPQSSNTIMVHIRNLRKKLENDPRNPVVIQTVWGKGYR 241 >UniRef50_B3WB53 Response regulator n=35 Tax=Bacilli RepID=B3WB53_LACCB Length = 233 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + + SR +LL + G + +DV IR +R + + ++I T+ G Sbjct: 163 LVELVAHQDEACSRDDLLAAVWGTDFDGQPNILDVYIRNLRHKIDDHSGSKKLIHTVRGV 222 Query: 62 GYRFCGDL 69 GY ++ Sbjct: 223 GYMLSANV 230 >UniRef50_C6NVH5 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVH5_9GAMM Length = 247 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SR LL + GR+ +RTVDV IRR+R+ II T+ GE Sbjct: 171 LRLFATNPDRVYSREALLDHIWGRQSFIEERTVDVHIRRLRRALAKVG-YANIIETVRGE 229 Query: 62 GYR 64 GYR Sbjct: 230 GYR 232 >UniRef50_C0YPJ5 DNA-binding response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YPJ5_9FLAO Length = 224 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K+ R E+L+K+ G ++ +RT+DV IRR+R+ I T+ G Sbjct: 164 LYLLASNTEKVFKREEILEKVWGNDVIVGERTIDVHIRRLREKLGINT-----IQTLKGI 218 Query: 62 GYRFC 66 GY+ Sbjct: 219 GYKLI 223 >UniRef50_A9G6M8 Two-component response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G6M8_SORC5 Length = 233 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ +RA+L+ ++ G DRT+D ++ +RK ++I T+ G Sbjct: 159 LACMLAAPGRVFTRAQLIDRVWGDGFAITDRTIDSHVKGLRKKVVEAGGDADLIETVRGV 218 Query: 62 GYR 64 GYR Sbjct: 219 GYR 221 >UniRef50_D1SG74 Putative two component transcriptional regulator, winged helix family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SG74_9ACTO Length = 197 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E+P ++ +R +LL + G E RTVDV +RR+R F P+TP ++ T++G Sbjct: 126 LLFLAEHPRRVFTRLQLLANVWGYEHAV-ARTVDVHVRRLRAKFG--PETP-LVTTVYGV 181 Query: 62 GYRFCGD 68 GYR D Sbjct: 182 GYRLADD 188 >UniRef50_A6TL65 Two component transcriptional regulator, winged helix family n=6 Tax=Bacteria RepID=A6TL65_ALKMQ Length = 240 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ N G++ R E+ + + G RT+DV ++ +R+ + +I T G Sbjct: 174 ILVLLIRNKGRVFGREEIFQLVWGEPCY-DTRTIDVHVKNLREKLKDIKTKGPMIETKWG 232 Query: 61 EGYRFCGD 68 GY F D Sbjct: 233 VGYYFRKD 240 >UniRef50_Q02BS1 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02BS1_SOLUE Length = 129 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ G+I R LL ++ G + RT+DV +RR+RK D + I TI G Sbjct: 46 LALLVQHAGEIIPREALLMQVWGYGAEIRTRTLDVHVRRLRKKLGGYAD--QYIETIFGI 103 Query: 62 GYRFCG 67 GYRF Sbjct: 104 GYRFQP 109 >UniRef50_A8VQC0 Response regulator receiver protein n=2 Tax=Bacillaceae RepID=A8VQC0_9BACI Length = 240 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++H ++P ++ SR EL++ + G + DR VD+ ++RIR+ D I TI GE Sbjct: 173 LIHLAKHPNRVWSRDELIEHVWGWDYTGSDRAVDLAVKRIRQALRKWDDEHGGIRTIRGE 232 Query: 62 GYRFCG 67 GY F Sbjct: 233 GYSFHA 238 >UniRef50_C8P150 Regulatory protein VanR n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P150_ERYRH Length = 231 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + NPG+I + +L + + TV V IR +RK E P+ P+I+ + Sbjct: 163 ILRLLLGNPGRIYTMEQLFEIVWEDTYFYSCSNTVMVHIRNLRKKVEDEPNKPKIVKNVW 222 Query: 60 GEGYRFCG 67 G+GY + G Sbjct: 223 GKGYTYDG 230 >UniRef50_C9XRL7 Two-component response regulator n=4 Tax=Clostridium difficile RepID=C9XRL7_CLODC Length = 225 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L EN ++ S+ E+ ++ TV V I ++RK S + I T+ G Sbjct: 159 ILLFLAENKEQVFSKIEIYNQVWKMPDIGDQHTVQVHIAQMRKKINSLSREHQYIQTVWG 218 Query: 61 EGYRFCG 67 +GY+F Sbjct: 219 KGYKFVP 225 >UniRef50_Q47ZA2 DNA-binding response regulator n=20 Tax=Alteromonadales RepID=Q47ZA2_COLP3 Length = 238 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++Q+R + K + GRE DR+VDV I R+RK + DTP I TI G+ Sbjct: 169 LWLLAGKAGEVQNRDYIYKAVIGREYDGLDRSVDVRISRLRKKLHDSTDTPFRIKTIWGQ 228 Query: 62 GYRFCGD 68 GY F D Sbjct: 229 GYLFVPD 235 >UniRef50_C7N3P4 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=4 Tax=Bacteria RepID=C7N3P4_SLAHD Length = 235 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G I + +L + + G + + V +RR+R+ E P P+ I T+ G Sbjct: 167 LSRLVRSRGSIVTSDDLAQAVWGTSF-GYANALMVHVRRLREKIEDDPSDPQWILTVRGL 225 Query: 62 GYRFCGD 68 GYR D Sbjct: 226 GYRLAKD 232 >UniRef50_A4G2G5 Phosphate regulon transcriptional regulatory protein PhoB n=3 Tax=Oxalobacteraceae RepID=A4G2G5_HERAR Length = 229 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P + SR +L+ ++ GR + +RTVDV + R+RK +I T+ G Sbjct: 166 LKYLLAHPNHVYSRDQLIDRVWGRHIAIDERTVDVNVLRLRKVLGE---GRYLIKTVRGV 222 Query: 62 GYRFC 66 GY Sbjct: 223 GYMLT 227 >UniRef50_B2XT10 Transcriptional regulatory protein 1 n=3 Tax=Heterosigma akashiwo RepID=B2XT10_HETA2 Length = 231 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKP--HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F KI +R ++K++ G R VDV I ++R E P P+I+ TI Sbjct: 163 LKVFLLEKNKILTRKTIIKRVWGFNYSSHIDIRVVDVYISKLRVKIEDDPTNPQILKTIR 222 Query: 60 GEGYRF 65 G GY+F Sbjct: 223 GIGYKF 228 >UniRef50_C8WIG3 Two component transcriptional regulator, winged helix family n=36 Tax=Bacteria RepID=C8WIG3_EGGLE Length = 248 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+I + L + G ++ ++ IRR+R+ E+ P P + T G Sbjct: 181 ILSVLARNAGRIVTIDSLCEACWGTSF-GYENSLMAHIRRLREKIEADPSAPVSLVTARG 239 Query: 61 EGYRFC 66 GY+ Sbjct: 240 LGYKLV 245 >UniRef50_Q7UPW2 Two-component response regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UPW2_RHOBA Length = 268 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ENP ++ +R+ELL ++ R VD I R+RK E +P P + T+ Sbjct: 191 LRYFVENPERVINRSELLTQVWEMSGNLQTRAVDQFIARLRKAIEPSPAEPVHLLTVRDA 250 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 251 GYRFVLEPE 259 >UniRef50_B6QXV6 Two component transcriptional regulator, winged helix family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QXV6_9RHOB Length = 230 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F ++PG + SR ++L R+ DR+VD I+R+R+ E P P I T Sbjct: 163 VLRFFAQSPGVVFSREDILAVARTRQHAGKDDRSVDTLIKRLRRKIEVEPSNPMHILTEW 222 Query: 60 GEGYRF 65 G+GY F Sbjct: 223 GKGYTF 228 >UniRef50_C7H3P4 DNA-binding response regulator SrrA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3P4_9FIRM Length = 232 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ ++ + + + D ++V I +RK F + I T+ G Sbjct: 166 ILQLLMSSPSKVFTKNNIFESVWNENFVGDDNAINVHIGNLRKKFAKVNPEEKYIQTVWG 225 Query: 61 EGYRFCG 67 G++ G Sbjct: 226 LGFKMQG 232 >UniRef50_B0C620 Two component transcriptional regulator, winged helix family n=19 Tax=Bacteria RepID=B0C620_ACAM1 Length = 226 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 1 AML-HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P ++ S+ +LL ++ G + P ++V IR +R+ F S + I T+ Sbjct: 161 ILAEVLLRHPMQVMSKEQLLNRVWGYDYDPGSNIIEVYIRHLRRKFGS-----QYIETVR 215 Query: 60 GEGYRFCG 67 G GYR Sbjct: 216 GMGYRLNS 223 >UniRef50_A0LPJ2 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=A0LPJ2_SYNFM Length = 263 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +RAE+L+ + G P V+V I R+R+ E P+ P ++ T Sbjct: 190 LEYLMRNKGRVVTRAEILENVWGYNFVPATNVVEVHICRLREKLER-PNKPRLLQTFRKA 248 Query: 62 GYRFCGD 68 GY D Sbjct: 249 GYALVED 255 >UniRef50_D1CG76 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CG76_THET1 Length = 243 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 31/70 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ SR +L G +DV I RIRK P+ P+ IATI G Sbjct: 167 ILQRLMSSPNRVVSRDDLAMYAAGYVADTSSNQIDVYIGRIRKKLGDDPNDPKYIATIRG 226 Query: 61 EGYRFCGDLE 70 GY+F Sbjct: 227 SGYKFLSPDR 236 >UniRef50_C4ZP42 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=C4ZP42_THASP Length = 242 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 40/70 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG+I R L + ++G + P DR+VDV +RR+R + T +IATI G Sbjct: 169 VLALLVRHPGEILDRDRLSRAVSGHDWSPQDRSVDVLVRRLRAKLDDPARTDSLIATIRG 228 Query: 61 EGYRFCGDLE 70 EGYR D+E Sbjct: 229 EGYRLAADVE 238 >UniRef50_Q3DCX6 DNA-binding response regulator n=7 Tax=Streptococcus agalactiae RepID=Q3DCX6_STRAG Length = 223 Score = 88.2 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H P +I +R ELL + G + +R VD I +IR+ E PD I T+ G Sbjct: 158 VLFHLLSYPNRIFTRLELLDSIWGMDTDLDERVVDACINKIRRKVEHLPD--FKIETVRG 215 Query: 61 EGYR 64 GYR Sbjct: 216 VGYR 219 >UniRef50_C6WE10 Putative two component transcriptional regulator, winged helix family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WE10_ACTMD Length = 170 Score = 88.2 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LH CE+P ++ R L+ ++ G RTVDV IRRIR+ I+T+ G Sbjct: 86 LLHLCEHPDRVHRRHALMHRVWGASPVVDTRTVDVHIRRIRRKLGD---AARFISTVRGV 142 Query: 62 GYRFC 66 GYR Sbjct: 143 GYRLE 147 >UniRef50_C0ET35 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ET35_9FIRM Length = 231 Score = 88.2 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ++ G I SR ++L + G + R+VD ++++R I T++G Sbjct: 169 LEYFVKHKGMILSRDKILDSVWGFDYIGGYRSVDTLVKKLRAKL---TKEYPYIKTVYGV 225 Query: 62 GYRFC 66 GY F Sbjct: 226 GYCFD 230 >UniRef50_A4FGQ8 Putative uncharacterized protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FGQ8_SACEN Length = 208 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ENPG++ R LL+ + G E RTVDV +RR+R + I TI G Sbjct: 114 LLFLAENPGRVHRRGSLLRLVWGIESALSTRTVDVHVRRLRGKCGP---ELDFITTIRGV 170 Query: 62 GYRFCG 67 GYRF G Sbjct: 171 GYRFDG 176 >UniRef50_C7PII2 Two component transcriptional regulator, winged helix family n=5 Tax=Sphingobacteriales RepID=C7PII2_CHIPD Length = 235 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G++ +R ++L+ + G + P RT+D I RK+FE ++ G Sbjct: 170 LKLLIENKGEVVTREKILQVVWGYNVYPTTRTIDNFILNFRKYFEEDSRNSRYFHSVRGV 229 Query: 62 GYRFC 66 GY+F Sbjct: 230 GYKFT 234 >UniRef50_B4U9M6 Two component transcriptional regulator, winged helix family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9M6_HYDS0 Length = 225 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP K R LL K+ G VDV I+ IR E P P++I TI G Sbjct: 159 LKVLAQNPNKTIRREVLLNKVWGIASDYDSNIVDVYIKNIRNKLEDKP--PKLILTIRGR 216 Query: 62 GYRFCGD 68 GY + Sbjct: 217 GYMLSTE 223 >UniRef50_A7GEN9 DNA-binding response regulator n=18 Tax=Firmicutes RepID=A7GEN9_CLOBL Length = 229 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S+ ++ +K+ G + + TV I++IR F + IAT+ G Sbjct: 160 IVELLALHPEQVFSKEQIYEKVWGYDAEGDANTVAEHIKKIRAKFIKRNASLNHIATVWG 219 Query: 61 EGYRFC 66 GYR+ Sbjct: 220 VGYRWE 225 >UniRef50_Q1YN14 Putative transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YN14_MOBAS Length = 251 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E G++ SR LL+ + + DR+VDV + R+RK + P P + T++G Sbjct: 180 LRAFLEAQGRVLSRDFLLELFSASGEEAFDRSVDVRVSRLRKKLDEDPKKPVHVRTVYGA 239 Query: 62 GYRFCGDLE 70 GY F ++ Sbjct: 240 GYVFATRVD 248 >UniRef50_B7HUH0 DNA-binding response regulator n=65 Tax=Firmicutes RepID=B7HUH0_BACC7 Length = 215 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 F + G I +R +LL + G + +RTVD +RR+RK II T G GY Sbjct: 155 FLSHKGMILTRKKLLDIVWGFDYFGEERTVDTHVRRLRKKVGEN-----IIKTHRGLGYS 209 Query: 65 FCGDLE 70 E Sbjct: 210 LEEQSE 215 >UniRef50_Q2S740 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S740_HAHCH Length = 242 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 36/70 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + SR + +++ E DR++D+ + RIRK P P +I TI GE Sbjct: 170 LYYLARQAGSVISRDLVYREIFNLEYDGLDRSIDLRVSRIRKRLGDDPKQPRLIKTIRGE 229 Query: 62 GYRFCGDLED 71 GY F + ++ Sbjct: 230 GYLFVDNADN 239 >UniRef50_A6WIX6 Two component transcriptional regulator, winged helix family n=3 Tax=Bacteria RepID=A6WIX6_SHEB8 Length = 227 Score = 87.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKH---FESTPDTPEIIATI 58 + H +P ++ +R +LL+ + G + P VDV I+RIR E I +I Sbjct: 158 LEHLMRSPNQVLTRGQLLEHVWGYDFDPCTNVVDVCIKRIRSKMASLEKAGKMVGAIESI 217 Query: 59 HGEGYRFC 66 G GYR Sbjct: 218 RGTGYRLS 225 >UniRef50_C4LLE8 Two-component system, response regulator n=19 Tax=Corynebacterium RepID=C4LLE8_CORK4 Length = 268 Score = 87.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG++ +R +L+ ++ +R VDV I +R+ + I T+ G Sbjct: 202 LVALALRPGQVLTRHDLVTEVWDTTWVGDERIVDVHIGNLRRKLGTDTRGRGFIDTVRGV 261 Query: 62 GYR 64 GYR Sbjct: 262 GYR 264 >UniRef50_Q0IAU4 Two-component response regulator n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IAU4_SYNS3 Length = 199 Score = 87.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F +NPG + +R ++ + G+ D +DV IR +RK E P ++I T+ G Sbjct: 136 LVYFLQNPGMVLARKTIMNNVWGQSWTGDDNLLDVYIRYLRKKIER-PKLEKLIQTVRGV 194 Query: 62 GYRF 65 GY Sbjct: 195 GYIL 198 >UniRef50_C1SI97 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SI97_9BACT Length = 236 Score = 87.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 +L+F G + SR +++ + G+ R++DV I+ +R+ E P P+I+ T+ Sbjct: 169 ILLYFVGKTGHVLSRDDIVNDIWGKNSIYSWSRSLDVHIKNLRQKIEINPKNPDIVKTVS 228 Query: 60 GEGYR 64 G GY+ Sbjct: 229 GVGYK 233 >UniRef50_C4ZFF8 DNA-binding response regulator n=60 Tax=Bacteria RepID=C4ZFF8_EUBR3 Length = 248 Score = 87.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + G + S EL + E + T+ V IR +R+ T DTP+ I TI Sbjct: 183 ILHVLLSSAGNVVSIEELFHAVWKDEYYSKNSSTITVHIRHLREKLNDTSDTPQYIKTIW 242 Query: 60 GEGYR 64 G GY+ Sbjct: 243 GVGYK 247 >UniRef50_D1VT61 Regulatory protein VanR n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT61_9FIRM Length = 227 Score = 87.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP KI S+ L + + E D T++V I +R + E I T+ Sbjct: 162 ILKILLKNPNKIFSKENLYRSVWNDEYFFEDDTINVHISNLRSKIKKLDTE-EYIETVWA 220 Query: 61 EGYRF 65 GYR Sbjct: 221 VGYRL 225 >UniRef50_C0CKG8 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKG8_9FIRM Length = 223 Score = 87.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N + +R ++L+K+ G + + RT+D I+ +R +S I TI G Sbjct: 159 LVYLMQNRDIVLTRDQILEKVWGFDYEGDIRTIDTHIKMLRMDLKSCGS---YIRTIRGM 215 Query: 62 GYRFCGD 68 GY + Sbjct: 216 GYTLSSE 222 >UniRef50_UPI0001C318D2 two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318D2 Length = 224 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F +P + SR ++L + G + P V+V IR +R+ E P P I T+ Sbjct: 158 LAYFLRHPDQALSRQQILSAVWGYDFDPGTNVVEVYIRYLRRKLE-LPGRPTPIDTLRSV 216 Query: 62 GYRFCG 67 GYR Sbjct: 217 GYRLTT 222 >UniRef50_C8WRL6 Two component transcriptional regulator, winged helix family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL6_ALIAD Length = 221 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 5/70 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ N + SR ELL+++ G + VDV I +R+ P+ I T+ G+ Sbjct: 156 LLYLLRNVNRTCSRQELLERVWGFQAPGDTNVVDVYIGYLRQKL--DPER-RYIKTVRGQ 212 Query: 62 GYRFCGDLED 71 GYR ++E+ Sbjct: 213 GYRL--EVEE 220 >UniRef50_B8GBX2 Two component transcriptional regulator, winged helix family n=9 Tax=Chloroflexi RepID=B8GBX2_CHLAD Length = 247 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +N G + + LL K+ G E + + + I +R+ E P P I T G Sbjct: 167 LYHLVQNAGYVLTHEMLLSKVWGPEYRDESHYLRLYITYLRQKIEEDPSNPRYILTERGV 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFV 231 >UniRef50_Q97FK2 Response regulator (CheY-like receiver domain and HTH-type DNA-binding) n=2 Tax=Clostridium RepID=Q97FK2_CLOAB Length = 225 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP K+ ++ + + + E +R V V + +R + I T+ G Sbjct: 161 ILELLISNPKKVFTKQNIFESVWSEEYILDERVVTVHVSNLRNKLK---HGDTYIKTVWG 217 Query: 61 EGYR 64 GY+ Sbjct: 218 IGYK 221 >UniRef50_C3RJ29 Response regulator gtcR n=2 Tax=Bacteria RepID=C3RJ29_9MOLU Length = 226 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+P ++ ++ L + + E D T++V I +IR + E I T+ G Sbjct: 161 LKILLESPTRVFTKDILFEMVWDHEDSGDDNTLNVHISKIRSKLKQANPNQEYIETVWGI 220 Query: 62 GYR 64 GY+ Sbjct: 221 GYK 223 >UniRef50_D2R142 Two component transcriptional regulator, winged helix family n=2 Tax=Planctomycetaceae RepID=D2R142_9PLAN Length = 237 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SR ELL + RT+D+ I R+R+ P P ++ T+ G+ Sbjct: 165 RYLASHAGRAISRDELLVNVWRISPDGLPTRTIDMQIARLREKLRDDPTQPRVLLTVRGK 224 Query: 62 GYRFC 66 GY F Sbjct: 225 GYMFA 229 >UniRef50_Q88HA6 Transcriptional regulatory protein RstA, putative n=5 Tax=Pseudomonas RepID=Q88HA6_PSEPK Length = 279 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 36/65 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ N G++ +R +L+++ G E DR+VDV I ++R+ F+ I T+ G+ Sbjct: 209 LVVLARNAGEVMNRDRILQQLRGIEFNGTDRSVDVAISKLRRKFDDNAGEARKIKTVWGK 268 Query: 62 GYRFC 66 GY F Sbjct: 269 GYLFS 273 >UniRef50_P07545 Regulatory protein virG n=21 Tax=cellular organisms RepID=VIRG_AGRT5 Length = 253 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 41/69 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F E P + SR +LL RE + +DR++DV I R+R+ E P TP++I T G Sbjct: 176 LVAFLEKPRDVLSREQLLIASRVREEEVYDRSIDVLILRLRRKLEGDPTTPQLIKTARGA 235 Query: 62 GYRFCGDLE 70 GY F D++ Sbjct: 236 GYFFDADVD 244 >UniRef50_B4U9Z2 Two component transcriptional regulator, winged helix family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9Z2_HYDS0 Length = 229 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN KI +R +++ + +DRTVDV I+ +R I TI G Sbjct: 163 ILKYLLENIDKIMTRDKIINMLWSYGTDINDRTVDVHIKHLRDKLGDFGK---YIRTIRG 219 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 220 VGYKFSLKDE 229 >UniRef50_Q63CK0 Response regulator n=95 Tax=Firmicutes RepID=Q63CK0_BACCZ Length = 254 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ SR +L++ + G + + ++RT+DV I R+R+ F+ I TI G Sbjct: 188 LFTLGSKAGRTCSREQLIEDVWGYDFEGNERTLDVHINRLREKFQEEKSKFS-IKTIRGL 246 Query: 62 GYRFC 66 GYR Sbjct: 247 GYRLE 251 >UniRef50_B0ACA3 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACA3_9CLOT Length = 222 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN ++ +R +LL + G + R VD I+ IRK P I T+ G Sbjct: 159 ILKSLIENYPQVVTREKLLDSIWGYDYFGDTRIVDAHIKNIRKKI-ILP----YIKTVKG 213 Query: 61 EGYRFCGDL 69 GY D+ Sbjct: 214 IGYTLQKDI 222 >UniRef50_C6J181 Two-component system response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J181_9BACL Length = 225 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ +R L+ ++ G + + ++V + +R E+ + P +I T+ G Sbjct: 161 LCFFMKHPQQVLTRELLMDRVWGFDFRGESNVLEVYVGYLRSKLEAQ-NEPRLIHTVRGA 219 Query: 62 GYRF 65 GY Sbjct: 220 GYVL 223 >UniRef50_Q5ZRW6 DNA-binding response regulator n=6 Tax=Legionella RepID=Q5ZRW6_LEGPH Length = 242 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + P ++ R LL+ +L P DR +DV I R+R+ E P +I TI Sbjct: 165 LLTFVQQPQRVLDREFLLQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNG 224 Query: 62 GYRFCGDL 69 GY F + Sbjct: 225 GYMFTARV 232 >UniRef50_B7IIP6 Transcriptional regulatory protein ResD n=34 Tax=Bacteria RepID=B7IIP6_BACC2 Length = 221 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 5/64 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N K+ +R +++K+ G + R +D I+ +RK + P I TI G Sbjct: 160 ILQLLFQNERKVLTRENIVEKVWGYDYFGETRIIDTHIKNLRKKL-AIP----YIKTIKG 214 Query: 61 EGYR 64 GY+ Sbjct: 215 IGYK 218 >UniRef50_Q2P1E0 VirG-like two component response regulator n=13 Tax=Proteobacteria RepID=Q2P1E0_XANOM Length = 259 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + PG+ SR L++ DR++DV I R+R+ E P P +I T G Sbjct: 189 LRAFVDAPGRPLSREHLMRATR-LHEDVFDRSIDVQILRLRRKLEQDPREPTLIVTQRGA 247 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 248 GYVFTPSVE 256 >UniRef50_B0P738 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P738_9FIRM Length = 224 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + +R +++ + + DRTVD I+ +R I T+ Sbjct: 160 LYYLIRNTNIVLTRDQIICTVWDMDYAGDDRTVDTHIKCLRAKLGPYAK---CIVTVRKV 216 Query: 62 GYRFC 66 GY+F Sbjct: 217 GYKFE 221 >UniRef50_C0ZDJ8 Two-component response regulator n=5 Tax=Firmicutes RepID=C0ZDJ8_BREBN Length = 235 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L F N K R +LL K++ G + + T+ V I+R+R E P PE I T G Sbjct: 164 LLTFMMNAHKALKRDDLLMKVSEGEDAFFDENTLSVYIKRLRAKVEDDPKNPEFIVTQRG 223 Query: 61 EGYRFCGDL 69 GYR+ D+ Sbjct: 224 LGYRWNKDV 232 >UniRef50_A9FZS4 Response regulator n=2 Tax=Myxococcales RepID=A9FZS4_SORC5 Length = 270 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 37/58 (63%) Query: 10 GKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 G+ SR E+L+K+ G E P +RTVD I ++RK E +PD PE I T++G GY+ Sbjct: 213 GQPVSREEILQKIWGIEAGPSNRTVDNFIVKLRKKIERSPDKPEHILTVYGFGYKLAP 270 >UniRef50_C3X860 Response regulator receiver protein n=2 Tax=Oxalobacter formigenes RepID=C3X860_OXAFO Length = 233 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ SR++LL K+ +L +RTVDV + R+RK + ++ T+ G Sbjct: 166 LKFLMANPDRVFSRSQLLDKVWSNQLDIEERTVDVHVLRLRKALK---GQENLVRTVRGM 222 Query: 62 GYRFC 66 GY Sbjct: 223 GYMLS 227 >UniRef50_A6TSH7 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiales RepID=A6TSH7_ALKMQ Length = 231 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 29/67 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG+ + EL K+ G + RTV V I IR E + P + G Sbjct: 160 ILSFLMQNPGQYYTPKELYYKIWGAKSYGDPRTVIVHIHNIRNKIEEDVNNPRFLKMEWG 219 Query: 61 EGYRFCG 67 +GY F Sbjct: 220 QGYYFDP 226 >UniRef50_B0MTN6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTN6_9BACT Length = 217 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ SR E+ ++ G + DRT+DV +R+IR+ I+T+ G Sbjct: 157 LALLASSPGKLFSREEIYSRIWGDSVVVGDRTIDVHVRKIRQKIGD-----GHISTVKGM 211 Query: 62 GYRFC 66 GY++ Sbjct: 212 GYKYE 216 >UniRef50_UPI0001C355EA transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355EA Length = 234 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ ++ ++ + ++ +V+ I R+RK E P I TI G Sbjct: 164 LYYLASNQGQVINKEQIYYHLWKEDIGVGSNSVETLIMRLRKKLEPDKSDPIFIETIRGG 223 Query: 62 GYRF 65 GYRF Sbjct: 224 GYRF 227 >UniRef50_B8HEE3 Two component transcriptional regulator, winged helix family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEE3_ARTCA Length = 265 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F P ++ ++ LL+++ G E + V+V I +R+ + +II T+ G Sbjct: 195 LAAFMGAPRRVWTKESLLRRVWGDEWATDEHLVEVHIGNLRRKIRAGGSEAQIIRTVRGV 254 Query: 62 GYRFCGD 68 GY Sbjct: 255 GYGLVPP 261 >UniRef50_B1ZS16 Two component transcriptional regulator, winged helix family n=3 Tax=Verrucomicrobia RepID=B1ZS16_OPITP Length = 265 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ +R + +K+ +DV +RR+R+ E+ P P +I TI G Sbjct: 202 LELFLQNPRRVLTRTLIAEKVWEASYDLETNLIDVYVRRLRQKLEA-PGQPPLIKTIRGT 260 Query: 62 GYRFC 66 GY+ Sbjct: 261 GYQLS 265 >UniRef50_A7GB96 DNA-binding response regulator n=16 Tax=Bacteria RepID=A7GB96_CLOBL Length = 232 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F ENP + S ++L ++ E + T+ V IRR+R E P P+ I T+ Sbjct: 160 LCMFMENPDIVLSPEQILSRLWDCNENYIDNNTLTVYIRRLRTKIEDNPGEPQKIVTVRR 219 Query: 61 EGYRFCG 67 GY++ Sbjct: 220 MGYKWST 226 >UniRef50_C7TGP3 Two-component response regulator n=8 Tax=Lactobacillus RepID=C7TGP3_LACRL Length = 226 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRF 65 NPG++ SR +L +K+ G + + +R + IRRIR I T+ G GY++ Sbjct: 168 NPGQVFSREQLYEKIWGYDAQGDERVITEHIRRIR-KLFDACQVTSPIVTVWGVGYKW 224 >UniRef50_UPI0001C32387 two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32387 Length = 284 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 N G++ R + +++ G + DR+VDV +R++R+ E I T G G Sbjct: 188 RLLAGNAGQVLEREAIYQRVWGYAMAHGDRSVDVFVRKLRQKLERASPQWRYIHTHFGVG 247 Query: 63 YRFCGD 68 YRF + Sbjct: 248 YRFAPE 253 >UniRef50_C1A8B6 OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8B6_GEMAT Length = 245 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ G I SR ELL+++ G + RTVD + +R+ E+ P P + T+ Sbjct: 179 LVALVRRDGAIASREELLREVWGYDDSVVSRTVDTHMAELRRKLETDPSEPRWLLTVRKT 238 Query: 62 GYRFC 66 GYR Sbjct: 239 GYRMA 243 >UniRef50_Q030C5 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=6 Tax=Lactococcus lactis RepID=Q030C5_LACLS Length = 234 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E+ G+I SR ++L+++ G TVD +R +RK + +I TI G Sbjct: 172 LLFLFEHQGEIISRDDILEEVWGMNFGGQLNTVDTYVRYLRKKLDKN-----MIETIRGL 226 Query: 62 GYRFCGD 68 GYR D Sbjct: 227 GYRLNKD 233 >UniRef50_A1S1W0 Response regulator receiver protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1W0_SHEAM Length = 237 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G+I R +L K TG +RT+D I R+R+ D P I TI G Sbjct: 167 ILAQLAKHAGQIVCREDLFKYTTGAPYDGLNRTMDNRISRLRRKLGDNMDDPFKIKTIWG 226 Query: 61 EGYRFCGDL 69 +GY F D+ Sbjct: 227 KGYLFVPDI 235 >UniRef50_UPI00019732E7 DNA-binding response regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019732E7 Length = 236 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE--LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + G++ SR +L + + + TV I+ +RK TP E I + Sbjct: 165 LFCLASHVGQVLSREQLYQMVWDENSVYNVDE-TVKAHIKSLRKKL--TPSGAEYIKNVW 221 Query: 60 GEGYRFCGD 68 G GYRF D Sbjct: 222 GIGYRFSTD 230 >UniRef50_Q187R8 Two-component response regulator n=6 Tax=Clostridiales RepID=Q187R8_CLOD6 Length = 223 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN G+I + ++L + E D V V IRR+R E P P+ I T +G Sbjct: 155 LSYLIENKGQILLKEQILHHIWDSEENYVDDNIVSVNIRRLRVKVEDDPSNPKYIKTAYG 214 Query: 61 EGYRFCGDLE 70 GY + ++E Sbjct: 215 MGYLWN-EVE 223 >UniRef50_D0LJX0 Two component transcriptional regulator, winged helix family n=43 Tax=Bacteria RepID=D0LJX0_HALO1 Length = 243 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F G++Q+R LL + G E RTVD ++R+R+ + T+ G Sbjct: 173 LYAFISRRGRVQTRDALLSDVWGIEADVTTRTVDTHVKRLREKLGDAG---RYVETLRGV 229 Query: 62 GYRF 65 GYRF Sbjct: 230 GYRF 233 >UniRef50_A6VRR3 Two component transcriptional regulator, winged helix family n=2 Tax=Gammaproteobacteria RepID=A6VRR3_MARMS Length = 243 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 37/70 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L N G +R +L+ ++ R DRT+DV I RIR+ P P++I T+HG Sbjct: 172 LLALKANEGVALTRDQLMDRIKNRTWNATDRTIDVLIGRIRRKLSEDPHCPQMIITVHGV 231 Query: 62 GYRFCGDLED 71 GY + +D Sbjct: 232 GYLLSNNPQD 241 >UniRef50_B7JEB2 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=9 Tax=Bacillus cereus group RepID=B7JEB2_BACC0 Length = 220 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ +N G+ S +L ++ G + TV I+ +R II T+ G Sbjct: 157 ILMLLVQNNGRTLSHEVILSRVWGYDFDGDGSTVHTHIKNLRAKLPDN-----IIKTVRG 211 Query: 61 EGYRFC 66 GYR Sbjct: 212 VGYRLE 217 >UniRef50_A1VSF0 Two component transcriptional regulator, winged helix family n=4 Tax=Betaproteobacteria RepID=A1VSF0_POLNA Length = 246 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + P +I R +L R+L DR+VDV + R+R+ ES P P I T++G Sbjct: 179 LLQFLQRPNRILDREQLCG---DRDLSALDRSVDVRVSRLRRKLESDPQHPTTIRTVYGA 235 Query: 62 GYRFCGDLE 70 GY ++ Sbjct: 236 GYLLAAEVR 244 >UniRef50_Q189I8 Two-component response regulator n=5 Tax=Clostridiales RepID=Q189I8_CLOD6 Length = 229 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+ S+ +L + ++ ++ I R+R + I T+ G Sbjct: 162 IVKLLATNQGRAFSKEQLYNAIWKEPYYGNENVLNTHINRLRNKLSDGMEKNNYIKTLWG 221 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 222 IGYKMEEE 229 >UniRef50_D1AFR9 Two component transcriptional regulator, winged helix family n=4 Tax=Fusobacteriaceae RepID=D1AFR9_SEBTE Length = 221 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N GK+ +R LL ++ G + +R VD I+R RK D +I T+ G Sbjct: 156 LDYIIKNKGKLLTRDMLLNEVWGYDFDGDNRVVDTLIKRTRKKLSPYGD---LIKTVRGM 212 Query: 62 GYRFC 66 GY F Sbjct: 213 GYMFD 217 >UniRef50_C9XJX9 Two-component system response regulator n=108 Tax=Firmicutes RepID=C9XJX9_CLODC Length = 222 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 5/69 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E ++ +R LL + G + R VD I+ IRK P I T+ G Sbjct: 159 ILKALIEKYPQVITREGLLDSIWGYDYYGDTRIVDAHIKNIRKKI----SLP-YIKTVKG 213 Query: 61 EGYRFCGDL 69 GY D+ Sbjct: 214 IGYTLEKDI 222 >UniRef50_Q1AXX7 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXX7_RUBXD Length = 231 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG+ +RA++ + ++ R +DV I R+R E P PEII T+ Sbjct: 162 ILALLLRRPGQAFTRAQISEAVSTGSHYLASRYIDVHISRLRSKIERDPSRPEIIQTVPS 221 Query: 61 EGYR 64 GYR Sbjct: 222 VGYR 225 >UniRef50_A5GA68 Two component transcriptional regulator, winged helix family n=8 Tax=Desulfuromonadales RepID=A5GA68_GEOUR Length = 243 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 33/69 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + G+ R LL+ + G RT+D I R+RK+FE P P T+ G Sbjct: 167 LSLFFQKEGEAIPRKTLLESVWGYSSDAETRTLDNFIVRLRKYFEPDPAKPVYFQTVRGV 226 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 227 GYRFSREAR 235 >UniRef50_B1XPE6 Two-component response regulator; transcriptional regulatory protein n=21 Tax=Cyanobacteria RepID=B1XPE6_SYNP2 Length = 267 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SR+ELL++ + + RT+D + +RK E P P +I T+ Sbjct: 161 LYVLAQANGEPLSRSELLRRAW-PDAIDNPRTIDTHVLSLRKKIEQDPRQPNLIQTVRNV 219 Query: 62 GYRFCGD 68 GYRF D Sbjct: 220 GYRFNLD 226 >UniRef50_B2V7Q1 Two component transcriptional regulator, winged helix family n=3 Tax=Hydrogenothermaceae RepID=B2V7Q1_SULSY Length = 231 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + GK+ SR +++ + + +DRT+DV I+++R+ + + I TI G Sbjct: 165 LLALVNSQGKVLSRDYIIEHVWAWDKDVYDRTIDVHIKKLRELLKEYGN---CIKTIRGV 221 Query: 62 GYRFCGD 68 GY++ + Sbjct: 222 GYKWECE 228 >UniRef50_B1HT37 Transcriptional regulatory protein srrA (Staphylococcal respiratory response protein A) n=2 Tax=Bacillaceae RepID=B1HT37_LYSSC Length = 216 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTP-DTPEIIATIHGEG 62 F + K+ SR L+ + G + DRT+D +R +R+ + + + T+ G G Sbjct: 146 LFLDYQNKVFSREHLINTVWGYHVSIEDRTIDSHVRNLREKLRKSGFPADDYLQTVWGIG 205 Query: 63 YRF 65 Y++ Sbjct: 206 YKW 208 >UniRef50_D1CTN9 Phosphate regulon two component response regulator PhoB (Fragment) n=1 Tax=Sinorhizobium terangae RepID=D1CTN9_SINTE Length = 162 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H P ++ SR EL+ + G + R VDV I RIRK P I T+ GE Sbjct: 89 LQHLIARPRQVFSRDELIAAVWGYNIHVVPRAVDVHISRIRKALNEFG-EPNYIRTVRGE 147 Query: 62 GYRFCGDL 69 GY D+ Sbjct: 148 GYSIDSDI 155 >UniRef50_C4RMB5 Two-component system response regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RMB5_9ACTO Length = 169 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ +R +LL + G E RTVDV +RR+R +T ++ T++G Sbjct: 98 LHFLAANPRRVFTRPQLLSNVWGYEHAV-ARTVDVHVRRLRAKLG---NTIPMVTTVYGV 153 Query: 62 GYRFCGDLE 70 GYR + Sbjct: 154 GYRLADEAR 162 >UniRef50_Q1NA75 DNA-binding response regulator n=3 Tax=Alphaproteobacteria RepID=Q1NA75_9SPHN Length = 236 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + ++ G++ +R LL+ + P VDV + R+R+ E DTP + T+ G G Sbjct: 166 RYLMDHAGEVVTREMLLRHVWKLSFDPQTNVVDVNVGRLRRKLEEGFDTPVL-ETVWGTG 224 Query: 63 YRFCGDLE 70 YR + Sbjct: 225 YRLIARAD 232 >UniRef50_C1SGQ1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGQ1_9BACT Length = 223 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P ++ +R ++L + G E + RTVD + +RK + I ++ Sbjct: 161 LQLLLKHPKRVFTRNQILNAVWGYESDVYTRTVDTHVSSLRKKLGTRGS---FIKSVPKI 217 Query: 62 GYR 64 GYR Sbjct: 218 GYR 220 >UniRef50_A3W0Y1 DNA-binding response regulator TorR n=2 Tax=Roseovarius RepID=A3W0Y1_9RHOB Length = 233 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 36/70 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG++ R L+ +T R+ P RTVDV IRR+R E P I T HG Sbjct: 164 VLAELLRHPGEVLGRERLMTVITHRQQHPDTRTVDVIIRRLRTKLEEDASAPRFITTAHG 223 Query: 61 EGYRFCGDLE 70 EGY F L+ Sbjct: 224 EGYVFTATLD 233 >UniRef50_C7PP48 Two component transcriptional regulator, winged helix family n=20 Tax=Bacteria RepID=C7PP48_CHIPD Length = 235 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + NP ++ SR E+L+ + G + + + VDV + +RK D P +I T+ G Sbjct: 169 LEYMMRNPKRVLSRMEILENVWGVDFNMNTKVVDVYVNYLRKKVNR-KDQPALIQTVVGM 227 Query: 62 GYRFCGD 68 GY + Sbjct: 228 GYMLKEE 234 >UniRef50_Q631U4 Response regulator n=1 Tax=Bacillus cereus E33L RepID=Q631U4_BACCZ Length = 229 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 + G++ ++ +L +K+ G + + TV I++IR I T+ G GY+ Sbjct: 165 LALHAGQVLTKEQLFEKIWGYDSESDVSTVVEHIKKIRTKLSVYDREYTYIQTVWGIGYK 224 Query: 65 FC 66 + Sbjct: 225 WS 226 >UniRef50_D1VK99 Putative two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VK99_9ACTO Length = 196 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHD----RTVDVTIRRIRKHFESTPDTPEIIA 56 + +PG++ SRA LL+ + G + RTVDV + R+R+ + I Sbjct: 121 VLDFLVRHPGRVYSRAALLRHVWGHRVDDDPGQAGRTVDVLVTRLRRKLGPDNRS--RIE 178 Query: 57 TIHGEGYRFCG 67 T+ GYR+ Sbjct: 179 TVRRVGYRYRP 189 >UniRef50_A6L7N3 Two-component system response regulator n=9 Tax=Bacteroides RepID=A6L7N3_BACV8 Length = 229 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +N G++ SR ++L K+ E+ DRT+DV I R+RK I T G Sbjct: 165 ILLLLLQNKGRVFSREDILAKVWQEEVYVLDRTIDVNITRLRKKIGEYGK---CIVTRLG 221 Query: 61 EGYRFCGD 68 GY F + Sbjct: 222 YGYCFECE 229 >UniRef50_Q188S4 Putative lantibiotic resistance two-component response regulator n=6 Tax=Clostridium difficile RepID=Q188S4_CLOD6 Length = 230 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ SR ++ +K+ G + + TV +++IR F + E I+T+ G Sbjct: 163 IVELLALHAGQVFSREQIYEKVWGCDSEGDSSTVVERVKKIRAKFSAVTPEKEYISTVWG 222 Query: 61 EGYRFCG 67 GY++ Sbjct: 223 IGYKWNK 229 >UniRef50_C4KYM3 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYM3_EXISA Length = 224 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPE--IIATI 58 + F ++P ++ +R +L + + RTVD IR IR+ P + T+ Sbjct: 153 ILKLFLQHPNRLFNRLDLFDLVWPYSAESDPRTVDAHIRMIREKLG-DAGFPIDDYLKTV 211 Query: 59 HGEGYRFCGD 68 G GYR+ + Sbjct: 212 WGRGYRWTEE 221 >UniRef50_B2IER4 Two component transcriptional regulator, winged helix family n=9 Tax=Proteobacteria RepID=B2IER4_BEII9 Length = 277 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG+ +RA LL+ + P VDV I ++RK P ++I ++ G Sbjct: 213 LEYLMRRPGQTVTRAMLLEDVWNYNFLPQTNLVDVHIGKLRKKI-DQPGEVQMIESVRGA 271 Query: 62 GYRFC 66 G+R Sbjct: 272 GFRLN 276 >UniRef50_B1YLJ6 Two component transcriptional regulator, winged helix family n=2 Tax=Exiguobacterium RepID=B1YLJ6_EXIS2 Length = 219 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F E+ G+ +R ++L ++ G RTVD ++++R P + + T+H Sbjct: 155 LVYFFEHMGEALTRDQILDEVWGYTFGGDTRTVDTHVKQLRDKL---PTIKQQLKTVHRV 211 Query: 62 GYRFCG 67 GYR Sbjct: 212 GYRLEA 217 >UniRef50_A9AUH9 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AUH9_HERA2 Length = 229 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P + R LL+ + G R VDV ++R+R + I T+ G Sbjct: 161 VLLQLMRQPSHVWGRLALLQTVWGTNFLGDSRIVDVCVQRLRAKINQLDANADPIQTVRG 220 Query: 61 EGYRFCGD 68 GYR + Sbjct: 221 FGYRLKCE 228 >UniRef50_A5Z504 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5Z504_9FIRM Length = 221 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P KI S+ L + + D T++ I IRK ++ + I TI G Sbjct: 157 ILRLLLQYPQKIFSKQNLYESIWNETYAYDDDTINTHISHIRKKIKAI-TNEDYIQTIWG 215 Query: 61 EGYR 64 GY+ Sbjct: 216 IGYK 219 >UniRef50_A1U3N6 Two component transcriptional regulator, winged helix family n=3 Tax=Gammaproteobacteria RepID=A1U3N6_MARAV Length = 242 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L +N G++ +R LL+++ G + RTVD + R+R+ P+ I TI+ G Sbjct: 161 LFLFQNQGRLLTREMLLERVWGLTRDINTRTVDTHMSRLRRRLGLNPENGFRIKTIYQRG 220 Query: 63 YRFCG 67 YR Sbjct: 221 YRLEA 225 >UniRef50_C6LJU9 Two-component response regulator for energy transfer from phycobilisomes to photosystem n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LJU9_9FIRM Length = 141 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +PG + ++ ++ +++ + + D ++ IR +RK E+ P P+ I T+ G Sbjct: 72 LTYMARHPGWVFTKKQIYEELYEDVQTENIDNSIYCLIRGLRKKIEADPGNPKYIQTVRG 131 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 132 IGYKFTIPEE 141 >UniRef50_C3XKF1 DNA-binding response regulator n=4 Tax=Campylobacterales RepID=C3XKF1_9HELI Length = 222 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK SR L + + R++D IR +R TP+ I ++ G Sbjct: 156 ILNLLFLHKGKPFSRNSLSQAIASIAPDSSLRSIDTHIRNLRAKLGDDAKTPKYIQSVWG 215 Query: 61 EGYRFC 66 GY+FC Sbjct: 216 IGYKFC 221 >UniRef50_A1ULT5 Two component transcriptional regulator, winged helix family n=5 Tax=Corynebacterineae RepID=A1ULT5_MYCSK Length = 247 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ E G++ S E+ + + G TV V +RR+R+ P E I TI G Sbjct: 180 LVYLIERHGRVASSDEISRAVWG--HPADTNTVAVHVRRLREKLGHDPQHGEFIRTIRGA 237 Query: 62 GYRFCG 67 GYR Sbjct: 238 GYRLAP 243 >UniRef50_A3CKZ7 Two-component response transcriptional regulator (CheY-like receiver and winged-helix DNA-binding domains), putative n=7 Tax=Firmicutes RepID=A3CKZ7_STRSV Length = 226 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 30/68 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P KI ++ EL +++ P D T++ + +RK T E I T+ G Sbjct: 159 ILQLLLRHPKKIYTKEELFEQVWEESYLPGDNTLNTHLSNLRKKLAQLDPTEEYIETVWG 218 Query: 61 EGYRFCGD 68 G R D Sbjct: 219 LGVRLKED 226 >UniRef50_P0A5Z7 Transcriptional regulatory protein prrA n=41 Tax=Actinomycetales RepID=PRRA_MYCBO Length = 233 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+ + SRA+LL+ + G + VDV I +R+ E+ P ++ T+ G Sbjct: 168 LAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA-GGGPRLLHTVRGV 226 Query: 62 GYRF 65 G+ Sbjct: 227 GFVL 230 >UniRef50_A5N8U3 Transcriptional regulator n=3 Tax=Clostridium RepID=A5N8U3_CLOK5 Length = 229 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S L + + +D TV + I+ +R+ + + I TI G Sbjct: 161 ILYTLAYNRGRVYSTKILYEMLWKDNFMQNDNTVTMHIKNLREKLGDSVKQGKYIKTIWG 220 Query: 61 EGYR 64 GY+ Sbjct: 221 VGYK 224 >UniRef50_D0Z2F0 DNA-binding response regulator n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2F0_LISDA Length = 249 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P SR L K++ G E DRT+D I +RK TP+ I T+ G+ Sbjct: 180 LWLLASSPDAPLSRDFLTKELRGIEYDGIDRTIDNKIVSLRKKLLDDSSTPQRIITVRGK 239 Query: 62 GYRFCGD 68 GY F D Sbjct: 240 GYLFVPD 246 >UniRef50_C6LFN3 DNA-binding response regulator ResD n=21 Tax=Bacteria RepID=C6LFN3_9FIRM Length = 251 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P KI +R +L+ ++ G + +RTV+ I R+R F D I T+ G Sbjct: 185 LYKLLSYPNKIFTRQQLMDEIWGMFSETDERTVNTHINRLRDKFSDCSDFE--IVTVRGL 242 Query: 62 GYRFCGDLE 70 GY+ ++E Sbjct: 243 GYKAVKNVE 251 >UniRef50_UPI0001C37170 two component transcriptional regulator, winged helix family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37170 Length = 262 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+ R +L ++ G + DR VD I+++RK S I T+ G Sbjct: 199 ILRYLMEHQDWTIDRDTILNRVWGYDYFGSDRVVDSHIKKLRKALGSAGKQ---IKTVVG 255 Query: 61 EGYRFCG 67 GYR Sbjct: 256 RGYRLSK 262 >UniRef50_UPI0001C3717E DNA-binding response regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3717E Length = 225 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP K ++AEL + + D T++V + +R + E I T+ G Sbjct: 160 LELFMKNPKKTYTKAELYESVWNDVYYYEDNTINVHVSNLRNKLKKVSGR-EHIETVWGI 218 Query: 62 GYRFCGD 68 GYR + Sbjct: 219 GYRLRSE 225 >UniRef50_Q2NZ71 Two-component system regulatory protein n=18 Tax=Proteobacteria RepID=Q2NZ71_XANOM Length = 242 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P ++ SR +LL+ GR+ +DR +D I R+R+ E+I T+ E Sbjct: 173 LRTFVEHPQRVLSRDQLLECARGRDTDVYDRAIDSQISRLRRKINER-VHTELIRTVRNE 231 Query: 62 GYRFCGDL 69 GY + Sbjct: 232 GYMLLPSV 239 >UniRef50_C1A710 OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A710_GEMAT Length = 205 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L P K +RA LL+ + G RTVD+ + +R+ E P P I T+ Sbjct: 140 LLALVRQPEKALARATLLRDVWGHAPDIQTRTVDLHVVELRRKLERIPSRPRHIRTVWKT 199 Query: 62 GYRFCG 67 GYRF Sbjct: 200 GYRFDP 205 >UniRef50_B5EH76 Two component transcriptional regulator, winged helix family n=9 Tax=Bacteria RepID=B5EH76_GEOBB Length = 246 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ + +++LK++ G + V IR +R+ E P P I T G Sbjct: 180 LRLLVTHAGRVLTHSQILKQIWGVAYVEQQNVLRVNIRNLRQKIEPDPSRPFYITTEVGV 239 Query: 62 GYRFCGD 68 GYR + Sbjct: 240 GYRLRSE 246 >UniRef50_C6JBE6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBE6_9FIRM Length = 142 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 A+ +PG++ ++A++ + + E + V I +RK E P I T+ G Sbjct: 74 ALCCLATSPGRVFTKAQIFEAVWSLESESCQSNVANVICNLRKKIEPDSGKPTYIKTVLG 133 Query: 61 EGYRFCG 67 GY+F Sbjct: 134 VGYKFAS 140 >UniRef50_D1A718 Putative two component transcriptional regulator, winged helix family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A718_THECD Length = 220 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ +R +LL+ + +RTVDV I ++R I T+ G Sbjct: 159 LCFLMGRPGRVFTREQLLEAAWEPGVSAGNRTVDVHIAQLRAKLGEASP----IRTVRGV 214 Query: 62 GY 63 GY Sbjct: 215 GY 216 >UniRef50_A7GLY2 Two component transcriptional regulator, winged helix family n=9 Tax=Firmicutes RepID=A7GLY2_BACCN Length = 220 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N K+ +R +++++ G E R +D I+ IRK I T+ G Sbjct: 159 ILQLLLKNKRKVITRENIVERVWGYEPYGETRIIDTHIKNIRKKL-----NTPYIKTVKG 213 Query: 61 EGYRFCG 67 GY+ G Sbjct: 214 IGYKIDG 220 >UniRef50_Q6MA20 Putative two-component response regulator phoP n=2 Tax=Parachlamydiaceae RepID=Q6MA20_PARUW Length = 229 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK+ +R +LL + E DR +DV I +RK D I T+ G Sbjct: 164 ILRRLLLNRGKVLTRNQLLDDVQNDEAFIIDRNIDVHIASLRKKLGPNFDG---IETVRG 220 Query: 61 EGYRFCGD 68 GYRF D Sbjct: 221 VGYRFKDD 228 >UniRef50_D1BX45 Two component transcriptional regulator, winged helix family n=26 Tax=Actinomycetales RepID=D1BX45_XYLCX Length = 227 Score = 85.1 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + R L++ + G + +T+D+ + +R+ + P ++T+ G Sbjct: 159 LKVLVANAGSVVVRDTLMRDVWGSDPVGSTKTLDMHVSWLRRKLGDDANAPRYVSTVRGL 218 Query: 62 GYRFCG 67 G+RF Sbjct: 219 GFRFEA 224 >UniRef50_A4X7Q0 Response regulator receiver n=46 Tax=Actinomycetales RepID=A4X7Q0_SALTO Length = 334 Score = 85.1 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 32/62 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E G++ SR EL+ ++ + ++T+DV I +R+ T P ++ T+ G Sbjct: 266 VLTYLAERVGQVVSRRELMTEVWRQARIGEEQTIDVHISWLRRKLGETAAKPRLLHTVRG 325 Query: 61 EG 62 G Sbjct: 326 VG 327 >UniRef50_D1VIP6 Two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VIP6_9ACTO Length = 248 Score = 85.1 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ SRA++L + V+ I +RK ++ P P +I T+ G Sbjct: 184 LRFLLRNAGRAVSRAQILDHVWDYGFDGESTVVETFISSLRKKVDTAP--PTLIHTVRGV 241 Query: 62 GYRFCGD 68 GYR + Sbjct: 242 GYRLSEE 248 >UniRef50_A9BP07 Two component transcriptional regulator, winged helix family n=14 Tax=cellular organisms RepID=A9BP07_DELAS Length = 239 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG+I SR LL + G++ DRTVD ++ +R + + I T G Sbjct: 172 LRCLLERPGRILSREFLLDSIWGQDSDSTDRTVDTHVKTLRAKLRAQAPQQDFITTHRGM 231 Query: 62 GYRFC 66 GY Sbjct: 232 GYSLT 236 >UniRef50_B1HXG4 DNA-binding response regulator n=2 Tax=Bacillaceae RepID=B1HXG4_LYSSC Length = 223 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ +R+ +++++ G + ++T++ ++R+R+ EII T+ G Sbjct: 157 LALLASRPNQVFTRSYIMEQVWGYDYDGDEQTLNTHVKRVRERLNRFDTAVEII-TVRGV 215 Query: 62 GYRFCG 67 GY+ Sbjct: 216 GYKLEA 221 >UniRef50_B6R2K8 Two component transcriptional regulator, winged helix family n=3 Tax=Proteobacteria RepID=B6R2K8_9RHOB Length = 258 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENP + R ELL+ + G + DRTVDV I R+R+ E+ P P + T G+ Sbjct: 185 LEFLIENPNRPIDRVELLEHLGGDLSRYMDRTVDVLILRLRRKIEANPSKPVFLQTRRGK 244 Query: 62 GYRFCGD 68 GY F + Sbjct: 245 GYVFALE 251 >UniRef50_A9D5A2 Osmolarity response regulator n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D5A2_9RHIZ Length = 235 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SRA+L+++ GR+ + DR VDV I R+R+ D +I T+ G Sbjct: 167 LAAMVRSRGRPLSRAQLIERALGRDAEVTDRAVDVQIARLRRALGDRADDAGLIKTVWGV 226 Query: 62 GYRFCGD 68 GY D Sbjct: 227 GYVLVSD 233 >UniRef50_B0RZK9 Two-component response regulator n=2 Tax=Finegoldia magna RepID=B0RZK9_FINM2 Length = 222 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M F NP K+ SR L+ + + RT+D I+ +RK I T+ G Sbjct: 159 IMSLFLNNPTKVFSRENLINSLYNTDFYGSSRTIDSHIKNLRKKLPKD-----FIKTVIG 213 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 214 AGYKLNEE 221 >UniRef50_P31079 Protein petR n=50 Tax=Alphaproteobacteria RepID=PETR_RHOCA Length = 237 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 7/70 (10%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPH------DRTVDVTIRRIRKHFESTPDTPEIIATI 58 F + G++ R EL++++ GR+ DR VDV I R+R+ E P P + T+ Sbjct: 169 FAAHAGEVIGRTELIEEL-GRDRSASAEEAAGDRAVDVQITRLRRKIEPDPREPRYLQTV 227 Query: 59 HGEGYRFCGD 68 G GY D Sbjct: 228 RGLGYMLAPD 237 >UniRef50_B3QUP3 Two component transcriptional regulator, winged helix family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUP3_CHLT3 Length = 227 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N GK+ SR LL+++ G + DRTVDV I ++R+ + I TI G Sbjct: 164 LWILATNKGKVFSREMLLRRVWGENIYVTDRTVDVHICKVRQRLGKFGEDA--IETIKGV 221 Query: 62 GYRF 65 GYR Sbjct: 222 GYRL 225 >UniRef50_A8EX60 Two-component response regulator n=2 Tax=Epsilonproteobacteria RepID=A8EX60_ARCB4 Length = 221 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 L EN KI SR ++L + ++ +RT+D+ I IR P+ I ++ G Sbjct: 156 IFLFLIENQNKISSREQILNA-SSLDINTKNRTIDMHISNIRFKIGDDSKNPKYIKSVWG 214 Query: 61 EGYRFCG 67 GY+F G Sbjct: 215 IGYKFVG 221 >UniRef50_C6D1N2 Two component transcriptional regulator, winged helix family n=3 Tax=Bacillales RepID=C6D1N2_PAESJ Length = 232 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ NP ++ SR LLKK+ RTVD+ I+R+RK +I TI+G Sbjct: 164 LVELACNPDQVYSRKVLLKKVWDIHYAGGTRTVDIHIQRLRKKLGRWHG---LIQTINGI 220 Query: 62 GYRFCGDLED 71 GY+F D Sbjct: 221 GYKFISKPPD 230 >UniRef50_C7R7C9 Two component transcriptional regulator, winged helix family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7C9_KANKD Length = 236 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 33/64 (51%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + F NPG++ SR LLKK+ G + RTVD I +RK D+ I T++ G Sbjct: 164 VLFLRNPGRLYSRKFLLKKVWGIDCDISTRTVDAHISSLRKKLNIKGDSLYRIKTVYQHG 223 Query: 63 YRFC 66 YR Sbjct: 224 YRLE 227 >UniRef50_C9B9W7 Transcriptional regulator n=12 Tax=cellular organisms RepID=C9B9W7_ENTFC Length = 226 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P K+ SRA L + + ++TV++ I +R I T+ G Sbjct: 164 LKLFLEHPKKVFSRANLYETVWQEPYFDSEKTVNMHISNLRGKLAK--AHAVYIHTVWGV 221 Query: 62 GYRFC 66 G+RF Sbjct: 222 GFRFD 226 >UniRef50_C6J108 Multi-component transcriptional regulator n=2 Tax=Bacillales RepID=C6J108_9BACL Length = 248 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 ++ + SR EL+ + G E + R VD I+ IR+ + I T+ G GY+ Sbjct: 178 LAKSEQRAFSREELVNLIWGDEYEGEVRVVDTHIKNIREKTQKAGLGYNPIQTVWGVGYK 237 Query: 65 FCG 67 F G Sbjct: 238 FNG 240 >UniRef50_A6M1X5 Two component transcriptional regulator, winged helix family n=8 Tax=Firmicutes RepID=A6M1X5_CLOB8 Length = 229 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G S++ +L+K+ G + D V+V IR +R II T+ G Sbjct: 165 LSFLLMNNGIALSKSLILEKVWGYDFNGEDNIVEVYIRYLRDKIGD--KDHNIIKTVRGV 222 Query: 62 GYRFCGD 68 GY+ Sbjct: 223 GYKMVAQ 229 >UniRef50_C6LCG6 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LCG6_9FIRM Length = 224 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F ENP +I SR +LL + G + ++R VD I+++RK + +I TI Sbjct: 160 LLFFLENPKRIFSREQLLIRFWGYDFDGNERVVDNHIKKLRKLLGKSGS---MIRTIRKS 216 Query: 62 GYR 64 GYR Sbjct: 217 GYR 219 >UniRef50_A5VEY8 Two component transcriptional regulator, winged helix family n=7 Tax=Proteobacteria RepID=A5VEY8_SPHWW Length = 225 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ +R+ LL+ + P +D + R+R+ + DTP +I T+ G Sbjct: 158 ILEYLVRSAGRVVTRSMLLEHVWDYNFDPQTNIIDQHVSRLRQKLDRGFDTP-LIETVRG 216 Query: 61 EGYR 64 GY Sbjct: 217 TGYV 220 >UniRef50_A7VFQ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7VFQ8_9CLOT Length = 253 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHD-RTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G+ + EL + + + P TV V + R+R+ E P PEII TI+G Sbjct: 188 LFFLVKNRGRSWNLDELYENIWQEKYLPSSSNTVMVHVLRLRQKIEDNPAQPEIIRTIYG 247 Query: 61 EGY 63 +GY Sbjct: 248 KGY 250 >UniRef50_Q0F0D6 Response regulator in two-component regulatory system with PhoR (Or CreC), regulates pho regulon (OmpR family) protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0D6_9PROT Length = 254 Score = 84.8 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PGK +SR LL + G ++ RTVDVT++R+RK + + T+ G Sbjct: 185 LQMLMKKPGKTRSRDYLLDHVWGNDVYVEPRTVDVTVKRLRKALKELGRK-NCVETVRGM 243 Query: 62 GYRFCGDLE 70 GYRF E Sbjct: 244 GYRFLPPSE 252 >UniRef50_Q47744 Regulatory protein vanRB n=13 Tax=Bacteria RepID=VANR_ENTFA Length = 220 Score = 84.8 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +N G+ + +L ++ G + TV I+ +R II TI G Sbjct: 157 ILLLLVQNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRG 211 Query: 61 EGYRFC 66 GYR Sbjct: 212 VGYRLE 217 >UniRef50_B0G6A2 Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A2_9FIRM Length = 85 Score = 84.8 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+PG + S E+ + + E V I ++RK + I T+ G Sbjct: 15 VLKYLTEHPGWVFSHEEIYRNVWKEEPIDCANAVMCCISQLRKKLKVDSRNWNYIRTVRG 74 Query: 61 EGYRFCG 67 GY+F Sbjct: 75 VGYKFQP 81 >UniRef50_B6ITF9 TorCAD operon transcriptional regulatory protein TorR n=1 Tax=Rhodospirillum centenum SW RepID=B6ITF9_RHOCS Length = 241 Score = 84.8 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 40/70 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ +R +L+ ++G + P+DRT+DV + R+R+ T +P +I T G Sbjct: 170 LALLVRSGGRVVTRDQLIDAVSGTDRNPNDRTIDVLVSRLRRKMCDTGVSPRLILTEKGL 229 Query: 62 GYRFCGDLED 71 GYR D+ D Sbjct: 230 GYRLGVDVTD 239 >UniRef50_UPI0001B559F0 two-component system, response regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B559F0 Length = 247 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +AE+L+++ + R VD ++ +R+ P ++ T+ G Sbjct: 173 LACFLAHPERVLEKAEILQRVWRYDFSGDTRIVDTYVKNLRRKL-DHGGAPALLHTVRGV 231 Query: 62 GYRFCGDLED 71 GY ++ Sbjct: 232 GYCLRLPRDE 241 >UniRef50_B8DZ94 Two component transcriptional regulator, winged helix family n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8DZ94_DICTD Length = 224 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N +I S+ +++ + G E V+ I+ +RK E II TI G Sbjct: 159 ILEYLMRNVNRIISKEQIISHVWGYESDTLSNVVEAHIKNLRKKLER-KRDENIIETIRG 217 Query: 61 EGYR 64 GYR Sbjct: 218 MGYR 221 >UniRef50_Q3JG93 Response regulator protein n=61 Tax=Proteobacteria RepID=Q3JG93_BURP1 Length = 288 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L G + SR ++LK++ G E DR+VD I ++R+ FE P I TI G Sbjct: 218 LLILARAAGTVLSRDDILKQLRGIEFDGIDRSVDSGISKLRRRFEDASSEPHKIKTIWGR 277 Query: 62 GYRFCG 67 GY F Sbjct: 278 GYLFSP 283 >UniRef50_C6JLS2 DNA-binding response regulator n=2 Tax=Fusobacterium RepID=C6JLS2_FUSVA Length = 215 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN G +++R +++ + G + DRTVD + R+R+ + + I T+ Sbjct: 152 ILFYLEENIGIVKTREQIISGVWGYDFTGTDRTVDKHLTRLREKLG---NCSKYIKTVKA 208 Query: 61 EGYRFC 66 GY+F Sbjct: 209 IGYKFE 214 >UniRef50_C2Z9H3 DNA-binding response regulator n=4 Tax=Bacillaceae RepID=C2Z9H3_BACCE Length = 226 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+I S+ ++ +K+ G + T+ V I +R T I T+ G Sbjct: 160 ILELLTVNLGQIFSKEQIYEKIWGLDAVGDLNTIIVHINNLRAKLSLGMST-YHIKTVWG 218 Query: 61 EGYRFCG 67 GY+ Sbjct: 219 VGYKLEK 225 >UniRef50_A6BKE3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BKE3_9FIRM Length = 221 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G + ++ +L+ + G + D TV VTI R+RK E+ +P + + G Sbjct: 154 LEYLMYNQGNVLTKENILEYVWGLDGQFVVDNTVSVTINRLRKKIETDAGSPIYLKNVFG 213 Query: 61 EGYRFC 66 GY+ Sbjct: 214 LGYKLE 219 >UniRef50_C8UTJ5 Two-component response regulator n=9 Tax=Lactobacillus RepID=C8UTJ5_LACRG Length = 227 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ +++L + + G D T++V I +R P+ I +I G Sbjct: 163 LALMMRDPHQVFDKSQLYEHVWGEPFLNADNTLNVHISNLRTKINELAHDPKYIISIWGI 222 Query: 62 GYRFC 66 G R Sbjct: 223 GVRLI 227 >UniRef50_B6FMI5 Putative uncharacterized protein n=7 Tax=Clostridiales RepID=B6FMI5_9CLOT Length = 243 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G++ ++ +L+ + G + D TV VTI R+R+ E + I + G Sbjct: 174 LEYLMRNQGQVLTKENILETIWGVDGQFVVDNTVSVTINRLRRKIEPDGERQGYIQNVFG 233 Query: 61 EGYR 64 GYR Sbjct: 234 LGYR 237 >UniRef50_A9DQD6 Probable two-component response regulator protein n=2 Tax=Rhodobacteraceae RepID=A9DQD6_9RHOB Length = 247 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N K SR L+ + G+E P DRT+D + R+RK E P +I T+ G Sbjct: 174 LAAFLKNAKKPLSRDRLMDLIDGQEWAPLDRTIDNQVARLRKKVERDASRPLLIKTVRGI 233 Query: 62 GYRFC 66 GY Sbjct: 234 GYILT 238 >UniRef50_C6J4Z6 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4Z6_9BACL Length = 225 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + GK+ R +L+++ G + VDV IR +RK + +++ TI G Sbjct: 162 LLFLMKRAGKVCGRDLILQQVWGYDFSTGTNVVDVYIRHLRKKIDKGHSR-KLLHTIRGT 220 Query: 62 GYRF 65 GY F Sbjct: 221 GYMF 224 >UniRef50_B8FY05 Two component transcriptional regulator, winged helix family n=13 Tax=Bacteria RepID=B8FY05_DESHD Length = 231 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 N K+ S E+ + + P + T+ V I+ +R+ E P+ I T+ G+ Sbjct: 167 RLLLLNRRKVFSAKEIYEHIWQEPFLPLSNNTIMVHIKNLRRKLEKDVGRPQYIRTVWGK 226 Query: 62 GY 63 GY Sbjct: 227 GY 228 >UniRef50_A5ZPI0 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A5ZPI0_9FIRM Length = 231 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+ G + +R+++L ++ G + DRT+D I+ +RK I T+ G Sbjct: 169 LKLLIEHKGLVLTRSQILDELWGYDYPIIDRTIDTYIKNLRKKLRLN-----CIVTVKGI 223 Query: 62 GYRFC 66 GY++ Sbjct: 224 GYKYE 228 >UniRef50_A9ANV0 Two component transcriptional regulator, winged helix family n=72 Tax=Proteobacteria RepID=A9ANV0_BURM1 Length = 262 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ SR +L+ ++ G E DRT+D I ++R+ P+ I TI + Sbjct: 193 LWVLVCRAGEVVSRDDLMLQLRGVEFDGLDRTIDGRISKLRRKLRDDASNPQRIKTIRSK 252 Query: 62 GYRFCG 67 GY+F Sbjct: 253 GYQFSK 258 >UniRef50_A1VB66 Two component transcriptional regulator, winged helix family n=3 Tax=Desulfovibrio vulgaris RepID=A1VB66_DESVV Length = 242 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L EN G + +R ++K++ G + P +DV I ++R+ E P +I T+ G Sbjct: 173 LLLLMENAGTVVTRNMIVKRVWGYDFMPGSNIIDVQICQLREKTERNGA-PRVIHTMRGV 231 Query: 62 GYRF 65 GY F Sbjct: 232 GYVF 235 >UniRef50_C3WA46 Two-component response regulator n=6 Tax=Fusobacterium RepID=C3WA46_FUSMR Length = 234 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M F N + SR ++++++ G + + D+ VDV I +RK E+ + I T+ G Sbjct: 161 IMYLFLLNKEIVISREKIIEEIWGYDFEGKDKIVDVYINLLRKKIEN--KNEKYIHTVRG 218 Query: 61 EGYRFCGDLED 71 GY +++ Sbjct: 219 FGYILKKIIKN 229 >UniRef50_C3WHY2 Two-component response regulator n=8 Tax=Fusobacterium RepID=C3WHY2_9FUSO Length = 236 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +N G SR +++ + G + ++ VDV I +RK + I TI G Sbjct: 170 ILEYFMKNKGLSCSREKIIIDVWGYDFDGEEKIVDVYINSLRKKIDLDN---RYIHTIRG 226 Query: 61 EGYRF 65 GY F Sbjct: 227 FGYMF 231 >UniRef50_A7HP70 Two component transcriptional regulator, winged helix family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HP70_PARL1 Length = 257 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 41/66 (62%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + G Q+R EL +++ R+ +P+DR++D + ++R+ E PD P +I TI G+ Sbjct: 187 LIELVAHEGNPQTREELCRRVFNRQWQPYDRSLDSIVVKLRRKLEPNPDHPMVIKTIRGK 246 Query: 62 GYRFCG 67 GY F G Sbjct: 247 GYLFTG 252 >UniRef50_C7N3P1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3P1_SLAHD Length = 242 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHD-RTVDVTIRRIRKHFESTPDTPEIIATIH 59 +LH E G+ S +L ++ G TV V IR +RK + I T+ Sbjct: 169 VLLHLAERAGEPVSARDLYERAWGETYDASAGNTVMVHIRHLRKKCADVDSSQTFIDTVW 228 Query: 60 GEGYRFCGD 68 G GYR G Sbjct: 229 GVGYRLHGP 237 >UniRef50_Q3ZVS3 DNA-binding response regulator n=4 Tax=Dehalococcoides RepID=Q3ZVS3_DEHSC Length = 230 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G++ + LL+K+ G E + I +R E P+ P+II T G Sbjct: 163 LALLARNSGQVLTYRMLLEKVWGTEYSGDLNLLKKHIHNLRAKIEVNPEYPKIIVTERGL 222 Query: 62 GYRFC 66 GY Sbjct: 223 GYSLI 227 >UniRef50_Q2W7N7 Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W7N7_MAGSA Length = 90 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 N G+ +R +LL DRT+DV + R+R+ E+ P II T+HG GYR Sbjct: 27 LARNAGRALTRDQLLDLTQHDGEAVIDRTIDVLVGRLRRKIEADSRHPAIILTVHGVGYR 86 Query: 65 FCGD 68 + Sbjct: 87 LVAN 90 >UniRef50_Q3A1Q2 Two component transcriptional regulator, winged helix family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1Q2_PELCD Length = 240 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G I R + +++ G DR++DV++ R+RK I T+ G+ Sbjct: 171 LTLLAGHAGTILDRDTINRRLRGIPYDGIDRSIDVSVSRLRKKLGDQKGHHSRIKTVWGK 230 Query: 62 GYRFCGD 68 GY F D Sbjct: 231 GYLFVPD 237 >UniRef50_Q2JAC4 Two component transcriptional regulator, winged helix family n=90 Tax=cellular organisms RepID=Q2JAC4_FRASC Length = 283 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ +R ++ + VD +R +R+ PD P +I T+ G Sbjct: 187 LHLLMRHPDEVLTRTYIVDHVWDFAFDGTSNIVDQYVRYVRRKI-DIPDGPSLIETVRGV 245 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 246 GYRLRTPAE 254 >UniRef50_C0QDS5 Two-component response regulator (OmpR-like protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDS5_DESAH Length = 226 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 35/64 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 E+P ++ +RA+L++K+ G ++RT+D I+ +RK +II + +G Sbjct: 160 IFSVLLESPNRVFTRAQLIEKVQGYNYDGYERTIDFHIKNLRKKIGVYLPGEKIIQSTYG 219 Query: 61 EGYR 64 GY+ Sbjct: 220 YGYK 223 >UniRef50_C6LDQ2 DNA-binding response regulator YycF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDQ2_9FIRM Length = 228 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F EN G + +R +L + G + RTVD ++++RK + I +++G Sbjct: 161 LVYFIENSGIVLARNNILDAVWGYDYVGDIRTVDTLVKQLRKKL---TEECTYIKSVYGV 217 Query: 62 GYRF 65 GY F Sbjct: 218 GYLF 221 >UniRef50_A9H3V0 Two component Transcriptional regulator n=96 Tax=Proteobacteria RepID=A9H3V0_GLUDA Length = 258 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P ++ +R LL+ + P VDV I ++R+ P +I +I G Sbjct: 192 LEYLMRRPNQVLTRTMLLEDVWNYRFIPQTNLVDVHIGKLRRKI-DDPGAQPLIQSIRGT 250 Query: 62 GYRF 65 G+ Sbjct: 251 GFML 254 >UniRef50_C4WPH5 Two component response regulator n=3 Tax=Rhizobiales RepID=C4WPH5_9RHIZ Length = 314 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++ I SR +L++ + + +DR+VD+ I R+R+ +P++I TI Sbjct: 244 LEAFVKSSQHILSRDQLMEMAGNQAVYGYDRSVDILISRLRRKLNDDSRSPKLILTIRNG 303 Query: 62 GYRFCGDLE 70 GY+F ++E Sbjct: 304 GYQFGHEVE 312 >UniRef50_A9KX94 Two component transcriptional regulator, winged helix family n=7 Tax=Gammaproteobacteria RepID=A9KX94_SHEB9 Length = 235 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +N G I SR ++++++ G +R VD I ++RK P I TI + Sbjct: 167 LITLAKNAGNILSRNDIVEQVKGYYYDGIERGVDNHICQLRKKLGDDARNPFKIKTIRSK 226 Query: 62 GYRFCG 67 GY F Sbjct: 227 GYLFVS 232 >UniRef50_Q893J9 Transcriptional regulatory protein n=1 Tax=Clostridium tetani RepID=Q893J9_CLOTE Length = 159 Score = 84.0 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 3 LHFCENPGKIQSRAELLKK-MTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 L F N K+ SR E+L K + G T+ V I+RIR E PE I T G Sbjct: 89 LIFMTNAKKVMSREEILNKLIEGEGSYFDTNTLSVYIKRIRDKIEEDSSNPEYIKTKRGI 148 Query: 62 GYRFCGDLE 70 GY + ++E Sbjct: 149 GYEWSLEVE 157 >UniRef50_C7QZL8 Putative two component transcriptional regulator, winged helix family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QZL8_JONDD Length = 316 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H G + SR EL + ++ RT+DV +RR+R + I T+ G Sbjct: 241 LAHLVTRAGSVISRQELFASVWRTDVPSDSRTIDVHVRRLRDKLGL----EDHIITVRGA 296 Query: 62 GYRFC 66 GY+F Sbjct: 297 GYKFE 301 >UniRef50_Q99U73 Response regulator arlR n=10 Tax=Firmicutes RepID=ARLR_STAAN Length = 214 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN + R ++L + G + VDV IR +R + ++I T+ G Sbjct: 151 LYLLAENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRD-KMIETVRGV 209 Query: 62 GYR 64 GY Sbjct: 210 GYV 212 >UniRef50_C0D718 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D718_9CLOT Length = 216 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N + SR LL ++ G + RTVD IRR+R I T G Sbjct: 153 LSCFMSNQRMVLSRERLLDRVWGMDFTGDARTVDAHIRRLRGKIGG-----GYIKTRIGM 207 Query: 62 GYR 64 GY Sbjct: 208 GYV 210 >UniRef50_C8WPQ3 Two component transcriptional regulator, winged helix family n=2 Tax=Coriobacteriaceae RepID=C8WPQ3_EGGLE Length = 237 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH---DRTVDVTIRRIRKHFESTPDTPEIIAT 57 + +PGK+ +R+++ + + G E + V +R+IR+ E P P+ + T Sbjct: 166 IVAFLAAHPGKVFTRSQIQEYIWG-ESDADCKPTNNITVFVRKIREKIEENPSEPKYLLT 224 Query: 58 IHGEGYRFCGDLE 70 + GY+ LE Sbjct: 225 VQRVGYKMADTLE 237 >UniRef50_C6I3R1 Two-component system response regulator n=20 Tax=Bacteroidales RepID=C6I3R1_9BACE Length = 229 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G++ SR ++L ++ E+ DRT+DV I R+RK + I T G Sbjct: 165 ILFLLLQNKGRVFSREDILSRIWSDEVYVLDRTIDVNITRLRKKIGTYGKR---IVTRLG 221 Query: 61 EGYRFCGD 68 GY F + Sbjct: 222 YGYCFETE 229 >UniRef50_A6CDX9 Two component transcriptional regulator, winged helix family protein n=2 Tax=Bacteria RepID=A6CDX9_9PLAN Length = 231 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F NPGK+ SR + + T++V ++ +R E+ P +I T+ G Sbjct: 160 LLFFLRNPGKVLSRTRIYDTVWDDSYDGLSNTLEVHVKELRHKLEACG--PRVIQTLRGR 217 Query: 62 GYRFCGDLED 71 GY +D Sbjct: 218 GYVLETTSDD 227 >UniRef50_Q2J4Y7 Two component transcriptional regulator, winged helix family n=3 Tax=Frankia RepID=Q2J4Y7_FRASC Length = 244 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR ELL+++ G + TV +RR+R E P ++ T+ G Sbjct: 180 LAFLARHPRRVFSREELLEQVWGTRFQ-DPATVTEHVRRVRTKVEGRPPQRRLVTTLRGM 238 Query: 62 GYRFCG 67 GYRF Sbjct: 239 GYRFDP 244 >UniRef50_UPI0001973D88 response regulator DrrA n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973D88 Length = 162 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 NP ++ + LL + + + R ++ I +RK PD P+ + +++ Sbjct: 95 IFALLILNPKRVFTYEMLLDLVWHEDYSYYSRKAINNHISNLRKKLRVAPDLPDYVKSVY 154 Query: 60 GEGYRFC 66 G GY+F Sbjct: 155 GVGYKFE 161 >UniRef50_B6GBG2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBG2_9ACTN Length = 278 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P + ++ +L + G D TV V + IR + T I T+ G Sbjct: 213 LEALMRQPKRAWAKQDLFEAAWGEPYAGDDSTVTVHMSNIRTKLKPTGTDA-YIKTVWGI 271 Query: 62 GYRFCGD 68 G++ + Sbjct: 272 GFKLVEE 278 >UniRef50_C9LLT4 DNA-binding response regulator PhoP n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLT4_9FIRM Length = 209 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +N ++ R E+L+K+ G VDV +R +R + + I T+ G Sbjct: 145 LLFLAKNKNRVLKREEVLEKVWGYGYAGKTNIVDVYVRYLRSKIDEKVGK-KYIHTVRGI 203 Query: 62 GYR 64 GY Sbjct: 204 GYV 206 >UniRef50_A9AXT6 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXT6_HERA2 Length = 231 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P K+ + LL+ + G + + + V I R+R+ E+ P P + T G Sbjct: 166 LAYLITHPNKVLTHRMLLQHVWGDQYRDEAEYLRVYIGRLRRKLEADPSNPRHLLTEAGI 225 Query: 62 GYRFCG 67 GYRF Sbjct: 226 GYRFVS 231 >UniRef50_A6TSQ9 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiaceae RepID=A6TSQ9_ALKMQ Length = 236 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 36/64 (56%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+ + SR+ LL+++TG + P R VDV IR IRK D+P+ I TI G Sbjct: 171 ILKKLAESLEHVLSRSLLLEEVTGEKSTPDLRIVDVHIRNIRKKLSDHNDSPKYIETIRG 230 Query: 61 EGYR 64 GY+ Sbjct: 231 VGYK 234 >UniRef50_A6VT30 Two component transcriptional regulator, winged helix family n=26 Tax=Gammaproteobacteria RepID=A6VT30_MARMS Length = 245 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP K SR E+ + + G E DR++D I +RK + P I T+ G+ Sbjct: 173 LWLLASNPEKTVSRDEISQSLRGIEYDGLDRSIDNKIVSLRKKLGDSNGLPRRIITVRGK 232 Query: 62 GYRFCGD 68 GY F D Sbjct: 233 GYLFITD 239 >UniRef50_B7IXR9 DNA-binding response regulator n=167 Tax=Bacilli RepID=B7IXR9_BACC2 Length = 225 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF-ESTPDTPEIIATIHG 60 + F + + SR +L++++ G DRTVD IR +R ++ + T++G Sbjct: 156 LGLFLRHVNYVLSRDQLIERIWGLNTNTEDRTVDSHIRNLRDKLRKANFPIDHHLKTVYG 215 Query: 61 EGYRFC 66 GYR+ Sbjct: 216 VGYRWI 221 >UniRef50_B1WTP9 Two-component response regulator n=12 Tax=Cyanobacteria RepID=B1WTP9_CYAA5 Length = 248 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ R++L+ + G + +R VDV I +IRK ++I T+ G Sbjct: 180 LYFLATHPNRVWERSDLIAAVWGNHHEIGAERKVDVHIGQIRKKINDI--QGKLIKTVRG 237 Query: 61 EGYRFC 66 +GY F Sbjct: 238 KGYLFE 243 >UniRef50_B9JNY4 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNY4_AGRRK Length = 226 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG + +R ++L + G R VDV I R+RK S + +II TI G Sbjct: 162 ILEFLMRNPGTVHTRTDVLTNVWGPHATVDPRVVDVHIGRLRKCI-SNSENDDIIRTIRG 220 Query: 61 EGY 63 GY Sbjct: 221 AGY 223 >UniRef50_A9KSV1 Two component transcriptional regulator, winged helix family n=9 Tax=Firmicutes RepID=A9KSV1_CLOPH Length = 229 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 9/71 (12%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF----ESTPDTPEIIA 56 + +P K+ S+ E+ D+T++V I IR E I Sbjct: 164 ILELLLLHPNKVFSKQEIYNYAWEEYFIGEDKTINVHISNIRMKLKKVTEDD-----YID 218 Query: 57 TIHGEGYRFCG 67 T+ G G++ Sbjct: 219 TVWGIGFKLSK 229 >UniRef50_C3CKG2 Two-component response regulator n=11 Tax=Bacillus cereus group RepID=C3CKG2_BACTU Length = 245 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+F +N K R ELL+++T G + + T+ V I+R+R E P P+ I T G Sbjct: 175 LLNFMKNSHKALKRDELLQQITEGENVFFDENTLSVYIKRLRAKVEDNPQKPQFIVTERG 234 Query: 61 EGYRFCGDL 69 GYR+ D+ Sbjct: 235 YGYRWSKDV 243 >UniRef50_C7Q501 Two component transcriptional regulator, winged helix family n=2 Tax=Actinomycetales RepID=C7Q501_CATAD Length = 242 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + +R +LL ++ G + + VD + +R+ E+ D P ++ T+ G Sbjct: 164 VLEVLVRNAGAVLTRDQLLDRVWGYDFQVRSDAVDTVVSYLRRKLEAD-DRPRVLHTVRG 222 Query: 61 EGYRFCGDLE 70 G+ G LE Sbjct: 223 VGFALRGGLE 232 >UniRef50_C4ZEN6 Two component transcriptional regulator, winged helix family n=11 Tax=Clostridiales RepID=C4ZEN6_EUBR3 Length = 232 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N ++ +R +L ++ D T+ V +RR+R+ E+ P PE + TI G Sbjct: 163 LCLLVRNANRVVTRDIILNELWDDTGNFVDDNTLSVYVRRLREKVETNPSHPEHLITIRG 222 Query: 61 EGYRF 65 GY++ Sbjct: 223 FGYQW 227 >UniRef50_C0MDU1 Response regulator protein n=6 Tax=Streptococcus RepID=C0MDU1_STRS7 Length = 245 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N I S + + G + +++++ V IR IR+ E P P+ + T+ G Sbjct: 179 ILRKLFANINYIVSTETICDTIWGLDSFGYEKSLMVHIRNIREKIEIIPSKPKHLITVKG 238 Query: 61 EGYRFC 66 GY+ Sbjct: 239 LGYKLV 244 >UniRef50_Q44006 Transcriptional activator protein czcR n=330 Tax=cellular organisms RepID=CZCR_RALME Length = 225 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ SR + ++ G VDV IRR+R P ++I T+ G Sbjct: 157 LHLLMRRRGEVLSRTTIASQVWGVNFDTDTNVVDVAIRRLRSKV-DDPFDQKLIHTVRGM 215 Query: 62 GYRFCGD 68 GY + Sbjct: 216 GYVLDPE 222 >UniRef50_D2B5L0 Response regulator receiver protein n=15 Tax=Actinomycetales RepID=D2B5L0_STRRD Length = 238 Score = 83.2 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F NPG + R LL+ + R VD+ ++R+RK + I T+ G Sbjct: 178 LLEFAANPGIVLDRQTLLRDVWDYGWDGDSRVVDLCVQRLRKKIGAD-----RIETVRGF 232 Query: 62 GYRF 65 GY+ Sbjct: 233 GYKL 236 >UniRef50_C7N0P4 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0P4_SLAHD Length = 422 Score = 83.2 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + G++ ++ EL++ G + + V +RRIRK E P P+ + T+ G Sbjct: 354 ILYTLACRAGEVVTQRELVEAAWGEDYTEQMAGLAVYVRRIRKKIEDNPAEPQFLLTVWG 413 Query: 61 EGYRFCG 67 EGY F Sbjct: 414 EGYTFKT 420 >UniRef50_B8FS42 Two component transcriptional regulator, winged helix family n=5 Tax=Clostridiales RepID=B8FS42_DESHD Length = 228 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMT--GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + EN G+ +RA+L+ + G E + + VT+ R+R E P +P I T++ Sbjct: 161 LRLLLENRGQTLTRAQLVDAIWTEGAEY-VDENALSVTVNRLRNKLEDLPSSPRFIKTVY 219 Query: 60 GEGYRFC 66 G GY + Sbjct: 220 GIGYTWA 226 >UniRef50_A4CE30 Probable two-component response regulator transcription regulator protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CE30_9GAMM Length = 227 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 28/66 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK SR +L + G E+ P VDV I ++RK +I T G Sbjct: 159 ILELLMTNTGKYLSRERILSNVWGMEMDPMTNVVDVYIGKLRKKLTIESKGESMIETKRG 218 Query: 61 EGYRFC 66 GYR Sbjct: 219 IGYRLN 224 >UniRef50_UPI0000164CF1 response regulator n=1 Tax=Deinococcus radiodurans R1 RepID=UPI0000164CF1 Length = 243 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ +R EL+ ++ VD +R +R+ E++ T+ G Sbjct: 181 LEVLASHPGRVYTRDELIDRVWDGRFDAESNVVDTYVRNLRRKLGD-----EVVQTMRGV 235 Query: 62 GYRF 65 GY F Sbjct: 236 GYSF 239 >UniRef50_B0S387 Two-component response regulator n=6 Tax=Clostridiales Family XI. Incertae Sedis RepID=B0S387_FINM2 Length = 231 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +N I S +L+ + + ++ T+ I RIR+ E P P+I+ TI G Sbjct: 164 ILSYLADNMNMIVSIDRILENIW-EDSYGYENTLITHIYRIREKLEDNPRDPKILITIKG 222 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 223 LGYKLVKE 230 >UniRef50_A9FLR1 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FLR1_SORC5 Length = 235 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E ++Q+R LL + G ++ RTVD ++R+R D I T+ G Sbjct: 163 LVALYEARERVQTRTALLDGVWGIDVSITTRTVDTHVKRLRDKLRRAGD---YIQTVRGI 219 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 220 GYRFAASPD 228 >UniRef50_Q2JGV9 Response regulator receiver protein n=1 Tax=Frankia sp. CcI3 RepID=Q2JGV9_FRASC Length = 171 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTG----RELKPHDRTVDVTIRRIRKHFESTPDTPEIIA 56 + F +PG+ SR LL + G E P RTVDV + R+R+ P+ + I Sbjct: 96 VLDFFVRHPGQAYSREALLCSVWGHQVDDESAPDIRTVDVLVTRLRRKLG--PEHRDRIE 153 Query: 57 TIHGEGYRFCG 67 TI GYR+ Sbjct: 154 TIRRVGYRYRP 164 >UniRef50_A8F5U3 Two component transcriptional regulator, winged helix family n=1 Tax=Thermotoga lettingae TMO RepID=A8F5U3_THELT Length = 228 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NPG + SR E+++K+ E +DV I +R + I T+ G Sbjct: 163 LELFLRNPGIVFSREEIMEKVWENEKIIKSNVIDVYILYLRNKLKPYGYD-RYIQTVPGY 221 Query: 62 GYRFCGD 68 GYRFC + Sbjct: 222 GYRFCEE 228 >UniRef50_A9BIE2 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=A9BIE2_PETMO Length = 232 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N K+ +R E++ K+ + DR +DV I IR E I TI Sbjct: 158 ILDLLARNSEKVYTREEIIDKIWFGDEFITDRVIDVHISMIRSKIGK-----EWIKTIRN 212 Query: 61 EGYRFCGD 68 GY+F + Sbjct: 213 VGYKFNKN 220 >UniRef50_Q7CXM1 Two component response regulator n=11 Tax=Alphaproteobacteria RepID=Q7CXM1_AGRT5 Length = 237 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ML F G R EL++ E + +RT+DV I R+R+ E P P + T+ G Sbjct: 174 IMLLFALRAGDTIPRHELVEA----ESEVGERTIDVQINRLRRKIEDDPANPVYLQTVRG 229 Query: 61 EGYRFCGD 68 GYR D Sbjct: 230 IGYRLSVD 237 >UniRef50_UPI0001787E68 two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787E68 Length = 239 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L G++ +R ++LK++ + VDV I +R+ +++ TI G Sbjct: 162 LLFLARRQGQVCTREDILKQVWDYDFHTGTNVVDVYILHLREKI-DRGRKQKLLRTIRGA 220 Query: 62 GYRFCGDLE 70 GY+ E Sbjct: 221 GYKLLSQEE 229 >UniRef50_UPI0001AEBEBF two component transcriptional regulator, winged helix family protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBEBF Length = 225 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F EN K+ SR +L ++ P VDV I R+R+ I T+ G Sbjct: 160 LYYFAENAEKVLSRERILSRVWRSHSDPLTNVVDVYISRLRQKL--HSSDAIFIETLRGN 217 Query: 62 GYRFCG 67 GYR Sbjct: 218 GYRLTT 223 >UniRef50_B7QTW7 Two-component response regulator n=1 Tax=Ruegeria sp. R11 RepID=B7QTW7_9RHOB Length = 225 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+IQ+RA LL+++ +P V+ + R+R E P E I TI G Sbjct: 161 LEVLMRSKGRIQTRAMLLERVWDINFEPSTSVVETHMSRLRNKIEK-PFDAEYIRTIRGS 219 Query: 62 GYRFC 66 GY F Sbjct: 220 GYMFI 224 >UniRef50_B9T9H2 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9T9H2_RICCO Length = 104 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG I + ++LL ++ G + + + I R+R E P P+I+ T G Sbjct: 40 LMLLASKPGTIFTHSQLLAQVWGPDYIDDTHYLRIHIGRLRAKLEDQPSAPQILLTELGI 99 Query: 62 GYRFC 66 GYR Sbjct: 100 GYRLA 104 >UniRef50_A6LA64 Two-component system response regulator n=12 Tax=Bacteroidales RepID=A6LA64_PARD8 Length = 228 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G + SR E+L ++ E+ DRT+DV I R+RK I T G Sbjct: 165 ILKLLLENKGNVFSREEILSRIWKDEVYVLDRTIDVNITRLRKKIGPYGKN---IVTRLG 221 Query: 61 EGYRFC 66 GY F Sbjct: 222 FGYCFE 227 >UniRef50_B1ZVS5 Two component transcriptional regulator, winged helix family n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B1ZVS5_OPITP Length = 228 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G+ ++ +L+ + P VDV + R+R + I T+ G Sbjct: 164 LEYLLRHAGRPVTKVMILEHVWDYSFDPQTNVVDVLMSRLRSKIDPDK---TRIETLRGV 220 Query: 62 GYRFCG 67 GY F Sbjct: 221 GYVFKA 226 >UniRef50_C0CLW6 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CLW6_9FIRM Length = 228 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 28/63 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E P KI S+A L + + E D T++V I +R E I T+ G Sbjct: 160 LRLLMEFPDKIFSKANLFQSVWNMEYISEDNTLNVHISNLRSKLRKICPDREFIDTVWGI 219 Query: 62 GYR 64 GYR Sbjct: 220 GYR 222 >UniRef50_D2QX61 Two component transcriptional regulator, winged helix family n=3 Tax=Planctomycetaceae RepID=D2QX61_9PLAN Length = 223 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ +R L + + + + V+V I R+R + P +I T+ G Sbjct: 158 LEFLMRYAGQVVTRKMLCEHLWESDWEGVTNVVEVHINRLRGKIDRGFSEP-LIQTVRGR 216 Query: 62 GYRFCG 67 GY Sbjct: 217 GYVLRT 222 >UniRef50_B1VIL1 Two-component system response regulator n=3 Tax=Corynebacterium RepID=B1VIL1_CORU7 Length = 256 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + S++++L + + V+ + +R+ P +I T+ G Sbjct: 190 LRYLMVNAEVVLSKSKILDHVWNYDFGGDGNVVESYVSYLRRKI--DTKEPRLIHTVRGV 247 Query: 62 GYRFCGD 68 GY Sbjct: 248 GYVLRKP 254 >UniRef50_A5UWJ8 Two component transcriptional regulator, winged helix family n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UWJ8_ROSS1 Length = 231 Score = 82.4 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ ++ LL+ + + P TV V I +R+ T I T+ G Sbjct: 157 ILSYLMRHQGEVITQEMLLEHVWDGTVNPFTNTVRVHINALRRKLRDTIAPYRYIETVVG 216 Query: 61 EGYRF 65 GYR Sbjct: 217 VGYRL 221 >UniRef50_A1WWM5 Response regulator receiver protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WWM5_HALHL Length = 160 Score = 82.4 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ +R EL++ + G RTVD +RR+R+ +I T+ G Sbjct: 88 LHFLAAHRHRVVTRDELIRGVWGPRAYLESRTVDAHVRRLRQALRPAGYD-RMIRTVRGV 146 Query: 62 GY 63 GY Sbjct: 147 GY 148 >UniRef50_P69229 Transcriptional regulatory protein baeR n=214 Tax=Bacteria RepID=BAER_ECOL6 Length = 240 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK+ SR +LL + DRT+D I+ +R+ ES I ++G Sbjct: 169 LKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGV 228 Query: 62 GYRFCGD 68 GYR+ D Sbjct: 229 GYRWEAD 235 >UniRef50_Q3ATG7 Two component transcriptional regulator, winged helix family n=12 Tax=Chlorobiaceae RepID=Q3ATG7_CHLCH Length = 253 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + G+ QSR LL + + RT+D I RIR+ + +I T+ G Sbjct: 183 LVALLKRKGEAQSRETLLSDVWDIDKSISTRTIDTHITRIREKLGNYGA---LIKTVRGL 239 Query: 62 GYRFCGDLED 71 GYR ++ Sbjct: 240 GYRLEPQEDE 249 >UniRef50_Q01RB2 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01RB2_SOLUE Length = 242 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ +R L+ + G E T+DV IR++R E T +++ T+ G Sbjct: 173 ILEILMRSSGRVITRTRLIDAVWGHERDVQSNTLDVFIRQLRTKIEPAGTT-KLLHTVRG 231 Query: 61 EGYRFCGD 68 GY + Sbjct: 232 IGYTLREE 239 >UniRef50_B5HID4 Two-component system response regulator n=3 Tax=Streptomyces RepID=B5HID4_STRPR Length = 285 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+PG + +R +++ ++ RT+DV + +R+ I T+ G Sbjct: 194 LALLAEDPGAVYTRRQIIDQVWDPHFHGPTRTLDVHVATLRRKLGD----ARWIETVRGV 249 Query: 62 GYRFCGDL 69 G+R + Sbjct: 250 GFRLADHV 257 >UniRef50_B9DT80 Response regulator protein n=2 Tax=Streptococcus RepID=B9DT80_STRU0 Length = 227 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P KI +R +LL + G E +R VD ++R+R+ ++ PD I T+ G Sbjct: 161 LYKLMSHPEKIFTRLDLLDDIWGMEEDRDERLVDACVKRLRQKIQNNPDFD--ILTVRGL 218 Query: 62 GYR 64 GY+ Sbjct: 219 GYK 221 >UniRef50_D1AJ61 Two component transcriptional regulator, winged helix family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AJ61_SEBTE Length = 219 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ EN G I+SR ++L + G + + DR VD I++IRK D + T+ Sbjct: 156 ILLYLIENKGVIKSRDDILIHIWGYDSEVFDRVVDNHIKKIRKKLGDYSD---YVKTVVS 212 Query: 61 EGYRFC 66 GY+F Sbjct: 213 IGYKFE 218 >UniRef50_C7ND40 Two component transcriptional regulator, winged helix family n=4 Tax=Fusobacteriaceae RepID=C7ND40_LEPBD Length = 226 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + SR ++L+++ G + +D +D+ I+ +R P + I T+ G Sbjct: 163 LDFLVLNKGIVLSRDKILEEVWGFDYIGNDNILDLYIKYLRDKI-DRPYERKFIQTVRGI 221 Query: 62 GYRF 65 G+ F Sbjct: 222 GFIF 225 >UniRef50_C8NR68 DNA-binding response regulator n=12 Tax=Bacteria RepID=C8NR68_COREF Length = 224 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+I SRA+LL + P VDV IR +RK + E + TI G Sbjct: 165 LETLMRHPGQILSRAQLLNMVWDMSFDPGSNVVDVYIRALRKKIGT-----EKVETIRGS 219 Query: 62 GYRFC 66 GYR Sbjct: 220 GYRLV 224 >UniRef50_Q9F5J0 Sim1 n=2 Tax=Streptomyces antibioticus RepID=Q9F5J0_STRAT Length = 251 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ +R +++ ++ G + RT+ V + IRK PE++ T+ G Sbjct: 180 LALLATDPGRVFTREQIMFEVWGHDGAGDTRTLGVHVTGIRKKL----RMPELVETVRGV 235 Query: 62 GYRFC 66 G+R Sbjct: 236 GFRLA 240 >UniRef50_A7VHB9 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=A7VHB9_9CLOT Length = 236 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + R ++ + G + + RT+D+ I+ +R+ + +I T+ Sbjct: 175 LKLLMINAGIVLRREVIMMDVWGTDYEGESRTLDMHIKTLRQKLGDAGN---MIKTVRNV 231 Query: 62 GYR 64 GY+ Sbjct: 232 GYK 234 >UniRef50_C0Z5X8 Two-component response regulator n=143 Tax=Firmicutes RepID=C0Z5X8_BREBN Length = 251 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F +N ++ R LL + G E VDV +R +R P+ I+T+ G Sbjct: 187 LVTFMKNINRVLPRDVLLDTVWGFEAAVETNVVDVYVRYLRNKI-DFPNEDSYISTVRGI 245 Query: 62 GYR 64 GY Sbjct: 246 GYV 248 >UniRef50_A1VI78 Two component transcriptional regulator, winged helix family n=54 Tax=Bacteria RepID=A1VI78_POLNA Length = 282 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ +R EL ++ DRT+D I+ +R ++ E I T G Sbjct: 211 ILRLLVLRPGRVFTRDELFDQVWTDGSGSLDRTIDAHIKTLRAKLKAVAPHAEPIRTSRG 270 Query: 61 EGY 63 GY Sbjct: 271 SGY 273 >UniRef50_C4Z360 Two-component system, OmpR family, response regulator ResD n=12 Tax=Bacteria RepID=C4Z360_EUBE2 Length = 220 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +N G++ S+ ++L+ + G + + +D T+ I+ IR F P I T+ G Sbjct: 156 ICEFLAKNRGQVFSKEQILEAVFGFDNESNDSTIITHIKNIRAKFADYDYMP--IKTVWG 213 Query: 61 EGYRFC 66 GY++ Sbjct: 214 IGYKWE 219 >UniRef50_Q49XM7 Response regulator arlR n=145 Tax=Bacteria RepID=ARLR_STAS1 Length = 220 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN + R +++ + G + + VDV IR +R + + I T+ G Sbjct: 156 LFLLVENRNHVLQREQIITDVWGYDTEVETNVVDVYIRYLRNKLKPFGKD-KCIETVRGV 214 Query: 62 GYR 64 GY Sbjct: 215 GYV 217 >UniRef50_B7K7W8 Multi-component transcriptional regulator, winged helix family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K7W8_CYAP7 Length = 799 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 36/71 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N +I S++ L++ + + P + V I+ +R+ + +P +I T++G Sbjct: 157 ILELFLRNRNRIFSQSALIEHLWSFDEAPTENAVRTQIKSLRQKLKKAGASPNLIETVYG 216 Query: 61 EGYRFCGDLED 71 GYR ++ D Sbjct: 217 LGYRLNKNVLD 227 >UniRef50_UPI00016B25CE two component transcriptional regulator, winged helix family protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25CE Length = 224 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G+ S+ ++++ + + TV+ I+ +RK + + I T+ G Sbjct: 160 LQYLMKSSGQTLSKEQIMEHVWNFDADILPNTVEAYIKALRKKIDEKYKV-KYIKTVRGI 218 Query: 62 GYRFC 66 GYR Sbjct: 219 GYRLE 223 >UniRef50_C5AL42 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Burkholderia glumae BGR1 RepID=C5AL42_BURGB Length = 229 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 32/62 (51%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 ++ ++PG++ SR LL ++ G RTVD + R+RK + + I+G G Sbjct: 160 VYMFQSPGQLLSRDHLLNRVWGVHADVDTRTVDTHVSRLRKKLQLDGSNGWKVIPIYGYG 219 Query: 63 YR 64 YR Sbjct: 220 YR 221 >UniRef50_A4FNN5 Response regulator, two-component system n=12 Tax=Actinomycetales RepID=A4FNN5_SACEN Length = 237 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPD--TPEIIATIH 59 + ++ G++ +R E+L+++ + +T+D+ I +R+ + + IAT+ Sbjct: 169 LRVLMQHAGQVVTREEILEEVWPEPSRKGSKTLDMHISWLRRKLGDSNGRFDDQRIATVR 228 Query: 60 GEGYRFCGD 68 G G+RF D Sbjct: 229 GVGFRFNAD 237 >UniRef50_O31050 ScnR n=3 Tax=Streptococcus RepID=O31050_STRPY Length = 232 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N I S + + G E +++++ V IR IR+ E TP P + T+ G Sbjct: 166 ILRKLFSNKNYIASTESICDTVWGLESLGYEKSLMVHIRNIREKIEITPSKPNHLITVKG 225 Query: 61 EGYRFC 66 GY+ Sbjct: 226 LGYKLV 231 >UniRef50_Q1ASD3 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD3_RUBXD Length = 241 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+++SR EL K++ G RT+DV IRRIR E + I T G Sbjct: 164 LAALASDPGELKSREELAKEVWGHAGVGSSRTIDVHIRRIRAALEKK-SAYDYIHTARGL 222 Query: 62 GYRFCG 67 GYRF Sbjct: 223 GYRFEP 228 >UniRef50_Q2IGB7 Two component transcriptional regulator, winged helix family n=5 Tax=Cystobacterineae RepID=Q2IGB7_ANADE Length = 227 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 + G++ SR L++ + G+E + + VDV + +R E I ++ G GYR Sbjct: 159 LARHAGEVLSRTRLIETVWGQEFEGNSNVVDVYVGYLRTKLERLGAPGVRIESVRGVGYR 218 Query: 65 FC 66 Sbjct: 219 LV 220 >UniRef50_A0Z5Z4 Two component transcriptional regulator, winged helix family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z5Z4_9GAMM Length = 239 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + ++ SR LL+ + DR +D + RIRK + P + T+ G Sbjct: 169 VLKTMVVHARQVLSREFLLESVHATNWAGSDRNIDNLVSRIRKKISAPGSAPP-VRTVRG 227 Query: 61 EGYRFCGDLE 70 GY F ++E Sbjct: 228 VGYMFALEVE 237 >UniRef50_C8WHB5 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=C8WHB5_EGGLE Length = 223 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L F ++ GK+ +R + + D T+ V ++R+R E P P +I T+ G Sbjct: 157 LLLFAQSRGKLVTREHVRNAIWDSAGEYVSDNTLSVYVKRLRDKVEDDPAEPRLILTVRG 216 Query: 61 EGYR 64 GYR Sbjct: 217 LGYR 220 >UniRef50_C4DJM5 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DJM5_9ACTO Length = 180 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P ++ +R +LL+ + G RTVDV +RR+R P E + T+ G Sbjct: 106 LHFLIARPDRVHTRQQLLEVVWGVGRGDIGQRTVDVHVRRLRAKM---PRLAEALVTVRG 162 Query: 61 EGYRFCG 67 GYRF Sbjct: 163 VGYRFDS 169 >UniRef50_Q3AVF0 Response regulator receiver domain protein (CheY-like) n=2 Tax=Synechococcus RepID=Q3AVF0_SYNS9 Length = 227 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++ G++ SR +LL+++ E V+V +R +R+ E+ + ++ T+ G Sbjct: 158 LLTLLQHQGRVLSRDQLLQQVWQDERASSGNVVEVYVRYLRQKLEAEGEG-RLLHTVRGR 216 Query: 62 GYRFCG 67 GY Sbjct: 217 GYCLGP 222 >UniRef50_D1CC84 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CC84_THET1 Length = 233 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N GK+ + LL ++ G E + + V I R+R+ + P+ P+ I T G Sbjct: 163 ILEQLVQNAGKVMTHQMLLNRVWGPEYTEENEYLRVYIGRLRRKLDPGPNGPKFIVTEQG 222 Query: 61 EGYRFC 66 GYRF Sbjct: 223 VGYRFV 228 >UniRef50_B0G6B9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6B9_9FIRM Length = 133 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 6/69 (8%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVT--IRRIRKHFESTPDTPEIIATI 58 + + +P ++ ++ ++ + + E + +R V ++ +RK E P+ P I TI Sbjct: 68 LFYLALSPNRVFTKEQIYQHIYEDVESEVDNR---VYGLVKNLRKKIEENPEEPHYIETI 124 Query: 59 HGEGYRFCG 67 G GYRF Sbjct: 125 RGVGYRFRA 133 >UniRef50_C4FAP3 Putative uncharacterized protein n=3 Tax=Bacteria RepID=C4FAP3_9ACTN Length = 258 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG++ R + + + G + V +RRIR + + I T+ G Sbjct: 191 IVALLSKRPGQVFDRDAIYEHVWGWDAAGDPSQVREHVRRIRNKLAAAGVAEDPIETVWG 250 Query: 61 EGYRFCG 67 GY++ Sbjct: 251 VGYKWVA 257 >UniRef50_C9ZAU5 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZAU5_STRSW Length = 464 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+PG + SR ++L ++ + +T+DV + +R+ P I T+ G Sbjct: 363 LALLTEDPGAVYSRQQILNRVWDDHYQGPTKTLDVHVATLRRKLGD----PAWIQTLRGV 418 Query: 62 GYRFC 66 G+R Sbjct: 419 GFRLA 423 >UniRef50_D2LS32 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LS32_BACS4 Length = 251 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N GK+ +R EL+K+++G + +R +DV I RIR E + P + T+ Sbjct: 170 LYYLFLNKGKVLTRMELMKELSGESDELDERIIDVFISRIRTKIEPSRKNPIYLKTVRNL 229 Query: 62 GYR 64 GY Sbjct: 230 GYM 232 >UniRef50_A5UQY1 Two component transcriptional regulator, winged helix family n=6 Tax=Chloroflexi (class) RepID=A5UQY1_ROSS1 Length = 227 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 9/70 (12%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF----ESTPDTPEIIAT 57 + + N G+ SR ++L + + + VDV I +R+ E P I T Sbjct: 160 LEYLMRNAGQALSRQQILDHVWSYDHDVQPQMVDVYIAYLRRKLNASGERDP-----IVT 214 Query: 58 IHGEGYRFCG 67 + G GYR Sbjct: 215 VRGVGYRLEA 224 >UniRef50_Q12RS3 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12RS3_SHEDO Length = 678 Score = 82.1 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ C+NP + SR EL+ + + ++ I ++RKH E P+ I T+ Sbjct: 34 LVYLCQNPNRAISRDELINTVW-ENRFVSEAAINRAIGQLRKHIEDDTSHPKYIRTVSKV 92 Query: 62 GYRFCGDLE 70 GYR ++ Sbjct: 93 GYRLDAVVQ 101 >UniRef50_C4Z9T4 Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T4_EUBR3 Length = 145 Score = 82.1 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +N GKI ++ +L+++ + V V I R+RK E+ P I + Sbjct: 78 ILELLAKNQGKIVTKEVILEQVWDIDENFVDTHAVTVVINRLRKKIENNMTEPVYIRNVF 137 Query: 60 GEGYRF 65 G GY F Sbjct: 138 GVGYTF 143 >UniRef50_C8W041 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W041_DESAS Length = 384 Score = 82.1 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +P ++ + +L+++ G V+V I +R+ P +I T+ G Sbjct: 321 LLLFMRHPRQVLPKEIILQQIWGHNFTGDLNIVEVYIGYLRRKL----QKPSLIHTVRGV 376 Query: 62 GYRFC 66 GY F Sbjct: 377 GYLFE 381 >UniRef50_D0SP77 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Acinetobacter junii SH205 RepID=D0SP77_ACIJU Length = 240 Score = 82.1 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P K+ SR +L+ + +RTVD I+ +R+ + + I T G Sbjct: 173 LFLLIQHPEKVFSRQQLMDHIWEHPEHSLERTVDTHIKSLRQKLKQITPDDDPIRTHRGF 232 Query: 62 GYRFCG 67 GY Sbjct: 233 GYSLVK 238 >UniRef50_A9KJT6 Two component transcriptional regulator, winged helix family n=17 Tax=Firmicutes RepID=A9KJT6_CLOPH Length = 228 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K R +L ++ G + DRT+D ++ +R+ + I T+ G Sbjct: 166 LFFLIRNKNKAVPRENILTEVWGFDYCGDDRTLDTHMKLLRRSLGPYAN---FITTLRGL 222 Query: 62 GYRFCG 67 GYRF G Sbjct: 223 GYRFEG 228 >UniRef50_A3ER20 Putative two component transcriptional regulator, winged helix family n=2 Tax=Leptospirillum sp. Group II RepID=A3ER20_9BACT Length = 259 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++ + + R EL+K + G + + ++V I +R+ D+P I T+ G Sbjct: 176 ILVYLVSHEDVVIRREELMKVLWGESWEVDEHNLNVHIWALRRKLGEKSDSPRFIETLRG 235 Query: 61 EGYRFCG 67 GYRF Sbjct: 236 TGYRFRS 242 >UniRef50_A8SYK9 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8SYK9_9FIRM Length = 253 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN GK+ +R LL + G + + DR VD +R++R S I T+ G Sbjct: 189 ILKILLENKGKVITRERLLVDIWGYDYEGSDRCVDNHVRKLRAGIGSAGKQ---IKTVIG 245 Query: 61 EGY 63 +GY Sbjct: 246 KGY 248 >UniRef50_B8I8Q2 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridium RepID=B8I8Q2_CLOCE Length = 231 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 25/68 (36%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S L + + +D +V +R +R I TI G Sbjct: 163 ILRILASNRGRVYSTKMLYEIIWKEPFLENDNSVITHMRNLRDKIGDKVKDSRYIRTIWG 222 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 223 TGYKIEKE 230 >UniRef50_UPI0001C424C1 hypothetical protein BpOF4_12950 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C424C1 Length = 377 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL + G E P DRTVD I R+RK + + I TI G+ Sbjct: 30 LHFLYRHPNQVFSRDKLLDAVWG-EGTPTDRTVDDHIYRVRKKLGTL-KSGIKINTIRGQ 87 Query: 62 GYRFCG 67 GY Sbjct: 88 GYCLIK 93 >UniRef50_D1B9J7 Two component transcriptional regulator, winged helix family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9J7_THEAS Length = 226 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ SR +++ ++ +E VDV I+ +R ++ T+ G Sbjct: 157 ILELLMRYENQVFSRDKIIAQVWQKEYDGTSNVVDVHIKYLRDKLRPFNLD-MMVVTVRG 215 Query: 61 EGYR 64 GY+ Sbjct: 216 VGYK 219 >UniRef50_D1B4X3 Response regulator receiver n=2 Tax=Campylobacteraceae RepID=D1B4X3_SULD5 Length = 223 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G + SR ELL + + + +++DV + RIR+ P P I ++ G Sbjct: 156 IVAYMLKKEGFVISREELLLNIGSIKYESSLKSIDVIMGRIRQKIGDDPKKPRFILSVRG 215 Query: 61 EGYRFC 66 GY+F Sbjct: 216 VGYKFV 221 >UniRef50_B9XE94 Two component transcriptional regulator, winged helix family n=2 Tax=Verrucomicrobiales RepID=B9XE94_9BACT Length = 224 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+I R +L+K+ + P VDV I+R+R+ P+++ T+ Sbjct: 158 LEFLMRTPGRICGRMAILEKVWDYDFDPGTNLVDVYIKRLREKV-DEGFEPKLLHTVRNV 216 Query: 62 GYR 64 GY Sbjct: 217 GYV 219 >UniRef50_A5MZN8 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5MZN8_CLOK5 Length = 224 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S+A+L + + + +D ++ V + IRK + E I TI G Sbjct: 160 ILKIMLRHPKQVFSKAKLYELLWNDIYQGNDNSISVHVSNIRKKISAITSE-EYIKTIWG 218 Query: 61 EGYRFC 66 G+ Sbjct: 219 IGFSLV 224 >UniRef50_Q1CZP3 DNA-binding reponse regulator n=2 Tax=Myxococcales RepID=Q1CZP3_MYXXD Length = 231 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E PG+ +RA++ + + DRTVD I RIRK I T G Sbjct: 163 VLAYLAERPGRALTRAQIAQHALPPSEERDDRTVDSHIARIRKKLGPAGAR---IQTSWG 219 Query: 61 EGYRFCGDLE 70 GYRF D E Sbjct: 220 IGYRFVPDEE 229 >UniRef50_Q2JIE3 DNA-binding response regulator n=12 Tax=Cyanobacteria RepID=Q2JIE3_SYNJB Length = 269 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + G SR ELL++ + + RTVD I +RK E P P +I T+ Sbjct: 161 LMVLVQADGDPVSRLELLERAW-PDSTDNPRTVDTHILSLRKKLERDPRQPSLIHTVRNV 219 Query: 62 GYRF 65 GY F Sbjct: 220 GYCF 223 >UniRef50_A0YP32 Two-component response regulator n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YP32_9CYAN Length = 824 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ ++ +L+ + E +P++ TV I+R+R+ ++ +II T++G Sbjct: 158 LELFLRNPKRVLTQTAILEHLWSFESQPNEHTVRAHIKRLRRKLKTVNAD-KIIETVYGV 216 Query: 62 GYRFCG 67 GYR Sbjct: 217 GYRLKP 222 >UniRef50_B2JBG7 Two component transcriptional regulator, winged helix family n=3 Tax=Cyanobacteria RepID=B2JBG7_NOSP7 Length = 228 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +NP ++ +R+ +L K+ + + TV I +RK + + + I T++G Sbjct: 157 ILECFLKNPTQVLTRSAILDKLWEFDKLSGEETVKTHITNLRKKLRAVGSSEDFIETVYG 216 Query: 61 EGYRFCG 67 GYR C Sbjct: 217 IGYRLCP 223 >UniRef50_A3WKN2 Response regulator (CheY,wHTH domains) n=1 Tax=Idiomarina baltica OS145 RepID=A3WKN2_9GAMM Length = 225 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ S+ +L GR++ P DR++DV I IRK P PE I T+ G Sbjct: 161 ILRCLMQQAGQMVSKDQLSVAALGRKMGPFDRSLDVHISNIRKKL---PANPERIQTVRG 217 Query: 61 EGYRFCGD 68 GYR + Sbjct: 218 RGYRLVNE 225 >UniRef50_B2V1F5 Two component response regulator n=6 Tax=Bacteria RepID=B2V1F5_CLOBA Length = 232 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN + +R +L+K+ E + V I+R+R+ E TP +I T+ G Sbjct: 162 LQFLMENSPNVLTRNTILEKLWDIEGNYIDANALSVYIKRLREKVEYDSRTPTLIETVRG 221 Query: 61 EGYRFCGDL 69 GY++ + Sbjct: 222 VGYKWTPKV 230 >UniRef50_A5EYW4 Transcriptional regulator n=31 Tax=Bacteria RepID=A5EYW4_VIBC3 Length = 224 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F PG I SR +L + G P VDV +RR+RK + P +I T G Sbjct: 158 ILELFLRKPGHIFSRERILANVWGIHQDPLTNVVDVYMRRLRKKIDMPFAQP-LIQTKRG 216 Query: 61 EGY 63 GY Sbjct: 217 MGY 219 >UniRef50_Q1IVX4 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=Q1IVX4_DEIGD Length = 225 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGK+ SR E+ +K+ E VDV I +R+ E + +I T+ G Sbjct: 161 LELLARNPGKVFSRFEIEEKVW-PEYTGGSNVVDVYIGYLRRKLEEGGER-RLIHTVRGV 218 Query: 62 GYRFCGD 68 GY + Sbjct: 219 GYVLREE 225 >UniRef50_B5CLM3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLM3_9FIRM Length = 226 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +N G++ ++ +L+ + G + D +V V + R+RK E+ + P I + G Sbjct: 160 LEYLMKNQGQVLTKENILEHVWGIDGQYVVDNSVSVLVGRLRKKIEAAGERP-YIQNVFG 218 Query: 61 EGYRFCGD 68 GYR + Sbjct: 219 LGYRMEEE 226 >UniRef50_Q1NLC6 Response regulator receiver n=3 Tax=Deltaproteobacteria RepID=Q1NLC6_9DELT Length = 298 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHD--RTVDVTIRRIRKHFESTPDTPEIIATIH 59 + EN + +R E+ K++ R+ K + R +DV I+ +R+ E TP P I T+ Sbjct: 232 LACLMENRNHLVTREEIRKRLW-RDSKIYSWSRVIDVHIQHLRQKVEETPSQPHHIVTVP 290 Query: 60 GEGYRF 65 G GYRF Sbjct: 291 GRGYRF 296 >UniRef50_C4XS15 OmpR family two-component response regulator n=2 Tax=Desulfovibrio RepID=C4XS15_DESMR Length = 223 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NPGK+ S+ +++ + P VDV + R+R + D +++ T+ G Sbjct: 159 LEYFMRNPGKVLSKTMIMEHVWDYHFDPQTNLVDVLVCRLRNKIDRDYDR-KMLHTLRGV 217 Query: 62 GYRF 65 GY Sbjct: 218 GYVL 221 >UniRef50_B1XLL2 Two-component response regulator n=3 Tax=Synechococcus RepID=B1XLL2_SYNP2 Length = 249 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ S +E+LK++ G + T+ V +R +R E P P+ I T++G Sbjct: 166 LHCLLQRHGQTISPSEILKEVWGYDPSDDIETIRVHVRHLRTKLEPEPRRPQYIKTVYGA 225 Query: 62 GYRFC 66 GY Sbjct: 226 GYCLE 230 >UniRef50_C4WAZ7 Two component transcriptional regulator, winged helix family n=2 Tax=Staphylococcus RepID=C4WAZ7_STAWA Length = 238 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M + P K S+ ++ + + G D T++V I IRK + T I T+ G Sbjct: 175 IMKLLMQYPEKAFSKQKIYESIQGI-YLGDDNTINVHISNIRKKI-ALHTTETYIQTVWG 232 Query: 61 EGYRFC 66 G+ Sbjct: 233 IGFMLI 238 >UniRef50_D2MMU4 Response regulator receiver domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MMU4_9FIRM Length = 235 Score = 81.3 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG++ SR +L+ ++ E +DR +D ++ +RK I T+ G Sbjct: 169 LKTLRDSPGRVFSRDQLIDQIFAEEYIANDRIIDAHVKNLRKKLPFD-----YIETVIGL 223 Query: 62 GYRFCGDLE 70 GYR+ + E Sbjct: 224 GYRWRKEDE 232 >UniRef50_C9ZA01 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZA01_STRSW Length = 248 Score = 81.3 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ + E+L ++ + R VD +R +R+ P++I T+ G Sbjct: 175 LVCLLAQPERVVGKKEILSEVWHYDFAGDARIVDTYVRNLRRKI--DRFEPQLIQTVRGV 232 Query: 62 GYRF 65 GY Sbjct: 233 GYCL 236 >UniRef50_UPI0001B518F4 two-component system response regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B518F4 Length = 206 Score = 81.3 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +PG + SR +++ ++ RT+DV + +R+ P I TI Sbjct: 126 LAHLARDPGAVCSRQQIMDQVWDPHFFGPTRTLDVHVAALRRKLGD----PAWIETIRRV 181 Query: 62 GYRF 65 G+R Sbjct: 182 GFRL 185 >UniRef50_A8LWI8 Two component transcriptional regulator, winged helix family n=3 Tax=Actinomycetales RepID=A8LWI8_SALAI Length = 224 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + GK+ +R +LL + E + + TVDV + +R+ + TP + T+ G Sbjct: 155 LTYLAQRAGKVVTRRQLLDHVWRSEGRSLE-TVDVHVTWLRRKLGESASTPRYLHTVRGV 213 Query: 62 GYRFCGDLE 70 G R + Sbjct: 214 GIRLGAPED 222 >UniRef50_A5VAJ0 Two component transcriptional regulator, winged helix family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VAJ0_SPHWW Length = 226 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFEST-PDTPEIIATIHG 60 +L N I +RA LL+K+ G + +P VDV IRR+R + P I+T+ G Sbjct: 162 LLELVRNVDSIVTRAMLLEKVWGYDFEPATNLVDVHIRRLRAKLTANGGGDP--ISTVRG 219 Query: 61 EGYRF 65 GY Sbjct: 220 VGYLL 224 >UniRef50_A8RM86 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RM86_9CLOT Length = 221 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + C N K+ +R E+L + G RTVD+ I+R+RK + I TI Sbjct: 156 LYYLCSNCDKVLTRKEILSDVWGYNYVGETRTVDIHIQRLRKKLDWEGA----IQTITKV 211 Query: 62 GYRFCGDLE 70 GY G + Sbjct: 212 GYLLKGSDD 220 >UniRef50_C5CE19 Two component transcriptional regulator, winged helix family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CE19_KOSOT Length = 228 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NPG + SR ++L K+ +P VDV + +RK + + I T+H Sbjct: 159 LELFMRNPGVVFSREQILDKLWESGFEPRSNIVDVYVLYLRKKLKPFGYDEK-IETVHNI 217 Query: 62 GYRFCGDLE 70 GYR + + Sbjct: 218 GYRLKKEDD 226 >UniRef50_C7RUD8 Two component transcriptional regulator, winged helix family n=16 Tax=Proteobacteria RepID=C7RUD8_9PROT Length = 235 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + NP + + +LLK + G V V + +RK E P P+ + T G Sbjct: 164 LSYLIANPDCVLTHRQLLKNVWGPGHVEDSHYVRVYMGNLRKKIEDDPARPKHLRTEAGV 223 Query: 62 GYRFCG 67 GYRF G Sbjct: 224 GYRFVG 229 >UniRef50_B5ELJ1 Two component transcriptional regulator, winged helix family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELJ1_ACIF5 Length = 226 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + P +I SR LL+ + G E DR++DV + R+RK E P P + T G Sbjct: 159 LLVFAQRPRRILSRDLLLQLLGGEEDGRFDRSIDVRVTRLRKVIEENPRQPRFLQTERGA 218 Query: 62 GYRFCG 67 GYRF Sbjct: 219 GYRFTP 224 >UniRef50_Q6MHZ0 Two component response regulator n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHZ0_BDEBA Length = 224 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP KI + +LK++ + P VDV + R+R E T +I T+ G Sbjct: 159 LDLFMSNPNKIIGKQTILKEVWNYDFDPQTNVVDVLVCRLRNKLEKDFPT-RLIYTVRGV 217 Query: 62 GYRF 65 GY Sbjct: 218 GYVL 221 >UniRef50_B8FQS3 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridiales RepID=B8FQS3_DESHD Length = 226 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN GKI +R LL ++ G + +DR VD I+++R+ + I T+ Sbjct: 162 LKLLMENAGKIVTRETLLARIWGYDFSGNDRVVDNHIKKLRQTLGKGAEQ---IKTVVKS 218 Query: 62 GYRFC 66 GYR Sbjct: 219 GYRLE 223 >UniRef50_Q01ZD3 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZD3_SOLUE Length = 221 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + SRAELL + RT+DV + +R+ E P P I T+ G Sbjct: 157 LRYLIAWRGSVLSRAELLDAVWQYRAT-TTRTLDVHVSLLRQKLEDAPHRPRHILTLRGR 215 Query: 62 GYRF 65 GY F Sbjct: 216 GYFF 219 >UniRef50_Q2BRQ1 Transcriptional regulatory protein CpxR (Fragment) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRQ1_9GAMM Length = 235 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 35/68 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G + + +L + + R+L +DR +DV + R+R+ E+I TI G Sbjct: 166 VLAYLIANAGSVLEKEQLTELVLHRKLAAYDRAIDVHVSRVRQKLAKHLSDAELIKTIRG 225 Query: 61 EGYRFCGD 68 GY+F D Sbjct: 226 VGYQFVKD 233 >UniRef50_C8R030 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R030_9DELT Length = 240 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ SR +L + H RTVDV + R+RK E P P II T+ G Sbjct: 168 LAALATADGRVISREQLSILVARETGGGHQRTVDVLVSRLRKKIEDNPRQPGIILTVTGA 227 Query: 62 GYRFCGD 68 GYR + Sbjct: 228 GYRLEKN 234 >UniRef50_A7ZEI3 Transcriptional activator protein CopR n=9 Tax=Bacteria RepID=A7ZEI3_CAMC1 Length = 219 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+I +R ++ + + + +DV I+ IRK I T G Sbjct: 157 ILEFLMLNKGRILTRDQIKEHVWDFDYTGGSNVIDVLIKNIRKKLGECEA----IQTKRG 212 Query: 61 EGYR 64 GY Sbjct: 213 LGYV 216 >UniRef50_Q39SW2 Two component transcriptional regulator, winged helix family n=20 Tax=Bacteria RepID=Q39SW2_GEOMG Length = 233 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + GK+ + +++L+++ G + V I +R+ E P P I T G Sbjct: 165 LRLLVVHAGKVLTHSQILRQIWGVSHLEQPHVLRVNISNLRRKIEMDPSRPRHILTEPGV 224 Query: 62 GYRFCGD 68 GYR D Sbjct: 225 GYRLRSD 231 >UniRef50_B6BUZ2 Two component transcriptional regulator, winged helix family n=1 Tax=beta proteobacterium KB13 RepID=B6BUZ2_9PROT Length = 233 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C N ++ SR ++ K+ E + RT+DV ++R+R +S I TI G Sbjct: 164 LYLLCMNKNRVLSREIIVDKIWNNESEIDARTIDVHVKRLRSTLKSHGIENS-IETIRGA 222 Query: 62 GYRFCGDL 69 GY+ ++ Sbjct: 223 GYKLSDEI 230 >UniRef50_C4Z758 Two-component system, OmpR family, response regulator n=49 Tax=Bacteria RepID=C4Z758_EUBE2 Length = 236 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P + ++ +L+ ++ G E + T++V I RIR+ F+ PD I T+ G Sbjct: 172 LYKLAASPDRTFTKQQLMDEVWGYETEADPHTIEVHIGRIRERFKDNPDFE--IVTMRGI 229 Query: 62 GYR 64 GY+ Sbjct: 230 GYK 232 >UniRef50_A7BDK1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDK1_9ACTO Length = 143 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H N + +R EL + RTVD IRR+RK PD +I+T+ G Sbjct: 64 LAHLAANADRSVTRDELFASVWADSELGSDSRTVDAHIRRLRKKLSILPD---LISTVRG 120 Query: 61 EGYRFCG 67 EGYRF Sbjct: 121 EGYRFNS 127 >UniRef50_C0QFG8 Two-component DNA-binding response regulator n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFG8_DESAH Length = 233 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + G + +R +++ + G +R+VDVTI +RK D I T+ G Sbjct: 166 VLWFLVTKKGWVFTRGQIVDAVHGENYAVTERSVDVTIAGLRKKLGPCAD---FIETVRG 222 Query: 61 EGYRFCGDLE 70 GYRF + + Sbjct: 223 VGYRFREEAD 232 >UniRef50_B0TXI9 Response regulator receiver protein n=14 Tax=Francisella RepID=B0TXI9_FRAP2 Length = 229 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ ++ S+ +LK++ + P V+V I R+R P+ I TI G Sbjct: 164 VLHLLLKHKNEVVSKTMILKEVWDYDFDPQTNVVEVHISRLRNKLTENG-LPDPIKTIRG 222 Query: 61 EGYR 64 GY Sbjct: 223 FGYV 226 >UniRef50_A9AWE4 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWE4_HERA2 Length = 975 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRT-VDVTIRRIRKHFESTPDTPEIIATIHG 60 + F + G++ + LL+++ G+ DR + IRR+R E P P++I + G Sbjct: 165 LKLFIQYHGQVLTHRMLLQQVWGKSYS-EDRAYLHAYIRRLRAKLEDDPTNPQLIHSESG 223 Query: 61 EGYRF 65 GYRF Sbjct: 224 IGYRF 228 >UniRef50_A8W7F8 Putative regulator n=1 Tax=Streptomyces refuineus subsp. thermotolerans RepID=A8W7F8_9ACTO Length = 273 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 10/73 (13%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHD------RTVDVTIRRIRKHFESTPDTPEII 55 + P K+ SRAELL+++ + + RT+D + +RK +P+ I Sbjct: 165 LHLLAAEPDKLFSRAELLRRVWDYDDVSAEVTSLASRTIDTHVSSLRKKLG----SPDWI 220 Query: 56 ATIHGEGYRFCGD 68 T+ G G+RF G+ Sbjct: 221 ITVRGVGFRFNGE 233 >UniRef50_B1ZTF3 Two component transcriptional regulator, winged helix family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTF3_OPITP Length = 269 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 29/65 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ SR LL+ + G P R+VD + R+R+ T P I ++ G Sbjct: 187 LDLLVHARGRAVSRERLLRAIWGNVNPPASRSVDTHVWRLRRKIGDTGHEPHWIKSVPGV 246 Query: 62 GYRFC 66 GY+ Sbjct: 247 GYQLE 251 >UniRef50_D1CB22 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=D1CB22_THET1 Length = 238 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + + G++ +L++ + G + D V I +R+ E P P+ I T+ G G Sbjct: 174 RYMVMHQGEVLPTEDLMRNVWGYSVAADDSLVKTHIYYLRQRIEEDPAHPKHILTVPGVG 233 Query: 63 YRFCG 67 Y F Sbjct: 234 YLFQP 238 >UniRef50_D0MIF5 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MIF5_RHOM4 Length = 231 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR + +++ G D T+DVT+ +R+ + I T+ G Sbjct: 159 LRFLARHPGEVLSRTRIAEQVWGDPFYVSDNTIDVTVSGLRQKLSEATPALQ-IETVRGV 217 Query: 62 GY 63 GY Sbjct: 218 GY 219 >UniRef50_B8IIA6 Two component transcriptional regulator, winged helix family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IIA6_METNO Length = 238 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ F P ++ SR +L G E DR++D+ I R+R+ E T P +I T+ G Sbjct: 170 LIAFATRPNRVLSRQQLRTMAQGYRESDHSDRSIDIRITRLRRKIE-TGTKPALIQTVRG 228 Query: 61 EGYRFCGD 68 EGY F Sbjct: 229 EGYVFVPQ 236 >UniRef50_C7Q2J4 Two component transcriptional regulator, winged helix family n=5 Tax=Actinomycetales RepID=C7Q2J4_CATAD Length = 254 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + +R ++L+ + G + +P ++DV + +RK E D P ++ T+ G Sbjct: 184 LEMFLSHPRQALTREQILRAVWGFDFEPASNSLDVYVMYVRKKTEFD-DLPRLVQTVRGV 242 Query: 62 GY 63 GY Sbjct: 243 GY 244 >UniRef50_A4XD98 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XD98_SALTO Length = 228 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H PG++ +R ELL + G + RTVDV + ++R +I T G Sbjct: 167 LAHLMARPGRVFTREELLAGVWGYAVPAGTRTVDVHVAQVRAKLGPES----VIRTHRGV 222 Query: 62 GY 63 GY Sbjct: 223 GY 224 >UniRef50_B7GFY6 DNA-binding response regulator, OmpR family (REC-wHTH domains) n=16 Tax=Firmicutes RepID=B7GFY6_ANOFW Length = 226 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ +R +L ++ G + +T+D T++ +RK + ++I T+ G Sbjct: 163 LDLLLQNRGRVLTRDIILDRIWGYDADVSMKTIDATVKLLRKKIGD--EQQQLIKTVRGV 220 Query: 62 GY 63 GY Sbjct: 221 GY 222 >UniRef50_Q0I8A9 DNA-binding response regulator n=13 Tax=Cyanobacteria RepID=Q0I8A9_SYNS3 Length = 250 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + GK+ R+E++K + G + D +DV IR +R+ E D P +I T+ G Sbjct: 179 LCFLMRGNGKVLERSEIMKGVWGEDFYGDDNLLDVYIRYLRQKVE-NKDLPSLIHTVRGV 237 Query: 62 GYRFCGD 68 G+ + Sbjct: 238 GFILRDE 244 >UniRef50_Q1J2L1 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=Q1J2L1_DEIGD Length = 248 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 F PG++ +R ELL+++ E +RT+DV +R +R E+ P P +I T+ G GY Sbjct: 182 AFLRAPGRVFTRLELLEQL-QEEALGSERTIDVHVRNLRAKIEAEPGKPRLIETVFGVGY 240 Query: 64 RFCGDL 69 R DL Sbjct: 241 RLNPDL 246 >UniRef50_B0AAH6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAH6_9CLOT Length = 224 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P I +R +LL ++ G E +RTVDV I+RIR+ + + I T+ G Sbjct: 159 LFKLVSSPDTIFTRRQLLDEIWGMESMADERTVDVHIKRIRERYRA--SNDFEIVTVRGL 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_Q98AP0 Phosphate regulatory protein n=2 Tax=Mesorhizobium loti RepID=Q98AP0_RHILO Length = 234 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H E PGK+ SR EL+ + RTVDV I R+R+ E+ T +I T+ Sbjct: 166 VLRHLLEAPGKVFSRDELIGGAWPANIHVGVRTVDVHISRLRRALEA-ASTGIVIRTVRS 224 Query: 61 EGYRFCG 67 GY Sbjct: 225 AGYSLEK 231 >UniRef50_D0KHV6 Two component transcriptional regulator, winged helix family n=6 Tax=Gammaproteobacteria RepID=D0KHV6_PECWW Length = 242 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ ENPG+ +R LL+++ G P +DV + ++R + P +I T+ Sbjct: 165 LIILMENPGQAITRTMLLERVWGYNFDPQTNLIDVHMSKLRAKIDKGFPRP-LIKTLRAM 223 Query: 62 GY 63 GY Sbjct: 224 GY 225 >UniRef50_Q47PT2 Similar to Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Thermobifida fusca YX RepID=Q47PT2_THEFY Length = 206 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H PG++ +R ELL ++ E R+VDV + RIR+ + E + T+ Sbjct: 143 LAHLASAPGRVFTRQELLDQVWDPEAHTTARSVDVHVHRIRRKLGALG---ERLVTVRRV 199 Query: 62 GYRFCG 67 GY + Sbjct: 200 GYVYRP 205 >UniRef50_C4DQ28 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQ28_9ACTO Length = 256 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K+ SRA+LL+++ G E V+ I +R+ P +I T+ G Sbjct: 190 LTQLIRNVDKVLSRADLLRQVWGMEFDSDTSLVETYISYLRRKL--DNREPRLIRTVRGV 247 Query: 62 GYRFCGDLE 70 GY E Sbjct: 248 GYVLRRPRE 256 >UniRef50_C0QZY4 OmpR n=2 Tax=Brachyspira RepID=C0QZY4_BRAHW Length = 228 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN + R +L+++ G + RT+D+ I+ IR+ + T + I T+ G Sbjct: 164 LKLLMENANNVVDRETMLEEVWGVDHTMETRTIDMHIKSIRQKLDLTKEN---IITVRGM 220 Query: 62 GYRFC 66 GY+ Sbjct: 221 GYKLT 225 >UniRef50_D2BK97 Two-component system, response regulator n=5 Tax=Lactococcus lactis RepID=D2BK97_LACLK Length = 236 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GKI SR ELL+ G RT+DV I +IRK I T G Sbjct: 172 ILELLAKREGKIVSREELLQHFWGISDTAETRTIDVLISKIRKKL-----NNHYIKTKRG 226 Query: 61 EGYRFC 66 GY F Sbjct: 227 FGYYFE 232 >UniRef50_C5NUZ8 Response regulator ArlR n=4 Tax=Bacteria RepID=C5NUZ8_9BACL Length = 223 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +N I SR ++L + + VDV I+ IRK II T G Sbjct: 157 VLEYLMKNKESILSRDQILNHVWDYDYDGASNIVDVIIKNIRKKL-DNGTDKTIIYTKRG 215 Query: 61 EGYRFCGD 68 GY F + Sbjct: 216 LGY-FVKE 222 >UniRef50_C6E2L1 Two component transcriptional regulator, winged helix family n=3 Tax=Geobacter RepID=C6E2L1_GEOSM Length = 234 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F G+ R +L+ + G RT+D I R+RK+FE P P T+ G Sbjct: 167 LSLFFHREGEAIPRGVILESVWGYSTDAETRTLDNFIVRLRKYFEPEPSRPIFFQTVRGV 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFS 231 >UniRef50_B2TRC2 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TRC2_CLOBB Length = 221 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F N ++ +R LL+ + E RTVD I R+R E + TI G Sbjct: 158 LIYFINNVNRVINRETLLRVIWKEEYLGDTRTVDTHINRLRNKLEYYAVD---LRTIRGF 214 Query: 62 GYRFCGD 68 GY+ + Sbjct: 215 GYKLGEE 221 >UniRef50_Q5WC24 Two-component response regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WC24_BACSK Length = 224 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M NP +I S+ L + + G E TV IR IR +I T+ G Sbjct: 159 IMEMLMSNPRQIFSKDHLYETIWGVEATGQSHTVTEHIRNIRIRIHKIDPMANLIHTVWG 218 Query: 61 EGYRFC 66 GY+ Sbjct: 219 VGYKLE 224 >UniRef50_A3Q549 Two component transcriptional regulator, winged helix family n=1 Tax=Mycobacterium sp. JLS RepID=A3Q549_MYCSJ Length = 246 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG + + ++L + G + V I +R+ P P ++ + G Sbjct: 180 ILATLAQRPGAVTTLQQMLDAVWGPRWAGSTAKLHVHIGNLRRKLGDNPARPLLVLNVRG 239 Query: 61 EGYRFC 66 GYR Sbjct: 240 IGYRLA 245 >UniRef50_D0IV51 Response regulator receiver protein n=2 Tax=Comamonas testosteroni RepID=D0IV51_COMTE Length = 134 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + P +I SR +++ + DR +DV + R+R+ E++ P ++ T G Sbjct: 64 LLALLKRPRQIMSREQIMDLTQAED-DVFDRAIDVQMLRLRRKVEASSRAPTLLKTKRGA 122 Query: 62 GYRFCGDLE 70 GY D++ Sbjct: 123 GYFLDADVQ 131 >UniRef50_C6Q063 Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q063_9CLOT Length = 367 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G + S+ +L+K+ G + V+V IR +R II T+ G Sbjct: 304 LKYLLFNNGLVLSKPTILEKVWGFDFNGDVNIVEVYIRYLRDKIGDN--EHSIIRTVRGV 361 Query: 62 GYR 64 GY+ Sbjct: 362 GYK 364 >UniRef50_C4ZI38 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=8 Tax=Bacteria RepID=C4ZI38_EUBR3 Length = 226 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + +R +++ + + + RTVD+ I+ +R I T+ Sbjct: 165 LRLLMGSQGIVMTREVIMRSVWDTDFEGETRTVDMHIKTLRHKLGDYGSR---IKTVRNV 221 Query: 62 GYR 64 GY Sbjct: 222 GYV 224 >UniRef50_Q0BQV4 Two-component response regulator n=10 Tax=Alphaproteobacteria RepID=Q0BQV4_GRABC Length = 253 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 35/69 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F EN ++ R LL+ R DR++DV + R+R+ + +I TI G Sbjct: 183 LLSFLENAQRVIGRDRLLELSRTRLGDVSDRSIDVLVSRLRRKIGNRVGERPLIRTIRGV 242 Query: 62 GYRFCGDLE 70 GY F D+E Sbjct: 243 GYMFAADVE 251 >UniRef50_C8WPK8 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WPK8_EGGLE Length = 236 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++PG++ R + +++ G E + + V IRRIRK + P+ + T+ G Sbjct: 170 IVAFLSKHPGQVFDRDRIHERVGGWENESDSQVVTEHIRRIRKKLAAAGAEPDPVETVWG 229 Query: 61 EGYRFCG 67 GYR+ Sbjct: 230 MGYRWRA 236 >UniRef50_B4CUK8 Two component transcriptional regulator, winged helix family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUK8_9BACT Length = 241 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E P +Q+R +LL ++ G E +R+VD +RR+R + I T++G Sbjct: 179 LATLAERPNVVQTRDKLLTEVWGNENAIENRSVDTYLRRLRNKLGEAG---QHIKTVYGF 235 Query: 62 GYR 64 GYR Sbjct: 236 GYR 238 >UniRef50_C6WFU1 Putative two component transcriptional regulator, winged helix family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WFU1_ACTMD Length = 166 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L CE+P ++ R EL+ ++ G + RTVDV +RR+R +IAT+ G Sbjct: 84 LLFLCEHPDRVHGRRELITRVWGGDGSRGTRTVDVHVRRLRHKLG---SAAGVIATVRGA 140 Query: 62 GY 63 GY Sbjct: 141 GY 142 >UniRef50_C1FSZ1 Regulatory protein VanR n=16 Tax=Firmicutes RepID=C1FSZ1_CLOBJ Length = 228 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP + +R LL+K+ + + T+ I RIR E+ + + I T++G Sbjct: 160 LKILVKNPKIVLTRQMLLEKIWDVDENFVDEHTLTTVISRIRNKIEA--EETQYIKTVYG 217 Query: 61 EGYRFCGDLE 70 GY + GD Sbjct: 218 MGYMWIGDDR 227 >UniRef50_B7RXJ1 Response regulator receiver domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXJ1_9GAMM Length = 219 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ++ ++ R LL ++ R P+DR++DV + ++RK + + E I TI G Sbjct: 149 ILLALLKSNNRVLPRDFLLNAISSRNWTPYDRSIDVLVGKLRKKLQC--ENGEYIKTIRG 206 Query: 61 EGYRFCGDL 69 +GY+FC + Sbjct: 207 QGYKFCSAV 215 >UniRef50_B2TMQ5 Regulatory protein VanR n=5 Tax=Clostridium RepID=B2TMQ5_CLOBB Length = 229 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ +R LL+K+ + + T+ V I R+R E+ + + I TI+G Sbjct: 159 LKILISNKGQVLTRQVLLEKLWDCDRNFVDEHTLTVNINRLRNKIET--ENVKYIKTIYG 216 Query: 61 EGYRFCG 67 GY + G Sbjct: 217 MGYMWVG 223 >UniRef50_A3PUD7 Two component transcriptional regulator, winged helix family n=6 Tax=Mycobacterium RepID=A3PUD7_MYCSJ Length = 237 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + + +R ELLK++ + TV V ++R+R + T+ G Sbjct: 163 LLFFITHADTVFTREELLKQVWRWDF-GDLSTVTVHVKRLRSKLGDQHR----VQTVWGR 217 Query: 62 GYRFC 66 GY + Sbjct: 218 GYMWS 222 >UniRef50_D2M1X4 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1X4_BACS4 Length = 225 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + SR L+K + E + T+ V + R+RK S P + I T+ G Sbjct: 160 ILAVLIRNRGNVVSRTRLMKALWDDESFVDENTLTVNVNRLRKKLASLPSDDDFIKTVKG 219 Query: 61 EGYRF 65 EGYR Sbjct: 220 EGYRL 224 >UniRef50_A6W7C9 Two component transcriptional regulator, winged helix family n=37 Tax=Actinobacteridae RepID=A6W7C9_KINRD Length = 254 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E+P + +R +LL+++ RTVD ++ +R+ + ++ T+HG Sbjct: 187 LVCLAESPRTVLTREKLLEEVWDWADASGTRTVDSHVKALRRKLGAD-----LVRTVHGV 241 Query: 62 GYRFCG 67 GY F Sbjct: 242 GYAFEP 247 >UniRef50_Q82BP8 Putative two-component system response regulator n=1 Tax=Streptomyces avermitilis RepID=Q82BP8_STRAW Length = 282 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+PG + SR ++L ++ + +T+DV + +R+ P I T+ G Sbjct: 206 LALLTEDPGAVYSRQQILDRVWDPHYQGPTKTLDVHVATLRRKLG----HPAWIQTLRGV 261 Query: 62 GYRFCGDLE 70 G+R E Sbjct: 262 GFRLAVHTE 270 >UniRef50_B1IAB9 VncR, response regulator n=69 Tax=Firmicutes RepID=B1IAB9_STRPI Length = 218 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + +N G+ +R++++ + + P DR +DV I+ +RK + I T+ Sbjct: 155 ILDYLVKNEGRALTRSQIIDAVWKATDEVPFDRVIDVYIKELRKKLDLD-----CILTVR 209 Query: 60 GEGYRFC 66 GY+ Sbjct: 210 NVGYKLE 216 >UniRef50_C8NZD2 DNA-binding response regulator n=3 Tax=Erysipelotrichaceae RepID=C8NZD2_ERYRH Length = 224 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N + +R ++L ++ + R VDV I ++R E + I ++ G Sbjct: 161 LIYLLQNENIVLTRDQILSEIWHFDYDGDTRIVDVHIFKLRTKLED---SNVKINSLRGV 217 Query: 62 GYR 64 GY Sbjct: 218 GYV 220 >UniRef50_A5Z890 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z890_9FIRM Length = 227 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ CEN + R +L + G + RTVD ++++RK P I +++G Sbjct: 164 LVYMCENEKVVLKRENILDAVWGFDYDGDMRTVDTLVKQLRKKMTD--KYP-YITSVYGV 220 Query: 62 GYRFC 66 GY+F Sbjct: 221 GYKFE 225 >UniRef50_C6LEF6 Phosphate regulon response regulator PhoB n=3 Tax=Clostridiales RepID=C6LEF6_9FIRM Length = 221 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + SR ELL+ + G + + RT+DV I RIRK +I T+ Sbjct: 158 LMLLVKYKNIAISREELLRSLWGVDFEGETRTIDVHIARIRKKL--DFSD--VIKTVPRI 213 Query: 62 GYRFC 66 GYR Sbjct: 214 GYRLE 218 >UniRef50_C6QH06 Two component transcriptional regulator, winged helix family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QH06_9RHIZ Length = 242 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 35/69 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F P + +R E++ + G + P DR++D + R+R+ ++ T I +I G Sbjct: 170 LEMFARRPHRALTRDEIMDILKGHDYSPLDRSIDALVSRVRRKIDNGSSTSPKIKSIRGI 229 Query: 62 GYRFCGDLE 70 GY F D+ Sbjct: 230 GYMFASDVR 238 >UniRef50_C0YVQ4 Response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YVQ4_9FLAO Length = 224 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 EN K+ SR ++L + G + VDV I IR +II T+ G GY Sbjct: 163 FLMENKNKVLSRTQILHNVWGIDFDNTTNVVDVYISYIRNKI--DETEQKIIHTVKGTGY 220 >UniRef50_A8LCN3 Two component transcriptional regulator, winged helix family n=3 Tax=Bacteria RepID=A8LCN3_FRASN Length = 259 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG + +R LL + G + RTVDV + ++R P +P I T+ G Sbjct: 198 LAALLRRPGLVHTRDRLLADVWGYQASAGTRTVDVHVAQVRAKLG--PASP--IRTVRGV 253 Query: 62 GY 63 GY Sbjct: 254 GY 255 >UniRef50_C2BEN4 Possible response regulator n=3 Tax=Anaerococcus RepID=C2BEN4_9FIRM Length = 215 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + EN R +L + G + + +D T+ VTI+R+R I T+ Sbjct: 150 ILEMLLENQNINLLRDRILDYVWGYDFYEVNDNTLTVTIKRLRSKLGDYGSH---IKTLR 206 Query: 60 GEGYRFCGD 68 G GYR+ + Sbjct: 207 GIGYRWDNE 215 >UniRef50_Q2BDB2 Two-component response regulator n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BDB2_9BACI Length = 226 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF-ESTPDTPEIIATIHG 60 + ++P ++ +R +LL RTVD +R +R+ ++ E +AT+ G Sbjct: 159 LETLMKHPERVYTRDQLLAVAWDINASTEIRTVDSHVRNLREKLKGASFPIEEHLATVWG 218 Query: 61 EGYRF 65 GY++ Sbjct: 219 IGYQW 223 >UniRef50_C7LY45 Two component transcriptional regulator, winged helix family n=2 Tax=Actinobacteria (class) RepID=C7LY45_ACIFD Length = 236 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + + +++ + + + V+V I +RK P + I TI G Sbjct: 158 LELLLRNKGHVLRKQDIIAHVWDYDFEGDSNIVEVYIGYLRKKI-DVPFGTKAITTIRGV 216 Query: 62 GYRFCGD 68 GYR D Sbjct: 217 GYRLEED 223 >UniRef50_B4DAQ3 Two component transcriptional regulator, winged helix family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAQ3_9BACT Length = 230 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ ++ +LL+++ P VDV + R+R ++I T+ G Sbjct: 165 LELLVRNRGRALTKMQLLERLWDYSFDPQTNVVDVLVCRLRNKL-DRGFDTKLIHTLRGI 223 Query: 62 GYRFCGD 68 GY F + Sbjct: 224 GYVFRPE 230 >UniRef50_P76340 Probable transcriptional regulatory protein yedW n=131 Tax=Proteobacteria RepID=YEDW_ECOLI Length = 223 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+I R + ++ G TVDV IRR+R P ++IATI G Sbjct: 156 LWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKV-DDPFPEKLIATIRGM 214 Query: 62 GYRFCG 67 GY F Sbjct: 215 GYSFVA 220 >UniRef50_A8LHM5 Two component transcriptional regulator, winged helix family n=11 Tax=Actinobacteria (class) RepID=A8LHM5_FRASN Length = 270 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NP ++ SRA++L + R+ VD + +R+ P +I T G Sbjct: 184 LRYFLHNPNRVLSRAQILAAVWDRDFDGEPTVVDQYVSYLRRKLGQHG--PPLIHTQRGF 241 Query: 62 GY 63 GY Sbjct: 242 GY 243 >UniRef50_Q1QYP1 Two component transcriptional regulator, winged helix family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYP1_CHRSD Length = 230 Score = 79.4 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 35/66 (53%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F +NPG++ +R+ LL+++ G + RTVD I +R+ + + +++ +G Sbjct: 163 ALFLQNPGQLFTRSYLLERIWGVSGALNTRTVDTHISGLRRKLKLDGQHNYRLKSVYQQG 222 Query: 63 YRFCGD 68 YR + Sbjct: 223 YRLEAN 228 >UniRef50_O66657 Transcriptional regulator (PhoB-like) n=2 Tax=Aquificaceae RepID=O66657_AQUAE Length = 228 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G+ SR+ L++K+ E + +R +DV ++ IR +I T+ G Sbjct: 165 ILKTLMENFGRPVSRSSLVEKLWDYERETTERAIDVHVKHIRDKLGKYKG---LIKTVRG 221 Query: 61 EGYRFC 66 GY+F Sbjct: 222 VGYKFE 227 >UniRef50_B2IFK7 Two component transcriptional regulator, winged helix family n=89 Tax=Alphaproteobacteria RepID=B2IFK7_BEII9 Length = 273 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G+I SR L G + ++RTVDV + R+R+ E P + T G Sbjct: 210 LRLLAENAGEIVSREALA----GLGIGGNERTVDVQVNRLRRKIERDLANPLHLQTARGA 265 Query: 62 GYRFCGD 68 GYR D Sbjct: 266 GYRLLVD 272 >UniRef50_C8WG99 Two component transcriptional regulator, winged helix family n=29 Tax=Bacteria RepID=C8WG99_EGGLE Length = 220 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 +PG+ SR ++++ + G + + T+ V + R ++ P I T+ G GY Sbjct: 159 FLARHPGQAFSRDQIVENVLGWDAESAASTISVHVANARAKLKAAGAEP--IDTVWGVGY 216 Query: 64 RFCG 67 ++ Sbjct: 217 KWTA 220 >UniRef50_B1BBC0 Regulatory protein VanR n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BBC0_CLOBO Length = 153 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S +L + E T+ V IR +R+ + + + P+ I T+ G Sbjct: 87 LEILLSNKGQVLSGEKLFHLLRENEYYLKATNTITVHIRNLREKMQDSFEHPQYIKTVWG 146 Query: 61 EGY 63 GY Sbjct: 147 VGY 149 >UniRef50_D1PRQ3 DNA-binding response regulator SrrA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRQ3_9FIRM Length = 129 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 4/66 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N +R++LL G + RTVDV I R+R+ + I T+ Sbjct: 64 LETLVRNRNIALTRSQLLTDAWGYDYIGESRTVDVHINRVRRKLGL----EQEIQTVFKV 119 Query: 62 GYRFCG 67 GYR Sbjct: 120 GYRLNT 125 >UniRef50_A9GKN3 Conserved hypothetical protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GKN3_SORC5 Length = 312 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + CE GK+ SR ELL+++ G + + RTVD+ +RR+R + + T+ G Sbjct: 167 LSYVCERRGKVVSRTELLRRVWGSQYEGGARTVDIHVRRLRAKLGAALP----LVTLRGA 222 Query: 62 GYRFCGDL 69 GYR + Sbjct: 223 GYRLESPI 230 >UniRef50_Q2W608 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W608_MAGSA Length = 228 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + + +LK + G + V + ++R+ E P P +I T G Sbjct: 159 LAFFARHPDHVLTHKHILKGVWGPAHVDDTAYLRVYVNQLRQKLEDDPARPRLIVTDPGV 218 Query: 62 GYRFCGDLE 70 GYR D + Sbjct: 219 GYRLRSDPQ 227 >UniRef50_B7K2S9 Two component transcriptional regulator, winged helix family n=2 Tax=Cyanothece RepID=B7K2S9_CYAP8 Length = 635 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR ++ ++ + P + T+ I+ +R+ ++ T +I T++G Sbjct: 158 LELFLRHPQRVFSRQVIIDQIWTLDKVPGEETISSHIKALRQKLKAVGMTQNMIKTVYGF 217 Query: 62 GYRFCGDLED 71 GYR G+L++ Sbjct: 218 GYRL-GELQE 226 >UniRef50_B5HT18 Repressor-response regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HT18_9ACTO Length = 246 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P + SR +L+ + E RTVD + +R I T+ G Sbjct: 157 ILLLLASAPETVISRRDLIAAVWADEWAISTRTVDTHVSALRAKLGE-----GWITTVRG 211 Query: 61 EGYRFC 66 GYR Sbjct: 212 VGYRLE 217 >UniRef50_A6QA63 Two-component response regulator n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA63_SULNB Length = 236 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 E G++ SR + DR++DV + RIR+ P I ++ G Sbjct: 169 IFALLLEKKGEVVSREYIANSTDSLRWDSSDRSIDVIVGRIRQKIGDDSRHPHYIKSVRG 228 Query: 61 EGYRFCG 67 GY++ G Sbjct: 229 VGYKYIG 235 >UniRef50_Q188S8 Two-component response regulator n=28 Tax=Bacteria RepID=Q188S8_CLOD6 Length = 224 Score = 79.0 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG++ + ++ ++ G + + IR+IR I T+ G Sbjct: 159 IVELLSMNPGQVFDKEKIYDRVWGYNSNGNSDVIMEHIRKIRIKLSKHTLE-NYIETVWG 217 Query: 61 EGYRFCG 67 GY++ Sbjct: 218 VGYKWIK 224 >UniRef50_A9KNR4 Two component transcriptional regulator, winged helix family n=4 Tax=Firmicutes RepID=A9KNR4_CLOPH Length = 227 Score = 79.0 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 8/72 (11%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHG 60 + + P ++ +R +++ + + +DR +D ++ +RK P I T+ G Sbjct: 158 LQMLWKEPNRVFTREQIILHIFNEDYIGNDRIIDAHVKNLRKKL------PFYCIRTVIG 211 Query: 61 EGYRF-CGDLED 71 GY+F LE+ Sbjct: 212 VGYQFDIAQLEN 223 >UniRef50_P08368 Transcriptional regulatory protein creB n=64 Tax=Proteobacteria RepID=CREB_ECOLI Length = 229 Score = 78.6 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG++ SR +L+ + +DRTVD I+ +R + I T G Sbjct: 163 LKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGM 222 Query: 62 GYRFCG 67 GY G Sbjct: 223 GYSLRG 228 >UniRef50_C6WIA6 Two component transcriptional regulator, winged helix family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WIA6_ACTMD Length = 244 Score = 78.6 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN ++++R +L ++ G E D VDV + +R+ + + IAT+ G Sbjct: 176 LAAITENTRQVRTRDQLRRRAWGEEWLADDHAVDVHVSNLRRKLVAAGAPRDFIATVRGV 235 Query: 62 GYRFCGDLE 70 GYR ++ Sbjct: 236 GYRVNQEVR 244 >UniRef50_Q1NHM9 DNA-binding response regulator n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHM9_9SPHN Length = 224 Score = 78.6 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 9/71 (12%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFES----TPDTPEIIAT 57 + ++ SRA LL+++ P V+ + R+R+ + P I T Sbjct: 158 LEQLIRQQDQVVSRAMLLEQVWHFHFDPQTNIVETHMSRLRQKLNAGFDCDP-----IQT 212 Query: 58 IHGEGYRFCGD 68 + G GY+ D Sbjct: 213 VRGVGYKLRSD 223 >UniRef50_A5FVA6 Two component transcriptional regulator, winged helix family n=6 Tax=Bacteria RepID=A5FVA6_ACICJ Length = 244 Score = 78.6 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ +R LL+ + P V+ + R+R E++ T+ G Sbjct: 179 VLEYLMRHAGRVVTRTMLLEDVWNFHFDPRTSVVESHVSRLRAKLG---AGRELLHTVRG 235 Query: 61 EGYR 64 GYR Sbjct: 236 AGYR 239 >UniRef50_P50351 Transcriptional regulatory protein chvI n=188 Tax=cellular organisms RepID=CHVI_RHISN Length = 241 Score = 78.6 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG ++SR L+ ++ DRT+D I+R+RK F+ ++I T++G Sbjct: 173 ILHSLAQRPGVVKSRDALMDAAYDEQVYVDDRTIDSHIKRLRKKFKMVDVDFDMIETLYG 232 Query: 61 EGYRF 65 GYRF Sbjct: 233 VGYRF 237 >UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJR7_CELJU Length = 499 Score = 78.6 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F ++PG++ + +L + ++ D ++ V I +RK P +P I TI G Sbjct: 52 LLMFIDHPGEVLEKERILATIWQGKVVNDD-SLAVAISHLRKALGDNPRSPRYIKTIPGV 110 Query: 62 GYRF---CGDLED 71 GY+F +E+ Sbjct: 111 GYQFIASAAPVEE 123 >UniRef50_D1VJ14 Two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VJ14_9ACTO Length = 284 Score = 78.6 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++++R E+ +++ G + +DV I +R+ PE+I T++G Sbjct: 218 LAYLAADPGRVRTRREIFQEIWGP-WFGSTKVLDVHIGSLRRKLG----RPELIETVYGV 272 Query: 62 GYRFCGDLE 70 G+R E Sbjct: 273 GFRLADPAE 281 >UniRef50_C3JSB6 Two component transcriptional regulator, winged helix family n=2 Tax=Rhodococcus erythropolis RepID=C3JSB6_RHOER Length = 249 Score = 78.6 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ + G + S++E+ + G TV V ++R+R+ S + I TI G Sbjct: 182 LVYLIKRRGHVASQSEISLAVWG--HSAETNTVAVHVKRLREKLGSDTQHGQFIRTIRGA 239 Query: 62 GYRFCG 67 GYR Sbjct: 240 GYRLAP 245 >UniRef50_C1AAZ5 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAZ5_GEMAT Length = 239 Score = 78.6 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E G++Q R LL+ + RTVD+ ++R+R + E+I T+ G Sbjct: 171 LLTLAERRGRVQGRGHLLETVWEAAPDIQTRTVDMHVQRLRSKLGAAG---ELIETVRGF 227 Query: 62 GYRFCG 67 GYR Sbjct: 228 GYRLRA 233 >UniRef50_B1I7Y4 Response regulator SaeR n=46 Tax=Firmicutes RepID=B1I7Y4_STRPI Length = 232 Score = 78.6 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPE-IIATIHG 60 + NP ++ S+ +L +K+ + T++V I +R+ I T+ G Sbjct: 161 LWILASNPERVFSKTDLYEKIWKEDYVDDTNTLNVHIHALRQELAKYSSDQTPTIKTVWG 220 Query: 61 EGYR 64 GY+ Sbjct: 221 LGYK 224 >UniRef50_A3QF24 Two component transcriptional regulator, winged helix family n=4 Tax=Gammaproteobacteria RepID=A3QF24_SHELP Length = 246 Score = 78.6 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+I R + + + RT+D+ + RIR+ P I TIHG+ Sbjct: 180 LWLLASRPGEICDRDSISDYFSDLGYESSHRTIDLRVSRIRRKLGDDPSHATRIKTIHGK 239 Query: 62 GYRFCGD 68 GY F GD Sbjct: 240 GYLFVGD 246 >UniRef50_B5IP04 Two-component response regulator n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IP04_9CHRO Length = 235 Score = 78.6 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRF 65 +P ++Q RA++LK + G D +DV IR +R+ E P + +I T+ G G+ Sbjct: 172 HPKQVQRRADILKAVWGETWVGDDNVLDVYIRSLRRKLEP-PGSTTLIQTVRGVGFML 228 >UniRef50_A8ZMT3 Transcriptional regulatory protein, C terminal domain n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMT3_ACAM1 Length = 68 Score = 78.6 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Query: 4 HFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +PG +R+E L K+ G E + +DV I +R+ + + P++I T+HG Sbjct: 3 LLATHPGVPIARSEFLDKVWGYSRETNIDTQVIDVHISHLRRKLGDSCERPKLIHTVHGV 62 Query: 62 GY 63 GY Sbjct: 63 GY 64 >UniRef50_B7K2G1 Two component transcriptional regulator, winged helix family n=3 Tax=Cyanobacteria RepID=B7K2G1_CYAP8 Length = 239 Score = 78.6 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P KI R L++++ + DR VDV I +IRK + +I T+ G Sbjct: 169 LHFLATHPNKIWERGALIEQVWRENQEIGADRKVDVHIGQIRKKIDDL--EGRLIKTVRG 226 Query: 61 EGYRF 65 GY F Sbjct: 227 RGYMF 231 >UniRef50_Q6AQP4 Probable two-component system response regulator (Pho family) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQP4_DESPS Length = 224 Score = 78.6 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ EN G S+ +L+K+ G P VDV + R+R + ++I TI G Sbjct: 159 LLYMAENAGTALSKTSILEKVYGYNFDPQTNVVDVLVCRLRAKIDKGFGQ-QLIQTIRGV 217 Query: 62 GYRFCG 67 GY Sbjct: 218 GYVLRS 223 >UniRef50_C1F979 DNA-binding response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F979_ACIC5 Length = 234 Score = 78.2 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SRA LL+++ + VDV + +R+ P +I T+ G Sbjct: 158 LECLMLHRGRPVSRARLLEEVWHESAENGTNIVDVYVNYLRRKLGDEGPAP-LIQTVRGL 216 Query: 62 GY 63 GY Sbjct: 217 GY 218 >UniRef50_C6HXQ3 Two component transcriptional regulator, winged helix family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXQ3_9BACT Length = 269 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++H +PGK+ R EL+ + G + D + V I +RK D I T+ G Sbjct: 200 ILVHLVRDPGKVYPREELMSLLWGEHWEVEDHNLSVHIHGLRKKLARPEDDRTPIETVRG 259 Query: 61 EGYR 64 GYR Sbjct: 260 VGYR 263 >UniRef50_UPI000196B4E5 hypothetical protein CATMIT_00997 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4E5 Length = 236 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 F N ++ +R+++L K+ G + R VD I+++RK I TI GY Sbjct: 173 LFLNNKNQLFTRSQILNKVWGYDYYGDGRAVDTYIKKLRKKLG---VHSHRIQTIMKAGY 229 Query: 64 RFCGDLE 70 + + + Sbjct: 230 TYTDEED 236 >UniRef50_Q212W6 Two component transcriptional regulator, winged helix family n=17 Tax=Alphaproteobacteria RepID=Q212W6_RHOPB Length = 270 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPD-TPEIIATIHG 60 + F + PG++ SR +LL GR DR++DV I R+R+ P T ++ T+ Sbjct: 198 LQVFLDRPGRVLSRDQLLDFTRGR-SDTFDRSIDVLISRVRRKL--DPSGTARLLKTVRN 254 Query: 61 EGYRFCGDLE 70 GY+F +E Sbjct: 255 GGYQFVVKVE 264 >UniRef50_C3XEK1 Response regulator ompR n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XEK1_9HELI Length = 220 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +N + SR + + R++D IR +R + P+ I ++ G Sbjct: 154 ILLFLVDNRLQPVSRERIAHTINAIHDDTGLRSIDTHIRNLRNKLGDSAKEPKFIQSVWG 213 Query: 61 EGYRFC 66 GY+FC Sbjct: 214 IGYKFC 219 >UniRef50_B4SKL2 Two component transcriptional regulator, winged helix family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SKL2_STRM5 Length = 235 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFE-STPDTPEIIATIHG 60 +L E PG++ +R +LL+ DR +D+ I R+R+ + P ++ T+ G Sbjct: 164 LLVLAERPGRVLAREQLLQLSRSEPSDSVDRAIDLAISRLRRKLGQAAPGAEALVQTLRG 223 Query: 61 EGYRFCGDLE 70 EGYRF +++ Sbjct: 224 EGYRFDAEVQ 233 >UniRef50_Q72TM3 Response regulator n=2 Tax=Leptospira interrogans RepID=Q72TM3_LEPIC Length = 227 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 34/65 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ GK+ ++ ++++ + G K ++ V + +RK E P +PE++ T G Sbjct: 160 LTFLIQHAGKVLTQEQIIRHVWGPFAKNESGSLRVHVASLRKKIELDPSSPELLLTEPGV 219 Query: 62 GYRFC 66 GYR Sbjct: 220 GYRLA 224 >UniRef50_A4ZV27 RsrR n=2 Tax=Acidithiobacillus caldus RepID=A4ZV27_9GAMM Length = 238 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ G+ SR L+ GR DR++D+ I R+RK +S D + I T+ G Sbjct: 171 LSTLIKHEGQPLSRERLMLLSRGRTYASDDRSIDMQISRLRKLLDSKTDGAQHIRTVWGS 230 Query: 62 GYRFCGD 68 GY F + Sbjct: 231 GYMFLSE 237 >UniRef50_A8ETZ6 Two-component response regulator n=80 Tax=Bacteria RepID=A8ETZ6_ARCB4 Length = 228 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G + SR ELL + + + +++DV I R+R E P+ I +I G Sbjct: 161 ILQYLISRAGFVVSRQELLSNVDSIKYESSYKSIDVLIGRVRAKTEENTKNPKYILSIRG 220 Query: 61 EGYRFCGD 68 GY+ Sbjct: 221 VGYKLVNQ 228 >UniRef50_B7VQ15 DNA-binding response regulator n=8 Tax=Vibrionales RepID=B7VQ15_VIBSL Length = 234 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 29/66 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP SR L + + G E DRT+D + R+RK E I TI G+ Sbjct: 165 LWLLASNPDTPLSRDYLTQTLRGIEYDGIDRTIDNKVVRLRKILGDDKTPAEKIQTIRGK 224 Query: 62 GYRFCG 67 GY F Sbjct: 225 GYLFVS 230 >UniRef50_A0RG02 Two-component response regulator n=92 Tax=Bacteria RepID=A0RG02_BACAH Length = 236 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N + +R ++ + + + + +DV +R +RK + ++I T+ G Sbjct: 169 ILEYMIRNKEVVLTRDKIEQHVWNYDYEGGSNIIDVYVRYLRKKV-DSQFETKLIHTVRG 227 Query: 61 EGYRFCGD 68 GY + Sbjct: 228 TGYVLRVE 235 >UniRef50_Q9ETC5 Two component system response regulator n=2 Tax=Rhodococcus equi RepID=Q9ETC5_COREQ Length = 252 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F +NP I SR +LL+++ TV V +RR+RK I T+ G Sbjct: 172 LAYFMKNPFVIHSRQDLLERVWKWSY-GDLSTVTVHVRRLRKRLG----NYSRIETVWGR 226 Query: 62 GYRFCG 67 GYR+ Sbjct: 227 GYRWIP 232 >UniRef50_Q1IUY4 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUY4_ACIBL Length = 232 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G+ SR L+ + G + + T+D IR +R+ T P++I T+ G Sbjct: 158 LQKLMQNAGRPVSRQSLIGNVWGYDRAIENNTLDAFIRLLRQKV-DTQGHPKLIQTVRGF 216 Query: 62 GY---RFCGDLED 71 GY + GD ++ Sbjct: 217 GYSARKLSGDDQE 229 >UniRef50_A3PND2 Two component transcriptional regulator, winged helix family n=4 Tax=Rhodobacter sphaeroides RepID=A3PND2_RHOS1 Length = 233 Score = 78.2 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ SR +++ + GR+ + +DR VD + R+R+ ++ I T+HG Sbjct: 168 LAALLGRRGQVLSRDQIMNAIKGRQWESYDRVVDGIVSRLRRKLPASRSGSPFIRTVHGV 227 Query: 62 GYRFCG 67 GY F G Sbjct: 228 GYTFAG 233 >UniRef50_Q7ULL1 Two-component system response regulator n=1 Tax=Rhodopirellula baltica RepID=Q7ULL1_RHOBA Length = 239 Score = 78.2 bits (193), Expect = 8e-14, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + G + R L ++ G P+ RTVD T+ ++RK E P P II T++G Sbjct: 169 ILILLHDADGDVVHRQTLFQECWGHNRVPNSRTVDQTVSQLRKRIERDPKHPRIIQTVYG 228 Query: 61 EGYRFC 66 GYR+ Sbjct: 229 LGYRYE 234 >UniRef50_A5FBX2 Two component transcriptional regulator, winged helix family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FBX2_FLAJ1 Length = 223 Score = 78.2 bits (193), Expect = 8e-14, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 7 ENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRF 65 EN K+ SR ++L + G + VDV I +R E I TI G GY Sbjct: 166 ENRNKVMSRTQILTAVWGINYDNNTNVVDVYISYLRNKIEHNHK---FIHTIKGIGYML 221 >UniRef50_B0RLM8 Transcriptional regulator n=6 Tax=Xanthomonas RepID=B0RLM8_XANCB Length = 1172 Score = 78.2 bits (193), Expect = 8e-14, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 5/71 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVT--IRRIRKHFESTPDTPEIIATI 58 ++ E G++ S +LL + + V I ++R+ P I TI Sbjct: 106 VLVALAERAGEVISAEQLLIDVWHGSFYGDN---PVHKTIAQLRRKLGDDSRQPRFIETI 162 Query: 59 HGEGYRFCGDL 69 GYR + Sbjct: 163 RKRGYRLLPKV 173 >UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GQ2_SACD2 Length = 425 Score = 78.2 bits (193), Expect = 8e-14, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++ EN ++ SR EL +K+ T+ I+ RK + I T+ G Sbjct: 33 IIVYLIENRNRLVSRDELFEKIWDARAVSDT-TLSNHIKSARKALGDDGEQQHTIKTVRG 91 Query: 61 EGYRFCGDL 69 GY+F ++ Sbjct: 92 RGYQFIAEV 100 >UniRef50_A8L7H2 Putative two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EAN1pec RepID=A8L7H2_FRASN Length = 124 Score = 78.2 bits (193), Expect = 8e-14, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE----LKPHDRTVDVTIRRIRKHFESTPDTPEIIA 56 + + NPG++ SR ELL+++ ++ RTVDV I R+R+ I Sbjct: 42 VLDYLVRNPGRVHSREELLREVWRQDPGALGASAPRTVDVMITRLRRKLGRHHRD--HIE 99 Query: 57 TIHGEGYRFCGDLED 71 T+ GYR+ ++ Sbjct: 100 TVRRVGYRYRPAGDE 114 >UniRef50_C6LFE5 DNA-binding response regulator CsrR n=2 Tax=Firmicutes RepID=C6LFE5_9FIRM Length = 247 Score = 78.2 bits (193), Expect = 8e-14, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN + +R LL ++ G + VDV IR +R ++I T+ G Sbjct: 175 LKTLLENQDIVLTREVLLNRVCGYDYVGETNVVDVYIRFLRAKI-DEAFQIKMIQTVRGV 233 Query: 62 GYRFCGDLED 71 GY + D Sbjct: 234 GYVIKSEAPD 243 >UniRef50_A0LU58 Two component transcriptional regulator, winged helix family n=16 Tax=Bacteria RepID=A0LU58_ACIC1 Length = 240 Score = 77.8 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ + +LL + G + + V + ++R+ E P P + T G Sbjct: 158 ILDILARHAGRLVTTRQLLHDVWGPTYRNETHYLRVYMAQLRRKLEPDPAHPRYLRTEPG 217 Query: 61 EGYRFCGD 68 GYR + Sbjct: 218 IGYRLVVE 225 >UniRef50_A4SHT1 Two-component system response regulator n=10 Tax=Proteobacteria RepID=A4SHT1_AERS4 Length = 218 Score = 77.8 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + ++ GK+ SR+EL+ + ++ TV+V I RIRK ++I T+ G Sbjct: 157 VLGYLMQHRGKVVSRSELIDHIYAQDFDRDSNTVEVFIGRIRKK-----THADLIETVRG 211 Query: 61 EGYR 64 GYR Sbjct: 212 LGYR 215 >UniRef50_C4RGF6 Two-component system response regulator receiver n=5 Tax=Actinomycetales RepID=C4RGF6_9ACTO Length = 231 Score = 77.8 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H PG++ +R ELL + G RTVDV + ++R +I T G Sbjct: 169 LAHLMARPGRVFTRGELLAAVWGYAAHSSTRTVDVHVAQVRAKLG---GAAGVIRTHRGV 225 Query: 62 GY 63 GY Sbjct: 226 GY 227 >UniRef50_A4AIS8 Two-component system, regulatory protein n=2 Tax=Actinobacteria (class) RepID=A4AIS8_9ACTN Length = 242 Score = 77.8 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ +R+ +L ++ G VD + +R+ E T I+T+ G Sbjct: 176 LWMLATHPGEALTRSTILSEVWGTTAHIDANVVDQYVSYLRRKLEPTQSG-VTISTVRGV 234 Query: 62 GYRFCG 67 GY Sbjct: 235 GYALSA 240 >UniRef50_D1BJH9 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Actinomycetales RepID=D1BJH9_SANKS Length = 253 Score = 77.8 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ +R LL+ + G +L P R VD + IR+ P + T+ Sbjct: 183 LDYLMTHPRELHTRERLLQALWGFDLVPSTRAVDHRVAEIRRVLHDDAGAPRYVETVPNL 242 Query: 62 GYRFCGDLE 70 GYRFCG + Sbjct: 243 GYRFCGQVR 251 >UniRef50_Q47QJ3 Response regulator receiver n=1 Tax=Thermobifida fusca YX RepID=Q47QJ3_THEFY Length = 218 Score = 77.8 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG + SRAE++ K+ G + RT+ V + +R+ P +I T+ G Sbjct: 152 LRVLIERPGHVVSRAEIMHKVWGYTPESDTRTLGVHMVSLRRKL----ALPSLIETVRGV 207 Query: 62 GYRFCGD 68 GYR + Sbjct: 208 GYRITSE 214 >UniRef50_B4WP26 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WP26_9SYNE Length = 676 Score = 77.8 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP + SR ++ + P + TV ++ +R+ + ++I T++G Sbjct: 159 LELFLRNPAQAFSREAIIDNLWSYSDAPGEETVTSHMKGLRRKLRTVGAPADLIETVYGV 218 Query: 62 GYRFCG 67 GYR Sbjct: 219 GYRLKP 224 >UniRef50_D1WUT0 Two component transcriptional regulator, winged helix family n=2 Tax=Streptomyces RepID=D1WUT0_9ACTO Length = 229 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P + +R EL+ ++ G + RT+D + +R S I T+ G Sbjct: 158 LYTLAATPETVVTRKELMARVWGSDWGHTSRTIDTHVSSLRAKLGSGG----WIITVRGV 213 Query: 62 GYR 64 GYR Sbjct: 214 GYR 216 >UniRef50_Q7NGT9 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NGT9_GLOVI Length = 234 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+ ++ SR +L + G V+V IR +R E + ++I T+ Sbjct: 170 LHYLIEHAREVLSRERILLNVWGESFDGESNIVEVYIRYLRLKIEREGEK-KLIHTVRSV 228 Query: 62 GY 63 GY Sbjct: 229 GY 230 >UniRef50_Q47IJ9 Two component transcriptional regulator, winged helix family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IJ9_DECAR Length = 227 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 N G++ SR ELL + +E RTVD R+RK ++ ++++++G+GYR Sbjct: 161 LLRNVGRVLSREELLTSVWSKEAGVDTRTVDTHASRLRKKLGLAGESGLMLSSVYGQGYR 220 Query: 65 FCG 67 Sbjct: 221 LDT 223 >UniRef50_Q0RFU4 Two-component system response regulator n=18 Tax=root RepID=Q0RFU4_FRAAA Length = 278 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++++R E+ + G + + +DV I IR+ PE+I T++G Sbjct: 158 LAFLAADPGRVRTRQEIFTGVWG-DWFGSPKVLDVHIGAIRRKLG----KPELIETVYGV 212 Query: 62 GYRFCG 67 G+R G Sbjct: 213 GFRLAG 218 >UniRef50_B8FGR7 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfobacteraceae RepID=B8FGR7_DESAA Length = 242 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N GK SR ELL+ G RTVD I R RK+FE P P+ ++ Sbjct: 176 LKLFFTNRGKPLSRKELLEMGWGYTGATSTRTVDNFIVRFRKYFEDNPKKPKYFKSLRSV 235 Query: 62 GYRFCGD 68 GY F + Sbjct: 236 GYIFDFE 242 >UniRef50_Q0AKG2 Two component transcriptional regulator, winged helix family n=98 Tax=Alphaproteobacteria RepID=Q0AKG2_MARMM Length = 256 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK R ELL ++ G T++ I R+R+ E P ++ T G Sbjct: 191 ILKYLYRAGGKPVPRDELLHEVWGYNPAVTTHTLETHIYRLRQKIEPDPAHARLLVTESG 250 Query: 61 EGYRF 65 GYR Sbjct: 251 -GYRL 254 >UniRef50_C6LDD6 DNA-binding response regulator n=3 Tax=Clostridiales RepID=C6LDD6_9FIRM Length = 130 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + NP ++ + + + + + R + I ++RK PD P I ++ Sbjct: 62 ILALLIANPKRVFTYELITDLVWKEDCDFYSRKAIHNHISKLRKKLRFEPDLPNYIESVA 121 Query: 60 GEGYRFC 66 G GY+F Sbjct: 122 GIGYKFE 128 >UniRef50_A1SMF6 Transcriptional regulator domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SMF6_NOCSJ Length = 142 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 E G++ +R +L++ + +T+DV + +R+ P +I TI GEG Sbjct: 73 RALMERAGEVVTRDDLMRDVWHTTFWTSSKTIDVHLGWVRRKLGDDSRHPRLITTIRGEG 132 Query: 63 YRFCGDLE 70 RF + Sbjct: 133 LRFETEDR 140 >UniRef50_C6LHZ3 Regulatory protein VanR n=2 Tax=Clostridiales RepID=C6LHZ3_9FIRM Length = 224 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G R+ L+ + G + + V ++R+R E P I TI+G Sbjct: 158 LRILVENRGAAIRRSYLIDTVWQGDTEYVDEHALTVAVKRLRDKLEDDSANPAYIKTIYG 217 Query: 61 EGYRFC 66 GY + Sbjct: 218 IGYMWA 223 >UniRef50_A8SMV7 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMV7_9FIRM Length = 229 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP KI SR ++ K + E R +DV IRR+R+ I T G Sbjct: 162 ILYIMAINPEKIFSREDIAKTVWKEEHVSDYRKIDVHIRRLREKI--NIGNITYIQTKWG 219 Query: 61 EGY 63 EGY Sbjct: 220 EGY 222 >UniRef50_Q1ISH8 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ISH8_ACIBL Length = 619 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ ++ +R E+++K+ +L +R ++ +R+IR PD P + T+ G Sbjct: 66 LMFLVSRREQMVTREEIIRKIWRTDLFIDAERNLNNIVRKIRTALGDDPDRPRFLETVVG 125 Query: 61 EGYRFCGDLE 70 GYRF G + Sbjct: 126 VGYRFIGPMR 135 >UniRef50_D2R5T3 Two component transcriptional regulator, winged helix family n=6 Tax=Planctomycetaceae RepID=D2R5T3_9PLAN Length = 236 Score = 77.8 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ RAEL+ G + +RT+DV IR +R+ D +I T+ G Sbjct: 165 LDTLIRQPGRVFHRAELIDAALGEDTMVMERTIDVHIRALRRKLGQYAD---VIETVRGV 221 Query: 62 GYRF 65 GYR+ Sbjct: 222 GYRY 225 >UniRef50_C6VUR1 Two component transcriptional regulator, winged helix family n=3 Tax=Sphingobacteriales RepID=C6VUR1_DYAFD Length = 226 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ EN K+ +R+++L+ + + + VDV I +R + ++I T+ G Sbjct: 160 LVYLMENQNKVLTRSQILQVVWSTNMDTYTNVVDVYISYLRNKIDVDFPD-KLIRTVKGT 218 Query: 62 GYR 64 GY Sbjct: 219 GYM 221 >UniRef50_B4WSX3 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WSX3_9SYNE Length = 640 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ S ++ + E P + V ++ +R+ ++ + I T++G Sbjct: 184 LELFLRHPNQVFSIDAIIDNLWSFEDPPSEDAVRTHVKGLRQKLKAGGAPKDFIQTVYGL 243 Query: 62 GYRFCG 67 GYR Sbjct: 244 GYRLKA 249 >UniRef50_UPI000185BED4 KDP operon transcriptional regulatory protein KdpE n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BED4 Length = 247 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++ ++ G++ ++ ELLK + G + + + V I ++R E + + T G Sbjct: 178 ILVYLVQHRGELVTKLELLKAVWGDQYEKETNYLRVYISQLRHKIEPQQAHNKYLRTEVG 237 Query: 61 EGYRFCGDLE 70 GYR D E Sbjct: 238 VGYRMVLDEE 247 >UniRef50_Q0RUE0 Putative glnR family transcriptional regulatory protein n=3 Tax=Actinomycetales RepID=Q0RUE0_FRAAA Length = 101 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 6/71 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELK----PHDRTVDVTIRRIRKHFESTPDTPEIIA 56 + F +PG+ SR LL + G + P RTVDV + R+R+ P+ I Sbjct: 26 VLDFFVHHPGQAHSRQALLSSVWGHQADDETSPDVRTVDVLVTRLRRKLG--PEHRYRIE 83 Query: 57 TIHGEGYRFCG 67 T+ GYR+ Sbjct: 84 TVRRVGYRYRP 94 >UniRef50_C0Z6C7 Two-component response regulator n=3 Tax=Bacillales RepID=C0Z6C7_BREBN Length = 230 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G + S+ +L + G + + V+V IR +R II T+ G Sbjct: 166 LKYLVTNHGLVLSKPMILDNVWGYDFGGEENIVEVYIRSLRDKLND--RQHRIIRTLRGA 223 Query: 62 GYR 64 GYR Sbjct: 224 GYR 226 >UniRef50_A3Y9U3 Response regulator protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9U3_9GAMM Length = 243 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPE-----IIA 56 +L ++P + SR ++L + G E++ R+VD+ I R+R+ F++ I Sbjct: 170 LLLMAKSPQTVFSRDDILNHLKGVEIELFSRSVDIAISRLRQKFKAATPDDHHVSVDFIK 229 Query: 57 TIHGEGYRFCGD 68 T+ G GY F G+ Sbjct: 230 TVWGAGYCFVGE 241 >UniRef50_C9NBD5 Two component transcriptional regulator, winged helix family n=6 Tax=Streptomyces RepID=C9NBD5_9ACTO Length = 230 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG + R +++ ++ + RT++V + +R P ++ T+ G Sbjct: 166 LALLAQRPGVVFRREQIISEVWRTSWEGTGRTLEVHVASLRSKL----RLPALVETVRGV 221 Query: 62 GYRFCGD 68 GYR Sbjct: 222 GYRLVPP 228 >UniRef50_C8NDP1 DNA-binding response regulator n=2 Tax=Firmicutes RepID=C8NDP1_9LACT Length = 220 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + ++ G+ SR+++L + E P DR VDV I+++RK + I TI Sbjct: 157 ILKLLVKHEGQALSRSQILDHVWSNHEDPPFDRVVDVYIKQLRKKLKLD-----CIVTIK 211 Query: 60 GEGYRFC 66 GY+ Sbjct: 212 NVGYKLE 218 >UniRef50_UPI0001C35523 two component transcriptional regulator, winged helix family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35523 Length = 303 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI--IATIHG 60 L NPG+I S +EL +++ + TV V + R+R E P I I T+ G Sbjct: 231 LFLLGNPGRILSASELYQEVWRTGKPDNANTVAVHMTRLRHKLEE--AEPVIGRIETVRG 288 Query: 61 EGYRFCGDLE 70 EGYRF +E Sbjct: 289 EGYRFLPKVE 298 >UniRef50_B7S398 Response regulator receiver domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S398_9GAMM Length = 241 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E P + SRA L+ + +RT+D I RIR DT ++ T+ G Sbjct: 171 VLRSLVERPNIVLSRASLVDFVYAENSYGSERTIDNLISRIRAKLSDYTDT-NLVKTVRG 229 Query: 61 EGYRFCGDLE 70 GY F G ++ Sbjct: 230 VGYVFTGTVK 239 >UniRef50_C6VX71 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteroidetes RepID=C6VX71_DYAFD Length = 232 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N ++ +R E+L+ + VDV I +RK + ++I T+ G Sbjct: 162 LEYLLSNTNRVLNRMEILENVWDINFNLGTNVVDVYINYLRKKIDKN-HDIKLIHTVFGM 220 Query: 62 GYRFCGDLED 71 GY ED Sbjct: 221 GYVIRQSYED 230 >UniRef50_Q0EY91 Two comoponent transcriptional regulator, winged helix family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY91_9PROT Length = 227 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G++ S+ EL + G+ P DRT+DV I +RK + +T I T+ Sbjct: 160 ILTVLMQHAGEVVSKYELSQAALGKRHGPFDRTLDVHIGHLRKKISAADNTEARIKTVRS 219 Query: 61 EGYRFCGD 68 G+ F + Sbjct: 220 VGWLFVPE 227 >UniRef50_A0PWB4 Response regulator mprA n=284 Tax=Bacteria RepID=MPRA_MYCUA Length = 232 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ +R+ +L+++ G + ++V + +R+ E+ P +I T+ G Sbjct: 165 LEMLIANPRRVLTRSRILEEVWGFDFPTSGNALEVYVGYLRRKTEAEG-EPRLIHTVRGV 223 Query: 62 GYRF 65 GY Sbjct: 224 GYVL 227 >UniRef50_Q1LCD6 Two component transcriptional regulator, winged helix family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LCD6_RALME Length = 225 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + G+I SRA+L + + +L D +DV ++ +R+ + P +I T+ G Sbjct: 156 ILILLVTHAGEIVSRAQLAEHIWHADLIAIDNLIDVHMKNLRRKLDP-PGMAALIQTVRG 214 Query: 61 EGYRFCG 67 +G+R Sbjct: 215 QGFRISP 221 >UniRef50_C4RRF2 Two-component system response regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RRF2_9ACTO Length = 166 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ E+P + +R +LL+ + + + R+VDV +RR+R F + ++ T+ G Sbjct: 94 LLYLAEHPRQAFTRRQLLQHVW-EQSRTSPRSVDVHVRRLRAKFGADVP---VVTTLRGV 149 Query: 62 GYRFCGD 68 GYR D Sbjct: 150 GYRLGVD 156 >UniRef50_B0S191 DNA-binding response regulator n=2 Tax=Finegoldia magna RepID=B0S191_FINM2 Length = 232 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K+ SR EL K+ + + H RTVDV I+R+R+ + II T GE Sbjct: 166 LYALVSNKDKVLSRKELAAKLW-EDAQSHIRTVDVHIKRLREKIKDN--ESIIIRTKWGE 222 Query: 62 GYRFCGDLE 70 GY F + + Sbjct: 223 GYYFSSNTK 231 >UniRef50_B5J7Y1 Response regulator receiver domain protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J7Y1_9RHOB Length = 298 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 32/70 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F P + R L + + G EL+ DR++D+ + R+R I T+ G Sbjct: 221 LKIFVHRPSEAIDRNTLSELLRGHELEAFDRSIDLHVSRLRSKLGPRVGGGNFIKTVRGT 280 Query: 62 GYRFCGDLED 71 GY F ++ + Sbjct: 281 GYMFDLEVTE 290 >UniRef50_B8HC02 Two component transcriptional regulator, winged helix family n=12 Tax=Actinomycetales RepID=B8HC02_ARTCA Length = 224 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + +R ++L + G R++DV + +R P I + G Sbjct: 160 LALLARHAGSVVTREQILDALWGDAFLASSRSLDVHLTGLRAKL----QMPGFIINVRGV 215 Query: 62 GYRFCGD 68 GYR D Sbjct: 216 GYRVEAD 222 >UniRef50_B5VWD3 Multi-component transcriptional regulator, winged helix family n=2 Tax=Arthrospira RepID=B5VWD3_SPIMA Length = 628 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N + S ++L K+ + P TV I+ +R+ ++ E I T++G Sbjct: 158 LELLMGNRQRTFSIDKILDKLWTFDDPPSANTVRAHIKGLRQKLKAAGAGAEFIETVYGL 217 Query: 62 GYRFCGDLE 70 GYR +LE Sbjct: 218 GYRLNQNLE 226 >UniRef50_A7AYZ8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AYZ8_RUMGN Length = 190 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 + ++ +R L++++ G + ++TV++ I +R+ I TI G Y+F Sbjct: 134 HKNQVLTRDNLIQQVWGYDFAGDEKTVNIHIMNLRRKL-----DTGCIHTIRGVRYKFES 188 >UniRef50_Q7M8N6 RESPONSE REGULATOR OMPR-CheY-like and winged-helix DNA-binding domain n=1 Tax=Wolinella succinogenes RepID=Q7M8N6_WOLSU Length = 235 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 ++ GK +R ++ + ++VD I RIR P P I ++ G G Sbjct: 171 ALLLKHEGKALTRDFIVDNTEALRWESVGKSVDTIIGRIRVKIGDDPKNPRYIKSVRGVG 230 Query: 63 YRF 65 YRF Sbjct: 231 YRF 233 >UniRef50_Q187R9 Two-component system response regulator n=20 Tax=Bacteria RepID=Q187R9_CLOD6 Length = 228 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ENP I +R LL+K+ + + T+ I RIR E + I T++G Sbjct: 159 LKLLTENPKSILTRKVLLEKLWDIDANFVDEHTLTSVISRIRSKIEKD--NLKYIKTVYG 216 Query: 61 EGYRFCGDLED 71 GY + G+ + Sbjct: 217 MGYMWLGERNE 227 >UniRef50_D1AQD9 Two component transcriptional regulator, winged helix family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQD9_SEBTE Length = 226 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F +N ++ +R + +K+ + VDV I +R +II T+ G Sbjct: 162 LEYFLKNKNRVLTRTMISEKIWDIDFITESNIVDVYINFLRSKI-DKGYDKKIIKTVRGV 220 Query: 62 GY 63 GY Sbjct: 221 GY 222 >UniRef50_A8VZA3 Response regulator receiver protein n=2 Tax=Bacillus RepID=A8VZA3_9BACI Length = 233 Score = 77.4 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++HF ++P ++ +R +LL + G RTVD ++ +R S D T++G Sbjct: 166 LVHFMKHPEQVFNREQLLDHVWGVNYTTGGHRTVDTHMKTMRFKMGSGGD---YFRTVYG 222 Query: 61 EGYRFC 66 GY Sbjct: 223 VGYVLE 228 >UniRef50_A2CD17 Two-component response regulator n=58 Tax=Cyanobacteria RepID=A2CD17_PROM3 Length = 268 Score = 77.1 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ + + +LK++ G E T+ V +R +R E P P I T++G Sbjct: 168 LHCLLQRHGQTVAPSLILKEVWGYEPDDDIETIRVHVRHLRTKLEPDPRKPRFIKTVYGA 227 Query: 62 GYRFC 66 GY Sbjct: 228 GYCLE 232 >UniRef50_C9Z8Q7 Putative two-component response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z8Q7_STRSW Length = 251 Score = 77.1 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ENPG++ SR ++ +++ + VD I +R+ + +I T+ G Sbjct: 188 LRYLMENPGRVLSRGQIQERVWNHRDEGSG-VVDTYIYYLRRKLGEPGQS--LIRTVRGV 244 Query: 62 GYRFCG 67 GY+ C Sbjct: 245 GYQLCT 250 >UniRef50_B5IMP1 Two-component response regulator n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IMP1_9CHRO Length = 227 Score = 77.1 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ + + R ++L + G +D +DV IR +R+ + P +I T+ G Sbjct: 164 LLYLLRHKQTVLPRQQILYAVWGDSWVGNDNLLDVYIRYLRRKIDPPGLEP-LIHTVRGV 222 Query: 62 G 62 G Sbjct: 223 G 223 >UniRef50_C3X641 Two component transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X641_OXAFO Length = 231 Score = 77.1 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ P ++ + +LLK + G + V + +RK E P + T G Sbjct: 162 ILIFMTSQPDRVITHQQLLKAIWGPGHTEDMHYIRVHMANLRKKIEENASMPRHLITEAG 221 Query: 61 EGYRFCG 67 GYRF Sbjct: 222 IGYRFVP 228 >UniRef50_B0SY74 Two component transcriptional regulator, winged helix family n=2 Tax=Caulobacter sp. K31 RepID=B0SY74_CAUSK Length = 235 Score = 77.1 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK+ + +LL + G + + V + ++R+ E+ P TP +I T G Sbjct: 168 VLARLAQARGKVLTHKDLLTAVWGPAHAQDTQYLRVFVGQLRQKLEADPSTPRMILTEPG 227 Query: 61 EGYRFCGD 68 GYRF GD Sbjct: 228 IGYRFIGD 235 >UniRef50_A3JW86 DNA-binding response regulator n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JW86_9RHOB Length = 242 Score = 77.1 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F +NP + SR L+ + G +DR +D + R+R + I T+HG Sbjct: 174 LVFFLKNPNRALSRETLIANLRGSNWAGYDRAMDGLVSRLRGKLSKGNSSINYIKTMHGV 233 Query: 62 GYRFCGDLE 70 GY F + Sbjct: 234 GYLFIPKPK 242 >UniRef50_B5ZPT0 Two component transcriptional regulator, winged helix family n=8 Tax=Rhizobium RepID=B5ZPT0_RHILW Length = 246 Score = 77.1 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P + SRA++L ++ + DR VDV + R+R+ E PD P I T G+ Sbjct: 174 LEILAQTPNQPVSRAQILDRLGSESDRYIDRNVDVLVLRLRRKIERNPDLPRHIKTRRGK 233 Query: 62 GYRF 65 GY Sbjct: 234 GYVL 237 >UniRef50_UPI000050FFEF putative two component transcriptional regulator, winged helix family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FFEF Length = 275 Score = 77.1 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + R EL+ + P +RTVDV IRR+R+ +I T+ G Sbjct: 200 LATLVSHADSTLPREELITAVWSGGEVPDERTVDVHIRRLRRRLGEYSS---VIRTMRGS 256 Query: 62 GYRFCGDLE 70 GYR+ + Sbjct: 257 GYRYDTHPD 265 >UniRef50_C4G725 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G725_ABIDE Length = 259 Score = 77.1 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 +N GKI + L + + ++ V +R +R+ E P P + T+ G GY+ Sbjct: 195 LAKNRGKIVTTDTLCDALWPDGSYGLESSLIVHMRHLREKIEEEPSKPGFLKTVRGLGYK 254 Query: 65 FCGD 68 + Sbjct: 255 LEKE 258 >UniRef50_A8L660 Putative two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EAN1pec RepID=A8L660_FRASN Length = 134 Score = 77.1 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 F + ++ +R +LL + G + P VDV + +R+ + IAT+ G GYR Sbjct: 64 FLRHSSQVLAREQLLSAVWGYDYDPGSNIVDVYVGYLRRKLGA-----GRIATVRGMGYR 118 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P94504 Transcriptional regulatory protein yvrH n=5 Tax=... 116 2e-25 UniRef50_A8F5W8 Two component transcriptional regulator, winged ... 112 4e-24 UniRef50_Q65F19 Two-component response regulator YvrH n=85 Tax=F... 111 5e-24 UniRef50_Q1AZ24 Two component transcriptional regulator, winged ... 109 3e-23 UniRef50_B2J8Q5 Two component transcriptional regulator, winged ... 109 4e-23 UniRef50_C8VW64 Two component transcriptional regulator, winged ... 109 4e-23 UniRef50_D2Q6K7 Response regulator-like transcriptional regulato... 108 6e-23 UniRef50_Q2RZP5 Response regulator DrrA n=11 Tax=Bacteria RepID=... 108 6e-23 UniRef50_B7GTW3 Response regulator receiver protein n=6 Tax=Bifi... 108 6e-23 UniRef50_C6JFQ6 Putative uncharacterized protein n=1 Tax=Ruminoc... 108 7e-23 UniRef50_Q05943 Transcriptional regulatory protein glnR n=102 Ta... 107 1e-22 UniRef50_Q2BDN1 Two component transcriptional regulator, winged ... 107 1e-22 UniRef50_C9KKD5 Alkaline phosphatase synthesis transcriptional r... 107 1e-22 UniRef50_A6EAJ4 Response regulator (CheY-like receiver domain an... 107 1e-22 UniRef50_A8FHC6 Response regulator n=3 Tax=Bacillus RepID=A8FHC6... 107 1e-22 UniRef50_C3KZU0 DNA-binding response regulator n=14 Tax=Firmicut... 107 2e-22 UniRef50_A4J267 Two component transcriptional regulator, winged ... 106 2e-22 UniRef50_Q8DLA7 Two-component response regulator n=20 Tax=Bacter... 106 2e-22 UniRef50_Q7NMA6 Two-component response regulator n=2 Tax=Bacteri... 106 2e-22 UniRef50_Q1IMA9 Two component transcriptional regulator, winged ... 106 2e-22 UniRef50_A7GKH0 Two component transcriptional regulator, winged ... 105 3e-22 UniRef50_B8I014 Two component transcriptional regulator, winged ... 105 4e-22 UniRef50_C1XV31 Response regulator with CheY-like receiver domai... 105 4e-22 UniRef50_C3IWQ5 Two-component response regulator n=2 Tax=Bacillu... 105 4e-22 UniRef50_Q2S3D0 Alkaline phosphatase synthesis transcriptional r... 105 5e-22 UniRef50_A0PXH1 Transcriptional regulatory protein n=11 Tax=Clos... 105 5e-22 UniRef50_P39663 Alkaline phosphatase synthesis transcriptional r... 105 5e-22 UniRef50_C6XZP6 Response regulator receiver n=3 Tax=Sphingobacte... 105 6e-22 UniRef50_C1F3E6 Response regulator DrrA n=1 Tax=Acidobacterium c... 104 7e-22 UniRef50_O07130 Sensory transduction protein regX3 n=97 Tax=Acti... 104 8e-22 UniRef50_B8FSL6 Two component transcriptional regulator, winged ... 104 8e-22 UniRef50_Q67MV1 Two-component response regulator n=7 Tax=Clostri... 104 1e-21 UniRef50_UPI0001C164FC Two component Transcriptional regulator, ... 104 1e-21 UniRef50_D2BG66 DNA-binding response regulator, two-component sy... 104 1e-21 UniRef50_Q9F868 Sensory transduction protein regX3 n=47 Tax=Bact... 104 1e-21 UniRef50_B1HYB3 DNA-binding response regulator n=2 Tax=Bacillace... 104 1e-21 UniRef50_C0Z8X3 Two-component response regulator n=3 Tax=Firmicu... 103 2e-21 UniRef50_Q03GZ5 DNA-binding response regulator, OmpR family (Rec... 103 2e-21 UniRef50_Q21EC1 Two component transcriptional regulator, winged ... 103 2e-21 UniRef50_Q04N97 Response regulator n=6 Tax=Leptospira RepID=Q04N... 103 2e-21 UniRef50_C4L703 Two component transcriptional regulator, winged ... 103 2e-21 UniRef50_C6LDL3 DNA-binding response regulator YycF n=2 Tax=Firm... 103 2e-21 UniRef50_B8FYB6 Two component transcriptional regulator, winged ... 103 2e-21 UniRef50_B0TE19 Transcriptional regulator, putative n=1 Tax=Heli... 103 2e-21 UniRef50_C6VLR9 Response regulator n=52 Tax=Firmicutes RepID=C6V... 103 2e-21 UniRef50_C4L1R5 Two component transcriptional regulator, winged ... 102 3e-21 UniRef50_C8W6G9 Putative two component transcriptional regulator... 102 3e-21 UniRef50_B8I272 Two component transcriptional regulator, winged ... 102 3e-21 UniRef50_A5UYZ0 Two component transcriptional regulator, winged ... 102 3e-21 UniRef50_Q38WB3 Two component system, response regulator n=58 Ta... 102 3e-21 UniRef50_A3I5H1 DNA-binding response regulator n=2 Tax=Bacillace... 102 4e-21 UniRef50_P94413 Uncharacterized transcriptional regulatory prote... 102 4e-21 UniRef50_C4IFN3 Transcriptional regulator n=15 Tax=Bacteria RepI... 102 4e-21 UniRef50_D2LZ20 Two component transcriptional regulator, winged ... 102 4e-21 UniRef50_A1HRL8 Two component transcriptional regulator, winged ... 102 4e-21 UniRef50_C4W819 Two component transcriptional regulator, winged ... 102 4e-21 UniRef50_UPI000050FEDE response regulator receiver protein n=1 T... 102 4e-21 UniRef50_A1SKV6 Response regulator receiver n=7 Tax=Bacteria Rep... 102 5e-21 UniRef50_B5Y819 DNA-binding response regulator YycF n=1 Tax=Copr... 102 5e-21 UniRef50_Q63F03 Response regulator n=15 Tax=Firmicutes RepID=Q63... 101 5e-21 UniRef50_A5UPS1 Two component transcriptional regulator, winged ... 101 6e-21 UniRef50_Q892Y1 Alkaline phosphatase synthesis transcriptional r... 101 6e-21 UniRef50_A7ZAG8 MrsR2 n=2 Tax=Bacillus RepID=A7ZAG8_BACA2 101 6e-21 UniRef50_A8ZYB8 Two component transcriptional regulator, winged ... 101 7e-21 UniRef50_B3QW38 Two component transcriptional regulator, winged ... 101 8e-21 UniRef50_B7CCF4 Putative uncharacterized protein n=3 Tax=Firmicu... 101 8e-21 UniRef50_C8WP93 Two component transcriptional regulator, winged ... 101 8e-21 UniRef50_D0AFB3 Putative uncharacterized protein n=4 Tax=Firmicu... 101 8e-21 UniRef50_P72948 OmpR subfamily n=21 Tax=Bacteria RepID=P72948_SYNY3 101 8e-21 UniRef50_B1C9A4 Putative uncharacterized protein n=1 Tax=Anaerof... 101 8e-21 UniRef50_C7G9Y4 DNA-binding response regulator n=6 Tax=Bacteria ... 101 9e-21 UniRef50_C9YME3 Two-component response regulator n=32 Tax=Firmic... 100 9e-21 UniRef50_C6PZ92 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_A1Z6C8 Response regulator receiver n=1 Tax=Sulfobacillu... 100 1e-20 UniRef50_A9CWP6 Putative response regulator n=1 Tax=Shewanella b... 100 1e-20 UniRef50_B2A1Z8 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_B5YEK3 Response regulator DrrA n=5 Tax=Bacteria RepID=B... 100 1e-20 UniRef50_A9AYM0 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_Q488W3 DNA-binding response regulator n=3 Tax=Alteromon... 100 1e-20 UniRef50_A0KCT7 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_A7Z5A0 YvrH n=28 Tax=Firmicutes RepID=A7Z5A0_BACA2 100 2e-20 UniRef50_D1C683 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_C2E0K8 Response regulator PhoP n=9 Tax=Lactobacillus Re... 100 2e-20 UniRef50_Q1AZL3 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_Q0HYY3 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_A7B4Z9 Putative uncharacterized protein n=2 Tax=Ruminoc... 100 2e-20 UniRef50_D2RD26 Transcriptional regulatory protein, C-terminal d... 100 2e-20 UniRef50_UPI00017F4CF5 two-component response regulator n=2 Tax=... 99 3e-20 UniRef50_C0D8Y6 Putative uncharacterized protein n=3 Tax=Clostri... 99 3e-20 UniRef50_C6CSH8 Two component transcriptional regulator, winged ... 99 3e-20 UniRef50_P42244 Uncharacterized transcriptional regulatory prote... 99 3e-20 UniRef50_UPI0001692EE0 response regulator n=1 Tax=Paenibacillus ... 99 3e-20 UniRef50_C4Z0U9 Two-component system, OmpR family, phosphate reg... 99 3e-20 UniRef50_B4WRK5 Response regulator receiver domain protein n=1 T... 99 4e-20 UniRef50_D0MGG0 Two component transcriptional regulator, winged ... 99 4e-20 UniRef50_C3ALG3 Two-component response regulator n=5 Tax=Bacilla... 99 4e-20 UniRef50_Q97MA9 Response regulator (CheY domain, HTH domain) n=1... 99 4e-20 UniRef50_C6CSM8 Two component transcriptional regulator, winged ... 99 4e-20 UniRef50_C2W6L0 Two-component response regulator n=5 Tax=Firmicu... 99 4e-20 UniRef50_C6CZ95 Two component transcriptional regulator, winged ... 99 4e-20 UniRef50_B1JFX2 Two component transcriptional regulator, winged ... 99 5e-20 UniRef50_A0LVZ4 Two component transcriptional regulator, winged ... 99 5e-20 UniRef50_C9KN64 DNA-binding response regulator VicR n=2 Tax=Mits... 99 5e-20 UniRef50_B4U3Y8 Alkaline phosphatase synthesis transcriptional r... 99 5e-20 UniRef50_A0Y0H8 DNA-binding response regulator n=1 Tax=Alteromon... 99 5e-20 UniRef50_Q5WGW1 Two-component response regulator n=1 Tax=Bacillu... 99 5e-20 UniRef50_A5UT44 Two component transcriptional regulator, winged ... 99 6e-20 UniRef50_Q5WBT6 Two-component response regulator n=3 Tax=Bacilla... 98 6e-20 UniRef50_C0QG14 Response regulator, CheY-like receiver domain pr... 98 6e-20 UniRef50_C8WVL8 Two component transcriptional regulator, winged ... 98 6e-20 UniRef50_A9KR75 Two component transcriptional regulator, winged ... 98 6e-20 UniRef50_A8VSS8 Response regulator receiver protein n=1 Tax=Baci... 98 6e-20 UniRef50_Q3Z7C3 Transcriptional regulator, putative n=1 Tax=Deha... 98 8e-20 UniRef50_A9AXY0 Two component transcriptional regulator, winged ... 98 8e-20 UniRef50_C6PCZ0 Two component transcriptional regulator, winged ... 98 9e-20 UniRef50_Q7NGM9 Two-component response regulator n=1 Tax=Gloeoba... 98 9e-20 UniRef50_C6IXU0 Transcriptional regulator domain-containing prot... 98 9e-20 UniRef50_A9AWM9 Two component transcriptional regulator, winged ... 98 1e-19 UniRef50_P45606 Phosphate regulon transcriptional regulatory pro... 98 1e-19 UniRef50_C5D1A0 Two component transcriptional regulator, winged ... 98 1e-19 UniRef50_B4WME0 Response regulator receiver domain protein n=1 T... 98 1e-19 UniRef50_Q1AYG8 Two component transcriptional regulator, winged ... 98 1e-19 UniRef50_B8G223 Two component transcriptional regulator, winged ... 98 1e-19 UniRef50_D0WFD8 DNA-binding response regulator VicR n=1 Tax=Slac... 98 1e-19 UniRef50_Q67RH7 Two-component response regulator n=1 Tax=Symbiob... 98 1e-19 UniRef50_D1YA87 Transcriptional regulatory protein, C-terminal d... 98 1e-19 UniRef50_C6LD48 DNA-binding response regulator ResD n=1 Tax=Brya... 98 1e-19 UniRef50_D1CH01 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_C7ILM1 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_A9BR19 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_B2A0K7 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_C7M2G6 Putative two component transcriptional regulator... 97 2e-19 UniRef50_B2V3E9 Transcriptional regulatory protein ResD n=5 Tax=... 97 2e-19 UniRef50_A6LVN5 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_Q01RV3 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_B0MNE2 Putative uncharacterized protein n=3 Tax=Firmicu... 97 2e-19 UniRef50_Q01T10 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_Q2JED0 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_Q0AWC5 Response regulator receiver protein n=1 Tax=Synt... 97 2e-19 UniRef50_C5CFK4 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_C0W5Y5 Response regulator n=1 Tax=Actinomyces urogenita... 97 2e-19 UniRef50_Q67J79 Two-component response regulator, CheY-like n=1 ... 97 2e-19 UniRef50_A8MLN3 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_A8MFP9 Two component transcriptional regulator, winged ... 96 2e-19 UniRef50_C8PCG6 DNA-binding response regulator n=1 Tax=Lactobaci... 96 2e-19 UniRef50_A6LQJ3 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_C7N7D7 Response regulator with CheY-like receiver domai... 96 3e-19 UniRef50_B0MRC9 Putative uncharacterized protein n=1 Tax=Eubacte... 96 3e-19 UniRef50_A4X1M5 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_Q3A924 DNA-binding response regulator n=3 Tax=Bacteria ... 96 3e-19 UniRef50_C0GHG5 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_UPI0001C421AD two-component response regulator n=1 Tax=... 96 3e-19 UniRef50_Q897D5 Two-component response regulator n=8 Tax=Clostri... 96 3e-19 UniRef50_Q067N9 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_C2EBW1 Two-component response regulator n=1 Tax=Lactoba... 96 4e-19 UniRef50_C7MNN6 Response regulator with CheY-like receiver domai... 96 4e-19 UniRef50_B0S1J7 Two-component response regulator n=16 Tax=Clostr... 96 4e-19 UniRef50_A6BHI5 Putative uncharacterized protein n=1 Tax=Dorea l... 96 4e-19 UniRef50_A7HL55 Two component transcriptional regulator, winged ... 96 4e-19 UniRef50_B0TDB2 Two-component response regulator n=3 Tax=Bacteri... 96 4e-19 UniRef50_A1SN97 Response regulator receiver n=41 Tax=Bacteria Re... 96 5e-19 UniRef50_B0NH75 Putative uncharacterized protein n=1 Tax=Clostri... 96 5e-19 UniRef50_A7WWQ5 Transcriptional regulatory protein walR n=685 Ta... 96 5e-19 UniRef50_C7I0W4 Two component transcriptional regulator, winged ... 96 5e-19 UniRef50_A6X2C4 Two component transcriptional regulator, winged ... 96 5e-19 UniRef50_B6FPY5 Putative uncharacterized protein (Fragment) n=1 ... 95 5e-19 UniRef50_C7N0N0 Response regulator with CheY-like receiver domai... 95 5e-19 UniRef50_D1CA41 Two component transcriptional regulator, winged ... 95 5e-19 UniRef50_B5JD22 Response regulator receiver domain protein n=1 T... 95 5e-19 UniRef50_UPI00017890B9 putative two component transcriptional re... 95 5e-19 UniRef50_A6LXP4 Two component transcriptional regulator, winged ... 95 5e-19 UniRef50_A9KHT5 Two component transcriptional regulator, winged ... 95 6e-19 UniRef50_A5V0J0 Two component transcriptional regulator, winged ... 95 6e-19 UniRef50_UPI0001C379A1 regulatory protein VanR n=1 Tax=Ruminococ... 95 6e-19 UniRef50_C0D765 Putative uncharacterized protein n=1 Tax=Clostri... 95 6e-19 UniRef50_Q5SMC3 Response regulator n=4 Tax=Deinococci RepID=Q5SM... 95 6e-19 UniRef50_A9VV65 Two component transcriptional regulator, winged ... 95 6e-19 UniRef50_C6C1C7 Two component transcriptional regulator, winged ... 95 6e-19 UniRef50_C6D6P8 Two component transcriptional regulator, winged ... 95 6e-19 UniRef50_B9YDA4 Putative uncharacterized protein n=1 Tax=Holdema... 95 7e-19 UniRef50_B0N9X7 Putative uncharacterized protein n=2 Tax=Clostri... 95 7e-19 UniRef50_Q24Q12 Putative uncharacterized protein n=1 Tax=Desulfi... 95 7e-19 UniRef50_UPI0001C425A1 two component transcriptional regulator, ... 95 7e-19 UniRef50_Q1J251 Two component transcriptional regulator PhoB n=5... 95 7e-19 UniRef50_C6D5Y8 Putative two component transcriptional regulator... 95 7e-19 UniRef50_C7TA80 Two-component response regulator n=2 Tax=Lactoba... 95 8e-19 UniRef50_C0CI50 Putative uncharacterized protein n=1 Tax=Blautia... 95 8e-19 UniRef50_D1C280 Two component transcriptional regulator, winged ... 95 8e-19 UniRef50_A5WBW4 Two component transcriptional regulator, winged ... 94 9e-19 UniRef50_C7N7W6 Response regulator with CheY-like receiver domai... 94 9e-19 UniRef50_A8SR47 Putative uncharacterized protein n=2 Tax=Clostri... 94 9e-19 UniRef50_C4G2P7 Putative uncharacterized protein n=1 Tax=Abiotro... 94 9e-19 UniRef50_D1PMF3 DNA-binding response regulator RegX3 n=3 Tax=Clo... 94 9e-19 UniRef50_Q3Z7F8 Transcriptional regulator n=5 Tax=Dehalococcoide... 94 9e-19 UniRef50_B1XM84 Two-component response regulator n=8 Tax=Cyanoba... 94 1e-18 UniRef50_Q1K367 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_Q02A31 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_B6FYV2 Putative uncharacterized protein n=1 Tax=Clostri... 94 1e-18 UniRef50_C2EDI8 Response regulator n=11 Tax=Firmicutes RepID=C2E... 94 1e-18 UniRef50_C4IAX3 DNA-binding response regulator n=1 Tax=Clostridi... 94 1e-18 UniRef50_A7ICZ4 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_B1YFK7 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_C5D2L7 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_A7HMZ4 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_A9BP99 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_Q38YC7 Two-component system, response regulator (Possib... 94 1e-18 UniRef50_B2TJI4 Regulatory protein VanR n=4 Tax=Clostridiales Re... 94 1e-18 UniRef50_C1YUF6 Response regulator with CheY-like receiver domai... 94 1e-18 UniRef50_Q0RNB1 Putative response regulator (Response regulator ... 94 1e-18 UniRef50_Q12T20 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_Q1J3D6 Two component transcriptional regulator, winged ... 94 2e-18 UniRef50_C7T954 Two-component response regulator n=10 Tax=Lactob... 94 2e-18 UniRef50_Q3AEH2 DNA-binding response regulator n=1 Tax=Carboxydo... 94 2e-18 UniRef50_Q2SPE2 Response regulator consisting of a CheY-like rec... 94 2e-18 UniRef50_Q3DDJ6 Phosphate regulon response regulator PhoB n=11 T... 94 2e-18 UniRef50_B1YJZ1 Two component transcriptional regulator, winged ... 94 2e-18 UniRef50_C7H5J1 Two-component system response regulator (Fragmen... 94 2e-18 UniRef50_B8IVD0 Two component transcriptional regulator, winged ... 94 2e-18 UniRef50_Q5HR28 Response regulator saeR n=60 Tax=Staphylococcus ... 93 2e-18 UniRef50_A9WLJ1 Two-component response regulator n=4 Tax=Actinom... 93 2e-18 UniRef50_C1D266 Putative response regulator, OmpR n=1 Tax=Deinoc... 93 2e-18 UniRef50_A7GIT8 DNA-binding response regulator n=11 Tax=Clostrid... 93 2e-18 UniRef50_A5ZNL8 Putative uncharacterized protein n=3 Tax=Ruminoc... 93 2e-18 UniRef50_B1ZTF2 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_A4IPQ9 DNA-binding response regulator n=16 Tax=Bacillal... 93 2e-18 UniRef50_B8CXQ9 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_C7NFF7 Response regulator with CheY-like receiver domai... 93 2e-18 UniRef50_C2H8S4 Response regulator n=8 Tax=Enterococcus RepID=C2... 93 2e-18 UniRef50_B6WUI4 Putative uncharacterized protein n=1 Tax=Desulfo... 93 2e-18 UniRef50_C8WK97 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_D1BPS5 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_B8HQE6 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_B7K7W8 Multi-component transcriptional regulator, winge... 93 3e-18 UniRef50_D1BL25 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_B2G959 Two-component response regulator n=13 Tax=Lactob... 93 3e-18 UniRef50_UPI000196AEE3 hypothetical protein CATMIT_00609 n=1 Tax... 93 3e-18 UniRef50_B5I213 Regulatory protein n=3 Tax=Streptomyces RepID=B5... 93 3e-18 UniRef50_D0WJB9 Transcriptional regulator n=1 Tax=Slackia exigua... 93 3e-18 UniRef50_A7K1J9 DNA-binding response regulator n=13 Tax=Vibriona... 93 3e-18 UniRef50_Q026B5 Two component heavy metal response transcription... 93 3e-18 UniRef50_A6LXW1 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_A6TM13 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_B3E8G4 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_A6LXL2 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_A4XGM2 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_Q2S514 Response regulator DrrA n=3 Tax=Rhodothermaceae ... 92 3e-18 UniRef50_A7GA24 DNA-binding response regulator n=10 Tax=Clostrid... 92 3e-18 UniRef50_Q04AR8 DNA-binding response regulator, OmpR family (Rec... 92 3e-18 UniRef50_B2GF54 Two-component response regulator n=14 Tax=Lactob... 92 3e-18 UniRef50_C6LJU9 Two-component response regulator for energy tran... 92 3e-18 UniRef50_C8WRL2 Two component transcriptional regulator, winged ... 92 3e-18 UniRef50_C6J6L0 Response regulator n=2 Tax=Bacillales RepID=C6J6... 92 3e-18 UniRef50_Q1DCL7 DNA-binding response regulator n=6 Tax=Cystobact... 92 3e-18 UniRef50_P0AA18 Transcriptional regulatory protein ompR n=242 Ta... 92 4e-18 UniRef50_D1C5Q5 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_C7N192 Response regulator with CheY-like receiver domai... 92 4e-18 UniRef50_Q49ZT8 Heme response regulator hssR n=7 Tax=Staphylococ... 92 4e-18 UniRef50_C7NAQ8 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_B0TCF4 Two-component response regulator resd n=4 Tax=Fi... 92 4e-18 UniRef50_C6QDD0 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_C4L0X3 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_A4AL32 Putative two-component system response regulator... 92 4e-18 UniRef50_B1YK44 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_C0WUJ3 Response regulator n=3 Tax=Lactobacillus RepID=C... 92 4e-18 UniRef50_B9CPY7 DNA-binding response regulator n=3 Tax=Staphyloc... 92 4e-18 UniRef50_C7N5H9 Response regulator with CheY-like receiver domai... 92 4e-18 UniRef50_Q2SL72 Response regulator consisting of a CheY-like rec... 92 5e-18 UniRef50_Q21DY6 Phosphate regulon transcriptional regulatory pro... 92 5e-18 UniRef50_A9G6M8 Two-component response regulator n=1 Tax=Sorangi... 92 5e-18 UniRef50_B9XFI9 Two component transcriptional regulator, winged ... 92 5e-18 UniRef50_B9XEM3 Two component transcriptional regulator, winged ... 92 5e-18 UniRef50_A5IKU4 Two component transcriptional regulator, winged ... 92 5e-18 UniRef50_B1YEH2 Two component transcriptional regulator, winged ... 92 5e-18 UniRef50_C0X3L2 Response regulator n=22 Tax=Enterococcus faecali... 92 5e-18 UniRef50_B0G6A2 Putative uncharacterized protein n=2 Tax=Lachnos... 92 5e-18 UniRef50_Q8VTU3 Putative response regulator RR23 n=1 Tax=Listeri... 92 5e-18 UniRef50_Q4ZQ24 Response regulator receiver:Transcriptional regu... 92 5e-18 UniRef50_C9LC31 Regulatory protein VanR n=1 Tax=Blautia hansenii... 92 5e-18 UniRef50_UPI0001AEBD7C two component transcriptional regulator n... 92 5e-18 UniRef50_Q4ZUU7 Response regulator receiver:Transcriptional regu... 92 6e-18 UniRef50_B8FLX7 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_A6LZK7 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_Q2FY79 Transcriptional regulatory protein srrA n=168 Ta... 92 6e-18 UniRef50_Q894P5 Transcriptional regulatory protein n=4 Tax=Clost... 92 6e-18 UniRef50_B3DZZ9 DNA-binding response regulator, OmpR family (REC... 92 6e-18 UniRef50_A8SVV6 Putative uncharacterized protein n=1 Tax=Coproco... 92 6e-18 UniRef50_Q5WKN6 Two-component response regulator n=2 Tax=Firmicu... 92 6e-18 UniRef50_B1WRX4 Two component transcriptional regulator n=11 Tax... 92 6e-18 UniRef50_B2TJU3 Regulatory protein VanR n=9 Tax=Firmicutes RepID... 92 6e-18 UniRef50_C7H3Q1 KDP operon transcriptional regulatory protein Kd... 92 6e-18 UniRef50_A5N471 VanR n=21 Tax=Bacteria RepID=A5N471_CLOK5 92 7e-18 UniRef50_B1ZQC8 Two component transcriptional regulator, winged ... 92 7e-18 UniRef50_A4FEZ3 Two-component response regulator n=4 Tax=Bacteri... 92 7e-18 UniRef50_B8G869 Two component transcriptional regulator, winged ... 91 7e-18 UniRef50_C9XSY6 Two-component response regulator n=15 Tax=Firmic... 91 8e-18 UniRef50_C6IVK1 Response regulator (Fragment) n=1 Tax=Paenibacil... 91 8e-18 UniRef50_D2LY16 Two component transcriptional regulator, winged ... 91 8e-18 UniRef50_A7X5Y5 Heme response regulator hssR n=71 Tax=Bacillales... 91 8e-18 UniRef50_C9XR57 Two-component response regulator n=11 Tax=Clostr... 91 8e-18 UniRef50_Q2BM87 DNA-binding response regulator n=1 Tax=Neptuniib... 91 8e-18 UniRef50_Q2JPV2 DNA-binding response regulator n=17 Tax=Bacteria... 91 8e-18 UniRef50_Q26IA7 Transcriptional regulatory protein n=3 Tax=Bacte... 91 8e-18 UniRef50_Q5KTV1 Putative uncharacterized protein n=1 Tax=Staphyl... 91 8e-18 UniRef50_B8FS97 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_B7K5A2 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_D0LUI4 Putative two component transcriptional regulator... 91 9e-18 UniRef50_A5WB94 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_B1XXD9 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_D1VIP6 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_B2TJG9 Regulatory protein VanR n=6 Tax=Firmicutes RepID... 91 1e-17 UniRef50_Q2RUW2 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_A4CEI9 Transcriptional regulatory protein RstA n=3 Tax=... 91 1e-17 UniRef50_B1WXJ7 Two-component response regulator n=2 Tax=Chrooco... 91 1e-17 UniRef50_Q01YI3 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_A5CZK5 Response regulator n=3 Tax=Clostridiales RepID=A... 91 1e-17 UniRef50_C5D3X1 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_A9AVR8 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_B1IEF4 Regulatory protein VanR n=17 Tax=Firmicutes RepI... 91 1e-17 UniRef50_C4L340 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_C1SP47 Response regulator with CheY-like receiver domai... 91 1e-17 UniRef50_Q186H9 Two-component response regulator n=28 Tax=Bacter... 91 1e-17 UniRef50_Q2S085 Response regulator DrrA n=1 Tax=Salinibacter rub... 91 1e-17 UniRef50_Q2N765 DNA-binding response regulator n=8 Tax=Proteobac... 91 1e-17 UniRef50_C7N1J8 Response regulator with CheY-like receiver domai... 91 1e-17 UniRef50_A0PYF5 Two-component response regulator n=8 Tax=Firmicu... 91 1e-17 UniRef50_A8DJW5 Transcriptional regulatory protein n=1 Tax=Candi... 91 1e-17 UniRef50_A6NWH9 Putative uncharacterized protein n=2 Tax=Bactero... 91 1e-17 UniRef50_D2SFJ3 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_B2A8D5 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_A6TKQ5 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_A4J2J4 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_C6VZ09 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_C9KL69 DNA-binding response regulator ArlR n=1 Tax=Mits... 91 2e-17 UniRef50_D0MGI0 Two component transcriptional regulator, winged ... 91 2e-17 UniRef50_C9ZHF5 Putative regulatory protein n=6 Tax=Streptomyces... 91 2e-17 UniRef50_B1C9W9 Putative uncharacterized protein n=1 Tax=Anaerof... 90 2e-17 UniRef50_C8QI30 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_Q0SQL4 Two-component response regulator n=10 Tax=Firmic... 90 2e-17 UniRef50_D1U371 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_C0WE14 Two-component system transcriptional regulator n... 90 2e-17 UniRef50_Q182M4 Two-component response regulator n=14 Tax=Clostr... 90 2e-17 UniRef50_Q2SNE0 Response regulator consisting of a CheY-like rec... 90 2e-17 UniRef50_C0C3P9 Putative uncharacterized protein n=1 Tax=Clostri... 90 2e-17 UniRef50_D1CG76 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_B8G179 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_B3WB53 Response regulator n=35 Tax=Bacilli RepID=B3WB53... 90 2e-17 UniRef50_A6LVA4 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_C8X3Y5 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_C0D2V9 Putative uncharacterized protein n=1 Tax=Clostri... 90 2e-17 UniRef50_UPI0001C42B3F two component transcriptional regulator, ... 90 2e-17 UniRef50_A9VUJ1 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_Q2JAC4 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_D0WLW8 DNA-binding response regulator RegX3 n=1 Tax=Act... 90 2e-17 UniRef50_C6MYB5 DNA-binding response regulator n=2 Tax=Legionell... 90 2e-17 UniRef50_B7ILX3 DNA-binding response regulator n=102 Tax=Firmicu... 90 2e-17 UniRef50_B1KWY3 DNA-binding response regulator n=33 Tax=Firmicut... 90 2e-17 UniRef50_UPI000050FA0F putative two-component system response re... 90 2e-17 UniRef50_C7LSY9 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_C0WM98 Possible response regulator n=3 Tax=Lactobacillu... 90 2e-17 UniRef50_A4EGJ5 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_A0LPJ2 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_UPI0001C31E43 two component transcriptional regulator, ... 90 2e-17 UniRef50_C4KB06 Two component transcriptional regulator, winged ... 90 3e-17 UniRef50_C7H8D4 Two-component response regulator n=12 Tax=Bacter... 90 3e-17 UniRef50_B8DS40 Two component transcriptional regulator, winged ... 90 3e-17 UniRef50_A1SYE4 Two component transcriptional regulator, winged ... 90 3e-17 UniRef50_A7GEN9 DNA-binding response regulator n=18 Tax=Firmicut... 90 3e-17 UniRef50_A6G9H9 Two-component response regulator n=1 Tax=Plesioc... 90 3e-17 UniRef50_Q0IC97 DNA-binding response regulator n=3 Tax=Synechoco... 89 3e-17 UniRef50_C3RMH7 Signal transduction regulator n=8 Tax=Bacteria R... 89 3e-17 UniRef50_A9G298 Two-component response regulator n=1 Tax=Sorangi... 89 3e-17 UniRef50_A8GAJ9 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_Q04VZ3 Response regulator n=6 Tax=Leptospira RepID=Q04V... 89 3e-17 UniRef50_A8ZSJ7 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_C1ZG07 Response regulator with CheY-like receiver domai... 89 3e-17 UniRef50_Q3A7S2 Putative two component response regulator n=1 Ta... 89 3e-17 UniRef50_C1XS75 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_C6D0P6 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_B8G7R1 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_B7JEB2 Alkaline phosphatase synthesis transcriptional r... 89 3e-17 UniRef50_B0C620 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_B8JG70 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_Q3KAS5 Two-component system, response regulator n=2 Tax... 89 3e-17 UniRef50_C4Z7A3 Two-component system, OmpR family, response regu... 89 3e-17 UniRef50_A1U3N6 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_A4SZ97 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_C1I3L5 Alkaline phosphatase synthesis transcriptional r... 89 3e-17 UniRef50_C0BXI5 Putative uncharacterized protein n=2 Tax=Clostri... 89 3e-17 UniRef50_Q3K1Z3 DNA-binding response regulator n=9 Tax=Bacteria ... 89 4e-17 UniRef50_C9XMT9 Two-component response regulator n=94 Tax=Bacter... 89 4e-17 UniRef50_B9E984 Putative uncharacterized protein n=1 Tax=Macroco... 89 4e-17 UniRef50_C7I0A5 Two component transcriptional regulator PhoB, wi... 89 4e-17 UniRef50_Q8ESP1 Two-component response regulator n=1 Tax=Oceanob... 89 4e-17 UniRef50_A0RK71 DNA-binding response regulator n=69 Tax=Bacillus... 89 4e-17 UniRef50_C7IFX1 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_Q07HV3 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_A9AYH1 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_Q1LHM7 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_C9RLA0 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_B0CFF1 Two-component transcriptional regulator n=7 Tax=... 89 4e-17 UniRef50_B8I717 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_UPI0001C35F78 two-component response regulator n=1 Tax=... 89 4e-17 UniRef50_A5N716 Transcriptional regulator n=15 Tax=Firmicutes Re... 89 4e-17 UniRef50_P54443 Uncharacterized transcriptional regulatory prote... 89 4e-17 UniRef50_UPI0001B559F0 two-component system, response regulator ... 89 4e-17 UniRef50_A1B7Z0 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_P45189 Phosphate regulon transcriptional regulatory pro... 89 4e-17 UniRef50_B6BN62 Two-component system response regulator n=1 Tax=... 89 5e-17 UniRef50_A5VEY8 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_O34903 Uncharacterized transcriptional regulatory prote... 89 5e-17 UniRef50_C5ENX8 Two-component response regulator n=2 Tax=Clostri... 89 5e-17 UniRef50_C9YCY7 Transcriptional regulatory protein ompR n=1 Tax=... 89 5e-17 UniRef50_Q2T1W7 DNA-binding response regulator n=22 Tax=Proteoba... 89 5e-17 UniRef50_B8H4H9 Two-component response regulator protein n=9 Tax... 89 5e-17 UniRef50_Q2SHD7 Probable transcriptional regulator n=1 Tax=Hahel... 89 5e-17 UniRef50_Q02BS1 Response regulator receiver protein n=1 Tax=Cand... 89 6e-17 UniRef50_C2V3X6 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_Q1GXN5 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_C6NV64 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_Q0ASG1 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_C2D6V6 Possible response regulator n=1 Tax=Atopobium va... 88 6e-17 UniRef50_A5G0J5 Two component transcriptional regulator, winged ... 88 6e-17 UniRef50_B2IIX2 Two component transcriptional regulator, winged ... 88 6e-17 UniRef50_C9XRL7 Two-component response regulator n=4 Tax=Clostri... 88 6e-17 UniRef50_B8DZ94 Two component transcriptional regulator, winged ... 88 6e-17 UniRef50_A3CKZ7 Two-component response transcriptional regulator... 88 6e-17 UniRef50_D2MMT6 Putative regulatory protein VanR n=1 Tax=Bulleid... 88 6e-17 UniRef50_Q1GLX1 Two component transcriptional regulator, winged ... 88 6e-17 UniRef50_A0L7S7 Two component transcriptional regulator, winged ... 88 6e-17 UniRef50_C7NK44 Response regulator with CheY-like receiver domai... 88 7e-17 UniRef50_B4WSE4 Response regulator receiver domain protein n=1 T... 88 7e-17 UniRef50_B8FQL7 Two component transcriptional regulator, winged ... 88 7e-17 UniRef50_B7CCX3 Putative uncharacterized protein n=1 Tax=Eubacte... 88 7e-17 UniRef50_O78428 Probable transcriptional regulator ycf27 n=18 Ta... 88 7e-17 UniRef50_C6CWW2 Two component transcriptional regulator, winged ... 88 7e-17 UniRef50_A0RCN7 Two-component response regulator n=65 Tax=Bacill... 88 7e-17 UniRef50_A9BP07 Two component transcriptional regulator, winged ... 88 7e-17 UniRef50_A5UWJ8 Two component transcriptional regulator, winged ... 88 7e-17 UniRef50_Q0F0D6 Response regulator in two-component regulatory s... 88 7e-17 UniRef50_Q6F7B5 Two-component response regulator n=55 Tax=Bacter... 88 7e-17 UniRef50_A6TT79 Two component transcriptional regulator, winged ... 88 7e-17 UniRef50_C3RJ29 Response regulator gtcR n=2 Tax=Bacteria RepID=C... 88 7e-17 UniRef50_Q3A190 Two component signal transduction response regul... 88 8e-17 UniRef50_B1Y714 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_A0LU58 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_C0Z5U8 Two-component response regulator n=3 Tax=Firmicu... 88 8e-17 UniRef50_B1QW07 Regulatory protein VanR n=6 Tax=Clostridiales Re... 88 8e-17 UniRef50_A0YP32 Two-component response regulator n=1 Tax=Lyngbya... 88 8e-17 UniRef50_B4U9Z2 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_B2V706 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_D2M1X4 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_A6M0T3 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_C7PII2 Two component transcriptional regulator, winged ... 88 9e-17 UniRef50_C4Z2E0 Two-component system, OmpR family, phosphate reg... 88 9e-17 UniRef50_A6TL65 Two component transcriptional regulator, winged ... 88 9e-17 UniRef50_P0A5Z5 DNA-binding response regulator mtrA n=76 Tax=Bac... 88 9e-17 UniRef50_B8HDW6 Two component transcriptional regulator, winged ... 88 9e-17 UniRef50_Q5NY91 Response regulator n=1 Tax=Aromatoleum aromaticu... 88 9e-17 UniRef50_A9KP45 Two component transcriptional regulator, winged ... 88 9e-17 UniRef50_D0WIB8 DNA-binding response regulator VicR n=1 Tax=Slac... 88 9e-17 UniRef50_Q188S4 Putative lantibiotic resistance two-component re... 88 9e-17 UniRef50_A6CG62 Two-component response regulator n=1 Tax=Plancto... 88 9e-17 UniRef50_Q251C7 Putative uncharacterized protein n=1 Tax=Desulfi... 88 9e-17 UniRef50_A9ASF4 Two component transcriptional regulator, winged ... 88 9e-17 UniRef50_D1CC84 Two component transcriptional regulator, winged ... 88 9e-17 UniRef50_Q9KAM3 Two-component response regulator n=1 Tax=Bacillu... 88 1e-16 UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein ... 88 1e-16 UniRef50_Q4HSL5 Phosphate regulon response regulator PhoB n=3 Ta... 88 1e-16 UniRef50_D2QGK1 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_Q01N64 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_C6LEL9 DNA-binding response regulator RegX3 n=3 Tax=Clo... 88 1e-16 UniRef50_Q189I8 Two-component response regulator n=5 Tax=Clostri... 88 1e-16 UniRef50_B8FI17 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_A9KM61 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_A7BB43 Putative uncharacterized protein n=2 Tax=Actinom... 88 1e-16 UniRef50_A6FSM2 Probable two-component response regulator protei... 87 1e-16 UniRef50_UPI0001C36ECD response regulator n=1 Tax=Ruminococcus f... 87 1e-16 UniRef50_B6FSP5 Putative uncharacterized protein n=1 Tax=Clostri... 87 1e-16 UniRef50_C8PDN3 DNA-binding response regulator n=1 Tax=Lactobaci... 87 1e-16 UniRef50_D2LRZ5 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_Q52990 Phosphate regulon transcriptional regulatory pro... 87 1e-16 UniRef50_C9RRV7 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_C6BIK6 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_Q03AM3 DNA-binding response regulator, OmpR family (Rec... 87 1e-16 UniRef50_B2JBG7 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_D0KWS3 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_A6L7N3 Two-component system response regulator n=9 Tax=... 87 1e-16 UniRef50_UPI0001C37170 two component transcriptional regulator, ... 87 1e-16 UniRef50_C7H3P4 DNA-binding response regulator SrrA n=1 Tax=Faec... 87 1e-16 UniRef50_B1VIL1 Two-component system response regulator n=3 Tax=... 87 1e-16 UniRef50_A6WIX6 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_A9KGK4 Phosphate regulon transcriptional regulatory pro... 87 1e-16 UniRef50_D1XII5 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_C5VNC3 Alkaline phosphatase synthesis transcriptional r... 87 1e-16 UniRef50_UPI0001C32387 two component transcriptional regulator, ... 87 1e-16 UniRef50_B0P738 Putative uncharacterized protein n=1 Tax=Anaerot... 87 1e-16 UniRef50_Q3AVF0 Response regulator receiver domain protein (CheY... 87 1e-16 UniRef50_C5QMK0 Hemin DNA-binding response regulator n=3 Tax=Bac... 87 1e-16 UniRef50_A4E8P8 Putative uncharacterized protein n=3 Tax=Collins... 87 1e-16 UniRef50_A4FNN5 Response regulator, two-component system n=12 Ta... 87 1e-16 UniRef50_C2Z9H3 DNA-binding response regulator n=4 Tax=Bacillace... 87 2e-16 UniRef50_C4FAP3 Putative uncharacterized protein n=3 Tax=Bacteri... 87 2e-16 UniRef50_Q44006 Transcriptional activator protein czcR n=330 Tax... 87 2e-16 UniRef50_Q030C5 DNA-binding response regulator, OmpR family (Rec... 87 2e-16 UniRef50_C0ZDC3 Two-component response regulator n=1 Tax=Breviba... 87 2e-16 UniRef50_Q1NA75 DNA-binding response regulator n=3 Tax=Alphaprot... 87 2e-16 UniRef50_Q06239 Regulatory protein vanR n=26 Tax=Firmicutes RepI... 87 2e-16 UniRef50_D2LRZ1 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_A6CDX9 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_B8GBX2 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_Q2IGB7 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_D1VK99 Putative two component transcriptional regulator... 87 2e-16 UniRef50_C9L5Y5 Regulatory protein VanR n=1 Tax=Blautia hansenii... 87 2e-16 UniRef50_B4CW77 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_C6RFL7 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_A6W3G3 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_B9CKZ5 Transcriptional regulator domain protein n=2 Tax... 87 2e-16 UniRef50_C3WCS3 Two-component system response regulator n=4 Tax=... 87 2e-16 UniRef50_C4LLE8 Two-component system, response regulator n=19 Ta... 87 2e-16 UniRef50_P35163 Transcriptional regulatory protein resD n=162 Ta... 87 2e-16 UniRef50_P52108 Transcriptional regulatory protein rstA n=163 Ta... 87 2e-16 UniRef50_B2V7Q1 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_B0TXI9 Response regulator receiver protein n=14 Tax=Fra... 87 2e-16 UniRef50_UPI0001C424C1 hypothetical protein BpOF4_12950 n=1 Tax=... 87 2e-16 UniRef50_UPI0001C355EA transcriptional regulator n=1 Tax=Clostri... 87 2e-16 UniRef50_UPI000196BAD1 hypothetical protein CATMIT_00504 n=1 Tax... 87 2e-16 UniRef50_C8WJL3 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_C7LY45 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_B0G2J4 Putative uncharacterized protein n=1 Tax=Dorea f... 87 2e-16 UniRef50_P51358 Probable transcriptional regulator ycf27 n=96 Ta... 87 2e-16 UniRef50_B1VZK5 Putative transcriptional regulator n=8 Tax=Strep... 87 2e-16 UniRef50_B4WSX3 Response regulator receiver domain protein n=1 T... 87 2e-16 UniRef50_Q47744 Regulatory protein vanRB n=13 Tax=Bacteria RepID... 87 2e-16 UniRef50_UPI00016B25CE two component transcriptional regulator, ... 87 2e-16 UniRef50_B1ZLF1 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_A5UQY1 Two component transcriptional regulator, winged ... 86 2e-16 UniRef50_P69229 Transcriptional regulatory protein baeR n=214 Ta... 86 2e-16 UniRef50_D1BX45 Two component transcriptional regulator, winged ... 86 2e-16 UniRef50_UPI0001C318D2 two component transcriptional regulator, ... 86 2e-16 UniRef50_B9L1T3 Phosphate regulatory protein n=1 Tax=Thermomicro... 86 2e-16 UniRef50_A1ULT5 Two component transcriptional regulator, winged ... 86 2e-16 UniRef50_C0ZH45 Two-component response regulator n=2 Tax=Bacilla... 86 2e-16 UniRef50_B8HEE3 Two component transcriptional regulator, winged ... 86 2e-16 UniRef50_B2TMR2 Transcriptional regulatory protein ResD n=1 Tax=... 86 2e-16 UniRef50_Q07HK8 Two component transcriptional regulator, winged ... 86 2e-16 UniRef50_C6JBE6 Putative uncharacterized protein n=1 Tax=Ruminoc... 86 2e-16 UniRef50_C8WRL6 Two component transcriptional regulator, winged ... 86 2e-16 UniRef50_Q0TNL1 DNA-binding response regulator n=8 Tax=Clostridi... 86 3e-16 UniRef50_C0CKG8 Putative uncharacterized protein n=1 Tax=Blautia... 86 3e-16 UniRef50_B3DXI2 Phosphate regulon transcriptional regulatory pro... 86 3e-16 UniRef50_D1VT61 Regulatory protein VanR n=1 Tax=Peptoniphilus la... 86 3e-16 UniRef50_Q21BK9 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_A5N8U3 Transcriptional regulator n=3 Tax=Clostridium Re... 86 3e-16 UniRef50_B0G7M7 Putative uncharacterized protein n=2 Tax=Clostri... 86 3e-16 UniRef50_C4ZP42 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_C0BVZ7 Putative uncharacterized protein n=2 Tax=Clostri... 86 3e-16 UniRef50_Q8RBP2 Response regulators consisting of a CheY-like re... 86 3e-16 UniRef50_C8PVM6 Putative transcriptional regulator OmpR n=1 Tax=... 86 3e-16 UniRef50_C6NVH5 Phosphate regulon transcriptional regulatory pro... 86 3e-16 UniRef50_C7TGP3 Two-component response regulator n=8 Tax=Lactoba... 86 3e-16 UniRef50_P0A5Z7 Transcriptional regulatory protein prrA n=41 Tax... 86 3e-16 UniRef50_A5WHF9 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_C7N3P1 Response regulator with CheY-like receiver domai... 86 3e-16 UniRef50_A1VI78 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_Q01RB2 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_B0TF57 Transcriptional regulator, putative n=1 Tax=Heli... 86 3e-16 UniRef50_A0L527 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_C9LLD5 DNA-binding response regulator ResD n=1 Tax=Dial... 86 3e-16 UniRef50_C3X860 Response regulator receiver protein n=2 Tax=Oxal... 86 3e-16 UniRef50_Q1GKH2 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_Q1CZP3 DNA-binding reponse regulator n=2 Tax=Myxococcal... 86 3e-16 UniRef50_C7LNV6 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_Q47ZA2 DNA-binding response regulator n=20 Tax=Alteromo... 86 4e-16 UniRef50_B5EQN9 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_UPI00016988BE Two component Transcriptional regulator, ... 86 4e-16 UniRef50_UPI0001C3717E DNA-binding response regulator n=1 Tax=Ru... 86 4e-16 UniRef50_D0LLH3 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_UPI00019732E7 DNA-binding response regulator n=1 Tax=Cl... 86 4e-16 UniRef50_Q1AXX7 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_B1ZTF3 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_C4L1Q9 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_B7JF46 DNA-binding response regulator n=87 Tax=Bacteria... 86 4e-16 UniRef50_C1SGQ1 Response regulator with CheY-like receiver domai... 86 4e-16 UniRef50_A5F0A5 Transcriptional regulator n=77 Tax=Proteobacteri... 86 4e-16 UniRef50_C6HUL5 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_D0SP77 Phosphate regulon transcriptional regulatory pro... 86 4e-16 UniRef50_C8P1C0 Regulatory protein VanR n=1 Tax=Erysipelothrix r... 86 4e-16 UniRef50_Q1NHM9 DNA-binding response regulator n=1 Tax=Sphingomo... 86 4e-16 UniRef50_B6ITF9 TorCAD operon transcriptional regulatory protein... 86 4e-16 UniRef50_A1VB66 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_UPI0001B9ECAC two component transcriptional regulator, ... 86 4e-16 UniRef50_B2TIW8 Alkaline phosphatase synthesis transcriptional r... 86 4e-16 UniRef50_A8VQC0 Response regulator receiver protein n=2 Tax=Baci... 86 5e-16 UniRef50_B1HXG4 DNA-binding response regulator n=2 Tax=Bacillace... 86 5e-16 UniRef50_C4ZFF8 DNA-binding response regulator n=60 Tax=Bacteria... 86 5e-16 UniRef50_A8F5U3 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_B2IER4 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_B4U9M6 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_A1R850 DNA-binding response regulator n=45 Tax=Actinoba... 86 5e-16 UniRef50_A4CE30 Probable two-component response regulator transc... 86 5e-16 UniRef50_Q398T9 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_Q46TX9 Response regulator receiver:Transcriptional regu... 86 5e-16 UniRef50_A9AXT6 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_A3WKN2 Response regulator (CheY,wHTH domains) n=1 Tax=I... 86 5e-16 UniRef50_Q44929 Response regulator gtcR n=8 Tax=Firmicutes RepID... 86 5e-16 UniRef50_A4G2G5 Phosphate regulon transcriptional regulatory pro... 86 5e-16 UniRef50_B7QTW7 Two-component response regulator n=1 Tax=Ruegeri... 85 5e-16 UniRef50_C7LZ74 Two component transcriptional regulator, winged ... 85 5e-16 UniRef50_A8LHM5 Two component transcriptional regulator, winged ... 85 5e-16 UniRef50_Q187R8 Two-component response regulator n=6 Tax=Clostri... 85 5e-16 UniRef50_A6M2A3 Two component transcriptional regulator, winged ... 85 5e-16 UniRef50_A1S1W0 Response regulator receiver protein n=1 Tax=Shew... 85 5e-16 UniRef50_C5CE19 Two component transcriptional regulator, winged ... 85 5e-16 UniRef50_A7GB96 DNA-binding response regulator n=16 Tax=Bacteria... 85 5e-16 UniRef50_Q3MGM2 Sensor protein n=22 Tax=Bacteria RepID=Q3MGM2_ANAVT 85 6e-16 UniRef50_B4WP26 Response regulator receiver domain protein n=1 T... 85 6e-16 UniRef50_C4Z360 Two-component system, OmpR family, response regu... 85 6e-16 UniRef50_A6VT30 Two component transcriptional regulator, winged ... 85 6e-16 UniRef50_B1XLL2 Two-component response regulator n=3 Tax=Synecho... 85 6e-16 UniRef50_C7R7C9 Two component transcriptional regulator, winged ... 85 6e-16 UniRef50_Q3B3K7 Two component transcriptional regulator, winged ... 85 6e-16 UniRef50_B6JIF2 DNA-binding response regulator OmpR n=1 Tax=Olig... 85 6e-16 UniRef50_B8FS42 Two component transcriptional regulator, winged ... 85 6e-16 UniRef50_UPI0000164CF1 response regulator n=1 Tax=Deinococcus ra... 85 7e-16 UniRef50_Q2G7V2 Two component transcriptional regulator, winged ... 85 7e-16 UniRef50_Q0TP36 DNA-binding response regulator n=142 Tax=Bacteri... 85 7e-16 UniRef50_B6IQC2 Cell cycle transcriptional regulator, putative n... 85 7e-16 UniRef50_UPI0001973D88 response regulator DrrA n=1 Tax=Clostridi... 85 7e-16 UniRef50_D2QX61 Two component transcriptional regulator, winged ... 85 7e-16 UniRef50_C6I3R1 Two-component system response regulator n=20 Tax... 85 7e-16 UniRef50_D1AFR9 Two component transcriptional regulator, winged ... 85 7e-16 UniRef50_Q97FK2 Response regulator (CheY-like receiver domain an... 85 7e-16 UniRef50_C0Z621 Two-component response regulator n=5 Tax=Firmicu... 85 7e-16 UniRef50_Q04942 Transcriptional regulatory protein afsQ1 n=34 Ta... 85 7e-16 UniRef50_B1ZVS5 Two component transcriptional regulator, winged ... 85 7e-16 UniRef50_A4X7Q0 Response regulator receiver n=46 Tax=Actinomycet... 85 7e-16 UniRef50_C9Y9A3 Transcriptional regulatory protein ompR n=1 Tax=... 85 7e-16 UniRef50_C8WIG3 Two component transcriptional regulator, winged ... 85 8e-16 UniRef50_B8IM29 Two component transcriptional regulator, winged ... 85 8e-16 UniRef50_D1VT63 Regulatory protein VanR n=1 Tax=Peptoniphilus la... 85 8e-16 UniRef50_A7BVU1 DNA-binding response regulator PhoB n=1 Tax=Begg... 85 8e-16 UniRef50_Q631U4 Response regulator n=1 Tax=Bacillus cereus E33L ... 85 8e-16 UniRef50_B3QUP3 Two component transcriptional regulator, winged ... 85 8e-16 UniRef50_C7RUD8 Two component transcriptional regulator, winged ... 85 8e-16 UniRef50_A9AWE4 Two component transcriptional regulator, winged ... 85 8e-16 UniRef50_B6BWN6 Two component transcriptional regulator, winged ... 85 8e-16 UniRef50_C6J181 Two-component system response regulator n=1 Tax=... 85 8e-16 UniRef50_C7N3P4 Response regulator with CheY-like receiver domai... 85 8e-16 UniRef50_B0G6B9 Putative uncharacterized protein n=4 Tax=Clostri... 85 8e-16 UniRef50_C6D3C2 Two component transcriptional regulator, winged ... 84 9e-16 UniRef50_P23620 Phosphate regulon transcriptional regulatory pro... 84 9e-16 UniRef50_A9FZS4 Response regulator n=2 Tax=Myxococcales RepID=A9... 84 9e-16 UniRef50_D1CGU9 Two component transcriptional regulator, winged ... 84 9e-16 UniRef50_C7MP89 Response regulator with CheY-like receiver domai... 84 9e-16 UniRef50_C8UTJ5 Two-component response regulator n=9 Tax=Lactoba... 84 9e-16 UniRef50_C1IA20 Two-component system response regulator n=1 Tax=... 84 9e-16 UniRef50_C9RQT3 Two component transcriptional regulator, winged ... 84 9e-16 UniRef50_Q2W608 Response regulator consisting of a CheY-like rec... 84 1e-15 UniRef50_B5EH76 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_P50351 Transcriptional regulatory protein chvI n=188 Ta... 84 1e-15 UniRef50_B6IYL9 Two-component response regulator GltR n=1 Tax=Rh... 84 1e-15 UniRef50_C3XKF1 DNA-binding response regulator n=4 Tax=Campyloba... 84 1e-15 UniRef50_A6LA64 Two-component system response regulator n=12 Tax... 84 1e-15 UniRef50_A3ERN0 Putative two component transcriptional regulator... 84 1e-15 UniRef50_Q1IVX4 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_Q63CK0 Response regulator n=95 Tax=Firmicutes RepID=Q63... 84 1e-15 UniRef50_B1ZS16 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A5GA68 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_Q3A1Q2 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_D1A718 Putative two component transcriptional regulator... 84 1e-15 UniRef50_D0MIF5 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_B4DAQ3 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_Q3ZVS3 DNA-binding response regulator n=4 Tax=Dehalococ... 84 1e-15 UniRef50_A7ZEI3 Transcriptional activator protein CopR n=9 Tax=B... 84 1e-15 UniRef50_B2TI09 Two-component response regulator n=3 Tax=Clostri... 84 1e-15 UniRef50_A9ANV0 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_B7HUH0 DNA-binding response regulator n=65 Tax=Firmicut... 84 1e-15 UniRef50_B2IZ13 Sensor protein n=11 Tax=Cyanobacteria RepID=B2IZ... 84 1e-15 UniRef50_Q99U73 Response regulator arlR n=10 Tax=Firmicutes RepI... 84 1e-15 UniRef50_C7Q501 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_D2BK97 Two-component system, response regulator n=5 Tax... 84 1e-15 UniRef50_C3JQ04 Transcriptional regulatory protein n=2 Tax=Rhodo... 84 1e-15 UniRef50_A5ZPI0 Putative uncharacterized protein n=6 Tax=Bacteri... 84 1e-15 UniRef50_A8LWI8 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A9H3V0 Two component Transcriptional regulator n=96 Tax... 84 1e-15 UniRef50_A5MZ62 Transcriptional regulator n=27 Tax=Bacteria RepI... 84 1e-15 UniRef50_Q88HA6 Transcriptional regulatory protein RstA, putativ... 84 1e-15 UniRef50_C5AL42 Response regulator consisting of a CheY-like rec... 84 1e-15 UniRef50_B7K2S9 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_UPI0001C37682 two component transcriptional regulator n... 84 1e-15 UniRef50_B9YAL6 Putative uncharacterized protein n=1 Tax=Holdema... 84 1e-15 UniRef50_Q39SW2 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A6BKE3 Putative uncharacterized protein n=3 Tax=Clostri... 84 1e-15 UniRef50_Q6MA20 Putative two-component response regulator phoP n... 84 1e-15 UniRef50_A4J7U5 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_C7PP48 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A9D5A2 Osmolarity response regulator n=1 Tax=Hoeflea ph... 84 1e-15 UniRef50_B7K6Q7 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_B5VWD3 Multi-component transcriptional regulator, winge... 84 1e-15 UniRef50_A0RL52 DNA-binding response regulator n=93 Tax=Firmicut... 84 1e-15 UniRef50_D1X187 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_B6FMI5 Putative uncharacterized protein n=7 Tax=Clostri... 84 1e-15 UniRef50_UPI0001C16F99 Multi-component Transcriptional regulator... 84 1e-15 UniRef50_Q2S740 Response regulator consisting of a CheY-like rec... 84 1e-15 UniRef50_C9XRU4 Two-component system response regulator n=12 Tax... 84 1e-15 UniRef50_A6TSH7 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_A6M1X5 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_C6D0Z2 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_B8I8Q2 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_Q2W3Z2 Response regulator consisting of a CheY-like rec... 84 2e-15 UniRef50_A6T3B9 Two components system response regulator n=48 Ta... 84 2e-15 UniRef50_D0Z2F0 DNA-binding response regulator n=1 Tax=Photobact... 84 2e-15 UniRef50_C8P150 Regulatory protein VanR n=1 Tax=Erysipelothrix r... 84 2e-15 UniRef50_D0LJX0 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_B8HL49 Multi-component transcriptional regulator, winge... 84 2e-15 UniRef50_C1A8B6 OmpR family two-component response regulator n=1... 84 2e-15 UniRef50_Q83N47 Two-component system response regulator n=8 Tax=... 84 2e-15 UniRef50_Q3ATG7 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_C3M7Y9 Transcriptional regulator n=27 Tax=Vibrionaceae ... 84 2e-15 UniRef50_C8WPK8 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_D2QKB6 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_B8FY05 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_A5FVA6 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_UPI0001C37B2E two component transcriptional regulator n... 83 2e-15 UniRef50_Q7UPW2 Two-component response regulator n=1 Tax=Rhodopi... 83 2e-15 UniRef50_C4XS15 OmpR family two-component response regulator n=2... 83 2e-15 UniRef50_C8NR68 DNA-binding response regulator n=12 Tax=Bacteria... 83 2e-15 UniRef50_C6WE10 Putative two component transcriptional regulator... 83 2e-15 UniRef50_B7IIP6 Transcriptional regulatory protein ResD n=34 Tax... 83 2e-15 UniRef50_B0S0W9 Two-component response regulator n=9 Tax=Clostri... 83 2e-15 UniRef50_UPI0001C4272B hypothetical protein BpOF4_20304 n=2 Tax=... 83 2e-15 UniRef50_Q12RS3 Transcriptional regulatory protein-like protein ... 83 2e-15 UniRef50_C0Z911 Two-component response regulator n=4 Tax=Firmicu... 83 2e-15 UniRef50_A3NL94 DNA-binding response regulator n=27 Tax=pseudoma... 83 2e-15 UniRef50_B9KBQ0 Response regulator n=6 Tax=Thermotogaceae RepID=... 83 2e-15 UniRef50_C8VYB2 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_C4KYM3 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_B5CLM3 Putative uncharacterized protein n=1 Tax=Ruminoc... 83 2e-15 UniRef50_C6PQ36 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_D1CTN9 Phosphate regulon two component response regulat... 83 2e-15 UniRef50_Q0IAU4 Two-component response regulator n=1 Tax=Synecho... 83 2e-15 UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=... 83 2e-15 UniRef50_C3WHY2 Two-component response regulator n=8 Tax=Fusobac... 83 2e-15 UniRef50_UPI0001B518F4 two-component system response regulator n... 83 2e-15 UniRef50_A5N339 Predicted transcriptional regulator n=4 Tax=Clos... 83 2e-15 UniRef50_B2HJN8 Transcriptional regulatory protein n=15 Tax=Myco... 83 2e-15 UniRef50_Q1IHU2 Lysine decarboxylase transcriptional regulator, ... 83 3e-15 UniRef50_B0RLM8 Transcriptional regulator n=6 Tax=Xanthomonas Re... 83 3e-15 UniRef50_A1WWM5 Response regulator receiver protein n=1 Tax=Halo... 83 3e-15 UniRef50_D0MFI7 Putative two component transcriptional regulator... 83 3e-15 UniRef50_UPI000185BED4 KDP operon transcriptional regulatory pro... 83 3e-15 UniRef50_Q72TM3 Response regulator n=2 Tax=Leptospira interrogan... 83 3e-15 UniRef50_Q2JGV9 Response regulator receiver protein n=1 Tax=Fran... 83 3e-15 UniRef50_A0PWB4 Response regulator mprA n=284 Tax=Bacteria RepID... 83 3e-15 UniRef50_C1F979 DNA-binding response regulator n=1 Tax=Acidobact... 83 3e-15 UniRef50_C0ET35 Putative uncharacterized protein n=1 Tax=Eubacte... 83 3e-15 UniRef50_Q2RPG3 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_C0ZIT9 Two-component response regulator n=2 Tax=Bacilla... 83 3e-15 UniRef50_A7GLY2 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_C9Z8Q7 Putative two-component response regulator n=1 Ta... 83 3e-15 UniRef50_Q47QJ3 Response regulator receiver n=1 Tax=Thermobifida... 83 3e-15 UniRef50_C1A710 OmpR family two-component response regulator n=1... 83 3e-15 UniRef50_A7VHB9 Putative uncharacterized protein n=5 Tax=Firmicu... 83 3e-15 UniRef50_B0SY74 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_C6J4Z6 Two component transcriptional regulator n=1 Tax=... 83 3e-15 UniRef50_B1XPE6 Two-component response regulator; transcriptiona... 83 3e-15 UniRef50_Q3JG93 Response regulator protein n=61 Tax=Proteobacter... 83 3e-15 UniRef50_B1YLJ6 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_C6AWS7 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_C4DQ28 Response regulator with CheY-like receiver domai... 83 3e-15 UniRef50_B5HID4 Two-component system response regulator n=3 Tax=... 83 3e-15 UniRef50_C9XSJ2 Two-component response regulator n=15 Tax=Clostr... 83 3e-15 UniRef50_C6X1B3 Phosphate regulon transcriptional regulatory pro... 83 3e-15 UniRef50_A9KJT6 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_Q2IUG0 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_C1I9Y7 Two component transcriptional regulator n=1 Tax=... 83 3e-15 UniRef50_B0ACA3 Putative uncharacterized protein n=1 Tax=Clostri... 83 3e-15 UniRef50_Q47IJ9 Two component transcriptional regulator, winged ... 82 3e-15 UniRef50_C6B8S5 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_C0ZDJ8 Two-component response regulator n=5 Tax=Firmicu... 82 4e-15 UniRef50_Q5WC24 Two-component response regulator n=1 Tax=Bacillu... 82 4e-15 UniRef50_A0YRX3 Two-component response regulator n=1 Tax=Lyngbya... 82 4e-15 UniRef50_C6HXQ3 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_Q2J7U7 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_B5VW75 Multi-component transcriptional regulator, winge... 82 4e-15 UniRef50_A6DFF3 DNA-binding response regulator n=2 Tax=Lentispha... 82 4e-15 UniRef50_C4RMB5 Two-component system response regulator n=1 Tax=... 82 4e-15 UniRef50_A9KSV1 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_B1HZW1 Transcriptional regulatory protein cutR (Defecti... 82 4e-15 UniRef50_Q49XM7 Response regulator arlR n=145 Tax=Bacteria RepID... 82 4e-15 UniRef50_Q1NLC6 Response regulator receiver n=3 Tax=Deltaproteob... 82 4e-15 UniRef50_C0CLW6 Putative uncharacterized protein n=1 Tax=Blautia... 82 4e-15 UniRef50_Q9F5J0 Sim1 n=2 Tax=Streptomyces antibioticus RepID=Q9F... 82 4e-15 UniRef50_Q7ULL1 Two-component system response regulator n=1 Tax=... 82 4e-15 UniRef50_B6GBG2 Putative uncharacterized protein n=2 Tax=Collins... 82 4e-15 UniRef50_C5NUZ8 Response regulator ArlR n=4 Tax=Bacteria RepID=C... 82 4e-15 UniRef50_B5W2T9 Multi-component transcriptional regulator, winge... 82 4e-15 UniRef50_C4Z9T4 Putative uncharacterized protein n=1 Tax=Eubacte... 82 5e-15 UniRef50_A5EYW4 Transcriptional regulator n=31 Tax=Bacteria RepI... 82 5e-15 UniRef50_B6BUZ2 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_A4SHT1 Two-component system response regulator n=10 Tax... 82 5e-15 UniRef50_B8FQS3 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_A0RG02 Two-component response regulator n=92 Tax=Bacter... 82 5e-15 UniRef50_C8WMT6 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_Q1YN14 Putative transcriptional regulator n=1 Tax=Auran... 82 5e-15 UniRef50_Q82EB1 Transcriptional regulatory protein cseB n=29 Tax... 82 5e-15 UniRef50_C7N0P4 Response regulator with CheY-like receiver domai... 82 5e-15 UniRef50_C9B9W7 Transcriptional regulator n=12 Tax=cellular orga... 82 5e-15 UniRef50_C2BEN4 Possible response regulator n=3 Tax=Anaerococcus... 82 5e-15 UniRef50_A1S359 Putative transcriptional regulator, CadC n=1 Tax... 82 5e-15 UniRef50_B2IXN9 Multi-component transcriptional regulator, winge... 82 5e-15 UniRef50_UPI0001787D57 two component transcriptional regulator, ... 82 5e-15 UniRef50_P15795 Cholera toxin transcriptional activator n=121 Ta... 82 5e-15 UniRef50_D1VJ14 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_A6W7C9 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_A8W7F8 Putative regulator n=1 Tax=Streptomyces refuineu... 82 6e-15 UniRef50_C7QZL8 Putative two component transcriptional regulator... 82 6e-15 UniRef50_C4ZEN6 Two component transcriptional regulator, winged ... 82 6e-15 UniRef50_A3ER20 Putative two component transcriptional regulator... 82 6e-15 UniRef50_B0S387 Two-component response regulator n=6 Tax=Clostri... 82 6e-15 UniRef50_C7QI13 Two component transcriptional regulator, winged ... 82 6e-15 UniRef50_O66657 Transcriptional regulator (PhoB-like) n=2 Tax=Aq... 82 6e-15 UniRef50_A3Q549 Two component transcriptional regulator, winged ... 82 7e-15 UniRef50_B9JNY4 Phosphate regulon transcriptional regulatory pro... 82 7e-15 UniRef50_UPI0001AF1AC1 two-component system response regulator n... 82 7e-15 UniRef50_A9KX94 Two component transcriptional regulator, winged ... 82 7e-15 UniRef50_C6LCG6 Phosphate regulon transcriptional regulatory pro... 82 7e-15 UniRef50_A5VAJ0 Two component transcriptional regulator, winged ... 82 7e-15 UniRef50_UPI0001AEBEBF two component transcriptional regulator, ... 82 7e-15 UniRef50_C9ZAU5 Putative two-component system response regulator... 82 7e-15 UniRef50_A7BNW6 Two component response regulator n=1 Tax=Beggiat... 82 7e-15 UniRef50_A5Z504 Putative uncharacterized protein n=5 Tax=Clostri... 82 7e-15 UniRef50_B7GFY6 DNA-binding response regulator, OmpR family (REC... 81 7e-15 UniRef50_C7S7A3 LRA-16 n=2 Tax=Bacteria RepID=C7S7A3_9BACT 81 7e-15 UniRef50_D1BJH9 Response regulator with CheY-like receiver domai... 81 8e-15 UniRef50_C0QFG8 Two-component DNA-binding response regulator n=1... 81 8e-15 UniRef50_C7MMC5 Response regulator with CheY-like receiver domai... 81 8e-15 UniRef50_B2D6Y9 ToxR n=2 Tax=Vibrio cholerae RepID=B2D6Y9_VIBCH 81 8e-15 UniRef50_Q2NZ71 Two-component system regulatory protein n=18 Tax... 81 8e-15 UniRef50_A2CD17 Two-component response regulator n=58 Tax=Cyanob... 81 8e-15 UniRef50_A4FGQ8 Putative uncharacterized protein n=1 Tax=Sacchar... 81 8e-15 UniRef50_D2R142 Two component transcriptional regulator, winged ... 81 8e-15 UniRef50_C6LFN3 DNA-binding response regulator ResD n=21 Tax=Bac... 81 8e-15 UniRef50_Q1D8M8 DNA-binding response regulator PhoP2 n=4 Tax=Myx... 81 8e-15 UniRef50_A5N5X6 Transcriptional regulator n=5 Tax=Clostridium Re... 81 8e-15 UniRef50_C1A1E5 Turgor pressure transcriptional regulator n=5 Ta... 81 8e-15 UniRef50_A4X6U8 Transcriptional regulator domain protein n=4 Tax... 81 8e-15 UniRef50_Q1LCD6 Two component transcriptional regulator, winged ... 81 8e-15 UniRef50_A8L9L0 Two component transcriptional regulator, winged ... 81 8e-15 UniRef50_B9T9H2 Putative uncharacterized protein n=1 Tax=Ricinus... 81 8e-15 UniRef50_P0A9Q3 Aerobic respiration control protein arcA n=222 T... 81 8e-15 UniRef50_B0RZK9 Two-component response regulator n=2 Tax=Finegol... 81 9e-15 UniRef50_C3WA46 Two-component response regulator n=6 Tax=Fusobac... 81 9e-15 UniRef50_A3Z9V3 Two-component response regulator n=1 Tax=Synecho... 81 9e-15 UniRef50_B4WPA6 Response regulator receiver domain protein n=1 T... 81 9e-15 UniRef50_Q1QYP1 Two component transcriptional regulator, winged ... 81 9e-15 UniRef50_C4L2J9 Two component transcriptional regulator, winged ... 81 9e-15 UniRef50_A4AIS8 Two-component system, regulatory protein n=2 Tax... 81 9e-15 UniRef50_A9AUH9 Two component transcriptional regulator, winged ... 81 9e-15 UniRef50_UPI0001787E68 two component transcriptional regulator, ... 81 1e-14 UniRef50_A4WZ32 Transposase and inactivated derivatives-like pro... 81 1e-14 UniRef50_Q3KB13 Two component Transcriptional regulator, Winged ... 81 1e-14 UniRef50_D1AJ61 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A4W108 Response regulator consisting of a CheY-like rec... 81 1e-14 UniRef50_Q6FEG0 Transcriptional regulator protein (OmpR family),... 81 1e-14 UniRef50_B7KB48 Multi-component transcriptional regulator, winge... 81 1e-14 UniRef50_D1CB22 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_C8WHB5 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_C6LI81 DNA-binding response regulator DltR n=2 Tax=Clos... 81 1e-14 UniRef50_C8W041 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_C4I5X0 DNA-binding response regulator n=78 Tax=Bacteria... 81 1e-14 UniRef50_B2XT10 Transcriptional regulatory protein 1 n=3 Tax=Het... 81 1e-14 UniRef50_C0YPJ5 DNA-binding response regulator n=1 Tax=Chryseoba... 81 1e-14 UniRef50_C9PHD6 Transcriptional activator ToxR n=1 Tax=Vibrio fu... 81 1e-14 UniRef50_A5CFS8 Transcriptional regulator n=1 Tax=uncultured mar... 81 1e-14 UniRef50_B1HT37 Transcriptional regulatory protein srrA (Staphyl... 81 1e-14 UniRef50_C8WG99 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_P08368 Transcriptional regulatory protein creB n=64 Tax... 81 1e-14 UniRef50_Q8DHN5 Two-component response regulator n=2 Tax=Chrooco... 81 1e-14 UniRef50_D1SG74 Putative two component transcriptional regulator... 81 1e-14 UniRef50_C7H9H0 Subtilin biosynthesis regulatory protein SpaR n=... 81 1e-14 UniRef50_B5IMP1 Two-component response regulator n=1 Tax=Cyanobi... 81 1e-14 UniRef50_Q21HG9 Transcriptional regulatory protein-like protein ... 81 1e-14 UniRef50_D1B9J7 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A8ZNT0 Two-component transcriptional regulator/diguanyl... 81 1e-14 UniRef50_B9XE94 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_UPI0001C321CD putative two component transcriptional re... 81 1e-14 UniRef50_UPI0001C1726B Multi-component Transcriptional regulator... 81 1e-14 UniRef50_C9XJX9 Two-component system response regulator n=108 Ta... 81 1e-14 UniRef50_D1VF89 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q1IUD6 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q12PS6 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q3Z753 DNA-binding response regulator n=2 Tax=Dehalococ... 81 1e-14 UniRef50_Q01473 Protein rcaC n=1 Tax=Fremyella diplosiphon RepID... 81 1e-14 UniRef50_Q0AKG2 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_D2YQP0 Transmembrane regulatory protein ToxR n=7 Tax=Vi... 81 1e-14 UniRef50_C6LDD6 DNA-binding response regulator n=3 Tax=Clostridi... 81 1e-14 UniRef50_B1IAB9 VncR, response regulator n=69 Tax=Firmicutes Rep... 81 1e-14 UniRef50_Q3DCX6 DNA-binding response regulator n=7 Tax=Streptoco... 81 1e-14 UniRef50_B5HT18 Repressor-response regulator n=1 Tax=Streptomyce... 81 1e-14 UniRef50_Q01ZD3 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q0K0A7 Response regulator, OmpR-family n=9 Tax=Bacteria... 81 2e-14 UniRef50_Q1ASD3 Two component transcriptional regulator, winged ... 81 2e-14 UniRef50_A4AF30 Two component transcriptional regulator, winged ... 81 2e-14 UniRef50_B0P857 Putative uncharacterized protein n=1 Tax=Anaerot... 81 2e-14 UniRef50_B0MTN6 Putative uncharacterized protein n=1 Tax=Alistip... 81 2e-14 UniRef50_C8WKQ8 Two component transcriptional regulator, winged ... 81 2e-14 UniRef50_C6WIA6 Two component transcriptional regulator, winged ... 81 2e-14 UniRef50_C7ND40 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_A0PNV3 Two component regulator-receiver domain n=6 Tax=... 80 2e-14 UniRef50_C0QDS5 Two-component response regulator (OmpR-like prot... 80 2e-14 UniRef50_A9BIE2 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_D2PKG5 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_C3X641 Two component transcriptional regulator n=1 Tax=... 80 2e-14 UniRef50_C7Q2J4 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_C5B7S6 Transcriptional activator CadC n=2 Tax=Enterobac... 80 2e-14 UniRef50_B8IGE5 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_C8SEM3 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_Q2JIE3 DNA-binding response regulator n=12 Tax=Cyanobac... 80 2e-14 UniRef50_C1FSZ1 Regulatory protein VanR n=16 Tax=Firmicutes RepI... 80 2e-14 UniRef50_B6QXV6 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_C8NDP1 DNA-binding response regulator n=2 Tax=Firmicute... 80 2e-14 UniRef50_C9ZA01 Putative two-component system response regulator... 80 2e-14 UniRef50_C9YZ98 Putative two component response regulator n=1 Ta... 80 2e-14 UniRef50_B2V1F5 Two component response regulator n=6 Tax=Bacteri... 80 2e-14 UniRef50_A5MZN8 Predicted transcriptional regulator n=2 Tax=Clos... 80 2e-14 UniRef50_Q12S47 Transcriptional regulatory protein-like protein ... 80 2e-14 UniRef50_B7IXR9 DNA-binding response regulator n=167 Tax=Bacilli... 80 2e-14 UniRef50_A6TSQ9 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_Q6MHZ0 Two component response regulator n=1 Tax=Bdellov... 80 2e-14 UniRef50_A9FLR1 DNA-binding response regulator n=1 Tax=Sorangium... 80 2e-14 UniRef50_Q0EY91 Two comoponent transcriptional regulator, winged... 80 2e-14 UniRef50_C1SI97 Response regulator with CheY-like receiver domai... 80 2e-14 UniRef50_B1I7Y4 Response regulator SaeR n=46 Tax=Firmicutes RepI... 80 2e-14 UniRef50_Q0I8A9 DNA-binding response regulator n=13 Tax=Cyanobac... 80 2e-14 UniRef50_C3JSB6 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_C1ACD7 OmpR family two-component response regulator n=1... 80 2e-14 UniRef50_B1WTP9 Two-component response regulator n=12 Tax=Cyanob... 80 2e-14 UniRef50_Q2BRQ1 Transcriptional regulatory protein CpxR (Fragmen... 80 2e-14 UniRef50_Q2J4Y7 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_B7RXJ1 Response regulator receiver domain protein n=1 T... 80 2e-14 UniRef50_A4YSP3 Putative uncharacterized protein n=1 Tax=Bradyrh... 80 3e-14 UniRef50_Q6AQP4 Probable two-component system response regulator... 80 3e-14 UniRef50_B8HC02 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_Q020N6 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_C1D3W6 Putative response regulator n=1 Tax=Deinococcus ... 80 3e-14 UniRef50_A1VSF0 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_A8ZMT3 Transcriptional regulatory protein, C terminal d... 80 3e-14 UniRef50_D1AQD9 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_C7MDU8 Response regulator with CheY-like receiver domai... 80 3e-14 UniRef50_D1C556 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_A1SMF6 Transcriptional regulator domain protein n=1 Tax... 79 3e-14 UniRef50_UPI0001C35523 two component transcriptional regulator, ... 79 3e-14 UniRef50_C6J108 Multi-component transcriptional regulator n=2 Ta... 79 3e-14 UniRef50_A8SYK9 Putative uncharacterized protein n=3 Tax=Clostri... 79 3e-14 UniRef50_B4CUK8 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_Q47YY9 DNA-binding response regulator BaeR n=9 Tax=Bact... 79 3e-14 UniRef50_Q47PT2 Similar to Response regulators consisting of a C... 79 3e-14 UniRef50_C6LHZ3 Regulatory protein VanR n=2 Tax=Clostridiales Re... 79 3e-14 UniRef50_A0QHS7 Two component system response regulator n=6 Tax=... 79 3e-14 UniRef50_A4T1Y6 Response regulator receiver protein n=8 Tax=Myco... 79 3e-14 UniRef50_B6R2K8 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_C6D1N2 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_Q0VLF7 DNA-binding heavy metal response regulator, puta... 79 3e-14 UniRef50_A5GMH0 Two-component sytem response regulator n=10 Tax=... 79 3e-14 UniRef50_C1I8T8 Two-component system response regulator n=2 Tax=... 79 3e-14 UniRef50_P76340 Probable transcriptional regulatory protein yedW... 79 3e-14 UniRef50_Q2RYR0 Response regulator receiver domain protein n=2 T... 79 3e-14 UniRef50_Q1IUY4 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_C0QZY4 OmpR n=2 Tax=Brachyspira RepID=C0QZY4_BRAHW 79 3e-14 UniRef50_Q5LZ35 Response regulator (Homolog to RR01Spn & Sth) n=... 79 4e-14 UniRef50_A8L7H2 Putative two component transcriptional regulator... 79 4e-14 UniRef50_Q98AP0 Phosphate regulatory protein n=2 Tax=Mesorhizobi... 79 4e-14 UniRef50_Q893J9 Transcriptional regulatory protein n=1 Tax=Clost... 79 4e-14 UniRef50_C9NBD5 Two component transcriptional regulator, winged ... 79 4e-14 UniRef50_B2TMQ5 Regulatory protein VanR n=5 Tax=Clostridium RepI... 79 4e-14 UniRef50_C4ZB82 Putative uncharacterized protein n=1 Tax=Eubacte... 79 4e-14 UniRef50_D2LS32 Two component transcriptional regulator, winged ... 79 4e-14 UniRef50_Q0KAU9 Response regulator, OmpR-family n=1 Tax=Ralstoni... 79 4e-14 UniRef50_A9F790 Two component system transcriptional regulatory ... 79 4e-14 UniRef50_A8HY28 Response regulator receiver n=2 Tax=Alphaproteob... 79 4e-14 UniRef50_Q21N82 Response regulator receiver n=1 Tax=Saccharophag... 79 4e-14 UniRef50_A8EX60 Two-component response regulator n=2 Tax=Epsilon... 79 4e-14 UniRef50_A6VRR3 Two component transcriptional regulator, winged ... 79 4e-14 UniRef50_A0AHH4 Complete genome n=7 Tax=Listeria RepID=A0AHH4_LISW6 79 4e-14 UniRef50_C7VU49 Subtilin biosynthesis regulatory protein SpaR n=... 79 4e-14 UniRef50_C1AAZ5 Phosphate regulon transcriptional regulatory pro... 79 4e-14 UniRef50_Q2P1E0 VirG-like two component response regulator n=13 ... 79 4e-14 UniRef50_C0YVQ4 Response regulator n=1 Tax=Chryseobacterium gleu... 79 4e-14 UniRef50_C1F3P9 Transcriptional regulator, putative n=1 Tax=Acid... 79 4e-14 UniRef50_B1ZUL4 Two component transcriptional regulator, winged ... 79 4e-14 UniRef50_A3PND2 Two component transcriptional regulator, winged ... 79 4e-14 UniRef50_Q1ISH8 Lysine decarboxylase transcriptional regulator, ... 79 4e-14 UniRef50_C6LDQ2 DNA-binding response regulator YycF n=1 Tax=Brya... 79 4e-14 UniRef50_Q7NGT9 Two-component response regulator n=1 Tax=Gloeoba... 79 5e-14 UniRef50_C9XT65 Two-component response regulator n=18 Tax=Bacter... 79 5e-14 UniRef50_A5FEG3 Two-component transcriptional regulator, winged ... 79 5e-14 UniRef50_A8EVJ9 DNA-binding response regulator n=1 Tax=Arcobacte... 79 5e-14 UniRef50_B0G6A1 Putative uncharacterized protein n=2 Tax=Lachnos... 79 5e-14 UniRef50_B5WI25 Two component transcriptional regulator, winged ... 79 5e-14 Sequences not found previously or not previously below threshold: >UniRef50_P94504 Transcriptional regulatory protein yvrH n=5 Tax=Bacillus RepID=YVRH_BACSU Length = 237 Score = 116 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +FCE+P + S+ ++ +K+ G + TV V IR++R+ E P PE I T+ G Sbjct: 165 LQYFCEHPNVVLSKDQIYEKVWGYPSYGDNNTVMVHIRKLREKIERDPSNPEYIVTVRGL 224 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 225 GYRFIPNPE 233 >UniRef50_A8F5W8 Two component transcriptional regulator, winged helix family n=24 Tax=Bacteria RepID=A8F5W8_THELT Length = 263 Score = 112 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 39/70 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN GK+ SR LL K+ G + RTVDV IRR+R E P P+ I T+ G+ Sbjct: 193 LRFLAENEGKVFSRDVLLDKLWGYDYYGDTRTVDVHIRRLRTKIEEDPSNPKYIITVRGK 252 Query: 62 GYRFCGDLED 71 GY+F ++ Sbjct: 253 GYKFRDPGKE 262 >UniRef50_Q65F19 Two-component response regulator YvrH n=85 Tax=Firmicutes RepID=Q65F19_BACLD Length = 242 Score = 111 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 40/68 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +FC++P ++ S+ ++ +K+ G TV V IR++R+ E P +PE I TI G Sbjct: 168 LQYFCDHPNRVLSKDQIYEKVWGVPSYGDSNTVMVHIRKLREKIEKDPSSPEYIVTIRGL 227 Query: 62 GYRFCGDL 69 GY+F + Sbjct: 228 GYKFVPNP 235 >UniRef50_Q1AZ24 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZ24_RUBXD Length = 234 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG++ SR +++ + G E R+ DV I+ +R+ E P P I T+ G Sbjct: 167 VLALLASNPGRVYSREQIMDHLWGGEFFGEPRSADVHIQHLRQKIEPDPKNPRYIQTVRG 226 Query: 61 EGYRFC 66 GYRF Sbjct: 227 MGYRFA 232 >UniRef50_B2J8Q5 Two component transcriptional regulator, winged helix family n=8 Tax=Cyanobacteria RepID=B2J8Q5_NOSP7 Length = 239 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P + SR +L++K+ G + R VDV I ++RK E P PE I T+ G Sbjct: 166 ILHFLASHPNQAWSRPQLIQKIWGCDYVGDGRVVDVHIGQLRKKMEVDPSVPEFIKTVRG 225 Query: 61 EGYRFCGDLED 71 GY+F E+ Sbjct: 226 YGYKFEAPDEN 236 >UniRef50_C8VW64 Two component transcriptional regulator, winged helix family n=4 Tax=Clostridia RepID=C8VW64_DESAS Length = 229 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ ++A LL K+ D TV V IRR+R+ E+ P PE I T+ G Sbjct: 162 LWLMASNPNRVFTKAHLLDKIWDSSFYGDDNTVTVHIRRLREKVETDPSNPEYIKTVWGM 221 Query: 62 GYRFCGD 68 GY+F + Sbjct: 222 GYKFEYE 228 >UniRef50_D2Q6K7 Response regulator-like transcriptional regulatory protein n=7 Tax=Bifidobacterium RepID=D2Q6K7_9BIFI Length = 253 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ +RA+LL+++ G + RTVDV IRR+R + +I T+ Sbjct: 168 LKYLVQHPGRVFTRAQLLQEVWGYDYYGGTRTVDVHIRRLRAKLG--GEYEHVIGTVRNV 225 Query: 62 GYRFCGDLED 71 GYRF E+ Sbjct: 226 GYRFDPPEEE 235 >UniRef50_Q2RZP5 Response regulator DrrA n=11 Tax=Bacteria RepID=Q2RZP5_SALRD Length = 245 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +PG+ SR ELL ++ G + + TV+ I R+R E P P + T+ G Sbjct: 171 LLLFARHPGRAFSRDELLDEVWGYQYSGYSHTVNTHINRLRNKIEPDPSEPRYVKTVWGV 230 Query: 62 GYRFCGDLE 70 GYRF E Sbjct: 231 GYRFAEREE 239 >UniRef50_B7GTW3 Response regulator receiver protein n=6 Tax=Bifidobacteriaceae RepID=B7GTW3_BIFLI Length = 266 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ +RA+LL+++ G + RTVDV IRR+R + +I T+ Sbjct: 169 LKYLVQHPGRVFTRAQLLQEVWGYDYYGGTRTVDVHIRRLRAKLG--GEYEHLIGTVRNV 226 Query: 62 GYRFCGDLED 71 GYRF D Sbjct: 227 GYRFDPPETD 236 >UniRef50_C6JFQ6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFQ6_9FIRM Length = 139 Score = 108 bits (271), Expect = 7e-23, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 28/66 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG++ S+ ++ + V I IR+ E P P I T+ G Sbjct: 68 ILQLLAQNPGRVFSKEQIYDIVWKESYFGDYNIVMSHISHIREKIEDDPGNPVYIQTVWG 127 Query: 61 EGYRFC 66 GY+F Sbjct: 128 VGYKFN 133 >UniRef50_Q05943 Transcriptional regulatory protein glnR n=102 Tax=Bacteria RepID=GLNR_STRCO Length = 267 Score = 107 bits (270), Expect = 1e-22, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ +RA+LL+++ G + RTVDV +RR+R P+ +I T+ Sbjct: 158 LKYLAQHPGRVFTRAQLLQEVWGYDYFGGTRTVDVHVRRLRAKLG--PEHESLIGTVRNV 215 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 216 GYRFVTPEK 224 >UniRef50_Q2BDN1 Two component transcriptional regulator, winged helix family protein n=2 Tax=Firmicutes RepID=Q2BDN1_9BACI Length = 234 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G++ S L + G++ RTV V I +RK E P PE I T+ G Sbjct: 168 LCCLAENAGRVFSAEHLFDSIWGKDSFGDIRTVMVHISNLRKKIEQDPARPEYIITVRGM 227 Query: 62 GYRFCG 67 GY+F G Sbjct: 228 GYKFNG 233 >UniRef50_C9KKD5 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKD5_9FIRM Length = 235 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG+ SR ELL+++ G E RTVDV IR +R + P + I T+ G Sbjct: 167 LKLLVTNPGRAFSRDELLERIWGYEYYGDTRTVDVHIRHLRAKLKDDPTVSDAIETVRGV 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFA 231 >UniRef50_A6EAJ4 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAJ4_9SPHI Length = 206 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 41/67 (61%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+F NP K+ +R L+ ++ G + RT+D+ I R+RK E+ PD P+++ T+ G Sbjct: 139 ILLYFLRNPNKVINRDALMLEVWGYNSDVNTRTLDMHIVRLRKKIEANPDNPQLLQTVRG 198 Query: 61 EGYRFCG 67 GYRF Sbjct: 199 IGYRFNP 205 >UniRef50_A8FHC6 Response regulator n=3 Tax=Bacillus RepID=A8FHC6_BACP2 Length = 240 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 38/66 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +FC++P + S+ ++ +K+ G + TV V IR++R+ E P PE I TI G Sbjct: 168 LKYFCDHPNVVLSKDQIYEKVWGVPSYGDNNTVMVHIRKLREKIELDPSQPEYIVTIRGM 227 Query: 62 GYRFCG 67 GY+F Sbjct: 228 GYKFIP 233 >UniRef50_C3KZU0 DNA-binding response regulator n=14 Tax=Firmicutes RepID=C3KZU0_CLOB6 Length = 235 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 37/68 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F ENP ++ ++ ++ + G E TV V +RR+R E P+ P++I T+ G Sbjct: 166 ILKLFFENPNRVFTKVQIYDSVWGEEFLSDYNTVTVHMRRLRSKIEDDPNNPKLIETVWG 225 Query: 61 EGYRFCGD 68 GY+ GD Sbjct: 226 IGYKLTGD 233 >UniRef50_A4J267 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J267_DESRM Length = 232 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P +I SR +LL+++ + + TV V IRR+R+ E PE+I T+ G Sbjct: 164 LWLMASHPNQIFSRLQLLEQIWESHFEGDEDTVTVHIRRLRRKIERDAAKPELIKTVWGV 223 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 224 GYKFEAPKE 232 >UniRef50_Q8DLA7 Two-component response regulator n=20 Tax=Bacteria RepID=Q8DLA7_THEEB Length = 256 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ R +LL ++ G + +TVDV IR +R+ E+ P P+ I T+ G Sbjct: 192 LELFMRHPRRVWPREQLLDQVWGPDFVGDSKTVDVHIRWLREKIETDPSHPQYILTVRGF 251 Query: 62 GYRF 65 GYRF Sbjct: 252 GYRF 255 >UniRef50_Q7NMA6 Two-component response regulator n=2 Tax=Bacteria RepID=Q7NMA6_GLOVI Length = 238 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 41/69 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG++ SR ELL+++ G + + RT+DV +R++R+ E P P + T+ G Sbjct: 170 LAQLADHPGRVYSRDELLERVWGYDFEGGHRTIDVHVRKLREKLEPDPTRPVYVLTVWGV 229 Query: 62 GYRFCGDLE 70 GY+F G Sbjct: 230 GYKFAGPPR 238 >UniRef50_Q1IMA9 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q1IMA9_ACIBL Length = 230 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R +LL + R+VDV +RRIR+ E P+ P + T+ G Sbjct: 163 LEYLARHPGRVFTRDQLLDAVWRETHYVTPRSVDVYVRRIREKIEENPEDPRYLKTVRGA 222 Query: 62 GYRFCGD 68 GYRF Sbjct: 223 GYRFEVP 229 >UniRef50_A7GKH0 Two component transcriptional regulator, winged helix family n=68 Tax=Firmicutes RepID=A7GKH0_BACCN Length = 238 Score = 105 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ ++ +L + + D TV V IR++RK E+ P P+ I T+ G Sbjct: 167 LKFFASNPEQVFTKTQLFRNVWDSNYIEDDNTVMVHIRKLRKKIEADPSNPKFIQTVWGI 226 Query: 62 GYRFCGD 68 GY+F G+ Sbjct: 227 GYKFVGE 233 >UniRef50_B8I014 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridium RepID=B8I014_CLOCE Length = 233 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +NP K+ ++ +L K + G + TV V IRR+R+ E P P I TI G Sbjct: 166 ILKLFLQNPRKVFTKNQLFKSIWGENYINDENTVMVHIRRLREKIEKDPSNPSYIQTIWG 225 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 226 IGYKLVEE 233 >UniRef50_C1XV31 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Meiothermus RepID=C1XV31_9DEIN Length = 256 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 38/68 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E G++ SR E+L ++ G ++ P RTVD I R+RK FE P P + T+ G Sbjct: 174 ILRLLAERAGEVVSRDEILDRVWGGDIFPSSRTVDNFIVRLRKLFEPDPAHPIYLHTVWG 233 Query: 61 EGYRFCGD 68 GYRF + Sbjct: 234 VGYRFTPE 241 >UniRef50_C3IWQ5 Two-component response regulator n=2 Tax=Bacillus thuringiensis RepID=C3IWQ5_BACTU Length = 214 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +PG+I ++ ++ + + D T+ V I R+R+ E +P P I TI G Sbjct: 141 ILTLFMGDPGRIFTKKQIFESVWSDYYCADDNTIMVHISRLREKLEDSPKNPVYIKTIRG 200 Query: 61 EGYRFCGDLE 70 GYRF E Sbjct: 201 LGYRFARKEE 210 >UniRef50_Q2S3D0 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3D0_SALRD Length = 253 Score = 105 bits (264), Expect = 5e-22, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 38/69 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F E+ G+ SR +LL+ + G RT+D + +RK E TPD P + T++G Sbjct: 173 ILTYFIEHRGRTVSREQLLRDVWGISGDITTRTIDRHVASLRKKIEPTPDEPAYLQTVYG 232 Query: 61 EGYRFCGDL 69 GY+F D Sbjct: 233 IGYKFVTDD 241 >UniRef50_A0PXH1 Transcriptional regulatory protein n=11 Tax=Clostridium RepID=A0PXH1_CLONN Length = 232 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN GK+ ++ ++ + + D + V I +R E P I TI G Sbjct: 164 ILFYLLENKGKVFTKKQIFEYVWEEPFYGDDNAIMVHISNLRDKIEDDSKNPHYIKTIRG 223 Query: 61 EGYRFCGDL 69 GY+ ++ Sbjct: 224 LGYKLDSNI 232 >UniRef50_P39663 Alkaline phosphatase synthesis transcriptional regulatory protein sphR n=34 Tax=Cyanobacteria RepID=SPHR_SYNE7 Length = 257 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 37/64 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR +LL+K+ G + +T+DV IR +R+ E+ P P + T+ G Sbjct: 193 LELFMRHPRRVWSRDQLLEKIWGIDFMGDSKTIDVHIRWLREKIEANPSNPSYLLTVRGF 252 Query: 62 GYRF 65 GYR Sbjct: 253 GYRL 256 >UniRef50_C6XZP6 Response regulator receiver n=3 Tax=Sphingobacteriaceae RepID=C6XZP6_PEDHD Length = 233 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 40/67 (59%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+F NP K+ +R EL+ + G + RT+D+ I R+RK E PD P+++ T+ G Sbjct: 166 ILLYFLRNPNKVINRDELMLVVWGYNSDVNTRTLDMHIVRLRKKIELNPDNPQLLQTVRG 225 Query: 61 EGYRFCG 67 GYRF Sbjct: 226 VGYRFNP 232 >UniRef50_C1F3E6 Response regulator DrrA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3E6_ACIC5 Length = 232 Score = 104 bits (262), Expect = 7e-22, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ SR LL + G R+VDV +RRIR+ ES P+ P + T+ G Sbjct: 163 LDYLARHPGRVFSRDHLLDAVWGDARFVTPRSVDVYVRRIREKIESDPENPRFLKTVRGA 222 Query: 62 GYRFCGD 68 GYRF Sbjct: 223 GYRFEIP 229 >UniRef50_O07130 Sensory transduction protein regX3 n=97 Tax=Actinobacteria (class) RepID=REGX3_MYCBO Length = 227 Score = 104 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R +L+ ++ G + +T+DV ++R+R E+ P P + T+ G Sbjct: 162 LEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGL 221 Query: 62 GYRFCG 67 GY+ G Sbjct: 222 GYKLEG 227 >UniRef50_B8FSL6 Two component transcriptional regulator, winged helix family n=14 Tax=Bacteria RepID=B8FSL6_DESHD Length = 237 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ENPGK R E+L + G + +T+DV IRR+R+ E P P I TI G Sbjct: 165 LKMFMENPGKALRREEMLNGIWGEDYFGDTKTLDVHIRRLREKIEDNPSDPRYIKTIWGS 224 Query: 62 GYRFCGD 68 GYR+ + Sbjct: 225 GYRWQPE 231 >UniRef50_Q67MV1 Two-component response regulator n=7 Tax=Clostridiales RepID=Q67MV1_SYMTH Length = 229 Score = 104 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG + +R ELL + G + +RTVDV +RRIR+ E P P + T G Sbjct: 162 LELLARHPGVVYTRQELLDLVWGYDFAGDERTVDVHVRRIREKLEEDPSRPRYLRTKWGV 221 Query: 62 GYRFCGDL 69 GY + Sbjct: 222 GYYLEAEP 229 >UniRef50_UPI0001C164FC Two component Transcriptional regulator, Winged helix family n=2 Tax=Nostocaceae RepID=UPI0001C164FC Length = 259 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG+ SR +L++K+ G + R VDV I ++RK E TPE I T+ G Sbjct: 187 ILHFLACHPGQAWSRPQLIQKIWGCDYVGDGRVVDVHIGQLRKKMEVDSSTPEFIKTVRG 246 Query: 61 EGYRFCGDLED 71 GY+F + Sbjct: 247 YGYKFESPEHN 257 >UniRef50_D2BG66 DNA-binding response regulator, two-component system, OmpR family n=8 Tax=Bacteria RepID=D2BG66_DEHSV Length = 256 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 36/63 (57%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 +N ++ SR +LL+K+ G + RTVDV I +R+ E+ P +P + T+ G GY Sbjct: 193 FMVQNRCRVFSREQLLEKVWGYDYPGWTRTVDVHISWLRQKIEADPSSPRHLITVRGTGY 252 Query: 64 RFC 66 +F Sbjct: 253 KFE 255 >UniRef50_Q9F868 Sensory transduction protein regX3 n=47 Tax=Bacteria RepID=REGX3_MYCS2 Length = 228 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R +L+ ++ G + +T+DV ++R+R E P P + T+ G Sbjct: 163 LEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGL 222 Query: 62 GYRFCG 67 GY+ G Sbjct: 223 GYKLEG 228 >UniRef50_B1HYB3 DNA-binding response regulator n=2 Tax=Bacillaceae RepID=B1HYB3_LYSSC Length = 233 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + C+N G++ S+ ++ +++ G + D TV V IR++R+ E P P I T+ G Sbjct: 165 LKYLCDNAGQVLSKEQIYERVWG-DCLFDDNTVMVHIRKLREKIEKNPGKPTCIITVRGI 223 Query: 62 GYRFCGDL 69 GY+ GD+ Sbjct: 224 GYKLVGDV 231 >UniRef50_C0Z8X3 Two-component response regulator n=3 Tax=Firmicutes RepID=C0Z8X3_BREBN Length = 240 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G++ ++A + + + G+E + + V I ++R+ E P P + TI G Sbjct: 173 ILSLLMKHAGRVFTKASIYEHVWGQEYIGDENLIMVYISKLREKIEDNPRKPVYLITIRG 232 Query: 61 EGYRFCG 67 GYRF Sbjct: 233 LGYRFEK 239 >UniRef50_Q03GZ5 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GZ5_PEDPA Length = 234 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N ++ SR ++L+K+ G E R VD+ I +R E+ P P++I TI G Sbjct: 165 LRYLYKNANQVLSRDQILEKVWGYEYGGQTRIVDIHISHLRDKLENDPKHPQLIKTIRGF 224 Query: 62 GYRFCG 67 GY F Sbjct: 225 GYEFVS 230 >UniRef50_Q21EC1 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=Q21EC1_SACD2 Length = 232 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 37/64 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +PG++ SR +LL + G + ++ TV+ I R+R E+ P+ + T+ G Sbjct: 167 LLYMASHPGQVFSREKLLDAVWGYQHSGYEHTVNSHINRLRTKLETDTSNPKYVLTVWGV 226 Query: 62 GYRF 65 GY+F Sbjct: 227 GYKF 230 >UniRef50_Q04N97 Response regulator n=6 Tax=Leptospira RepID=Q04N97_LEPBJ Length = 241 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PGK+ SR +L+ + G E +R +D ++RIR E PE I TI G Sbjct: 166 ILQLMAASPGKVFSREMILEAVWGMEWDGFERMIDSHVKRIRSKLEKNSAQPEWIETIWG 225 Query: 61 EGYRFCGDLED 71 GYRF + ++ Sbjct: 226 IGYRFTDNYDN 236 >UniRef50_C4L703 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillales RepID=C4L703_EXISA Length = 229 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP +I S+ L ++ G D TV V IRR+R+ E P P I T+ G Sbjct: 164 LACFLRNPNRILSKETLFTQVWGESFFGSDNTVMVHIRRLREKVEPNPSEPTYIKTVKGL 223 Query: 62 GYRFC 66 GYR Sbjct: 224 GYRLT 228 >UniRef50_C6LDL3 DNA-binding response regulator YycF n=2 Tax=Firmicutes RepID=C6LDL3_9FIRM Length = 237 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP + SR +L +K+ G + TV V I RIR+ E P+I+ T+ G Sbjct: 171 LKFLAMNPNIVFSREQLFEKIWGYDYVGDSVTVMVHINRIREKIEDDSKNPKILETVWGA 230 Query: 62 GYRFCGD 68 GYRF D Sbjct: 231 GYRFNKD 237 >UniRef50_B8FYB6 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfitobacterium hafniense RepID=B8FYB6_DESHD Length = 237 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +NP ++ +R ELL + G + RTVDV IRR+R S P E + T+ G Sbjct: 164 LYHLAQNPQRVFTREELLGAVWGYDYFGDQRTVDVHIRRLRTKLASLP--HEYLQTVWGV 221 Query: 62 GYRFCGDLE 70 GY+F ++ Sbjct: 222 GYKFTPPVK 230 >UniRef50_B0TE19 Transcriptional regulator, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TE19_HELMI Length = 234 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E P ++ + A++ + + G+E D TV V I R+R E P P+ + T+ G Sbjct: 167 LKYLAERPNRVVTIAQIYESVWGKEFIHDDNTVMVHISRLRNKIEEDPANPQRLQTVRGL 226 Query: 62 GYRFC 66 GYR Sbjct: 227 GYRLV 231 >UniRef50_C6VLR9 Response regulator n=52 Tax=Firmicutes RepID=C6VLR9_LACPJ Length = 242 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F E G++ SR +L + G + R VD+ I +R+ E+ P P +I T+ G Sbjct: 173 LVYFVEREGRVLSRDAILNHVWGYDYASETRIVDIHISHLREKIEADPKQPRLIRTVRGF 232 Query: 62 GYRFCGD 68 GY F GD Sbjct: 233 GYEFVGD 239 >UniRef50_C4L1R5 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L1R5_EXISA Length = 230 Score = 102 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +P ++ + ++ + + G D TV V I +IR+ E TP P II T+ G Sbjct: 166 ILAYFMRHPNQVLTVEQIYEAVWGEAAFEVDNTVMVHITKIREKLEDTPRKPTIIKTVWG 225 Query: 61 EGYRF 65 GYR Sbjct: 226 VGYRL 230 >UniRef50_C8W6G9 Putative two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W6G9_DESAS Length = 277 Score = 102 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P +I +R LL + + D TV V IRR+RK E P+ P I T+ G Sbjct: 210 LWLMASHPNQIFTRNNLLTTIWEADSAGDDNTVTVHIRRLRKKIEVNPNKPRYIKTVWGV 269 Query: 62 GYRFC 66 GYRF Sbjct: 270 GYRFE 274 >UniRef50_B8I272 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiaceae RepID=B8I272_CLOCE Length = 237 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++P + S +L + G + RTV V I +RK E P P++I TI G Sbjct: 166 ILSLLSQHPNMVFSLTQLYDHIWGVDNIGDTRTVMVHISNLRKKIEKDPANPKLIVTIKG 225 Query: 61 EGYRFCG 67 GY+ Sbjct: 226 IGYKLDT 232 >UniRef50_A5UYZ0 Two component transcriptional regulator, winged helix family n=17 Tax=Bacteria RepID=A5UYZ0_ROSS1 Length = 236 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 39/66 (59%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ SR +LL +++G + +RT+DV IR +R E+ P P+ I T++G Sbjct: 159 ILATLMAAPGQVFSRLDLLDRVSGDAFEGSERTIDVHIRNLRAKIEADPRHPQYIETVYG 218 Query: 61 EGYRFC 66 GYRF Sbjct: 219 MGYRFA 224 >UniRef50_Q38WB3 Two component system, response regulator n=58 Tax=Firmicutes RepID=Q38WB3_LACSS Length = 246 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP ++ SR +LL+ + + +RTVD I+++R+ E P++I T+ G Sbjct: 177 LKTLAKNPRQVFSREQLLELVWDYQYFGDERTVDAHIKKLRQKIEEVG--PQVIQTVWGV 234 Query: 62 GYRFC 66 GY+F Sbjct: 235 GYKFD 239 >UniRef50_A3I5H1 DNA-binding response regulator n=2 Tax=Bacillaceae RepID=A3I5H1_9BACI Length = 235 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N ++ S+++LL + G + + T+ V IRRIR+ E P P + T+ G Sbjct: 166 LFFLAKNRNQVFSKSQLLDAVWGYDTYGDENTITVYIRRIREKIEINPSHPVYLQTVWGV 225 Query: 62 GYRFCG 67 GY+F Sbjct: 226 GYKFST 231 >UniRef50_P94413 Uncharacterized transcriptional regulatory protein yclJ n=77 Tax=Bacilli RepID=YCLJ_BACSU Length = 227 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +NP ++ SR +LL+++ G + +RTVDV I+R+RK + + T+ G Sbjct: 163 LYYLVQNPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRKKL--ASEDKPFLYTVWGV 220 Query: 62 GYRFCGD 68 GY+F D Sbjct: 221 GYKFDED 227 >UniRef50_C4IFN3 Transcriptional regulator n=15 Tax=Bacteria RepID=C4IFN3_CLOBU Length = 167 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G + ++ ++ + + D + IR++RK E PD P I TI G Sbjct: 99 ILYFLAQNQGTVFTKEQIYNAVWDEDYFLSDSNIMAFIRKLRKKIEPNPDEPIYIITIWG 158 Query: 61 EGYRFC 66 GY+F Sbjct: 159 VGYKFN 164 >UniRef50_D2LZ20 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZ20_BACS4 Length = 236 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ EN + S ++ ++ G + +TV V I +R+ E P P++I T+ G Sbjct: 164 LMLLVENKNHVFSAEKIYDQIWGIDHCGDLKTVMVHISNLRRKIEENPSKPKLIKTVRGF 223 Query: 62 GYRFCGDLED 71 GY+F ED Sbjct: 224 GYKFSTADED 233 >UniRef50_A1HRL8 Two component transcriptional regulator, winged helix family n=2 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRL8_9FIRM Length = 231 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 42/67 (62%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR +L++K+ + ++RTVD I+ +RK ++PD P I TI+G Sbjct: 162 LELFLAHPGQVFSRLQLIEKVQDYAFEGYERTVDSHIKNLRKKLGASPDEPHYIKTIYGV 221 Query: 62 GYRFCGD 68 GY+ G+ Sbjct: 222 GYKLVGE 228 >UniRef50_C4W819 Two component transcriptional regulator, winged helix family n=3 Tax=Staphylococcus RepID=C4W819_STAWA Length = 225 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N +I S+ ++ K+ G E D T+ V IR +R+ E P+ P+ I T+ G+ Sbjct: 156 LYFFISNKNQILSKEQIYSKVWGYETFVDDNTLMVHIRTLRRKIEENPNQPKFIKTMRGK 215 Query: 62 GYRFCGDLED 71 GY F G+ + Sbjct: 216 GYIFKGENHE 225 >UniRef50_UPI000050FEDE response regulator receiver protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FEDE Length = 327 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +R E+L + G + RTVDV +RR+R + I T+ Sbjct: 200 LKFFALHPERVFTRDEILLAVWGDDYFGGTRTVDVHVRRVRAKLGKDFENA--IHTVRYV 257 Query: 62 GYRFCGD 68 GYRF D Sbjct: 258 GYRFSPD 264 >UniRef50_A1SKV6 Response regulator receiver n=7 Tax=Bacteria RepID=A1SKV6_NOCSJ Length = 232 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ SRA+LL+++ G + +R VDV IR +R P +IAT+ G Sbjct: 164 LHALVRAPGRVFSRAQLLEQVWGNDFYGDERVVDVHIRNLRAELGDDATDPHLIATVRGV 223 Query: 62 GYRFCGDLE 70 GY+F G Sbjct: 224 GYKFIGRPR 232 >UniRef50_B5Y819 DNA-binding response regulator YycF n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y819_COPPD Length = 236 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ +R LL ++ G + RT+DV I+ +R E P+ P+ I T+ G Sbjct: 166 LRILMSRAGEVLTREYLLNEIWGADYYGDKRTLDVHIKWLRDKIEPNPNEPKYILTVRGV 225 Query: 62 GYRFCGDLE 70 GY+F GD+ Sbjct: 226 GYKFNGDVR 234 >UniRef50_Q63F03 Response regulator n=15 Tax=Firmicutes RepID=Q63F03_BACCZ Length = 240 Score = 101 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +NP +I S+A L + + G +D + V +R +R+ E P P + T+ G Sbjct: 169 ILLFLIKNPNQIFSKARLYEAVWGETYLGNDNIMMVHMRHLREKIEDNPSKPNYLITVRG 228 Query: 61 EGYRFCGDLE 70 GY+ + Sbjct: 229 LGYKLNTKGD 238 >UniRef50_A5UPS1 Two component transcriptional regulator, winged helix family n=7 Tax=Chloroflexi RepID=A5UPS1_ROSS1 Length = 245 Score = 101 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G SR LL+++ G + +RT+DV +R +R+ E P P +I T+ G Sbjct: 162 LACLMHNAGVALSRDLLLERVWGSDFLGSNRTIDVHVRWLREKLEPDPANPTLIRTVRGI 221 Query: 62 GYRFCGDLED 71 GY F D Sbjct: 222 GYCFQDPATD 231 >UniRef50_Q892Y1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP n=1 Tax=Clostridium tetani RepID=Q892Y1_CLOTE Length = 175 Score = 101 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 35/67 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F EN K SR ELL + G + + VDV IRR+R E P P+ I T+ G Sbjct: 108 ILKIFLENEEKAFSRDELLDLVWGYDFVGDPKIVDVNIRRLRAKIEDEPSNPKYIETVWG 167 Query: 61 EGYRFCG 67 +GYR+ Sbjct: 168 KGYRWRK 174 >UniRef50_A7ZAG8 MrsR2 n=2 Tax=Bacillus RepID=A7ZAG8_BACA2 Length = 240 Score = 101 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++FCE+P +I S+ ++ K + G E D TV V +RR+R+ E P P I T+ G+ Sbjct: 168 LIYFCEHPNQILSKHQIYKDVWG-EFYGGDSTVMVHVRRLREKLEEDPSRPRWIKTVRGQ 226 Query: 62 GYRFCGDL 69 GY F + Sbjct: 227 GYIFEAEP 234 >UniRef50_A8ZYB8 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYB8_DESOH Length = 234 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G +R LL +GR+ + DR++DV I RIRK E P P I T+ G Sbjct: 168 ILNALISHKGTPLTRDRLLDLASGRDFETFDRSIDVHISRIRKKLEDDPSAPRYIKTVWG 227 Query: 61 EGYRFC 66 +GY + Sbjct: 228 KGYMWA 233 >UniRef50_B3QW38 Two component transcriptional regulator, winged helix family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW38_CHLT3 Length = 239 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NPG+ SR ELL + G ++ TV+ I R+R E P P+ I T+ G Sbjct: 168 LSLFMKNPGRTYSRTELLDLVWGASYSGYEHTVNSHINRLRMKIEENPAKPKYILTVWGV 227 Query: 62 GYRFCGDLE 70 GY+F L+ Sbjct: 228 GYKFNNQLK 236 >UniRef50_B7CCF4 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B7CCF4_9FIRM Length = 233 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +NP +I S +L +K + T+ V IR +RK E P P I TI Sbjct: 167 ILSTLMKNPKQIFSAEQLYEKAWNEPYYYSANNTIMVHIRNLRKKIEKDPANPVYIKTIW 226 Query: 60 GEGYRFC 66 G+GYRF Sbjct: 227 GKGYRFE 233 >UniRef50_C8WP93 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WP93_EGGLE Length = 235 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 36/71 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +PG + S+ +L++ G+E ++ V I+++R+ E P P +I T+ G Sbjct: 164 IFFALASSPGLVLSKEQLVEAAWGKEFVGETSSITVFIKKLREKVEDDPSDPRVIQTVWG 223 Query: 61 EGYRFCGDLED 71 GYRF + + Sbjct: 224 IGYRFEPEGRE 234 >UniRef50_D0AFB3 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=D0AFB3_ENTFC Length = 103 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ ++ +L + + G + P+ + IR++RK E PD P+ I T+ G Sbjct: 35 LYFMYSHKGQVFTKEQLYQNVWGDDDIPNANNMTSFIRKLRKKIEPNPDNPQYILTVWGV 94 Query: 62 GYRFCGD 68 GY+F + Sbjct: 95 GYKFSEE 101 >UniRef50_P72948 OmpR subfamily n=21 Tax=Bacteria RepID=P72948_SYNY3 Length = 245 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 37/68 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ +R +L++K+ G + +R VD IRR+RK E P P I T+ G Sbjct: 178 LATFMSYPGRVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGL 237 Query: 62 GYRFCGDL 69 GY+F Sbjct: 238 GYKFEDPD 245 >UniRef50_B1C9A4 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9A4_9FIRM Length = 226 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ EN G++ +R ELL ++ G + + RT+D+ ++ +R S D + I TI G Sbjct: 161 ILLYMLENKGRVVTREELLNEVWGYDFEGESRTLDMHMKTLRNKIGSEDDKYKYIKTIRG 220 Query: 61 EGYRF 65 GY+ Sbjct: 221 IGYKL 225 >UniRef50_C7G9Y4 DNA-binding response regulator n=6 Tax=Bacteria RepID=C7G9Y4_9FIRM Length = 167 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G + S+ ++ + V IR IR+ E P P I T+ G Sbjct: 97 ILKLLAKHSGIVFSKEQIYDIVWKESYSGDYNIVMSHIRNIREKIEDNPSKPIYIQTVWG 156 Query: 61 EGYRFCGD 68 GYRF + Sbjct: 157 VGYRFNKN 164 >UniRef50_C9YME3 Two-component response regulator n=32 Tax=Firmicutes RepID=C9YME3_CLODR Length = 247 Score = 100 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 39/68 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ ++ GKI ++ ++ +++ G E D + I R+RK E P +P+ I T+ G Sbjct: 180 LLYCAKHQGKILTKQQIYEEVWGEEYFYDDSNIMAIISRLRKKLEVNPSSPKYIQTVKGI 239 Query: 62 GYRFCGDL 69 GYRF ++ Sbjct: 240 GYRFNKEV 247 >UniRef50_C6PZ92 Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZ92_9CLOT Length = 235 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 38/65 (58%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NP K+ +++++ + G++ +D TV V I+R+R E D+PE I+T+ G Sbjct: 169 ILKLFLLNPNKVFTKSQIYDSIWGQDALRNDNTVMVHIKRLRDKIEHDADSPEYISTVWG 228 Query: 61 EGYRF 65 GY+ Sbjct: 229 VGYKL 233 >UniRef50_A1Z6C8 Response regulator receiver n=1 Tax=Sulfobacillus acidophilus RepID=A1Z6C8_9FIRM Length = 229 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR LL ++ G + RTVDV + R+R+ ++ E + T+ G+ Sbjct: 159 LYFLASHPKQVFSREHLLDRVWGLDFDGDSRTVDVHVTRLRQKLLASNTPYEYLETVWGQ 218 Query: 62 GYRFC 66 GYRF Sbjct: 219 GYRFV 223 >UniRef50_A9CWP6 Putative response regulator n=1 Tax=Shewanella benthica KT99 RepID=A9CWP6_9GAMM Length = 181 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++P ++ SR +LL+ + G ++ TV+ I R+R T +++ T+ G Sbjct: 109 LLFMAKHPKQVFSRMQLLEAVWGYSYSGYEHTVNSHINRLRAKLSHCASTADLVKTVWGV 168 Query: 62 GYRFCGDLE 70 GY+F + Sbjct: 169 GYKFSPPTQ 177 >UniRef50_B2A1Z8 Two component transcriptional regulator, winged helix family n=2 Tax=Firmicutes RepID=B2A1Z8_NATTJ Length = 233 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP ++ +R E+L+K+ G RTVD ++RIRK E +I T+ G Sbjct: 165 LYLLIKNPERVFTREEILEKIWGFSFAGGTRTVDEHVKRIRKKLEPESGFDSLIQTVWGV 224 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 225 GYKFEVKNE 233 >UniRef50_B5YEK3 Response regulator DrrA n=5 Tax=Bacteria RepID=B5YEK3_DICT6 Length = 232 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 35/71 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG++ +R ++K + G R VDV IR +R+ E P P+ I T+ Sbjct: 159 ILKLLLSSPGRVWTRDMIIKHIWGENFWGEPRAVDVYIRWLREKVEDDPSHPKYIITVRN 218 Query: 61 EGYRFCGDLED 71 GY+F ED Sbjct: 219 LGYKFQEGNED 229 >UniRef50_A9AYM0 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AYM0_HERA2 Length = 231 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 38/70 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG + SR +LL + +G+ + ++RT+DV IR +R E P P I T++G Sbjct: 160 ILATLMASPGHVFSRLDLLDRTSGQAYEGYERTIDVHIRNLRSKIEPDPKNPRYIETVYG 219 Query: 61 EGYRFCGDLE 70 GYRF Sbjct: 220 VGYRFARPKR 229 >UniRef50_Q488W3 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q488W3_COLP3 Length = 260 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 35/64 (54%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 FC++P ++ SRA+LL + G ++ TV+ I R+R E P+II T+ G GY Sbjct: 186 FFCQHPDQVFSRAQLLDGVWGYHHNGYEHTVNSHINRLRSKLEEDCTEPKIIQTVWGVGY 245 Query: 64 RFCG 67 + Sbjct: 246 KLNS 249 >UniRef50_A0KCT7 Two component transcriptional regulator, winged helix family n=55 Tax=cellular organisms RepID=A0KCT7_BURCH Length = 239 Score = 100 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PGK+ SR +LL + G + + ++ TV+ I R+R E+ P P I T+ G Sbjct: 168 LYFFARHPGKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAEPVRILTVWGR 227 Query: 62 GYRFCGDLE 70 GY+ + Sbjct: 228 GYKLAAPGQ 236 >UniRef50_A7Z5A0 YvrH n=28 Tax=Firmicutes RepID=A7Z5A0_BACA2 Length = 267 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 38/63 (60%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 +F ++P ++ S+ L + + G + D TV V IRR+R+ E+TP P+ + T+ G GY Sbjct: 201 YFLQHPNRVISKETLYQAVWGEDFFGSDNTVMVHIRRLREKIENTPSKPDFLVTVKGLGY 260 Query: 64 RFC 66 +F Sbjct: 261 KFV 263 >UniRef50_D1C683 Two component transcriptional regulator, winged helix family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C683_SPHTD Length = 231 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P ++ +R +L +++ G TV V I R+R+ E P P I T+ G Sbjct: 164 LQLFAEHPRQVFTREQLFQRLWGE--FGDRHTVTVHIGRLREKIEEDPANPRYIVTVWGV 221 Query: 62 GYRFCGDLE 70 GYRF G+ Sbjct: 222 GYRFDGEAR 230 >UniRef50_C2E0K8 Response regulator PhoP n=9 Tax=Lactobacillus RepID=C2E0K8_9LACO Length = 238 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N G + SR +LL+K+ G +L R VD+ I +R E P+ I T G Sbjct: 174 LVYLAQNKGNVISREQLLQKIWGYDLLGSSRIVDIHISHLRDKLEDDSSHPQHILTKRGF 233 Query: 62 GYRFC 66 GYRF Sbjct: 234 GYRFI 238 >UniRef50_Q1AZL3 Two component transcriptional regulator, winged helix family n=24 Tax=Bacteria RepID=Q1AZL3_RUBXD Length = 227 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR ++L + P VDV +R +R+ P P +I T+ G Sbjct: 158 LEYLMRHPRQVLSRQQILSAVWDYAFDPGSNVVDVYVRYLRRKL-DRPGEPSLITTVRGA 216 Query: 62 GYRFCGDLED 71 GYRF E+ Sbjct: 217 GYRFDPPREE 226 >UniRef50_Q0HYY3 Two component transcriptional regulator, winged helix family n=6 Tax=Shewanella RepID=Q0HYY3_SHESR Length = 253 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL + G + TV+ I R+R P + E++ T+ G Sbjct: 180 LTFLARHPQQVFSRTQLLDAVWGYRFDGFEHTVNSHINRLRGKLAHIPGSRELVQTVWGV 239 Query: 62 GYRFC 66 GY+F Sbjct: 240 GYKFT 244 >UniRef50_A7B4Z9 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A7B4Z9_RUMGN Length = 236 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP K+ SR L +++ D TV+V + +RK + I T+ G Sbjct: 171 ILYLLIQNPQKVYSREHLYEQVWKGGYYGEDNTVNVHVSNLRKKIQKADKEESYIKTVWG 230 Query: 61 EGYRFC 66 G++ Sbjct: 231 IGFKLE 236 >UniRef50_D2RD26 Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RD26_GARVA Length = 296 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ++P ++ +R LL+++ G + RTVDV IRR+R + +I T+ Sbjct: 205 LKYFVQHPRRVFTRTHLLQEVWGYDYYGGTRTVDVHIRRLRAKLGVEYEH--LIGTVRNV 262 Query: 62 GYRFCGDLED 71 GYRF D Sbjct: 263 GYRFDPSESD 272 >UniRef50_UPI00017F4CF5 two-component response regulator n=2 Tax=Clostridium difficile RepID=UPI00017F4CF5 Length = 124 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N +I S+ +L K+ G + D T+ V IR+IR+ E P PE I TI G Sbjct: 55 ILSLFAHNQNQIISKEKLWDKVWGEDYVGFDNTIMVHIRKIREKLEDNPSKPEYILTIKG 114 Query: 61 EGYRFCGDLE 70 GY+ + Sbjct: 115 LGYKLAVKED 124 >UniRef50_C0D8Y6 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C0D8Y6_9CLOT Length = 243 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F N G++ ++ +L + + G + + V I +R E P +P I T+ G G Sbjct: 176 KLFISNVGRVFTKEQLYELVWG-NSIVDENAIMVYISHLRNKIEDNPKSPRYIKTVWGLG 234 Query: 63 YRFC 66 Y+F Sbjct: 235 YKFT 238 >UniRef50_C6CSH8 Two component transcriptional regulator, winged helix family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSH8_PAESJ Length = 240 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F +PGK+ SR EL+ + G + DR +DV I +RK E P P +I T+ G G Sbjct: 169 KLFLSHPGKVFSREELINTIRGFDSFVTDRAIDVHIVNLRKKIEQNPKEPRLIRTVWGFG 228 Query: 63 YRFCGD 68 Y++ D Sbjct: 229 YKYTTD 234 >UniRef50_P42244 Uncharacterized transcriptional regulatory protein ycbL n=84 Tax=Firmicutes RepID=YCBL_BACSU Length = 226 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 34/64 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP K+ ++ ++ + + E ++V +RR+R+ E P +P+ I T+ G Sbjct: 160 LCLFASNPKKVFTKEQIYRSVWNEEYFDDQNIINVHMRRLREKIEDDPSSPQYIKTLWGI 219 Query: 62 GYRF 65 GY+ Sbjct: 220 GYKL 223 >UniRef50_UPI0001692EE0 response regulator n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692EE0 Length = 230 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP + EL +K+ + RT+ V + +RK E P P+ I T+ G Sbjct: 165 LSLLASNPNHVFRIEELFEKVWSVDSLGDPRTLIVHVSNLRKKIEPNPADPKYIITVRGV 224 Query: 62 GYRFCG 67 GY+F G Sbjct: 225 GYKFNG 230 >UniRef50_C4Z0U9 Two-component system, OmpR family, phosphate regulon response regulator OmpR n=3 Tax=Clostridiales RepID=C4Z0U9_EUBE2 Length = 238 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 37/65 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGK+ SR LLK + G++ RTVDV +RR+R+ E+ P P+ + T G Sbjct: 173 LEILAVNPGKVYSRDNLLKAVWGQDYTGDARTVDVHMRRLREKIENNPSEPKYVHTKWGV 232 Query: 62 GYRFC 66 GY F Sbjct: 233 GYYFN 237 >UniRef50_B4WRK5 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRK5_9SYNE Length = 262 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ +R++L+ K+ G + +R VD I R+RK E P P + T+ G Sbjct: 196 LATFMSYPGRVWNRSQLIDKLWGEDFFGDERVVDTHIARLRKKIEPDPSAPTFVKTVVGV 255 Query: 62 GYRFCGD 68 GYRF + Sbjct: 256 GYRFEDE 262 >UniRef50_D0MGG0 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGG0_RHOM4 Length = 246 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ +R +LL+ + RT+D I IRK E P I T++G Sbjct: 168 VLRYLIHHRGEVVTREQLLRDVWHIVGDVETRTIDRHIASIRKKIEPDLRQPRYIETVYG 227 Query: 61 EGYRFCGDLE 70 +GYR + + Sbjct: 228 KGYRLRAEDQ 237 >UniRef50_C3ALG3 Two-component response regulator n=5 Tax=Bacillales RepID=C3ALG3_BACMY Length = 238 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 33/69 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG+I ++ ++ + + D T+ V I R+R+ E P P + TI G Sbjct: 166 LKLFMGEPGRIFTKKQIFENVWSDHYYSDDNTIMVQISRLREKIEDHPRNPVYLKTIRGL 225 Query: 62 GYRFCGDLE 70 GYRF E Sbjct: 226 GYRFAKKEE 234 >UniRef50_Q97MA9 Response regulator (CheY domain, HTH domain) n=1 Tax=Clostridium acetobutylicum RepID=Q97MA9_CLOAB Length = 235 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 34/64 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + EN I S+ +++ + + +D T+ V IR++R+ E P P+ I T+ G Sbjct: 170 LKYLVENKNIILSKEKIVNAVWEDDYVGYDNTIMVHIRKLRQKLEDDPSNPKYILTVKGL 229 Query: 62 GYRF 65 GY+ Sbjct: 230 GYKL 233 >UniRef50_C6CSM8 Two component transcriptional regulator, winged helix family n=6 Tax=Bacillales RepID=C6CSM8_PAESJ Length = 246 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK+ SR++LL ++ TV V +RR+R+ E P P I T+ G Sbjct: 176 LHLLAMYPGKVFSRSQLLNQVWDIAFDGDTTTVTVHVRRLREKIEPNPSDPTWIKTVWGI 235 Query: 62 GYRFC 66 GY+ Sbjct: 236 GYKLD 240 >UniRef50_C2W6L0 Two-component response regulator n=5 Tax=Firmicutes RepID=C2W6L0_BACCE Length = 250 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C +P +I + +L +++ G D+TV + I ++RK E P P I + G Sbjct: 180 LTFLCTHPNRIFTAEQLYEQVWGLTSIGDDKTVVMHISKLRKKIEENPKLPTYIVNLRGI 239 Query: 62 GYRFCGDLED 71 GY+F ++ Sbjct: 240 GYKFIPHTKE 249 >UniRef50_C6CZ95 Two component transcriptional regulator, winged helix family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ95_PAESJ Length = 238 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L C++ GK+ SR +LL + R VDV I +R E TPE I T+ Sbjct: 164 LLFLCKHRGKVLSRQQLLHGVWDYHFLGDTRIVDVHISHLRDKIEQNARTPEYIMTVRNV 223 Query: 62 GYRFCGD 68 GY+ Sbjct: 224 GYKLHAP 230 >UniRef50_B1JFX2 Two component transcriptional regulator, winged helix family n=30 Tax=Bacteria RepID=B1JFX2_YERPY Length = 235 Score = 98.7 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + ++ G++ +R L + G + P RT+D I ++RK E P P +I T+HG Sbjct: 162 ILRYLYQHKGRVITRDMLFDAVWGYDHLPQSRTLDQHISKLRKTIELDPVHPVLIRTVHG 221 Query: 61 EGYRFCG 67 GYR+ G Sbjct: 222 AGYRYQG 228 >UniRef50_A0LVZ4 Two component transcriptional regulator, winged helix family n=13 Tax=Actinomycetales RepID=A0LVZ4_ACIC1 Length = 245 Score = 98.7 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ SR +LL+++ G + R VDV +RR+R E P P I+ T+ G Sbjct: 178 LCELASAPDRVYSREQLLERVWGYDYFGDGRIVDVHVRRLRTKIEEDPAHPRILVTVRGL 237 Query: 62 GYRFCG 67 GY+ Sbjct: 238 GYKIQP 243 >UniRef50_C9KN64 DNA-binding response regulator VicR n=2 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN64_9FIRM Length = 233 Score = 98.7 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+P + SR L +++ G E TV V I RIR+ E P P + TI G Sbjct: 164 LAFLAEHPNIVFSREALFERVWGAEALGDSATVMVHINRIREKIEEDPAHPRYLETIRGA 223 Query: 62 GYRFC 66 GYRF Sbjct: 224 GYRFR 228 >UniRef50_B4U3Y8 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=36 Tax=Bacilli RepID=B4U3Y8_STREM Length = 247 Score = 98.7 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 36/64 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ ++P +R LL+++ G + R VDV I ++R+ E P P+ I TI G Sbjct: 175 LLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGY 234 Query: 62 GYRF 65 GY+F Sbjct: 235 GYKF 238 >UniRef50_A0Y0H8 DNA-binding response regulator n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y0H8_9GAMM Length = 241 Score = 98.7 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F +P + SR +LL K+ G + ++ TV+ I R+R E TP II T+ G Sbjct: 173 LVYFARHPNHVFSRQQLLDKVWGYQHSGYEHTVNSHINRLRAKLELHQSTP-IIETVWGV 231 Query: 62 GYRFCG 67 GY+ Sbjct: 232 GYKLNP 237 >UniRef50_Q5WGW1 Two-component response regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WGW1_BACSK Length = 228 Score = 98.7 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +PG++ ++ EL + + RTV V ++ +R + P+ I T+ G Sbjct: 160 LLFLANHPGRVFTKEELYAAVWNGDGF-DSRTVTVHVKNVRHKLKDGTKHPKYIETVWGV 218 Query: 62 GYRFCG 67 GY+F G Sbjct: 219 GYKFIG 224 >UniRef50_A5UT44 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=A5UT44_ROSS1 Length = 261 Score = 98.7 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT--PEIIATIH 59 + +PG++ SR ELL+++ G + RTVDV + R+R E + +I+T Sbjct: 174 LHLLASHPGRVFSREELLERVWGYSYMGNTRTVDVHVNRLRHKLELAGEGSCNNMISTEW 233 Query: 60 GEGYRFCGD 68 G GY+ Sbjct: 234 GAGYKLESP 242 >UniRef50_Q5WBT6 Two-component response regulator n=3 Tax=Bacillaceae RepID=Q5WBT6_BACSK Length = 238 Score = 98.3 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + FCENP +I + A+L +++ G ++ ++TV + I ++RK P+II + G Sbjct: 165 LHFFCENPNRIFTTAQLYERVWGNDVFGEEKTVTIHISKLRKKLGDDTRKPKIIVNLRGI 224 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 225 GYKFIPPNE 233 >UniRef50_C0QG14 Response regulator, CheY-like receiver domain protein n=4 Tax=Bacteria RepID=C0QG14_DESAH Length = 247 Score = 98.3 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + P ++ SR +LL + GR DR+VDV I +R+ P P I T+ Sbjct: 176 LLTLAKFPARVLSRDQLLDAVAGRSYDVFDRSVDVHISSLRRKLGEDPRNPRFIQTVRTV 235 Query: 62 GYRFCGDL 69 GY F Sbjct: 236 GYMFNDPD 243 >UniRef50_C8WVL8 Two component transcriptional regulator, winged helix family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WVL8_ALIAD Length = 233 Score = 98.3 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 40/67 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +P ++ SR EL++++ G + + RT+D ++ +R E P +P I T++G Sbjct: 165 LVILSRHPRRVFSREELIERVFGMDFRGDVRTIDAHVKNLRAKIEDDPKSPVYIQTVYGM 224 Query: 62 GYRFCGD 68 GYRF GD Sbjct: 225 GYRFGGD 231 >UniRef50_A9KR75 Two component transcriptional regulator, winged helix family n=64 Tax=Firmicutes RepID=A9KR75_CLOPH Length = 238 Score = 98.3 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +P ++ +R +LL + G E RTVDV I+R+R+ + ++T+ G G Sbjct: 173 YFLASHPNQVFTREQLLDHIWGYEYIGDTRTVDVHIKRLREKIKDHIS--WRLSTVWGIG 230 Query: 63 YRFC 66 Y+F Sbjct: 231 YKFE 234 >UniRef50_A8VSS8 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VSS8_9BACI Length = 229 Score = 98.3 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LHF ++P ++ + +L ++ + + TV V I +R+ E TP+ PE I T+ G Sbjct: 161 LLHFAKHPNQVWTHEQLYDRIWNLDATGYVETVKVHISHLRRKIERTPNRPEYIQTVRGF 220 Query: 62 GYRFCG 67 GYRF Sbjct: 221 GYRFVP 226 >UniRef50_Q3Z7C3 Transcriptional regulator, putative n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z7C3_DEHE1 Length = 238 Score = 97.9 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R LL+ + G + RTVDV IRR+R + I T+ G Sbjct: 169 LKYLASNRGRVYTRESLLETIWGFDYYGGTRTVDVHIRRLRSKIGD--FNEKYIKTVRGV 226 Query: 62 GYRFCG 67 GY F Sbjct: 227 GYTFRA 232 >UniRef50_A9AXY0 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXY0_HERA2 Length = 225 Score = 97.9 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P +I SR +LL+ + + DR++D I R+R+ E P+ I T++G Sbjct: 160 LATFMRHPNQILSREQLLEAVFAGDYAGFDRSLDAHIARLRQRIEHDRTNPQYIVTVYGL 219 Query: 62 GYRFC 66 GY+F Sbjct: 220 GYKFV 224 >UniRef50_C6PCZ0 Two component transcriptional regulator, winged helix family n=4 Tax=Clostridia RepID=C6PCZ0_CLOTS Length = 231 Score = 97.9 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG++ S+ ++ +K+ G + + TV I+ IR E+ E I T+ G Sbjct: 163 VLELLSLHPGQVFSKEQIYEKVWGFDAEGDTTTVTEHIKNIRAKIENLDPDTEYIKTVWG 222 Query: 61 EGYRFCG 67 GY++ Sbjct: 223 IGYKWEK 229 >UniRef50_Q7NGM9 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NGM9_GLOVI Length = 229 Score = 97.9 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G+ R ++ +++ G + +RT+D I R+R E P P I T+HG Sbjct: 160 VLECLFRSAGQTVDREKIYQEVWGYDTAVTNRTIDFHIARLRSKLEDNPKEPRYILTVHG 219 Query: 61 EGYRFCGDL 69 GYRF Sbjct: 220 SGYRFVVPE 228 >UniRef50_C6IXU0 Transcriptional regulator domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXU0_9BACL Length = 265 Score = 97.9 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E+ G + SR ELL ++ G VDV I+ +RK P I T+ G Sbjct: 200 LIKLLEHEGTVLSREELLSEVWGTTFLGGSNVVDVHIKSLRKKLGDNASRPTYITTVRGV 259 Query: 62 GYRFC 66 GYR Sbjct: 260 GYRLA 264 >UniRef50_A9AWM9 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWM9_HERA2 Length = 232 Score = 97.9 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R LL ++ G + RTVDV IRR+R +I T G Sbjct: 166 LAYLASHPGQVFTREVLLGQVWGYDEYVDARTVDVHIRRLRSKLSEIDAESNLIQTEWGI 225 Query: 62 GYRFC 66 GYRF Sbjct: 226 GYRFI 230 >UniRef50_P45606 Phosphate regulon transcriptional regulatory protein phoB n=201 Tax=Proteobacteria RepID=PHOB_SHIDY Length = 229 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR +LL + G + DRTVDV IRR+RK E ++ T+ G Sbjct: 163 LHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEP-GGHDRMVQTVRGT 221 Query: 62 GYRFCG 67 GYRF Sbjct: 222 GYRFST 227 >UniRef50_C5D1A0 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=C5D1A0_VARPS Length = 248 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 42/68 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR LL++ GRE P DRT+DV + R+RK E+ PD P+I+ ++ G Sbjct: 178 LCAFARHPGRVLSRDFLLEQTRGREASPFDRTIDVQVGRLRKKIEADPDEPQIVKSVRGA 237 Query: 62 GYRFCGDL 69 GY + Sbjct: 238 GYILVPPV 245 >UniRef50_B4WME0 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WME0_9SYNE Length = 236 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R ++L+ + G + P VDV I+R+RK I ++ G Sbjct: 170 LEYLMRSPGRVFTRTQMLEHVWGYDFNPSTNVVDVCIQRLRKKI-DMKGNERWIESVRGV 228 Query: 62 GYRFC 66 GYRF Sbjct: 229 GYRFR 233 >UniRef50_Q1AYG8 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYG8_RUBXD Length = 229 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ R LL+++ G + +RTV+V ++R+R P P++I T+ G Sbjct: 161 LYTLARSPGRVFPRGTLLRQVWGEDEYIDERTVNVYVQRLRNKLGDDPSDPKLIETVRGF 220 Query: 62 GYRFCGDL 69 GYR Sbjct: 221 GYRLVRPE 228 >UniRef50_B8G223 Two component transcriptional regulator, winged helix family n=11 Tax=Clostridia RepID=B8G223_DESHD Length = 234 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+P ++ +R +L M E T+ V IR++R+ E P P+ I T+ G Sbjct: 169 LTFMAEHPDQVFTREQLFAHMWRDEYVNDTSTITVFIRKLREKIERDPAKPQYIQTVWGI 228 Query: 62 GYRFC 66 GY+F Sbjct: 229 GYKFS 233 >UniRef50_D0WFD8 DNA-binding response regulator VicR n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WFD8_9ACTN Length = 242 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+PG + S+ +L + G+E T+ V ++++R E P P II T+ G Sbjct: 168 IIRTLMEHPGVVFSKNQLTEAGWGKEFVGETTTITVFMKKLRSKVEDDPTDPRIIETVWG 227 Query: 61 EGYRFCGD 68 GYR D Sbjct: 228 VGYRLDAD 235 >UniRef50_Q67RH7 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67RH7_SYMTH Length = 231 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG +R LL ++ + TV V IRR+R+ E P P I T+ G Sbjct: 162 LWLMASHPGHPFTRESLLARVWHGDAPTDQSTVTVCIRRLREKIEDNPAQPRWIKTVWGI 221 Query: 62 GYRFCG 67 GY+F Sbjct: 222 GYKFDP 227 >UniRef50_D1YA87 Transcriptional regulatory protein, C-terminal domain protein n=2 Tax=Propionibacterium acnes RepID=D1YA87_PROAC Length = 237 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R LL + G + RTVDV IRR+R P+ I T+ Sbjct: 172 LKYLVGHPGRVLTRDLLLSDVWGYDYYGGTRTVDVHIRRLRAKVG--PEYEGHIQTVRSV 229 Query: 62 GYRFCGD 68 GYRF + Sbjct: 230 GYRFQAE 236 >UniRef50_C6LD48 DNA-binding response regulator ResD n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LD48_9FIRM Length = 238 Score = 97.5 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ +R +LL + G + RT+DV I+RIR+ + + T+ G Sbjct: 170 LYFLASSPNQVFTREQLLDHIWGYDYIGDARTIDVHIKRIREKIKDH--ETWSLDTVWGV 227 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 228 GYKFRTAEE 236 >UniRef50_D1CH01 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CH01_THET1 Length = 238 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ +++++ G + + V IRR+R P+ P I T G Sbjct: 163 LELLVRHAGQVLPHDLIMERVWGPTYVGDHQLLKVFIRRLRHKLGDDPEQPRYIQTEWGM 222 Query: 62 GYRFCGD 68 GYRF G Sbjct: 223 GYRFVGQ 229 >UniRef50_C7ILM1 Two component transcriptional regulator, winged helix family n=3 Tax=Firmicutes RepID=C7ILM1_9CLOT Length = 232 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 40/68 (58%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P KI +R ELL+ + G + R+VD+TI R+RK E +TP+ + TI+G Sbjct: 163 ILETLFKRPKKIFTRDELLEIVWGYDYSGDSRSVDMTIMRLRKKIEEDSETPKYVKTIYG 222 Query: 61 EGYRFCGD 68 GY+ GD Sbjct: 223 FGYQLGGD 230 >UniRef50_A9BR19 Two component transcriptional regulator, winged helix family n=30 Tax=cellular organisms RepID=A9BR19_DELAS Length = 252 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 41/69 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E G++ +R ++++ + GREL+ DR++DV + RIR E+ P P+ I T+ G Sbjct: 184 LVTLAERAGRVLTRDQIMEAVRGRELEAFDRSIDVHMGRIRAAIEADPKAPKRILTVRGV 243 Query: 62 GYRFCGDLE 70 GY F + Sbjct: 244 GYVFAKQQD 252 >UniRef50_B2A0K7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B2A0K7_NATTJ Length = 246 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G++ +R +LL+K+ G + RTVDV IR +R+ P+++ T+ G Sbjct: 179 LNIMVTNSGQVLTREKLLEKIWGYDFLGDTRTVDVHIRHLRQKISEAGGPPDLVETVRGI 238 Query: 62 GYRF 65 GYR Sbjct: 239 GYRL 242 >UniRef50_C7M2G6 Putative two component transcriptional regulator, winged helix family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2G6_ACIFD Length = 217 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ SR LL ++ G E RTVDV +RR+R +I T+ Sbjct: 153 LKFLASHPGKVFSRETLLSRVWGYEYYGGARTVDVHVRRLRAKLGEA--HEHLIHTVRSV 210 Query: 62 GYRF 65 GYRF Sbjct: 211 GYRF 214 >UniRef50_B2V3E9 Transcriptional regulatory protein ResD n=5 Tax=Clostridiales RepID=B2V3E9_CLOBA Length = 233 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ SR E+L K+ G + R VD I+RIRK + I T++G Sbjct: 166 ILYLLATNEGRVLSREEILDKVWGYDYFGDTRVVDTQIKRIRKKIPEEGEKWS-IKTVYG 224 Query: 61 EGYRFC 66 GY+F Sbjct: 225 IGYKFE 230 >UniRef50_A6LVN5 Two component transcriptional regulator, winged helix family n=3 Tax=Firmicutes RepID=A6LVN5_CLOB8 Length = 228 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + S ++ +K+ G D TV V IR+IR+ E P+ P I T+ G Sbjct: 164 ILELLASNKGIVFSIEKIYEKIWGDVFFESDNTVMVHIRKIREKIEEEPENPRYIRTVWG 223 Query: 61 EGYR 64 GYR Sbjct: 224 VGYR 227 >UniRef50_Q01RV3 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q01RV3_SOLUE Length = 235 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NP + +R +L + G E P+ RTVD + ++R+ E P+TP+ T+HG Sbjct: 170 LTYFLHNPDRPLTRDMILNSVWGYEFFPNTRTVDAHVVKLRQKLEPDPNTPKHFLTVHGV 229 Query: 62 GYRFCG 67 GYRF Sbjct: 230 GYRFIP 235 >UniRef50_B0MNE2 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0MNE2_9FIRM Length = 232 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 33/61 (54%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 N ++ SR ELL K+ G + RT+D+ I +RK + +I T+ G GYRF G Sbjct: 172 NRARVVSREELLTKVWGIDFVGETRTLDMHIGTLRKKLSDDAENAHLIKTVRGVGYRFIG 231 Query: 68 D 68 + Sbjct: 232 E 232 >UniRef50_Q01T10 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01T10_SOLUE Length = 237 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG + SR +LL + G++ DR VDV + R+R+ E P +P +I ++ G Sbjct: 165 LEFLMNRPGVVFSREQLLNAVWGQDRAITDRAVDVYVLRLRQKVEKDPASPILIHSVRGF 224 Query: 62 GYRFCG 67 GY F Sbjct: 225 GYTFEP 230 >UniRef50_Q2JED0 Two component transcriptional regulator, winged helix family n=72 Tax=Bacteria RepID=Q2JED0_FRASC Length = 321 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+ +R ELL+ + G TV V IRR+R+ E P P ++ T+ G Sbjct: 216 LAFLLRRPGRAFTRGELLEHVWGWSY-GDPSTVTVHIRRLREKIEDDPTAPRMLVTVWGV 274 Query: 62 GYRFCG 67 GYR+ Sbjct: 275 GYRYDP 280 >UniRef50_Q0AWC5 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWC5_SYNWW Length = 227 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (56%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ENPG++ SR +L+++ G + ++RT+D I +R E+T + I T++G Sbjct: 159 ILLLLAENPGQVFSRLHILERVFGDIYEGYERTIDTHISNLRHKIEATGKSEISIKTVYG 218 Query: 61 EGYRFCGDL 69 GY+ + Sbjct: 219 IGYKLVAEE 227 >UniRef50_C5CFK4 Two component transcriptional regulator, winged helix family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CFK4_KOSOT Length = 226 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENPGK+ +R E+L ++ G + RTVDV I ++R+ E I T+ G Sbjct: 160 LKLMIENPGKVFNRQEILDRVWGMDFFGDFRTVDVHISKLREKIG-----SEFIKTVRGV 214 Query: 62 GYRFCGDLED 71 GY+ ++ Sbjct: 215 GYKLVIPEDE 224 >UniRef50_C0W5Y5 Response regulator n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W5Y5_9ACTO Length = 223 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R LL ++ G + RTVDV +RR+R + +I T+ Sbjct: 157 LKYLAANQGRVLTRETLLDEVWGEDYIGGSRTVDVHVRRLRAKLG--TEHDHLIGTVRNV 214 Query: 62 GYRFCGDLE 70 GYR +E Sbjct: 215 GYRLDALVE 223 >UniRef50_Q67J79 Two-component response regulator, CheY-like n=1 Tax=Symbiobacterium thermophilum RepID=Q67J79_SYMTH Length = 232 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR +LL ++ G + + RTVD I+ +R +I T+ G Sbjct: 164 LALLAAHPGQVFSREKLLDRIWGPDFQGDARTVDAHIKNLRDKLGEGAG---LILTVWGV 220 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 221 GYRFAEVPD 229 >UniRef50_A8MLN3 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiaceae RepID=A8MLN3_ALKOO Length = 231 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F ENPG++ ++ +L + + D + V I ++RK E +P+ I T+ G G Sbjct: 168 KFFMENPGQVFTKEQLYENIWN-NSIIDDNAIMVYIHQLRKKLEDNVKSPKHIVTVWGIG 226 Query: 63 YRFCG 67 Y+F Sbjct: 227 YKFIA 231 >UniRef50_A8MFP9 Two component transcriptional regulator, winged helix family n=16 Tax=Bacteria RepID=A8MFP9_ALKOO Length = 231 Score = 96.3 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+P K+ ++A L +++ E D TV+V I +R E I T+ G Sbjct: 165 ILELLMEHPKKVFTKANLFEQVWNDEFLGDDNTVNVHISNLRSKLAKADPATEYIHTVWG 224 Query: 61 EGYRFC 66 G++ Sbjct: 225 IGFKMN 230 >UniRef50_C8PCG6 DNA-binding response regulator n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PCG6_9LACO Length = 238 Score = 96.3 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN + SR +LL + + R VD+ I +R E+ P P++I T+ G Sbjct: 169 LKFLFENQNHVLSREQLLDGVWEYEDEYNTTRIVDMHISNLRDKIEADPANPQLIKTVRG 228 Query: 61 EGYRF 65 GY Sbjct: 229 LGYML 233 >UniRef50_A6LQJ3 Two component transcriptional regulator, winged helix family n=4 Tax=Clostridium RepID=A6LQJ3_CLOB8 Length = 231 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 28/66 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK+ ++ ++ +++ + V + IR+ E P P I TI G Sbjct: 159 ILKLLVSNLGKVFTKKQIYEEVWEEAYFGDSNNIMVHLSHIREKIEDDPKNPIYIKTIRG 218 Query: 61 EGYRFC 66 GY+ Sbjct: 219 IGYKIE 224 >UniRef50_C7N7D7 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=17 Tax=Bacteria RepID=C7N7D7_SLAHD Length = 232 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFEST-PDTPEIIATIHG 60 + ENPG+ +R++LLK + RTVD I+ +R+ P I TI G Sbjct: 164 LRKLMENPGRAFTRSQLLKDVWDVSFVGETRTVDTHIQTLRRKLNDAYPGAGNAIETIRG 223 Query: 61 EGYRFCGD 68 GYRF + Sbjct: 224 VGYRFSKE 231 >UniRef50_B0MRC9 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRC9_9FIRM Length = 222 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ EN G+I ++ L ++ G + +T+ V I+R+R+ E P P+ I T+ G Sbjct: 156 LVLLIENKGRILTKEYLFNQIWGSDSFSEQQTLTVHIKRLRQKIEDDPKNPKHIQTVWGV 215 Query: 62 GYRFCG 67 GY++ Sbjct: 216 GYKYES 221 >UniRef50_A4X1M5 Two component transcriptional regulator, winged helix family n=2 Tax=Salinispora RepID=A4X1M5_SALTO Length = 251 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + + SR +LL + T+ V I+R+RK E+ + +I T+ G Sbjct: 174 LYFFMTHADRTVSREQLLSAVWDGSTGESSNTLTVHIKRLRKRLEAEGEPQPLIITVRGL 233 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 234 GYRFTPPEQ 242 >UniRef50_Q3A924 DNA-binding response regulator n=3 Tax=Bacteria RepID=Q3A924_CARHZ Length = 236 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NPGK SR ELL+ G + ++RT+D I +RK E P PE I T+ G Sbjct: 162 LEAFLKNPGKAYSRLELLEYAIGEAYEGYERTIDTHISNLRKKIEKDPANPEYIQTVFGI 221 Query: 62 GYRFCGDLE 70 GY+ E Sbjct: 222 GYKLKPRGE 230 >UniRef50_C0GHG5 Two component transcriptional regulator, winged helix family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHG5_9FIRM Length = 237 Score = 96.0 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L N G+ R +LL+++ G E RT+D I+R+R+ + T+ G Sbjct: 167 LLILARNAGRTLKREQLLEQVWGYEYPGSTRTIDEHIKRLRQKISQLEPGYTFVQTVWGV 226 Query: 62 GYRFCGDLED 71 GY+ D Sbjct: 227 GYKLEVKEND 236 >UniRef50_UPI0001C421AD two-component response regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C421AD Length = 246 Score = 96.0 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E PG++ S+ +L ++ ++ RTV V I+ +R+ P I T+ G Sbjct: 175 LLTLAEAPGQVFSKEQLYNRVWKQDDADDIRTVTVHIKNVRRKLGDGSKHPRFIDTVWGI 234 Query: 62 GYRFCGDLED 71 GY+F G + Sbjct: 235 GYKFIGQKHE 244 >UniRef50_Q897D5 Two-component response regulator n=8 Tax=Clostridiales RepID=Q897D5_CLOTE Length = 233 Score = 96.0 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + S ++ +++ E D TV V IR++R+ E P P+ + T+ G Sbjct: 166 ILELLARNKGIVFSIEKIYERVWKEEFFKSDNTVMVHIRKLREKIEENPRKPKYVKTVWG 225 Query: 61 EGYR 64 GY+ Sbjct: 226 VGYK 229 >UniRef50_Q067N9 Two component transcriptional regulator, winged helix family protein n=1 Tax=Synechococcus sp. BL107 RepID=Q067N9_9SYNE Length = 234 Score = 96.0 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 40/65 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ SR +L+ ++ G + +TVDV IR +R+ E+ P P ++T+ G Sbjct: 170 LELFIQNPKRVWSRDDLIDQIWGVDYIGDRKTVDVHIRWLREKIEANPSDPTKLSTVRGF 229 Query: 62 GYRFC 66 GYRFC Sbjct: 230 GYRFC 234 >UniRef50_C2EBW1 Two-component response regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EBW1_9LACO Length = 247 Score = 96.0 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G++ SR +LL+ + G ++ R VD+ I +R E+ P+TP I T G Sbjct: 176 LDYLAKHCGQVLSREQLLQGVWGYDILGTSRIVDIHISHLRDKLEADPNTPLWIKTNRGF 235 Query: 62 GYRFCGDLE 70 GY F G ++ Sbjct: 236 GYSFSGKIK 244 >UniRef50_C7MNN6 Response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MNN6_CRYCD Length = 236 Score = 95.6 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ SR LL+++ G + RTVDV +RR+R + T+ G Sbjct: 173 LAFLAAHPGRTFSRDALLQRVWGFDYYGGSRTVDVHVRRVRSKLGPDLAH--HLETVRGV 230 Query: 62 GYRF 65 GY + Sbjct: 231 GYLW 234 >UniRef50_B0S1J7 Two-component response regulator n=16 Tax=Clostridia RepID=B0S1J7_FINM2 Length = 239 Score = 95.6 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP KI +R E+++ G + + DR +D I+ IR E P P I TI+G Sbjct: 169 IIKTLFSNPNKIFTRDEIIELSFGYDYEAFDRAIDTHIKNIRHKIEDNPKKPRYIKTIYG 228 Query: 61 EGYRF 65 GY+ Sbjct: 229 VGYKL 233 >UniRef50_A6BHI5 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHI5_9FIRM Length = 140 Score = 95.6 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 32/68 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG+I S+ ++ ++ + V IRRIRK E P I + G Sbjct: 70 ILYLLAKNPGRIFSKEQIYTQVWKEPYYGAEDNVMGIIRRIRKKIEPDSAKPRYILNVWG 129 Query: 61 EGYRFCGD 68 GY+F G+ Sbjct: 130 MGYKFNGE 137 >UniRef50_A7HL55 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=A7HL55_FERNB Length = 229 Score = 95.6 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +N ++ S+ E+L + G + D TV+V + IRK +PE+I TI G Sbjct: 162 LLYLAKNKDRVVSKEEILDAVWGIDYYGSDNTVEVYVNYIRKKL-----SPELIKTIRGV 216 Query: 62 GYRFCGD 68 GY+ G+ Sbjct: 217 GYKLVGE 223 >UniRef50_B0TDB2 Two-component response regulator n=3 Tax=Bacteria RepID=B0TDB2_HELMI Length = 235 Score = 95.6 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P ++ + EL ++ G + RTV I IRK ++ P PE I I G Sbjct: 170 LFFLAQHPNQVFTAQELYTRIWGYKDIGDYRTVMTHISNIRKKIKTDPSAPERIQNIRGF 229 Query: 62 GYRFC 66 GY+F Sbjct: 230 GYKFN 234 >UniRef50_A1SN97 Response regulator receiver n=41 Tax=Bacteria RepID=A1SN97_NOCSJ Length = 297 Score = 95.6 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E P + SR +L+ ++ G + + VDV I +R+ + + + T+ G Sbjct: 229 LATLAERPRLVFSRRQLIDRVWGEDWVGDEHLVDVHIGHLRRKLDDDASRGQYLRTVRGV 288 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 289 GYRMGTGEE 297 >UniRef50_B0NH75 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NH75_EUBSP Length = 227 Score = 95.6 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +N ++ S+ L + + + D T+ V + R+RK E P+ I T+ G Sbjct: 162 IIRLFMDNVNRVFSKDALYEMVWDND-IVDDSTIVVYMNRLRKKLEEDFSNPKYILTVRG 220 Query: 61 EGYRFCG 67 GYRF Sbjct: 221 LGYRFVA 227 >UniRef50_A7WWQ5 Transcriptional regulatory protein walR n=685 Tax=Bacteria RepID=WALR_STAA1 Length = 233 Score = 95.6 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 35/63 (55%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + ++ G++ +R LL+ + G + RTVDVTIRR+R+ E P PE I T G G Sbjct: 167 HYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVG 226 Query: 63 YRF 65 Y Sbjct: 227 YFL 229 >UniRef50_C7I0W4 Two component transcriptional regulator, winged helix family n=4 Tax=Proteobacteria RepID=C7I0W4_THIIN Length = 365 Score = 95.6 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +L+ + G E DR++DV + R+R+ E P P + TI G+ Sbjct: 295 LQAMVAHPNRVLSRDQLIDWLKGYERDAFDRSIDVRVARLRRKIEDDPARPVYVRTIRGQ 354 Query: 62 GYRFCG 67 GY F Sbjct: 355 GYLFNP 360 >UniRef50_A6X2C4 Two component transcriptional regulator, winged helix family n=59 Tax=cellular organisms RepID=A6X2C4_OCHA4 Length = 255 Score = 95.6 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G++ +R LL+ + P +DV I R+R E D P ++ T+ G Sbjct: 179 LEYLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIEKGFDGP-LLHTVRGA 237 Query: 62 GYRFCG 67 GY Sbjct: 238 GYMLKA 243 >UniRef50_B6FPY5 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPY5_9CLOT Length = 114 Score = 95.2 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ + ++ + + G+E + V I IRK E P P I T+ G Sbjct: 46 ILFFLASYPGQVFTHRQIYETVWGKEYFCDEGNVTAHIGHIRKKIELDPRNPVFIQTVRG 105 Query: 61 EGYRFC 66 GY+F Sbjct: 106 IGYKFA 111 >UniRef50_C7N0N0 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=42 Tax=Bacteria RepID=C7N0N0_SLAHD Length = 240 Score = 95.2 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ SR EL++K+ G + + ++RT+D ++ +R P P+ + T+HG Sbjct: 168 LTTLSRYPGRVYSRMELVEKVLGYDFEGYERTIDSHVKNLRAKIGDNPRNPKWLHTVHGV 227 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 228 GYRFEDPTK 236 >UniRef50_D1CA41 Two component transcriptional regulator, winged helix family n=3 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CA41_SPHTD Length = 310 Score = 95.2 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H ++ G SR L+++ G + VDV IRR+R+ E P +P + T+ G Sbjct: 163 ILAHLMQSSGTPVSRKRLIERTWGVDFLHESNRVDVYIRRLREKIEPEPSSPIYVRTVRG 222 Query: 61 EGYRFCGDLE 70 GY FC + Sbjct: 223 VGYVFCPPEK 232 >UniRef50_B5JD22 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JD22_9BACT Length = 239 Score = 95.2 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R ++L+ + G + P VDV ++R+RK +I T+ G Sbjct: 174 LEYLMRSPGRVLTRTQILEHVWGYDFDPSTNVVDVCVQRLRKKV-DAGHDVHLIETVRGA 232 Query: 62 GYRFCGD 68 GYR + Sbjct: 233 GYRMRKE 239 >UniRef50_UPI00017890B9 putative two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017890B9 Length = 272 Score = 95.2 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ ++ G + +R +L+ K+ + VDV I+ +RK P IAT+ G Sbjct: 207 LMLLLDSEGAVCTREDLMCKIWDTDFMGGSNVVDVHIKSLRKKLNDNAGAPRYIATVRGV 266 Query: 62 GYRFC 66 GYR Sbjct: 267 GYRLA 271 >UniRef50_A6LXP4 Two component transcriptional regulator, winged helix family n=5 Tax=Clostridiales RepID=A6LXP4_CLOB8 Length = 227 Score = 95.2 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK+ +R ++++ G E DR++DV I+ +RK E +P+ I T+ Sbjct: 159 ILYILASNQGKVFTREAIIERAFGMEFDGSDRSIDVHIKNLRKKIEEDTKSPQYIVTVTK 218 Query: 61 EGYRF 65 GY+F Sbjct: 219 IGYKF 223 >UniRef50_A9KHT5 Two component transcriptional regulator, winged helix family n=12 Tax=Bacteria RepID=A9KHT5_CLOPH Length = 233 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 NP K+ +R LL + G + RTVD I+R+R + I TI G G Sbjct: 164 WTLASNPNKVFTRDNLLDSLWGFDYFGDSRTVDSHIKRLRAKLDMLEHPNWSIKTIWGVG 223 Query: 63 YRFCGDLE 70 Y+F D + Sbjct: 224 YKFEVDED 231 >UniRef50_A5V0J0 Two component transcriptional regulator, winged helix family n=7 Tax=Chloroflexaceae RepID=A5V0J0_ROSS1 Length = 229 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G++ S +++L K+ G + + V V IRR+R E D P I T+ Sbjct: 161 LYYLMQNTGRVLSASQILSKVWGYDYEGESNLVAVYIRRLRAKIEPDIDAPRYIITVRNL 220 Query: 62 GYRFCGDLE 70 GY+F Sbjct: 221 GYKFVVQDR 229 >UniRef50_UPI0001C379A1 regulatory protein VanR n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C379A1 Length = 239 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 32/68 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ENP K+ S+A L + + G D TV V + IR+ + E I T+ G Sbjct: 163 ILQLMLENPTKLWSKANLFESVWGENYLSDDNTVKVHMSNIRQKLKKLDPDTEYIETVWG 222 Query: 61 EGYRFCGD 68 GYR GD Sbjct: 223 MGYRLVGD 230 >UniRef50_C0D765 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D765_9CLOT Length = 260 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +F N KI ++ ++ + + + D T+ V IRR+R E +P P + I G G Sbjct: 186 KYFLSNQNKILTKDQIYRYVWNDDF-VDDNTIMVHIRRLRMKIEDSPGHPVYLKNIRGMG 244 Query: 63 YRFCGDL 69 Y+F + Sbjct: 245 YQFVAEE 251 >UniRef50_Q5SMC3 Response regulator n=4 Tax=Deinococci RepID=Q5SMC3_THET8 Length = 223 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 41/67 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + PG++ +R ELL+++ G E + +R VD +R +RK P+ P I T+ G Sbjct: 157 LLVFAQAPGRVFTRGELLERVWGPEFEGSERVVDAYVRLLRKKLRDDPEAPRFIETVVGL 216 Query: 62 GYRFCGD 68 GYRF GD Sbjct: 217 GYRFLGD 223 >UniRef50_A9VV65 Two component transcriptional regulator, winged helix family n=24 Tax=Bacillus RepID=A9VV65_BACWK Length = 236 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++P ++ SR++LL+ + + TV V + R+R+ E I T+ G Sbjct: 164 VLYVMAKHPKQVFSRSQLLELIWDFGHEGASNTVTVLVSRLREKLEKHTIKNHWIHTVWG 223 Query: 61 EGYRFCGDLED 71 GYRF + + Sbjct: 224 IGYRFEPNGRN 234 >UniRef50_C6C1C7 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfovibrio RepID=C6C1C7_DESAD Length = 232 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NPG+ +R +L+ + G++ DR++DV I ++R F+ PD I T+ G Sbjct: 166 LKALMDNPGRPMTRDDLMTSVWGKDFNAFDRSIDVHISKLRALFKPYPDHESRIKTVWGT 225 Query: 62 GYRFCGD 68 GY F + Sbjct: 226 GYMFVSE 232 >UniRef50_C6D6P8 Two component transcriptional regulator, winged helix family n=17 Tax=Firmicutes RepID=C6D6P8_PAESJ Length = 238 Score = 95.2 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHD-RTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P K+ S + +++ G TV V IR +RK + I T+ Sbjct: 171 ILYLLASHPKKVFSAEHIFQQVWGEAYYESGGNTVMVHIRTLRKKLGEDKQHQQWIKTVW 230 Query: 60 GEGYRFCG 67 G GY F G Sbjct: 231 GVGYAFQG 238 >UniRef50_B9YDA4 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDA4_9FIRM Length = 235 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G+ +EL + G+ RTV V I +RK E P P+++ ++ G Sbjct: 163 ILAFLMQHAGQCYKASELYNHIWGKSSYGDHRTVVVHIHNLRKKIEQDPAEPQLLQSVWG 222 Query: 61 EGYRFCGD 68 +GY F + Sbjct: 223 KGYCFIDE 230 >UniRef50_B0N9X7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0N9X7_EUBSP Length = 152 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G I S+ ++ + E D + IRR+RK E P PE I T+ G Sbjct: 82 ILYVLALHQGSILSKEQIYNFVWNGEYLWDDSNITSHIRRLRKKIEDDPSRPEYIQTVRG 141 Query: 61 EGYRFC 66 GYR Sbjct: 142 VGYRMN 147 >UniRef50_Q24Q12 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24Q12_DESHY Length = 168 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ +R +L + G + T+ V IR++R+ E P PE I T+ G Sbjct: 103 LSFMANHPGQVFTRQQLFDNLWGEKYLGDSGTITVFIRKVREKVELDPGRPEYILTVWGV 162 Query: 62 GYRFCG 67 GY+F G Sbjct: 163 GYKFAG 168 >UniRef50_UPI0001C425A1 two component transcriptional regulator, winged helix family protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C425A1 Length = 233 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P ++ +R +LL ++ G + RT+DV I+RIR+ I TI G Sbjct: 165 LYYLASYPNQVFTRQQLLDQIWGYAFEGDPRTIDVHIKRIREKLTEADAKWT-IKTIRGV 223 Query: 62 GYRFCGDLED 71 GY+F + Sbjct: 224 GYKFLEKEHE 233 >UniRef50_Q1J251 Two component transcriptional regulator PhoB n=5 Tax=Deinococci RepID=Q1J251_DEIGD Length = 229 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ +R ELL ++ G + +RTVD + ++R H P P + T+ G+ Sbjct: 159 LAFLTQNAGRVYTRTELLDRVWGADFLGGERTVDQHVTQLRAHLGDDPARPRFLETVRGK 218 Query: 62 GYRFCG-DLED 71 GYR + E+ Sbjct: 219 GYRMRPWEGEN 229 >UniRef50_C6D5Y8 Putative two component transcriptional regulator, winged helix family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5Y8_PAESJ Length = 255 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + G + +R + + G + VDV I+ +R+ + + P IAT+ G Sbjct: 186 LLMFLTSDGAVLTREAMFDAVWGSQYFGGSNVVDVHIKTLRRKLKDSAVAPHYIATVRGV 245 Query: 62 GYRFCGD 68 GYR + Sbjct: 246 GYRLVEE 252 >UniRef50_C7TA80 Two-component response regulator n=2 Tax=Lactobacillus rhamnosus GG RepID=C7TA80_LACRG Length = 218 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG + S+ + +K+ G + TV+V I+R+R + I T+ G Sbjct: 152 LKLLMIHPGHVFSKQAIYEKVWGESYIGDENTVNVCIKRLRDKIQDV--NQRYIRTVWGI 209 Query: 62 GYRFCGDLE 70 GY +E Sbjct: 210 GYVLEAGVE 218 >UniRef50_C0CI50 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CI50_9FIRM Length = 224 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +N G++ +R ++L+ + E +RT++V +RR+R+ E P P I T+ G Sbjct: 157 LEYFLKNRGQVLTREQILENVWDSYENFVDERTLNVNVRRLREKIEKDPKNPRYIVTMFG 216 Query: 61 EGYRF 65 GY++ Sbjct: 217 IGYKW 221 >UniRef50_D1C280 Two component transcriptional regulator, winged helix family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C280_SPHTD Length = 240 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG++ SR LL ++ G + DRTVD I R+RK E I T+ G Sbjct: 169 LHLLAANPGRVFSRDYLLHRVWGEDYVGVDRTVDTHILRLRKKLGGPGSPAERIVTLWGV 228 Query: 62 GYRFCGDLE 70 GY++ + Sbjct: 229 GYKYERPRD 237 >UniRef50_A5WBW4 Two component transcriptional regulator, winged helix family n=20 Tax=Gammaproteobacteria RepID=A5WBW4_PSYWF Length = 238 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+I SR ++ +++ G E DR++DV I RIR P+ P+ I T+ + Sbjct: 170 LWLLASNAGRILSREDIFERLRGIEYDGQDRSIDVRISRIRPKIGDDPENPKRIKTVRSK 229 Query: 62 GYRFCGD 68 GY F + Sbjct: 230 GYLFVKE 236 >UniRef50_C7N7W6 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N7W6_SLAHD Length = 224 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+I SR LL ++ G + RTVDV +RR+R P+ + I T+ G Sbjct: 161 LSFLATHPGRIYSREVLLSQVWGFDYYGGSRTVDVHVRRLRAKLG--PEVAQHIETVRGA 218 Query: 62 GYRFC 66 GY + Sbjct: 219 GYLWN 223 >UniRef50_A8SR47 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SR47_9FIRM Length = 239 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 35/64 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ EN G++ ++ +++ + G TV V +R +R+ E+ P P++I T+ G Sbjct: 172 LVYMAENRGRVLTKEQIMSAVWGLYSDVEPSTVAVHVRWLREKLETDPSHPQLIRTVWGT 231 Query: 62 GYRF 65 GY Sbjct: 232 GYVL 235 >UniRef50_C4G2P7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2P7_ABIDE Length = 257 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG++ S ++ ++ + + TV V IRR+R+ E +II T+ G Sbjct: 191 ILCLLASNPGRVFSTDDIFTRVWNEKAFEGNNTVMVHIRRLREKIEMDARNAKIIKTVWG 250 Query: 61 EGYRFCG 67 GY+ Sbjct: 251 VGYKIEK 257 >UniRef50_D1PMF3 DNA-binding response regulator RegX3 n=3 Tax=Clostridiales RepID=D1PMF3_9FIRM Length = 239 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 36/70 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G I + L + + G++ ++ +++V IR +R+ E TP P + T+ G Sbjct: 169 ILQKLGENRGHIITYDALCEAVWGQDYYGYENSLNVHIRHLREKLEETPGKPRWLLTVRG 228 Query: 61 EGYRFCGDLE 70 GY+ G+ Sbjct: 229 IGYKLAGEAR 238 >UniRef50_Q3Z7F8 Transcriptional regulator n=5 Tax=Dehalococcoides RepID=Q3Z7F8_DEHE1 Length = 223 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ SR LL K+ G + DRTVDV I R+R E T + T+ Sbjct: 158 LKFLAQNRGRVFSREALLNKVWGYDYYGGDRTVDVHITRLRGKIED--QTHTFVETVRNI 215 Query: 62 GYRF 65 GYRF Sbjct: 216 GYRF 219 >UniRef50_B1XM84 Two-component response regulator n=8 Tax=Cyanobacteria RepID=B1XM84_SYNP2 Length = 241 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ +R ++L+ + G E + ++V IR +R E+ +I T+ G Sbjct: 175 LKYLMSHPQQVLTREQILENVWGNEFQGESNVIEVYIRYLRLKIEAKGQK-RLIQTVRGV 233 Query: 62 GYRFCGDL 69 GY D Sbjct: 234 GYVLKKDP 241 >UniRef50_Q1K367 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K367_DESAC Length = 233 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 32/64 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + + SR ++ + + G E DR+VD+ I R+R P P+++ T+ G Sbjct: 168 LWYLARHARTVLSRDQIYEALFGLEYNGVDRSVDIYISRLRNKLGEDPSRPQLLKTVRGV 227 Query: 62 GYRF 65 GY Sbjct: 228 GYLL 231 >UniRef50_Q02A31 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q02A31_SOLUE Length = 231 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G+ +R +LL ++ G RTVDV + +R+ E P P + T+ G Sbjct: 163 LGYLIDHCGETVTREDLLTQVWGYSATTDTRTVDVHVAWLRQKLEENPKYPRYLQTVRGL 222 Query: 62 GYRFCGDL 69 GY+ + Sbjct: 223 GYKLSDEE 230 >UniRef50_B6FYV2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYV2_9CLOT Length = 232 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 31/57 (54%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 N GK+ SR LL ++ G E RTVDV IR +RK E + I TI G GY+ Sbjct: 174 NRGKVLSRNFLLDEIWGYEYYGETRTVDVHIRYLRKKLEEAGADEKYIETIRGVGYK 230 >UniRef50_C2EDI8 Response regulator n=11 Tax=Firmicutes RepID=C2EDI8_9LACO Length = 243 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + ++PGKI S + + + TV V IR++R E P P+ I T+ Sbjct: 172 ILRLMMQHPGKIFSTQNIYESVWREPYFYTCGNTVMVHIRKLRTKIEPDPQKPQYIKTVW 231 Query: 60 GEGYRFC 66 G+GYRF Sbjct: 232 GKGYRFE 238 >UniRef50_C4IAX3 DNA-binding response regulator n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAX3_CLOBU Length = 234 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG++ S+A+L + + G D T+ V I +R+ E P P+ I T+ G Sbjct: 166 ILAKLMKYPGRVYSKAQLYESINGEYCDSDDSTMMVHISNLREKIEEDPKNPKYIKTVRG 225 Query: 61 EGYRFC 66 GY+ Sbjct: 226 IGYKIE 231 >UniRef50_A7ICZ4 Two component transcriptional regulator, winged helix family n=2 Tax=Alphaproteobacteria RepID=A7ICZ4_XANP2 Length = 255 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ +R LL R+ +P DR++DV + R+RK E+ P P+ I T+ G Sbjct: 185 LRVFLQNPNRVLTRDRLLDLAHDRDNEPFDRSIDVRVTRLRKKIEADPAKPQAIKTVRGV 244 Query: 62 GYRFCG 67 GY F Sbjct: 245 GYLFVP 250 >UniRef50_B1YFK7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillales RepID=B1YFK7_EXIS2 Length = 230 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 38/67 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + HF +N ++ SR ELL + G +TVDV IRR+R+ E P P+ I T+ G Sbjct: 163 LCHFIKNEDQVMSRDELLDAVWGENYFGDRKTVDVNIRRLRQKIEENPAEPQFIETLWGH 222 Query: 62 GYRFCGD 68 GY++ + Sbjct: 223 GYKWRNE 229 >UniRef50_C5D2L7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillaceae RepID=C5D2L7_GEOSW Length = 225 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++ G++ SR +LL ++ G + + RTVD I+ +R + + I T+ G Sbjct: 162 LLFLAKHHGQVFSREDLLAQVWGYDYTGNARTVDTHIKTLRMKLKQAS---DFIQTVWGI 218 Query: 62 GYRFC 66 GY+F Sbjct: 219 GYKFE 223 >UniRef50_A7HMZ4 Two component transcriptional regulator, winged helix family n=7 Tax=Thermotogaceae RepID=A7HMZ4_FERNB Length = 229 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P ++ SR E+L+ + E DR VDV I +RK I T+ G Sbjct: 156 ILKLLAQRPDRVYSREEILETIWTDEYDVFDRVVDVHINSLRKKLGKD-----WIITVRG 210 Query: 61 EGYRFCGDLE 70 GY+F + Sbjct: 211 VGYKFSKKGD 220 >UniRef50_A9BP99 Two component transcriptional regulator, winged helix family n=60 Tax=Proteobacteria RepID=A9BP99_DELAS Length = 262 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ +I +R LL+ + P +DV I R+R P +I T+ G Sbjct: 189 LAFLMQHAHQIVTRTMLLESVWDYRFDPQTNVIDVHISRLRGKV-DKGFEPALIHTVRGV 247 Query: 62 GYRFCGDLED 71 GY +D Sbjct: 248 GYSLSDRPQD 257 >UniRef50_Q38YC7 Two-component system, response regulator (Possibly involved in phosphate regulation) n=12 Tax=Lactobacillales RepID=Q38YC7_LACSS Length = 237 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F K+QSR +LL + G + R VD+ + +R+ E P P + T+ G Sbjct: 166 LVYFMHRLNKVQSREKLLNAVWGFDYPAETRMVDIQVSHLREKIEDNPRHPVYLKTVRGF 225 Query: 62 GYRFCGDLED 71 GY+ D Sbjct: 226 GYQLEDPAHD 235 >UniRef50_B2TJI4 Regulatory protein VanR n=4 Tax=Clostridiales RepID=B2TJI4_CLOBB Length = 226 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N ++ S+A L + + E D+T+ I +R + + E I T+ G Sbjct: 159 ILELLMKNKNRVFSKANLYEFIWESEYLGDDKTIKTHISNLRSKLKEVNENEEYIETVWG 218 Query: 61 EGYRFCG 67 GYR Sbjct: 219 MGYRLSK 225 >UniRef50_C1YUF6 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YUF6_NOCDA Length = 243 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M + G++ SR EL ++ + L P + T+ V IRR+R + P I T+ G Sbjct: 173 IMDFLLRHSGRVVSREELWTEVWHKPLPPVNNTIAVHIRRLRHKLGDSEAQPRFIHTVRG 232 Query: 61 EGYRFCG 67 GYR Sbjct: 233 IGYRLDT 239 >UniRef50_Q0RNB1 Putative response regulator (Response regulator protein) (Partial match) n=1 Tax=Frankia alni ACN14a RepID=Q0RNB1_FRAAA Length = 309 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ +R +LL+++ G R +DV +RR+R+ E+ P P I T+ G Sbjct: 184 LCELAVAGGRAVTRKQLLERIWGYNYFGGARMLDVHVRRLRRKVEADPSAPTHILTVRGI 243 Query: 62 GYR 64 GYR Sbjct: 244 GYR 246 >UniRef50_Q12T20 Two component transcriptional regulator, winged helix family n=11 Tax=Gammaproteobacteria RepID=Q12T20_SHEDO Length = 225 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+P K+ SR L + + P +DV I ++R+ FE PE+I T+ G Sbjct: 159 LKYLMEHPNKVISRTLLFEAVWDYHFDPRTNVIDVHIAKLRRKFEEIGF-PEMIETVRGA 217 Query: 62 GYRFCG 67 GYR Sbjct: 218 GYRLSK 223 >UniRef50_Q1J3D6 Two component transcriptional regulator, winged helix family n=4 Tax=Deinococci RepID=Q1J3D6_DEIGD Length = 244 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG +R LL+++ G + +R VDV I +R+ + P I T+ G Sbjct: 169 LFTLAQYPGLAWTRERLLERVWGVDYPRMERVVDVHITGLRRKLGDHAEHPRYIETVRGV 228 Query: 62 GYRFCGDLE 70 GYRF + + Sbjct: 229 GYRFRENGQ 237 >UniRef50_C7T954 Two-component response regulator n=10 Tax=Lactobacillus RepID=C7T954_LACRG Length = 228 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S E+ +++ +E +TV V + +R E D ++I T+ G Sbjct: 162 ILYLLASHPNRVFSADEIFERVWQQESIVSAKTVMVHVSHLRDKIEEATDGEKVIETVWG 221 Query: 61 EGYRFCG 67 GY+ Sbjct: 222 VGYKVEA 228 >UniRef50_Q3AEH2 DNA-binding response regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEH2_CARHZ Length = 226 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP +I ++ +++ ++ V V +RR+R+ E P +P II T+ G Sbjct: 160 LELLFKNPNRIFTKEQIMDRLWPDTFPEDPNIVSVLVRRLREKIEEDPSSPRIIKTVWGV 219 Query: 62 GYR 64 GY+ Sbjct: 220 GYK 222 >UniRef50_Q2SPE2 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=18 Tax=Proteobacteria RepID=Q2SPE2_HAHCH Length = 226 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NPG++ +R LL+K+ P +DV I R+R + +TP ++ TI G Sbjct: 160 LEYFMRNPGQVLTRTMLLEKVWDYHFDPQTNVIDVHISRLRAKIDKDFETP-LLHTIRGA 218 Query: 62 GYRFC 66 GY Sbjct: 219 GYVLR 223 >UniRef50_Q3DDJ6 Phosphate regulon response regulator PhoB n=11 Tax=Bacteria RepID=Q3DDJ6_STRAG Length = 225 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F NP ++ +R ELL K+ G + RTVDV I +R +IAT+ G Sbjct: 160 LVLFFRNPNRVFTRQELLDKVWGEQFLGETRTVDVHIGTLRTKLGEDG---YLIATVRGV 216 Query: 62 GYRFC 66 GYR Sbjct: 217 GYRLE 221 >UniRef50_B1YJZ1 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJZ1_EXIS2 Length = 220 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ENPG++ R +L++++ G + R +D I+ +RK I T+ G Sbjct: 157 ILHLLLENPGRVLEREQLIQQLWGFDAFGDTRFLDTHIKNLRKKI-----NVPYIQTVKG 211 Query: 61 EGYRFCG 67 GY+ Sbjct: 212 VGYKLEA 218 >UniRef50_C7H5J1 Two-component system response regulator (Fragment) n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5J1_9FIRM Length = 119 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +P + EL +K+ G+E RTV V I +R E P P + + G Sbjct: 47 ILTLFIRHPNTFFTANELYRKIWGKESLGDVRTVQVHIHNLRSKIEPDPAKPIYLKNVWG 106 Query: 61 EGYRFCGDLE 70 +GY F + E Sbjct: 107 KGYIFRPEGE 116 >UniRef50_B8IVD0 Two component transcriptional regulator, winged helix family n=10 Tax=Alphaproteobacteria RepID=B8IVD0_METNO Length = 245 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 40/69 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG++ SR L+ GRE DR++D + R+R+ E+ P P++I ++ G Sbjct: 175 LAAMAKHPGRVLSRDMLMDLTRGREWDALDRSIDAQVVRLRRKLEADPKNPKLIKSVRGA 234 Query: 62 GYRFCGDLE 70 GY F G +E Sbjct: 235 GYVFAGRIE 243 >UniRef50_Q5HR28 Response regulator saeR n=60 Tax=Staphylococcus RepID=SAER_STAEQ Length = 229 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ S++ELL+K+ G + TV+V I RIR+ E P I T+ G Sbjct: 162 LWYLASREGEVISKSELLEKVWGYDYYEDANTVNVHIHRIREKLEKHDFLPYTITTVWGL 221 Query: 62 GYRFC 66 GY+F Sbjct: 222 GYKFE 226 >UniRef50_A9WLJ1 Two-component response regulator n=4 Tax=Actinomycetales RepID=A9WLJ1_RENSM Length = 248 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 40/65 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++PG+++SR +LL+ + G E R VD +I+R+R E P P+I+ T+ G Sbjct: 181 LLELLQHPGQVRSREQLLRSVWGAEYLLDSRMVDASIQRLRSKNEDDPSNPQIVVTVRGF 240 Query: 62 GYRFC 66 GYRF Sbjct: 241 GYRFD 245 >UniRef50_C1D266 Putative response regulator, OmpR n=1 Tax=Deinococcus deserti VCD115 RepID=C1D266_DEIDV Length = 700 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 NPG++ +RAE+L ++ E R +D ++++R+ I T+ G GY Sbjct: 157 LLARNPGRLYTRAEILDRVWESEYVGDGRVIDTYVKKLRQKLSVD-----CIETVRGLGY 211 Query: 64 RFCGDL 69 RF D+ Sbjct: 212 RFATDV 217 >UniRef50_A7GIT8 DNA-binding response regulator n=11 Tax=Clostridium RepID=A7GIT8_CLOBL Length = 230 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ +EL +++ G+E +D ++ IR +R+ T + I T+ G Sbjct: 162 ILCLLARNKGRVFPSSELYERVWGQEFLENDNSLLTHIRNLREKLNDTVKNSKYIKTVWG 221 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 222 VGYKIEKE 229 >UniRef50_A5ZNL8 Putative uncharacterized protein n=3 Tax=Ruminococcus RepID=A5ZNL8_9FIRM Length = 137 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ++PG+I + + + V I IR+ E P P I T+ G Sbjct: 66 ILLLLAKSPGRIFGKEMVYDLVWNEPYSGDYNVVMRHICNIREKIEDDPGQPLYIQTVRG 125 Query: 61 EGYRFCGD 68 GYRF G+ Sbjct: 126 VGYRFNGN 133 >UniRef50_B1ZTF2 Two component transcriptional regulator, winged helix family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTF2_OPITP Length = 248 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + G SR L + G P RT+D + R+RK T + P I + G Sbjct: 173 ILDLLARYAGTPVSRERLFDLVWGYTYLPETRTLDTHVWRLRKKIGDTGEEPRWIKNVPG 232 Query: 61 EGYRFC 66 GY+ Sbjct: 233 VGYQLD 238 >UniRef50_A4IPQ9 DNA-binding response regulator n=16 Tax=Bacillales RepID=A4IPQ9_GEOTN Length = 222 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 34/64 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +F + +I ++ +L + + G D+T+ V IR +R+ E P PEII TI G Sbjct: 156 IFQYFLRHLNQILTKEQLYEGVWGEPYIEGDKTLMVHIRYLREKLEKDPKNPEIIETIRG 215 Query: 61 EGYR 64 GYR Sbjct: 216 IGYR 219 >UniRef50_B8CXQ9 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B8CXQ9_HALOH Length = 227 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ NPG++ +R +L KK+ G E K +DRT+D I+ IRK + ++I T++G Sbjct: 162 ILVTLIRNPGQVFTREQLAKKVMGLEYKGYDRTIDAHIKNIRKKL--NLEKNQLIITVYG 219 Query: 61 EGYRFCGD 68 GY+F GD Sbjct: 220 VGYKFEGD 227 >UniRef50_C7NFF7 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=11 Tax=Actinomycetales RepID=C7NFF7_KYTSD Length = 244 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ SR +L+++ + +T+D+ + +RK P IAT+ G Sbjct: 177 LHILVRDMGRVVSREQLMREAWQTDWVGSTKTLDMHVSGLRKKLGDDHSDPRFIATVRGV 236 Query: 62 GYRFCG 67 G+R Sbjct: 237 GFRLVT 242 >UniRef50_C2H8S4 Response regulator n=8 Tax=Enterococcus RepID=C2H8S4_ENTFC Length = 244 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F ENP ++ S+ ++ + + E T+ V I +R E+ P + + TI G G Sbjct: 170 RFFMENPDQVFSKEQIYRSVWNDEHF-DANTIMVFINHLRNKIEADPKNAKYLKTIWGIG 228 Query: 63 YRFCGDLE 70 Y F D + Sbjct: 229 YTFLPDGD 236 >UniRef50_B6WUI4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WUI4_9DELT Length = 254 Score = 93.3 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ SR ELL++ GR P+DR++DV I R+R P++I T+ G+ Sbjct: 168 LEIFLQNPQRVLSRDELLERTQGRNAVPYDRSIDVQISRLRTRLRDNGREPQLIKTVRGD 227 Query: 62 GYRFCGDLE 70 GY D+ Sbjct: 228 GYVLATDVR 236 >UniRef50_C8WK97 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=C8WK97_EGGLE Length = 237 Score = 92.9 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ SR L + + V+V + IRK + + I T+ G Sbjct: 172 ILHVLMRSPDKVFSRELLYELVWKNGYYGEQNAVNVHVSNIRKKLAAAGGAGDYIKTVWG 231 Query: 61 EGYRFC 66 G++ Sbjct: 232 IGFKLA 237 >UniRef50_D1BPS5 Two component transcriptional regulator, winged helix family n=3 Tax=Veillonella RepID=D1BPS5_VEIPT Length = 224 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + SR ++L + + + + +DV I+ +RK T + ++I T+ G Sbjct: 158 LFYLASNENIVLSRQQILDHVWEYDYESYSNLIDVYIKNLRKKI-DTDENVKLIQTVRGV 216 Query: 62 GYRFCGD 68 GY + Sbjct: 217 GYVLKTE 223 >UniRef50_B8HQE6 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B8HQE6_CYAP4 Length = 228 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F +PG++ SR +LL ++ G + P VDV + +RK E+I T+ G G Sbjct: 164 ETFFRHPGQVLSREQLLDRVWGYDYDPGSNIVDVYVGYLRKKLG-----NELIETVRGMG 218 Query: 63 YRFCGDL 69 YR + Sbjct: 219 YRLKLPV 225 >UniRef50_B7K7W8 Multi-component transcriptional regulator, winged helix family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K7W8_CYAP7 Length = 799 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 36/71 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N +I S++ L++ + + P + V I+ +R+ + +P +I T++G Sbjct: 157 ILELFLRNRNRIFSQSALIEHLWSFDEAPTENAVRTQIKSLRQKLKKAGASPNLIETVYG 216 Query: 61 EGYRFCGDLED 71 GYR ++ D Sbjct: 217 LGYRLNKNVLD 227 >UniRef50_D1BL25 Two component transcriptional regulator, winged helix family n=3 Tax=Veillonella RepID=D1BL25_VEIPT Length = 229 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N + S+ EL ++ G + TV V I R+R+ E P + I T+ G Sbjct: 165 LEFLMRNRDIVFSKEELYSRVWGLDSYGDYATVAVHINRLREEIEDNPSDSKHIITVWGV 224 Query: 62 GYRFC 66 GY+F Sbjct: 225 GYKFV 229 >UniRef50_B2G959 Two-component response regulator n=13 Tax=Lactobacillus RepID=B2G959_LACRJ Length = 236 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G++ +R +L+ + G ++ R VD+ I +R E P + T+ G Sbjct: 172 LSYLVDHKGQVLNRDQLVNGVWGYDILDTSRIVDIHISHLRDKLEDDSQHPTHLLTVRGF 231 Query: 62 GYRFC 66 GY+F Sbjct: 232 GYKFV 236 >UniRef50_UPI000196AEE3 hypothetical protein CATMIT_00609 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AEE3 Length = 238 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ +PG + S ++ K+ E + T+ V IR++R+ E P TP I T+ G Sbjct: 172 ILVLLASHPGTVFSTEDIYTKIWHEEATHANNTIMVHIRKLREKIERQPRTPRHIITVWG 231 Query: 61 EGYRFC 66 GY+F Sbjct: 232 IGYKFE 237 >UniRef50_B5I213 Regulatory protein n=3 Tax=Streptomyces RepID=B5I213_9ACTO Length = 221 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +NP ++ +R +L+ + G RTVDV I R+R+ + I T+ Sbjct: 154 LAHLVQNPHRVHTRDQLVTTVWGYGHVGDGRTVDVHIARLRRKLGADFRGA--IQTVRRV 211 Query: 62 GYRFCGDLED 71 GY++ D Sbjct: 212 GYKYTPPTGD 221 >UniRef50_D0WJB9 Transcriptional regulator n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJB9_9ACTN Length = 227 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P +I SR LL ++ G + RTVDV +RR+R P+ + I T+ G Sbjct: 164 LSFLVTHPDRIYSREVLLSQVWGFDYYGGSRTVDVHVRRLRAKLG--PEVAQRIETVRGA 221 Query: 62 GYRFC 66 GY + Sbjct: 222 GYLWS 226 >UniRef50_A7K1J9 DNA-binding response regulator n=13 Tax=Vibrionaceae RepID=A7K1J9_VIBSE Length = 243 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ S+ ELL + + TV TI R+R + I T+ G Sbjct: 176 LQFLATRPGRVYSKDELLDHVWNTSHSGYHHTVCSTINRLRSKLSLSDSDHHFIQTVWGV 235 Query: 62 GYRFCG 67 GY+F Sbjct: 236 GYKFQP 241 >UniRef50_Q026B5 Two component heavy metal response transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026B5_SOLUE Length = 238 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G+ SR +++ + + VDV IR +R ++I T+ G Sbjct: 156 ILEYMMRNKGRPLSRTMIVEHVWDMDYDGLTNIVDVYIRHLRSKI-DDRFQQKLIQTVRG 214 Query: 61 EGYRFCGDLE 70 GY + Sbjct: 215 IGYMIEAPDK 224 >UniRef50_A6LXW1 Two component transcriptional regulator, winged helix family n=5 Tax=Firmicutes RepID=A6LXW1_CLOB8 Length = 238 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 39/71 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + P K +R EL+ G + +DR VD ++ IR+ E+ P P+ I T+HG Sbjct: 165 ILMTLLKYPNKTFTREELISTALGDDYDGYDRNVDTHVKNIRQKIETNPKDPQYIITVHG 224 Query: 61 EGYRFCGDLED 71 GYRF G+ + Sbjct: 225 TGYRFGGEFNE 235 >UniRef50_A6TM13 Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TM13_ALKMQ Length = 231 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +PGK+ SR +LL K+ G R +D+ I +RK ++I TI G Sbjct: 167 LLLFVTHPGKVFSRDDLLTKLWGESFVSETRVIDMHISSLRKKL--DDSDNQLIETIRGV 224 Query: 62 GYRFCG 67 GYR Sbjct: 225 GYRLRK 230 >UniRef50_B3E8G4 Two component transcriptional regulator, winged helix family n=4 Tax=Desulfuromonadales RepID=B3E8G4_GEOLS Length = 233 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ SR EL+ K G + ++R+VD I+ +R+ E PE I T++G Sbjct: 163 LQALAASPGRTYSRDELVSKALGYQFDGYERSVDAHIKNLRQKIELDSRKPEFIKTVYGI 222 Query: 62 GYRFCGDLE 70 GY F G+ + Sbjct: 223 GYLFSGERD 231 >UniRef50_A6LXL2 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridiaceae RepID=A6LXL2_CLOB8 Length = 238 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 37/67 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NP ++ SR +L++K G + DRTVD I+ IR+ ES P I T++G Sbjct: 165 ILTVFLSNPTQVFSREKLVEKAFGANYEGFDRTVDSYIKNIRQKIESNHKEPTYITTVYG 224 Query: 61 EGYRFCG 67 GY+F Sbjct: 225 MGYKFIP 231 >UniRef50_A4XGM2 Two component transcriptional regulator, winged helix family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XGM2_CALS8 Length = 221 Score = 92.9 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +N ++SR E+L+K+ G + RTVDV I+++R+ + +I T+ G Sbjct: 156 LLFLAKNKDLVKSRDEILEKVWGFDFIGETRTVDVHIKQLREKLKDY---KFLIKTVWGV 212 Query: 62 GYRFCGDLE 70 GY+ D E Sbjct: 213 GYKLSEDKE 221 >UniRef50_Q2S514 Response regulator DrrA n=3 Tax=Rhodothermaceae RepID=Q2S514_SALRD Length = 237 Score = 92.5 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P K +R +LL+ + + +RTVD I+ +R+ I T+ G Sbjct: 168 LRYLVRHPRKAFTRQQLLETIWKDAMMVTERTVDAHIKNLREKLGDFAKH---IQTVRGV 224 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 225 GYRFVQEEE 233 >UniRef50_A7GA24 DNA-binding response regulator n=10 Tax=Clostridium RepID=A7GA24_CLOBL Length = 225 Score = 92.5 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP KI SR EL+ ++ + +DR +D I+ IR + P I TI G Sbjct: 159 ILFILARNPNKIFSREELMDYISRDNICIYDRIIDTHIKNIRAKLDQDSKNPTYIKTIRG 218 Query: 61 EGYRFC 66 GYRF Sbjct: 219 MGYRFN 224 >UniRef50_Q04AR8 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=8 Tax=Bacteria RepID=Q04AR8_LACDB Length = 225 Score = 92.5 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG + SR E++ ++ RTVDV +R +R+ I T+ G Sbjct: 161 LKLLITHPGTVFSREEIMDQIWETGFYGETRTVDVHVRTLRQKLGEAGKH---IETVRGV 217 Query: 62 GYR 64 GYR Sbjct: 218 GYR 220 >UniRef50_B2GF54 Two-component response regulator n=14 Tax=Lactobacillus RepID=B2GF54_LACF3 Length = 229 Score = 92.5 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 31/64 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S ++ +++ +E +TV V + +R E+ ++I T+ G Sbjct: 162 ILYLLASHPNRVFSADDIFERVWQQESVVSAKTVMVHVSHLRDKIEAATGGEKVIETVWG 221 Query: 61 EGYR 64 GY+ Sbjct: 222 VGYK 225 >UniRef50_C6LJU9 Two-component response regulator for energy transfer from phycobilisomes to photosystem n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LJU9_9FIRM Length = 141 Score = 92.5 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +PG + ++ ++ +++ + + D ++ IR +RK E+ P P+ I T+ G Sbjct: 72 LTYMARHPGWVFTKKQIYEELYEDVQTENIDNSIYCLIRGLRKKIEADPGNPKYIQTVRG 131 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 132 IGYKFTIPEE 141 >UniRef50_C8WRL2 Two component transcriptional regulator, winged helix family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL2_ALIAD Length = 231 Score = 92.5 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP K+ S+ +L ++ G + V+ + +RK PD P I T+ G Sbjct: 159 LELFMRNPNKVLSKEVILDRVWGPDADVIGNAVENYVHFLRKKI-DEPDLPSYITTVRGV 217 Query: 62 GYRFCGDL 69 GY F D Sbjct: 218 GYMFHPDP 225 >UniRef50_C6J6L0 Response regulator n=2 Tax=Bacillales RepID=C6J6L0_9BACL Length = 241 Score = 92.5 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ PG + +R +L+ + G + RTVDV + +RK E P + I +I G Sbjct: 168 VLLYLARKPGVVMTRDDLMNAVWGFDYIGGQRTVDVHVSSLRKKLELDPQS-VHIDSIRG 226 Query: 61 EGYRFC 66 GY+ Sbjct: 227 VGYKLV 232 >UniRef50_Q1DCL7 DNA-binding response regulator n=6 Tax=Cystobacterineae RepID=Q1DCL7_MYXXD Length = 232 Score = 92.5 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + HF +PG+ +R ELL G + RTVD +R++R FE P+ P T+ G Sbjct: 167 LAHFLAHPGRTFTREELLSGAWGYHYEGSARTVDNFMRQLRLKFEPDPEAPRHFLTVRGL 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFE 231 >UniRef50_P0AA18 Transcriptional regulatory protein ompR n=242 Tax=Bacteria RepID=OMPR_ECO57 Length = 239 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P + SR +L+ GRE +R++DV I R+R+ E P P I T+ G Sbjct: 168 VLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWG 227 Query: 61 EGYRFCGD 68 GY F D Sbjct: 228 LGYVFVPD 235 >UniRef50_D1C5Q5 Two component transcriptional regulator, winged helix family n=52 Tax=Bacteria RepID=D1C5Q5_SPHTD Length = 244 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +P ++ +R +++++ G + ++V + +R+H E+ P ++ T+ G Sbjct: 169 LLLFMRHPNQVLTRDVIMERVWGYDFPGESNVLEVYVSNLRRHLEA-GGEPRLLQTVRGA 227 Query: 62 GYRFCGDLED 71 GY E+ Sbjct: 228 GYALRLPTEE 237 >UniRef50_C7N192 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Bacteria RepID=C7N192_SLAHD Length = 229 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M F ++PG++ ++ ++ + + + +V V + R+R I TI G Sbjct: 165 IMAMFMQHPGRVFTKQQIYECGWDEDYVAAENSVMVCMSRLRSKLGDDGQEA--IKTIRG 222 Query: 61 EGYRFCG 67 GYR Sbjct: 223 LGYRLEK 229 >UniRef50_Q49ZT8 Heme response regulator hssR n=7 Tax=Staphylococcus RepID=HSSR_STAS1 Length = 224 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ +R L++K+ G + + +RTVDV I+R+RK E + I T+ G Sbjct: 158 LFLLASNPRQVFNRDALIEKIWGFDYEGDERTVDVHIKRLRKRLEKIDAS-VTIHTVRGL 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_C7NAQ8 Two component transcriptional regulator, winged helix family n=10 Tax=Bacteria RepID=C7NAQ8_LEPBD Length = 227 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N GKI R + + E + +DV IR +RK TP++I TI G Sbjct: 157 ILEYLIRNKGKILPRERIEDHIWNYEYEGGTNVIDVYIRYLRKKI-DDSYTPKLIHTIRG 215 Query: 61 EGYRFCGDLED 71 GY D E+ Sbjct: 216 LGYVLRVDNEN 226 >UniRef50_B0TCF4 Two-component response regulator resd n=4 Tax=Firmicutes RepID=B0TCF4_HELMI Length = 240 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFES-TPDTPEIIATIHG 60 +L+ +N G++ SR LL ++ G E RTVD +RR+R+ +P + T+ G Sbjct: 172 LLYLAQNAGRVLSRDLLLDRVWGYEFAGDSRTVDTHVRRLREKLSRISPAVASYVGTVRG 231 Query: 61 EGYRFC 66 GY+F Sbjct: 232 SGYKFE 237 >UniRef50_C6QDD0 Two component transcriptional regulator, winged helix family n=5 Tax=Proteobacteria RepID=C6QDD0_9RHIZ Length = 262 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G++ +R LL+ + P +DV + R+R + D P ++ T+ G Sbjct: 195 LEYLMQHAGQVVTRTMLLEHVWDYHFDPQTNVIDVHVSRLRAKIDKNFDKP-LLHTVRGA 253 Query: 62 GY 63 GY Sbjct: 254 GY 255 >UniRef50_C4L0X3 Two component transcriptional regulator, winged helix family n=10 Tax=Firmicutes RepID=C4L0X3_EXISA Length = 230 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 32/63 (50%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 H +N + SR LL + G +TVDV IRR+R+ E P P I T+ G GY Sbjct: 164 HLVQNEEIVLSRDALLDAVWGVNYFGDRKTVDVNIRRLRQKIEDDPSHPVYIETLWGHGY 223 Query: 64 RFC 66 ++ Sbjct: 224 KWR 226 >UniRef50_A4AL32 Putative two-component system response regulator n=2 Tax=Actinobacteria (class) RepID=A4AL32_9ACTN Length = 266 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG+ SR +LLK + G E TV VT+RR+R+ E+ P P I+AT+ G Sbjct: 198 LAFLLKHPGQAFSREQLLKSVWGWEF-GDLSTVTVTVRRLREKIETDPTHPTILATVWGV 256 Query: 62 GYRFC 66 GYR Sbjct: 257 GYRLN 261 >UniRef50_B1YK44 Two component transcriptional regulator, winged helix family n=5 Tax=Bacillales RepID=B1YK44_EXIS2 Length = 228 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N K+ SR +LL ++ G + + RTVD I+ +R + I T+ G Sbjct: 165 LHLFVQNNDKVFSREQLLDQIWGADYIGNLRTVDTHIKTLRLKLGEAGGS---IQTVWGI 221 Query: 62 GYRFC 66 GY+F Sbjct: 222 GYKFE 226 >UniRef50_C0WUJ3 Response regulator n=3 Tax=Lactobacillus RepID=C0WUJ3_LACBU Length = 242 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + + ++ SR +LL+ + G + R VD+ I +R+ E P P+ + TI G G Sbjct: 172 QYLVGHENQVLSRDQLLQGVWGFDYSGQSRMVDIQIAHLREKIELDPKRPKYLKTIRGFG 231 Query: 63 YRFCGDLED 71 Y F +D Sbjct: 232 YEFSTGGDD 240 >UniRef50_B9CPY7 DNA-binding response regulator n=3 Tax=Staphylococcus RepID=B9CPY7_STACP Length = 225 Score = 92.5 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP I +R ++++K+ G + + DRTVDV I+R+R+ + I T+ G+ Sbjct: 159 LFLLVSNPKHIFTRNDIIEKIWGFDYEGDDRTVDVHIKRLRQKLSRLGASIS-IHTVRGQ 217 Query: 62 GYRFCGDL 69 GY+ D+ Sbjct: 218 GYKVNQDV 225 >UniRef50_C7N5H9 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5H9_SLAHD Length = 234 Score = 92.1 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 29/64 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P + +R ++L + G V V IR++R+ E+ P P I T G Sbjct: 169 ILLLMARRPNVVFTRQQILDSVWGYGYVGSSGVVAVFIRKLREKIEADPSRPVHIITEWG 228 Query: 61 EGYR 64 GYR Sbjct: 229 VGYR 232 >UniRef50_Q2SL72 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=56 Tax=Proteobacteria RepID=Q2SL72_HAHCH Length = 264 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ SR E+ + G E DR++DV + RIR P P I T+ + Sbjct: 197 LWLLASSAGRVLSREEIFTALRGIEYDGQDRSIDVRVSRIRPKIGDDPVHPRRIKTVRSK 256 Query: 62 GYRFCGD 68 GY F + Sbjct: 257 GYLFVKE 263 >UniRef50_Q21DY6 Phosphate regulon transcriptional regulatory protein phoB n=3 Tax=Gammaproteobacteria RepID=Q21DY6_SACD2 Length = 234 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + ++ +R +LL + G + +RTVDV IRR+RK I T+ G Sbjct: 164 LEFFLTHQERVYTRNQLLDHVWGGNVYVEERTVDVHIRRLRKALSLEG-HDRFIQTVRGA 222 Query: 62 GYRFCGDL 69 GYRF + Sbjct: 223 GYRFSNKV 230 >UniRef50_A9G6M8 Two-component response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G6M8_SORC5 Length = 233 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ +RA+L+ ++ G DRT+D ++ +RK ++I T+ G Sbjct: 159 LACMLAAPGRVFTRAQLIDRVWGDGFAITDRTIDSHVKGLRKKVVEAGGDADLIETVRGV 218 Query: 62 GYR 64 GYR Sbjct: 219 GYR 221 >UniRef50_B9XFI9 Two component transcriptional regulator, winged helix family n=1 Tax=bacterium Ellin514 RepID=B9XFI9_9BACT Length = 226 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG+ +R ++L + G ++ +DR+VD + +R E+ P P +I TI Sbjct: 161 LEFFATRPGRALTRDQILDGVWGNDIVVNDRSVDRCVTTLRAKIETNPHQPVLIQTIRDV 220 Query: 62 GYRFCG 67 GYRF Sbjct: 221 GYRFES 226 >UniRef50_B9XEM3 Two component transcriptional regulator, winged helix family n=1 Tax=bacterium Ellin514 RepID=B9XEM3_9BACT Length = 226 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG+ SR L + G P RTVD I +R ES P+ P I T+HG Sbjct: 161 LRLLSEAPGEPISRERFLDVVWGYAAFPTTRTVDNHIASLRAKIESDPEKPRWIKTVHGV 220 Query: 62 GYRFCG 67 GYR G Sbjct: 221 GYRLEG 226 >UniRef50_A5IKU4 Two component transcriptional regulator, winged helix family n=6 Tax=Thermotogaceae RepID=A5IKU4_THEP1 Length = 220 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L EN GK+ +R +LL+ E R VD I+RIRK E P+ P I TI G Sbjct: 153 ILLFLAENAGKVVTREKLLETFW--EDPVSPRVVDTVIKRIRKAIEDDPNRPRYIKTIWG 210 Query: 61 EGYRFCGDLE 70 GY F G Sbjct: 211 VGYMFTGGER 220 >UniRef50_B1YEH2 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YEH2_EXIS2 Length = 222 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ SR EL++ + G + DRTVDV I+R+R I T+ G Sbjct: 157 LHQLASFPGRVFSREELIEHVWGLDFMGDDRTVDVHIKRLRTRLHQ--TEAITIETVRGL 214 Query: 62 GYRFC 66 GYR Sbjct: 215 GYRLE 219 >UniRef50_C0X3L2 Response regulator n=22 Tax=Enterococcus faecalis RepID=C0X3L2_ENTFA Length = 240 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F ENP ++ S+ ++ + G T+ V I R+R E P P + T+ G G Sbjct: 170 QFFLENPEQVFSKEQIYSSVWG-TGDVDANTIMVFINRLRSKLEENPKEPCYLRTVWGIG 228 Query: 63 YRFCGD 68 Y F D Sbjct: 229 YTFTPD 234 >UniRef50_B0G6A2 Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A2_9FIRM Length = 85 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+PG + S E+ + + E V I ++RK + I T+ G Sbjct: 15 VLKYLTEHPGWVFSHEEIYRNVWKEEPIDCANAVMCCISQLRKKLKVDSRNWNYIRTVRG 74 Query: 61 EGYRFCG 67 GY+F Sbjct: 75 VGYKFQP 81 >UniRef50_Q8VTU3 Putative response regulator RR23 n=1 Tax=Listeria monocytogenes RepID=Q8VTU3_LISMO Length = 225 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+I +R EL++++ R+ DRTVDV I+R+R HF I T+ G Sbjct: 159 LYQLASYPGRIFTREELIERIWQRDYDGSDRTVDVHIKRLRDHF-DEEKDGIRIVTVRGV 217 Query: 62 GYRFC 66 GY+ Sbjct: 218 GYKLE 222 >UniRef50_Q4ZQ24 Response regulator receiver:Transcriptional regulatory protein, C-terminal n=9 Tax=Gammaproteobacteria RepID=Q4ZQ24_PSEU2 Length = 247 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ SR E+ + G DR++DV I RIR P P +I T+ + Sbjct: 169 LWLLVANAGRTLSREEIFTALRGVGYDGQDRSIDVRISRIRPKIGDDPIHPRLIKTVRSK 228 Query: 62 GYRFCGD 68 GY F + Sbjct: 229 GYLFVPE 235 >UniRef50_C9LC31 Regulatory protein VanR n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LC31_RUMHA Length = 243 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 32/64 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P + ++ L + + G++ D T++V I ++RK E + I T+ G Sbjct: 178 LQLLIKHPKQTFTKESLYQLIWGKDYISDDNTLNVHISKLRKKLEHIGNQAPYIDTVWGI 237 Query: 62 GYRF 65 GY+ Sbjct: 238 GYKL 241 >UniRef50_UPI0001AEBD7C two component transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBD7C Length = 250 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPD---TPEIIATI 58 + +FC +P ++ SR +LL ++ G + ++ TV+ I R+R + +++ T+ Sbjct: 172 LDYFCRHPNQVFSRNQLLSEVWGYNHEGYEHTVNTHINRLRTKLDKINSIENGGQLVETV 231 Query: 59 HGEGYRFC 66 G GY+ Sbjct: 232 WGVGYKLN 239 >UniRef50_Q4ZUU7 Response regulator receiver:Transcriptional regulatory protein, C-terminal n=18 Tax=Proteobacteria RepID=Q4ZUU7_PSEU2 Length = 259 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 38/66 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E P ++ SR +LL GR ++ DR++D+ + R+R+ P P++I T+ GE Sbjct: 190 LRVFLERPHRVLSREQLLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKNPQLIKTVRGE 249 Query: 62 GYRFCG 67 GY F Sbjct: 250 GYLFDA 255 >UniRef50_B8FLX7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B8FLX7_DESAA Length = 235 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 39/67 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PGK+ SR EL+ K+ GR + +DR +D I+ +RK + E I +++G Sbjct: 168 LHAFMAHPGKVFSRDELIAKIQGRTYEGYDRNIDWHIKNLRKKLIAAQPGLEPIESVYGV 227 Query: 62 GYRFCGD 68 GY+F + Sbjct: 228 GYKFILE 234 >UniRef50_A6LZK7 Two component transcriptional regulator, winged helix family n=7 Tax=Firmicutes RepID=A6LZK7_CLOB8 Length = 226 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ S+A L + + E D T++V I IR +S E I TI G Sbjct: 161 ILFLLLSHPQKVFSKANLFESIWNEEYFSEDNTLNVHISNIRNKLKSANANEEYIETIWG 220 Query: 61 EGYRF 65 GY+ Sbjct: 221 MGYKL 225 >UniRef50_Q2FY79 Transcriptional regulatory protein srrA n=168 Tax=Firmicutes RepID=SRRA_STAA8 Length = 241 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT-PEIIATIHG 60 +++ + P K+ R +LLK++ E RTVD ++R+R+ +I T+ G Sbjct: 167 LIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAAHMIQTVWG 226 Query: 61 EGYRFCGDLED 71 GY+F D Sbjct: 227 VGYKFEVKSND 237 >UniRef50_Q894P5 Transcriptional regulatory protein n=4 Tax=Clostridiales RepID=Q894P5_CLOTE Length = 231 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 34/63 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LH + P ++ + EL + + G + TV V IRRIR+ E P P+ I T+ G Sbjct: 166 LLHMAQYPNRVFGKDELFESIWGLDSIGDSATVTVHIRRIREKIEFNPSKPQYIETVWGV 225 Query: 62 GYR 64 GYR Sbjct: 226 GYR 228 >UniRef50_B3DZZ9 DNA-binding response regulator, OmpR family (REC-wHTH domains) n=6 Tax=Bacteria RepID=B3DZZ9_METI4 Length = 268 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ +R ++ +++ P VDV I+++RK + ++I T+ G Sbjct: 202 ILELLMRTPGRVFTRTQVCERVWNYHFDPGTNLVDVYIQKLRKKI-DEGEEQKLIQTVRG 260 Query: 61 EGYRFCG 67 GY+ Sbjct: 261 VGYKIEA 267 >UniRef50_A8SVV6 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SVV6_9FIRM Length = 228 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +N G++ +R +++K+ E + T++V IRR+R+ E PE + T+ Sbjct: 160 ILELLIKNKGRVLTRDMIIQKIWDDNENYVDENTLNVHIRRLRQKIEKDAGNPEYVITVF 219 Query: 60 GEGYRF 65 G GY F Sbjct: 220 GIGYTF 225 >UniRef50_Q5WKN6 Two-component response regulator n=2 Tax=Firmicutes RepID=Q5WKN6_BACSK Length = 227 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P + S +LL K+ + TV V + R+R+ E+ P+ P+ I + G Sbjct: 163 LQLFLEHPRHVFSYDQLLDKLW--DGVGDKHTVRVHLSRLREKIEANPNDPQYIVNVWGI 220 Query: 62 GYRFCG 67 GYRF G Sbjct: 221 GYRFEG 226 >UniRef50_B1WRX4 Two component transcriptional regulator n=11 Tax=Cyanobacteria RepID=B1WRX4_CYAA5 Length = 225 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR ++L+++ G + ++V +R +R E+ +I T+ G Sbjct: 161 LEYLMSHPKQVLSRDQILERVWGYDFMGDSNIIEVYVRYLRLKLEAE-QEKRLIQTVRGV 219 Query: 62 GYRFC 66 GY Sbjct: 220 GYVLR 224 >UniRef50_B2TJU3 Regulatory protein VanR n=9 Tax=Firmicutes RepID=B2TJU3_CLOBB Length = 230 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S E+ +K+ + + TV V + R+R E + +II T+ G Sbjct: 164 ILYLLATNRGRVFSAEEIFEKVWKEKYYQSNNTVMVHMSRLRDKLEKHMEGNKIIHTVWG 223 Query: 61 EGYRFCG 67 GY+ Sbjct: 224 VGYKIEK 230 >UniRef50_C7H3Q1 KDP operon transcriptional regulatory protein KdpE n=2 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3Q1_9FIRM Length = 143 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 36/70 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++PGK+ ++ ++ + + ++ + + R V TI RIR+ E D P I T+ Sbjct: 66 VLSLMAQHPGKLFTKEQIFEAVWHKDSESYLRAVTSTIGRIRQKIEDDKDHPRYIKTVSN 125 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 126 IGYQFVPSSE 135 >UniRef50_A5N471 VanR n=21 Tax=Bacteria RepID=A5N471_CLOK5 Length = 232 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + C N G++ S EL ++ G + + TV V IR +R+ + + P+ I T+ Sbjct: 165 ILWVLCSNRGRVVSSEELFHEVWGDKYFTNSNNTVMVHIRHLREKMHGSAEHPKYIKTVW 224 Query: 60 GEGYRFCG 67 G GY+ Sbjct: 225 GVGYKIEK 232 >UniRef50_B1ZQC8 Two component transcriptional regulator, winged helix family n=6 Tax=Bacteria RepID=B1ZQC8_OPITP Length = 241 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ SR +L G + +DR++D+ + R+R+ P P I T+ G Sbjct: 172 LGYLARNRGRVMSRDRILDGTRGIDWDAYDRSIDILVSRLRQKLGDDPKRPTFIRTVRGV 231 Query: 62 GYRFCGDLED 71 GY F G + Sbjct: 232 GYSFIGGGRE 241 >UniRef50_A4FEZ3 Two-component response regulator n=4 Tax=Bacteria RepID=A4FEZ3_SACEN Length = 234 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +PG+ SRAELL+++ G TV V +RR+R+ E P P I T+ G Sbjct: 168 LVFLLRHPGRAFSRAELLEQVWGWSF-GDHSTVTVHMRRLREKVEPDPARPVRINTVWGV 226 Query: 62 GYRFCG 67 GYR+ Sbjct: 227 GYRYDP 232 >UniRef50_B8G869 Two component transcriptional regulator, winged helix family n=3 Tax=Chloroflexus RepID=B8G869_CHLAD Length = 245 Score = 91.3 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +R LL ++ G V+V I +R+ ++I T++G Sbjct: 175 LEQFMRHPRRVFTRQTLLSRVWGFTYVGDSNIVEVHISNLREKIGDH--ERKLIRTVYGV 232 Query: 62 GYRFCGDLE 70 GY D E Sbjct: 233 GYTLRPDDE 241 >UniRef50_C9XSY6 Two-component response regulator n=15 Tax=Firmicutes RepID=C9XSY6_CLODC Length = 241 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +N + SR ++L+K+ +D T+ V I+R+R+ P I T+ G Sbjct: 168 LLILIQNKNTVLSRTQILEKLWDVTYDFVNDNTLTVYIKRLREKIGDDLCEPIYIETVRG 227 Query: 61 EGYRFCG 67 GY++ G Sbjct: 228 IGYKWIG 234 >UniRef50_C6IVK1 Response regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVK1_9BACL Length = 113 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR LL+++ + RTVD+ ++R+RK + I T++G Sbjct: 48 LALLAGHPGRVYSREALLEQVWDMDFAGGTRTVDMHVQRLRKKLGQWN---DCIQTVYGI 104 Query: 62 GYR 64 GY+ Sbjct: 105 GYK 107 >UniRef50_D2LY16 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillus RepID=D2LY16_BACS4 Length = 228 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F ENP + SR +L++++ ++ DRT+D I+++R+ E P P+ I T+ G Sbjct: 162 LFYFMENPNIVLSREQLIQQIHPHTDVDILDRTIDAHIKKLREKIEDVPSKPKKIQTVRG 221 Query: 61 EGYRFC 66 GYRF Sbjct: 222 MGYRFV 227 >UniRef50_A7X5Y5 Heme response regulator hssR n=71 Tax=Bacillales RepID=HSSR_STAA1 Length = 224 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P +I +R ++++K+ G + + +RTVDV I+R+R+ + T I T+ G+ Sbjct: 158 LFMLAARPKQIFTREQIIEKIWGYDYEGDERTVDVHIKRLRQRLKKLNATLT-IETVRGQ 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_C9XR57 Two-component response regulator n=11 Tax=Clostridiales RepID=C9XR57_CLODC Length = 244 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 33/69 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N + SR ++L ++ G + VDV IRRIR E P P+ I TI G Sbjct: 176 IVKYLISNAKQSLSRDQILDEVWGTNYLYDFKIVDVNIRRIRNKIEDDPSKPKYIQTIWG 235 Query: 61 EGYRFCGDL 69 GY F + Sbjct: 236 YGYCFRKEE 244 >UniRef50_Q2BM87 DNA-binding response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BM87_9GAMM Length = 236 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++P +I SR +LL G P+DR++DV + R+RK E P PE+I T++G Sbjct: 170 LLALLKHPYQILSRDQLL----GENCVPYDRSIDVRMSRLRKKIEEDPQQPELIKTVYGA 225 Query: 62 GYRFCGDLE 70 GY F ++ Sbjct: 226 GYMFTSEVR 234 >UniRef50_Q2JPV2 DNA-binding response regulator n=17 Tax=Bacteria RepID=Q2JPV2_SYNJB Length = 230 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+P ++ +R ++L+ + G + ++V IR +R E P +I T+ G Sbjct: 166 LRYLMEHPRQVLTRQQILEHVWGCDFTGDSNIIEVYIRYLRLKIE-GPGEKRLIQTVRGV 224 Query: 62 GYRFC 66 GY Sbjct: 225 GYVLR 229 >UniRef50_Q26IA7 Transcriptional regulatory protein n=3 Tax=Bacteroidetes RepID=Q26IA7_9BACT Length = 238 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG+ SR+ELL + G ++ TV+ I R+R E P I T G Sbjct: 171 LILLANYPGRSYSRSELLDVIWGYNFSGYEHTVNSHINRLRAKIEPDMGNPIYILTTWGI 230 Query: 62 GYRFCGDL 69 GYRF D+ Sbjct: 231 GYRFNEDI 238 >UniRef50_Q5KTV1 Putative uncharacterized protein n=1 Tax=Staphylococcus aureus RepID=Q5KTV1_STAAU Length = 232 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ENP KI S+A L + + + + TV+V + +R T I TI G Sbjct: 166 ILQLLMENPQKIYSKANLFETVWEDKFHGDENTVNVHMSNLRNKLAQNNATDTYIETIWG 225 Query: 61 EGYRF 65 GYR Sbjct: 226 IGYRL 230 >UniRef50_B8FS97 Two component transcriptional regulator, winged helix family n=6 Tax=Firmicutes RepID=B8FS97_DESHD Length = 239 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G I + L + + G +L ++ T+ V IRR+R+ E P +P + T+ G Sbjct: 170 LAKLYENRGSIVTGDSLCRAVWGDDLYGYENTLMVHIRRLREKIEPEPSSPRYLLTVRGL 229 Query: 62 GYRFCGDLE 70 GY+ G +E Sbjct: 230 GYKLTGVVE 238 >UniRef50_B7K5A2 Two component transcriptional regulator, winged helix family n=8 Tax=Cyanobacteria RepID=B7K5A2_CYAP8 Length = 231 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ +R ++L+ + G + + ++V IR +R ES +I T+ G Sbjct: 166 LKYLMSHPKEVLTREKILENVWGYDFQGESNVIEVYIRYLRLKIESEG-HKRLIHTVRGV 224 Query: 62 GYRFC 66 GY Sbjct: 225 GYVLR 229 >UniRef50_D0LUI4 Putative two component transcriptional regulator, winged helix family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUI4_HALO1 Length = 258 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ G++ +R +LL+K+ E RTVD+ +RR+R +I T+ Sbjct: 189 LRFLAQHRGRVFTRDQLLQKVWSYEYTGGTRTVDIHVRRVRAKL---GAQGTLIETVRNV 245 Query: 62 GYRFCG 67 GY+ Sbjct: 246 GYKMRA 251 >UniRef50_A5WB94 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=A5WB94_PSEP1 Length = 240 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 37/65 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG+I +R ELL K++GR +P DR++D I R+R+ E P P I T G Sbjct: 169 LAALLEKPGEIVTRDELLNKVSGRASEPFDRSIDNQISRLRRKIEPDPKNPIYIRTHWGG 228 Query: 62 GYRFC 66 GY F Sbjct: 229 GYAFV 233 >UniRef50_B1XXD9 Two component transcriptional regulator, winged helix family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXD9_LEPCP Length = 263 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL + G + RTVD IRR+R+ FE+ E+I T+ G Sbjct: 185 LGCLMAHPDRVLSRDQLLALVWGEDGTTDPRTVDQNIRRLRRCFEAAGA-GELIRTVRGL 243 Query: 62 GYRFC 66 GYR Sbjct: 244 GYRLT 248 >UniRef50_D1VIP6 Two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VIP6_9ACTO Length = 248 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ SRA++L + V+ I +RK ++ P P +I T+ G Sbjct: 184 LRFLLRNAGRAVSRAQILDHVWDYGFDGESTVVETFISSLRKKVDTAP--PTLIHTVRGV 241 Query: 62 GYRFCGD 68 GYR + Sbjct: 242 GYRLSEE 248 >UniRef50_B2TJG9 Regulatory protein VanR n=6 Tax=Firmicutes RepID=B2TJG9_CLOBB Length = 231 Score = 91.0 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L N G + S ++ K++ + + TV V I R+R+ E P P+II T+ G Sbjct: 165 ILLLLANNLGTVFSAEDIFKEVWKEKYFEGNNTVMVHIWRLREKIEENPKEPKIIETVWG 224 Query: 61 EGYRFC 66 GY+ Sbjct: 225 VGYKIE 230 >UniRef50_Q2RUW2 Two component transcriptional regulator, winged helix family n=23 Tax=Proteobacteria RepID=Q2RUW2_RHORT Length = 249 Score = 91.0 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 38/65 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ +R LL ++ R+ P DRTVDV + R+R+ E+ P P I T+HG Sbjct: 166 LCCFASRPGRVMTRDNLLDYVSHRDWAPSDRTVDVLVGRLRRKIEADPKAPRHIITVHGI 225 Query: 62 GYRFC 66 GY F Sbjct: 226 GYVFA 230 >UniRef50_A4CEI9 Transcriptional regulatory protein RstA n=3 Tax=Gammaproteobacteria RepID=A4CEI9_9GAMM Length = 245 Score = 91.0 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G +R EL++ + G + DRTVD+ + ++RK P P I T+ G+ Sbjct: 177 LWLLAERAGNTVTRDELIQALRGFDYDGFDRTVDLIVSKLRKKLNDNPSKPYRIKTVWGK 236 Query: 62 GYRFCG 67 GY Sbjct: 237 GYLLVK 242 >UniRef50_B1WXJ7 Two-component response regulator n=2 Tax=Chroococcales RepID=B1WXJ7_CYAA5 Length = 226 Score = 91.0 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR ++L + G E + ++V IR +R E D +I T+ G Sbjct: 161 LKYLMSHPQEVLSREKILDNVWGEEFQGESNVIEVYIRYLRIKIE-NEDHKRLIHTVRGV 219 Query: 62 GYRFC 66 GY Sbjct: 220 GYVLR 224 >UniRef50_Q01YI3 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=Q01YI3_SOLUE Length = 225 Score = 91.0 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F G++ SR +L+ GR+ R VD I +R+ P P + + G Sbjct: 160 LDVFIRARGRVLSRDQLIAATWGRDTFTSARIVDNHIANLRRKIGDDPAEPRYLRNVRGL 219 Query: 62 GYRFCG 67 GYRF G Sbjct: 220 GYRFDG 225 >UniRef50_A5CZK5 Response regulator n=3 Tax=Clostridiales RepID=A5CZK5_PELTS Length = 240 Score = 91.0 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP + +L++ + R++ V I ++RK E P P+ I ++ G Sbjct: 167 ILALLAKNPNRFFGADQLMEVIWKTRESVDHRSLMVHISKLRKKIEEDPANPKFIISVRG 226 Query: 61 EGYRFCG 67 GY+F Sbjct: 227 FGYKFSS 233 >UniRef50_C5D3X1 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=C5D3X1_GEOSW Length = 232 Score = 91.0 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + NP ++ +R +LL ++ G E RTVDV I+RIR I TI G G Sbjct: 165 YYLAMNPKQVLTRQQLLDRVWGYEFNGDPRTVDVHIKRIRDKLAEHKAKWS-IVTIRGVG 223 Query: 63 YRFCGD 68 YRF + Sbjct: 224 YRFEEN 229 >UniRef50_A9AVR8 Two component transcriptional regulator, winged helix family n=6 Tax=Chloroflexi (class) RepID=A9AVR8_HERA2 Length = 248 Score = 91.0 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G++ R L +++ G E VDV +RR+R+ E P P I T+ G Sbjct: 179 LYFLAANSGQVFDREVLFREVWGYEYVGQTNLVDVCVRRLREKIEEQPSKPRRILTVRGV 238 Query: 62 GYRFC 66 GY+ Sbjct: 239 GYKLA 243 >UniRef50_B1IEF4 Regulatory protein VanR n=17 Tax=Firmicutes RepID=B1IEF4_CLOBK Length = 233 Score = 91.0 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPE-IIATIH 59 + NP K+ S+A + + + G E D TV+V + R+R + E I T+ Sbjct: 166 VLELLLNNPNKVYSKANIFESIWGEEFLGDDNTVNVHVSRLRSKLSKANNNGEDYIETVW 225 Query: 60 GEGYRFCG 67 GYR Sbjct: 226 AMGYRLRK 233 >UniRef50_C4L340 Two component transcriptional regulator, winged helix family n=5 Tax=Bacillales RepID=C4L340_EXISA Length = 229 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N K+ SR +LL ++ G E + RTVD I+ +R I T+ G Sbjct: 165 LYLFITNDEKVFSREQLLDQIWGTEYHGNLRTVDTHIKTLRLKLGEAGG---YIQTVWGI 221 Query: 62 GYRFCGD 68 GY+F + Sbjct: 222 GYKFEAN 228 >UniRef50_C1SP47 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP47_9BACT Length = 234 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP + SR L ++TG + ++RTVD+++ R+R P +P+ I T+ G Sbjct: 163 ILSLMVRNPYILLSRDRLYNELTGFDCDAYNRTVDISVSRLRTKLNDDPKSPKYIKTVWG 222 Query: 61 EGYRFCGD 68 EGY F D Sbjct: 223 EGYMFIAD 230 >UniRef50_Q186H9 Two-component response regulator n=28 Tax=Bacteria RepID=Q186H9_CLOD6 Length = 233 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + CE+ GK+ EL + + G + ++ TV I R+R+ P+ I T+ G Sbjct: 167 ILWYLCEHQGKVVPSEELFEAVWGEKYLDNNNTVMAHIGRLREKIHEPSKNPKFIKTVWG 226 Query: 61 EGY 63 GY Sbjct: 227 VGY 229 >UniRef50_Q2S085 Response regulator DrrA n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S085_SALRD Length = 236 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR E+L ++ GR++ DRTVDV IR+IR+ E I T+ G Sbjct: 176 LYFLASHPGRVFSRQEILDEVWGRDVYVVDRTVDVHIRKIREKIG-----SEYIETVKGV 230 Query: 62 GYRF 65 GYR Sbjct: 231 GYRM 234 >UniRef50_Q2N765 DNA-binding response regulator n=8 Tax=Proteobacteria RepID=Q2N765_ERYLH Length = 248 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P K+ R LL + GRE DR VD + R+R+ E+ P I T+ G Sbjct: 173 LRAFLDHPKKVLDRDRLLDLVQGREAHLFDRAVDNQVSRLRRKIEADSRNPHFIQTVRGG 232 Query: 62 GYRFCGDL 69 GYRF D+ Sbjct: 233 GYRFAADV 240 >UniRef50_C7N1J8 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=4 Tax=Coriobacteriaceae RepID=C7N1J8_SLAHD Length = 231 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + GK+ SR +LL++ G E +TVD I+R+R + P II T+ G Sbjct: 166 LSALMKVAGKVASREDLLREAWGWEYITETKTVDTHIKRLRDKLAAAGFDPGIIETVRGY 225 Query: 62 GYRFCG 67 GYRF Sbjct: 226 GYRFRA 231 >UniRef50_A0PYF5 Two-component response regulator n=8 Tax=Firmicutes RepID=A0PYF5_CLONN Length = 234 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +N K+ ++ EL + + ++ + T+ V ++ +R+ + P+ I T+ G Sbjct: 165 LVVLAQNEHKVFTKKELYENVWNQDNLEGNNTITVHVKGLRQKLKDNVKNPKYIQTVWGT 224 Query: 62 GYRFCGD 68 GY+F G+ Sbjct: 225 GYKFIGE 231 >UniRef50_A8DJW5 Transcriptional regulatory protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJW5_9BACT Length = 242 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ G++ +R LL ++ G + RT+DV IRR+R+ I T G Sbjct: 163 LKLLAQSKGRVLTREYLLDRVWGIDYDGETRTLDVHIRRVRQKLGIDG----YIETAVGI 218 Query: 62 GYRFC 66 GYRF Sbjct: 219 GYRFV 223 >UniRef50_A6NWH9 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWH9_9BACE Length = 147 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 31/69 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ S+A+L G E +V+ I R+RK E P P I T+ G Sbjct: 73 LYCMASSPGQVFSKAQLYAAAWGEEYLHGTNSVENIIWRLRKKLEPDPRNPIYIKTVIGM 132 Query: 62 GYRFCGDLE 70 GY+ Sbjct: 133 GYKMVVPEN 141 >UniRef50_D2SFJ3 Two component transcriptional regulator, winged helix family n=6 Tax=Actinomycetales RepID=D2SFJ3_9ACTO Length = 238 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ +R LL+++ G R V+V ++R+R E P+ PEI+ T+ G Sbjct: 172 LVALARKPRQVFTRELLLEQVWGYRHAADTRLVNVHVQRLRAKIERDPEKPEIVLTVRGV 231 Query: 62 GYR 64 GY+ Sbjct: 232 GYK 234 >UniRef50_B2A8D5 Two component transcriptional regulator, winged helix family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A8D5_NATTJ Length = 234 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P K+ SR L ++ G + RT+D I+ +R+ E P P I T+ G Sbjct: 167 ILSTLALYPKKVFSRENLADRIYGYLWEGDSRTIDTHIKNLRRKIEQNPKKPIFIKTVFG 226 Query: 61 EGYRF 65 GY+F Sbjct: 227 AGYQF 231 >UniRef50_A6TKQ5 Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ5_ALKMQ Length = 236 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P ++ R EL++ + G + + DR +D+ I+R+RK +S I T+ G Sbjct: 167 LKYLMMYPNQVFKREELIEGIWGWDFEGEDRVIDLYIKRLRKRLKSKTKQSWSIKTVWGI 226 Query: 62 GYRFCGD 68 GY+F + Sbjct: 227 GYKFEVE 233 >UniRef50_A4J2J4 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2J4_DESRM Length = 223 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + HF +P ++ +R +++ ++ G + ++V I +R+ E II T+ G Sbjct: 158 LAHFMHHPNQVLTREQIIDRVWGLDFTGGSNVLEVYINMLRQKIEDYGS--RIIHTVRGV 215 Query: 62 GYRFCGD 68 GY Sbjct: 216 GYVLKEQ 222 >UniRef50_C6VZ09 Two component transcriptional regulator, winged helix family n=28 Tax=Bacteroidetes RepID=C6VZ09_DYAFD Length = 236 Score = 90.6 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P K+ SR ELL+K+ G ++ +RTVDV IR++R+ I T+ G Sbjct: 173 LFFLAQTPNKVFSRDELLQKIWGADIYVLERTVDVHIRKLREKLGD-----TYIKTLKGV 227 Query: 62 GYRFCGDLE 70 GY F + E Sbjct: 228 GYMFSNERE 236 >UniRef50_C9KL69 DNA-binding response regulator ArlR n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL69_9FIRM Length = 230 Score = 90.6 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + +R ++L+K+ G + VDV IR +R + I T+ G Sbjct: 166 LEYMMRNKRTVLTRDQILEKVWGYDYSGDTNVVDVYIRYLRAKL-DDRFHEKYIYTVRGV 224 Query: 62 GY 63 GY Sbjct: 225 GY 226 >UniRef50_D0MGI0 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGI0_RHOM4 Length = 243 Score = 90.6 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ +R ELL ++ GR++ DRTVDV IR+IR+ I T+ G Sbjct: 183 LYFLAAHPGKVFTRQELLDEVWGRDVYVVDRTVDVHIRKIREKLG-----SHYIETVKGV 237 Query: 62 GYRFC 66 GY+F Sbjct: 238 GYKFR 242 >UniRef50_C9ZHF5 Putative regulatory protein n=6 Tax=Streptomyces RepID=C9ZHF5_STRSW Length = 202 Score = 90.6 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +P ++ +R +L+ + G RTVDV I R+R+ + I T+ Sbjct: 135 LAHLVAHPHRVHTRDQLVTTVWGYGHVGDGRTVDVHIARLRRKLGAEFRQA--IQTVRRV 192 Query: 62 GYRFCGDLE 70 GY++ L+ Sbjct: 193 GYKYTPPLD 201 >UniRef50_B1C9W9 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9W9_9FIRM Length = 150 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P ++ + +++ + + + R V+ + +R+ +TPD+P+ I ++ Sbjct: 79 ILALLITHPKRVFTYELIMQLVWNEDYSYYSRKAVNNHVSNLRRKLRTTPDSPDYIKSVI 138 Query: 60 GEGYRFC 66 G GY+F Sbjct: 139 GVGYKFE 145 >UniRef50_C8QI30 Two component transcriptional regulator, winged helix family n=1 Tax=Pantoea sp. At-9b RepID=C8QI30_9ENTR Length = 248 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + K+ +R +LL+ L DRT+DV I R+R+ E P P +I TI G Sbjct: 168 LRALVCHARKVLTRDQLLELTHSETLDVFDRTIDVLIMRLRRKIEMNPHQPSLIRTIRGL 227 Query: 62 GYRFCGDL 69 GY F D+ Sbjct: 228 GYVFSADV 235 >UniRef50_Q0SQL4 Two-component response regulator n=10 Tax=Firmicutes RepID=Q0SQL4_CLOPS Length = 233 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P KI +R E+++ + G + DR +D I+ +R E P+ I T++G Sbjct: 164 ILLCLSSYPKKIFTRDEIIELVLGDKSDSFDRVIDSHIKNLRGKIEENTRKPKFIVTVYG 223 Query: 61 EGYRFCG 67 GY+F G Sbjct: 224 VGYKFEG 230 >UniRef50_D1U371 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U371_9DELT Length = 239 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENP +R EL+ GR+ +DR++DV + ++R + I T+ G Sbjct: 172 LRALMENPDTALTRDELMSLAWGRDFSAYDRSIDVHVSKLRSLLRPYAGHDKRIRTVWGT 231 Query: 62 GYRFCG 67 GY F G Sbjct: 232 GYMFVG 237 >UniRef50_C0WE14 Two-component system transcriptional regulator n=1 Tax=Acidaminococcus sp. D21 RepID=C0WE14_9FIRM Length = 234 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P ++ SR +LL+K G + +RT+D IR +RK E P P I T++G Sbjct: 163 LDILASAPDRVFSRMQLLEKAMGGAYYEGAERTIDTHIRNLRKKLEPDPSQPIYIVTVYG 222 Query: 61 EGYRFCG 67 GY+F G Sbjct: 223 VGYKFQG 229 >UniRef50_Q182M4 Two-component response regulator n=14 Tax=Clostridiales RepID=Q182M4_CLOD6 Length = 242 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN + ++ +LL+ + D T+ V IRR+R+ E P P+ I T+ G Sbjct: 170 LKYLMENSMQTLTKEQLLESLWDSSGNFVDDNTIAVNIRRLRQKVEKNPSEPKYIKTVRG 229 Query: 61 EGYRF 65 GY + Sbjct: 230 VGYMW 234 >UniRef50_Q2SNE0 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNE0_HAHCH Length = 244 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATI 58 + + E+ + SR ELL K+ G +L RTVD+ I ++R+ E+ P P+ + T+ Sbjct: 174 VLQYLHEHSERPVSREELLNKVWGYARDLDIETRTVDIHIAKLRRKIEADPKQPQRLVTV 233 Query: 59 HGEGYRF 65 G GYR Sbjct: 234 RGGGYRL 240 >UniRef50_C0C3P9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3P9_9CLOT Length = 241 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG+I +R +LL ++ G + + RTVD I+ +R+ I T+ Sbjct: 177 LYFLMVNPGQIFARDQLLNRIWGYDFEGTTRTVDTHIKTLRQKLGDEGKH---IVTLIRS 233 Query: 62 GYRFCGDL 69 GY+F + Sbjct: 234 GYKFEVAV 241 >UniRef50_D1CG76 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CG76_THET1 Length = 243 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 31/70 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ SR +L G +DV I RIRK P+ P+ IATI G Sbjct: 167 ILQRLMSSPNRVVSRDDLAMYAAGYVADTSSNQIDVYIGRIRKKLGDDPNDPKYIATIRG 226 Query: 61 EGYRFCGDLE 70 GY+F Sbjct: 227 SGYKFLSPDR 236 >UniRef50_B8G179 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridiales RepID=B8G179_DESHD Length = 234 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + P ++ SR LL+K+ G + RTVDV I +R +S II ++ G Sbjct: 164 LHIFMKRPNQVFSREYLLQKVWGYTVSGDTRTVDVHISNLRSKLKSVSP---IIESVRGV 220 Query: 62 GYRFC 66 GYR Sbjct: 221 GYRLA 225 >UniRef50_B3WB53 Response regulator n=35 Tax=Bacilli RepID=B3WB53_LACCB Length = 233 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + + SR +LL + G + +DV IR +R + + ++I T+ G Sbjct: 163 LVELVAHQDEACSRDDLLAAVWGTDFDGQPNILDVYIRNLRHKIDDHSGSKKLIHTVRGV 222 Query: 62 GYRFCGDL 69 GY ++ Sbjct: 223 GYMLSANV 230 >UniRef50_A6LVA4 Two component transcriptional regulator, winged helix family n=7 Tax=Firmicutes RepID=A6LVA4_CLOB8 Length = 234 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG++ S E+ +K+ E D TV V +R IR+ E P+ + + G Sbjct: 168 ILQLLMKNPGRVFSAEEIYEKVWNEEAINTD-TVMVHVRNIREKIEIDTKNPKYLKVVWG 226 Query: 61 EGYRFCGD 68 GY+ Sbjct: 227 VGYKIEKQ 234 >UniRef50_C8X3Y5 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3Y5_DESRD Length = 236 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 38/65 (58%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+ G++ SR ELL+ + E RTVD I R+RK+FE+ P PE I ++ Sbjct: 168 VLKYLIEHEGRVVSRKELLENVWQVEGTVQTRTVDAFIARLRKYFEADPKHPEFITSVRE 227 Query: 61 EGYRF 65 GY+F Sbjct: 228 VGYQF 232 >UniRef50_C0D2V9 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2V9_9CLOT Length = 229 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 HF N + S+ +L + D TV VTIR +R+ E P +P+ + T++G G Sbjct: 164 QHFLHNVNHVFSKEQLYTAVWKDNC-VDDNTVMVTIRNLRQKIEDDPKSPKYLLTVYGIG 222 Query: 63 YRFC 66 Y+F Sbjct: 223 YKFV 226 >UniRef50_UPI0001C42B3F two component transcriptional regulator, winged helix family protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42B3F Length = 231 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E+ G++ +R LL + G + + +RTVD I+ +R + +I T+ G Sbjct: 167 LLFLFEHQGQVFTREHLLTSVWGLDYEGTERTVDTHIKTLRMKLKPYG---NVIQTVWGI 223 Query: 62 GYRFC 66 GY+ Sbjct: 224 GYKLV 228 >UniRef50_A9VUJ1 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus weihenstephanensis KBAB4 RepID=A9VUJ1_BACWK Length = 225 Score = 90.2 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN GK SR ELL ++ G + + V IRR+R+ E P P+ + T+ G Sbjct: 160 ILRCLMENQGKPISRDELLNEIWGVNYVVKTKVIGVNIRRLRQKIEPNPSGPQFLRTVWG 219 Query: 61 EGYRFC 66 +GY + Sbjct: 220 KGYVWR 225 >UniRef50_Q2JAC4 Two component transcriptional regulator, winged helix family n=90 Tax=cellular organisms RepID=Q2JAC4_FRASC Length = 283 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ +R ++ + VD +R +R+ PD P +I T+ G Sbjct: 187 LHLLMRHPDEVLTRTYIVDHVWDFAFDGTSNIVDQYVRYVRRKI-DIPDGPSLIETVRGV 245 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 246 GYRLRTPAE 254 >UniRef50_D0WLW8 DNA-binding response regulator RegX3 n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WLW8_9ACTO Length = 262 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ + ELL K+ G + T+ V +RR+R+ E PD P I T+ G Sbjct: 166 LAYLVANRGRVVEKRELLNKVWGGAVTGDG-TLAVHVRRLRRRIEPDPDNPVYICTVWGR 224 Query: 62 GYRFC 66 GYRF Sbjct: 225 GYRFR 229 >UniRef50_C6MYB5 DNA-binding response regulator n=2 Tax=Legionella RepID=C6MYB5_9GAMM Length = 247 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 43/69 (62%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F E+PG+I +R +L+ + ++ DRT+DV I R+RK E P P+++ TI G Sbjct: 177 LLIFLEHPGRILNRDQLMDLLYDKDCDSQDRTIDVLIGRLRKKIEQDPRNPQLLLTIRGG 236 Query: 62 GYRFCGDLE 70 GY+F ++ Sbjct: 237 GYQFKTKVD 245 >UniRef50_B7ILX3 DNA-binding response regulator n=102 Tax=Firmicutes RepID=B7ILX3_BACC2 Length = 230 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++F +N G + +R +L+ ++ G E DRTV+ IR +R + I T+ Sbjct: 165 ILVYFMKNQGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGE---KAKYITTVVR 221 Query: 61 EGYRFCGDL 69 GY+F G++ Sbjct: 222 TGYKFEGNV 230 >UniRef50_B1KWY3 DNA-binding response regulator n=33 Tax=Firmicutes RepID=B1KWY3_CLOBM Length = 237 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L EN G + SR LL+K+ + T++V I+R+R+ E P PE I T+ G Sbjct: 171 LLILVENKGNVLSRNILLEKIWDVDGSFVDGNTLNVYIKRLREKIEKDPKKPEYIETVRG 230 Query: 61 EGYRFC 66 GYR+ Sbjct: 231 IGYRWS 236 >UniRef50_UPI000050FA0F putative two-component system response regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FA0F Length = 338 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L E P + SR ++ + G E R VDV I+R+RK + +I T+ G Sbjct: 277 VLLLLTEQPEHVYSREKIAFTVWGYEWAGDSRVVDVHIQRLRKKIGAN-----MIETVRG 331 Query: 61 EGYRFCG 67 GYRF G Sbjct: 332 FGYRFAG 338 >UniRef50_C7LSY9 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfovibrionales RepID=C7LSY9_DESBD Length = 231 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 F N GK+ SR +LL G E + + RTVD +RR+RK + + T+ G GYR Sbjct: 167 FVRNEGKVLSREQLLSNAWGYEFEGYSRTVDTHVRRLRKKLGPYA---DWLETVRGIGYR 223 Query: 65 FCGD 68 + Sbjct: 224 MKRE 227 >UniRef50_C0WM98 Possible response regulator n=3 Tax=Lactobacillus RepID=C0WM98_LACBU Length = 248 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + + SR ++ + G R +D I +RK E P P+++ TI G Sbjct: 172 LLFFISHSNTVLSRTQIASAVWGNTSGATLRIIDTHISNLRKKIEKQPKNPQMLKTIRGF 231 Query: 62 GYRFCGD 68 GY F + Sbjct: 232 GYLFKVE 238 >UniRef50_A4EGJ5 Two component transcriptional regulator, winged helix family protein n=4 Tax=Rhodobacteraceae RepID=A4EGJ5_9RHOB Length = 236 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 35/71 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +P ++ R ++L + +DR++DV + R+R II T++G Sbjct: 165 ILKMFLASPNRLIKREQILDYLGSSADDAYDRSIDVKVSRLRTKLGDDAQNARIIKTVYG 224 Query: 61 EGYRFCGDLED 71 GY F ++++ Sbjct: 225 AGYIFIAEVKE 235 >UniRef50_A0LPJ2 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=A0LPJ2_SYNFM Length = 263 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +RAE+L+ + G P V+V I R+R+ E P+ P ++ T Sbjct: 190 LEYLMRNKGRVVTRAEILENVWGYNFVPATNVVEVHICRLREKLER-PNKPRLLQTFRKA 248 Query: 62 GYRFCGD 68 GY D Sbjct: 249 GYALVED 255 >UniRef50_UPI0001C31E43 two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31E43 Length = 251 Score = 89.8 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++++R ELL+ + G R +DV +R +R+ E PD+P I T+ G Sbjct: 185 LEALMADPGRLRNRQELLRAIWGDSAYRDPRAIDVHVRHLREKLEPEPDSPRHIVTVRGA 244 Query: 62 GYRFCG 67 GYR Sbjct: 245 GYRLQA 250 >UniRef50_C4KB06 Two component transcriptional regulator, winged helix family n=18 Tax=Bacteria RepID=C4KB06_THASP Length = 242 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 42/69 (60%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + G++ SR +L+ + RE P+DRTVDV + R+R+ + P P +I T HG Sbjct: 174 LMALLSHAGQVLSRDQLMDAIHDREWTPNDRTVDVLVGRVRRKLDDNPADPRLILTAHGA 233 Query: 62 GYRFCGDLE 70 GY F G+L+ Sbjct: 234 GYLFAGELD 242 >UniRef50_C7H8D4 Two-component response regulator n=12 Tax=Bacteria RepID=C7H8D4_9FIRM Length = 299 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ N G SR ++L+K+ + DRTVD ++ +R IAT+ G Sbjct: 233 LVFLASNKGIALSREKILQKVWNYDYFGEDRTVDTHVKMLR---GHLGKCRGYIATVWGI 289 Query: 62 GYRFCGD 68 GY+F D Sbjct: 290 GYKFDPD 296 >UniRef50_B8DS40 Two component transcriptional regulator, winged helix family n=29 Tax=Proteobacteria RepID=B8DS40_DESVM Length = 275 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + P ++ SR +LL GR + DR++DV + R+R P+II T+ G+ Sbjct: 173 LRFFLKYPNRVMSRDQLLDLTQGRAAEAFDRSIDVLVSRLRTRLRDNGREPQIIKTVRGD 232 Query: 62 GYRFCGDLE 70 GY D+E Sbjct: 233 GYYLATDVE 241 >UniRef50_A1SYE4 Two component transcriptional regulator, winged helix family protein n=4 Tax=Proteobacteria RepID=A1SYE4_PSYIN Length = 246 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ SR +LL+ + G E DRTVDV I R+R+ E +P I T G Sbjct: 174 LESLATRPKRVISREQLLEYLRGAEGDTFDRTVDVLISRLRQKLEINSRSPRYIRTERGI 233 Query: 62 GYRFCGDL 69 GY F ++ Sbjct: 234 GYSFSENV 241 >UniRef50_A7GEN9 DNA-binding response regulator n=18 Tax=Firmicutes RepID=A7GEN9_CLOBL Length = 229 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S+ ++ +K+ G + + TV I++IR F + IAT+ G Sbjct: 160 IVELLALHPEQVFSKEQIYEKVWGYDAEGDANTVAEHIKKIRAKFIKRNASLNHIATVWG 219 Query: 61 EGYRFC 66 GYR+ Sbjct: 220 VGYRWE 225 >UniRef50_A6G9H9 Two-component response regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9H9_9DELT Length = 230 Score = 89.8 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ENP ++ SR EL +K+ + P+ R VD I R+RKH E +P P ++ G Sbjct: 164 LRYFIENPNRVLSRQELQEKVWKLDNYPNSRMVDNFILRLRKHLEPSPKEPRYFVSVRGA 223 Query: 62 GYRFCGD 68 GY+F + Sbjct: 224 GYKFVPE 230 >UniRef50_Q0IC97 DNA-binding response regulator n=3 Tax=Synechococcus RepID=Q0IC97_SYNS3 Length = 240 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + SR +L++ + G + + VDV +R +RK E+ + +I T+ G Sbjct: 173 LDCFMRHPRQALSRGQLIQHVWGDDYFGDENVVDVFVRYLRKKLEA-GGSERVIQTVRGV 231 Query: 62 GYRFC 66 G+ Sbjct: 232 GFALR 236 >UniRef50_C3RMH7 Signal transduction regulator n=8 Tax=Bacteria RepID=C3RMH7_9MOLU Length = 229 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N ++ R ELL ++ G + R +DV IR +R + I TI Sbjct: 160 LVYLMDNKHRVVEREELLNEIWGYDFIGESRALDVHIRALRSKLNDDG--HKYIKTIRSV 217 Query: 62 GYRFCGDLE 70 GYRF + + Sbjct: 218 GYRFYEEGD 226 >UniRef50_A9G298 Two-component response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G298_SORC5 Length = 241 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L E G++ SR ++ K+ G RT+D I ++R E TP + T+ G Sbjct: 175 VLLCLAEAGGRVLSREQIQAKVWGPTHHGTPRTIDNFILQLRNKLEENATTPRHLLTVRG 234 Query: 61 EGYRFCG 67 GYRF Sbjct: 235 VGYRFVP 241 >UniRef50_A8GAJ9 Two component transcriptional regulator, winged helix family n=54 Tax=Gammaproteobacteria RepID=A8GAJ9_SERP5 Length = 246 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 38/68 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++ K+ +R LL+ L+ DRT+DV I R+R+ E P PE+I TI G Sbjct: 172 LLALVQHARKVLTRDRLLELTHSETLEVFDRTIDVLIMRLRRKIEINPHQPELIRTIRGL 231 Query: 62 GYRFCGDL 69 GY F D+ Sbjct: 232 GYVFAADV 239 >UniRef50_Q04VZ3 Response regulator n=6 Tax=Leptospira RepID=Q04VZ3_LEPBJ Length = 234 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NPG +R +LL ++ G+++ DR VDV I+R+R E + TI G Sbjct: 170 ILNLFMTNPGVAFTRDKLLDRVWGKDIYVTDRAVDVNIKRLRDKLGD---EKERLETIRG 226 Query: 61 EGYRFC 66 GYRF Sbjct: 227 IGYRFN 232 >UniRef50_A8ZSJ7 Two component transcriptional regulator, winged helix family n=9 Tax=Bacteria RepID=A8ZSJ7_DESOH Length = 233 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG + +R +++ K+ G DR+VDV I +RK E E I T+ G Sbjct: 167 ILSFLASRPGLVFTRWQIVDKIRGEHYAVTDRSVDVLISGLRKKLEDYG---EYIETVRG 223 Query: 61 EGYRFCGDLED 71 GYRF ++E+ Sbjct: 224 VGYRFR-EIEE 233 >UniRef50_C1ZG07 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZG07_PLALI Length = 264 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +F E+ G++ SR +L + + RT+D + R+RK E P P I ++ G G Sbjct: 186 KYFIEHQGEVLSRTRILNHVWDEHAEVTTRTIDNFVLRLRKLIEPDPSKPVHILSVRGTG 245 Query: 63 YRFCG 67 YRF Sbjct: 246 YRFLP 250 >UniRef50_Q3A7S2 Putative two component response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7S2_PELCD Length = 242 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G + SR ++ + RE DR+VD+ I R+RK P P ++ TI G+ Sbjct: 177 LWYLASHAGIVVSRNDIHLALYNREYNGIDRSVDMYISRLRKKLGDCPAHPTLLKTIRGD 236 Query: 62 GYRFCG 67 GY F G Sbjct: 237 GYLFVG 242 >UniRef50_C1XS75 Two component transcriptional regulator, winged helix family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS75_9DEIN Length = 219 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NPG+I +R E+L+++ G + +DV ++ +RK +I T+ G Sbjct: 157 VLELFVINPGRIFTREEVLERVWGPGFESDSNLIDVYVKNLRKKLYDN-----VIETVRG 211 Query: 61 EGYRFC 66 GYRF Sbjct: 212 LGYRFA 217 >UniRef50_C6D0P6 Two component transcriptional regulator, winged helix family n=9 Tax=Bacillales RepID=C6D0P6_PAESJ Length = 216 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + +N G+I R LL ++ G + DRTVD IRR+R+ I T G G Sbjct: 153 KYLIQNKGQIVPRKMLLDQVWGFDYYGDDRTVDTHIRRLREKIGE-----TRIKTFRGLG 207 Query: 63 YRFCGDLED 71 Y ++ Sbjct: 208 YSLEEHPDE 216 >UniRef50_B8G7R1 Two component transcriptional regulator, winged helix family n=3 Tax=Chloroflexus RepID=B8G7R1_CHLAD Length = 234 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ N ++ SR +L++K+ G + DR VDV + ++R+ E+ +I T G Sbjct: 161 LIALARNHNRVLSREDLIEKVWGADFYGTDRVVDVYVSQVRRKIEALTGE-NLIRTARGV 219 Query: 62 GYRFC 66 GYRF Sbjct: 220 GYRFV 224 >UniRef50_B7JEB2 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=9 Tax=Bacillus cereus group RepID=B7JEB2_BACC0 Length = 220 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ +N G+ S +L ++ G + TV I+ +R II T+ G Sbjct: 157 ILMLLVQNNGRTLSHEVILSRVWGYDFDGDGSTVHTHIKNLRAKLPDN-----IIKTVRG 211 Query: 61 EGYRFC 66 GYR Sbjct: 212 VGYRLE 217 >UniRef50_B0C620 Two component transcriptional regulator, winged helix family n=19 Tax=Bacteria RepID=B0C620_ACAM1 Length = 226 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 1 AM-LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P ++ S+ +LL ++ G + P ++V IR +R+ F + I T+ Sbjct: 161 ILAEVLLRHPMQVMSKEQLLNRVWGYDYDPGSNIIEVYIRHLRRKFG-----SQYIETVR 215 Query: 60 GEGYRFCG 67 G GYR Sbjct: 216 GMGYRLNS 223 >UniRef50_B8JG70 Two component transcriptional regulator, winged helix family n=2 Tax=Cystobacterineae RepID=B8JG70_ANAD2 Length = 238 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G++ +R +LL G + DR++D I R+R P P ++ T+ G Sbjct: 168 LRVLAERAGRVLTREQLLDLTKGSADEAFDRSIDAHISRLRHKLGDDPRRPALLKTVRGA 227 Query: 62 GYRFCGDLE 70 GY E Sbjct: 228 GYVLAAGPE 236 >UniRef50_Q3KAS5 Two-component system, response regulator n=2 Tax=Proteobacteria RepID=Q3KAS5_PSEPF Length = 235 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + GKI SR ++L +M G +R+VDV I ++R + P P I T+ G+ Sbjct: 165 LWLLASAAGKILSRDDILNRMRGIAFDGLNRSVDVYISKLRNKLKDNPREPVCIKTVWGK 224 Query: 62 GYRFCG 67 GY F Sbjct: 225 GYLFNP 230 >UniRef50_C4Z7A3 Two-component system, OmpR family, response regulator n=2 Tax=Eubacterium RepID=C4Z7A3_EUBE2 Length = 261 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP ++ S+ ++ + +T+DV I IRK ++ E I TI G Sbjct: 196 ILELLLKNPKQVFSKEDIFEYAWDEPYMGETKTLDVHISNIRKKIKTVTPD-EYIETIWG 254 Query: 61 EGYRF 65 GYR Sbjct: 255 IGYRL 259 >UniRef50_A1U3N6 Two component transcriptional regulator, winged helix family n=3 Tax=Gammaproteobacteria RepID=A1U3N6_MARAV Length = 242 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L +N G++ +R LL+++ G + RTVD + R+R+ P+ I TI+ G Sbjct: 161 LFLFQNQGRLLTREMLLERVWGLTRDINTRTVDTHMSRLRRRLGLNPENGFRIKTIYQRG 220 Query: 63 YRFCG 67 YR Sbjct: 221 YRLEA 225 >UniRef50_A4SZ97 Two component transcriptional regulator, winged helix family n=3 Tax=cellular organisms RepID=A4SZ97_POLSQ Length = 237 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SRA LL K+ G E+ +RTVDV I+R+R I T+ G Sbjct: 168 LQFFMANPERVHSRASLLDKVWGSEVYIEERTVDVHIKRLRAALVPFDCD-RYIETVRGS 226 Query: 62 GYR 64 GYR Sbjct: 227 GYR 229 >UniRef50_C1I3L5 Alkaline phosphatase synthesis transcriptional regulatory protein phoP n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3L5_9CLOT Length = 227 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N K+ SR +L+ + RTVD+ IRRIR T P +I T+ G Sbjct: 164 LEFFVQNRNKVFSREQLIDNIWEFSYDGDIRTVDIHIRRIRSKL-DTNGHPSVIETVFGV 222 Query: 62 GYRFC 66 GY Sbjct: 223 GYMMR 227 >UniRef50_C0BXI5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0BXI5_9CLOT Length = 237 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P ++ + ++ + + + R V+ + +RK + PD P+ I ++H Sbjct: 170 ILALLISHPRRVFTYEMIMDLVWKEDYTYYSRKAVNNHVSNLRKKLKVAPDVPDYIKSVH 229 Query: 60 GEGYRFCG 67 GY+F Sbjct: 230 SVGYKFMP 237 >UniRef50_Q3K1Z3 DNA-binding response regulator n=9 Tax=Bacteria RepID=Q3K1Z3_STRA1 Length = 234 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG+I ++ +L +K+ GR L+ + T+ V I IR E P+ I T+ G Sbjct: 163 ILHILMSSPGRIYTKTQLYEKINGRYLEGDETTIMVHISNIRDKIEDDSKYPKYIKTLRG 222 Query: 61 EGYRFCGD 68 GY+ Sbjct: 223 VGYKIEKP 230 >UniRef50_C9XMT9 Two-component response regulator n=94 Tax=Bacteria RepID=C9XMT9_CLODC Length = 238 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S E+ +++ D TV V +R IR+ E P P+ + + G Sbjct: 172 ILSLLMRNAGRVFSADEIYERVWNENAINTD-TVMVHVRNIREKIEIDPKNPKYLKVVWG 230 Query: 61 EGYRFCG 67 GY+ Sbjct: 231 VGYKIEK 237 >UniRef50_B9E984 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E984_MACCJ Length = 223 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + K+ +R +L++++ G + +RTVDV ++RIRK D+ I T+ G Sbjct: 158 LYYLVRHYPKVATREQLIEEIWGYDFDGDERTVDVHVKRIRKRL-DAFDSGVEIQTVRGV 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_C7I0A5 Two component transcriptional regulator PhoB, winged helix family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0A5_THIIN Length = 244 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR LL K+ G + +RTVDV I+R+R+ E++ T+ G Sbjct: 170 LHYLMAHPERVHSRGALLDKVWGDHVFIEERTVDVHIKRLREALSPV-QCAEMVETVRGA 228 Query: 62 GYRFCGDLE 70 GYRF Sbjct: 229 GYRFTAQAR 237 >UniRef50_Q8ESP1 Two-component response regulator n=1 Tax=Oceanobacillus iheyensis RepID=Q8ESP1_OCEIH Length = 227 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ENP + SR ELL K+ G + DR VD I+RIRK + P + T+ G Sbjct: 164 LLLLAENPNRAFSREELLMKIWGNDYFGSDRAVDDLIKRIRKKMGNIP-----LETVWGF 218 Query: 62 GYRFCGDLE 70 GYR D E Sbjct: 219 GYRLRKDEE 227 >UniRef50_A0RK71 DNA-binding response regulator n=69 Tax=Bacillus cereus group RepID=A0RK71_BACAH Length = 232 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ + + +++ + TV V IR +RK ++I T+ G Sbjct: 166 ILYLLASHPKKVYNVENIFQQVWADDYFEGGNTVMVHIRTLRKKLGEDKRKNKLIKTVWG 225 Query: 61 EGYRFCG 67 GY F G Sbjct: 226 VGYTFNG 232 >UniRef50_C7IFX1 Two component transcriptional regulator, winged helix family n=5 Tax=Clostridiales RepID=C7IFX1_9CLOT Length = 217 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N SR LL+ + G + + RTVDV I+++RK E + I T++ Sbjct: 154 LEVLVNNRNIALSRERLLELVWGYDFEGDTRTVDVHIQKLRKKLE----WEDRIKTVYKL 209 Query: 62 GYRFC 66 GYR Sbjct: 210 GYRLE 214 >UniRef50_Q07HV3 Two component transcriptional regulator, winged helix family n=8 Tax=Proteobacteria RepID=Q07HV3_RHOP5 Length = 245 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F E P + +R +LL +GR + DRT+D + R+R+ E P P+II T+ Sbjct: 174 LVAFLERPRFVLTREQLLDITSGRSAEVFDRTIDNQVSRLRRKIEDDPAHPKIITTVRSG 233 Query: 62 GYRFCGDLED 71 GY D+ + Sbjct: 234 GYSLAADVRE 243 >UniRef50_A9AYH1 Two component transcriptional regulator, winged helix family n=2 Tax=Chloroflexi RepID=A9AYH1_HERA2 Length = 238 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG+ SR LL + G+ DR+VD + R+RK D I T+ G Sbjct: 171 ILDLLLRNPGRAFSRNYLLDTIWGQSYVGGDRSVDNAMLRLRKKLADFGDA---IETVWG 227 Query: 61 EGYRFCGD 68 GYR + Sbjct: 228 LGYRLQAE 235 >UniRef50_Q1LHM7 Two component transcriptional regulator, winged helix family n=25 Tax=Proteobacteria RepID=Q1LHM7_RALME Length = 261 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F E+P ++ R L+ GR+L DR++D+ + R+R+ P +I T+ GE Sbjct: 192 LLTFIEHPNRVLDREMLINTARGRDLDVFDRSIDLLVSRLRQKLRDDPRDSALIRTVRGE 251 Query: 62 GYRFCGDLE 70 GY F G +E Sbjct: 252 GYVFTGTVE 260 >UniRef50_C9RLA0 Two component transcriptional regulator, winged helix family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLA0_FIBSS Length = 238 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATI 58 + +F + G++ R +LL+ + G E P RT+D I +R+ E P+II +I Sbjct: 170 ILKYFWQRRGEVVLREDLLQDLWGYTPENMPSTRTIDNHIVNLRRKLEDDQANPKIILSI 229 Query: 59 HGEGYRFCG 67 G GY+F Sbjct: 230 RGAGYKFDA 238 >UniRef50_B0CFF1 Two-component transcriptional regulator n=7 Tax=Cyanobacteria RepID=B0CFF1_ACAM1 Length = 235 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+P +I +R ++L+ + G + + ++V IR +R + P+ +I T+ G Sbjct: 170 LRYLMEHPREILTREQILENVWGFDFRGESNVIEVYIRYLRLKVQVAPEK-RLIHTVRGV 228 Query: 62 GYRFC 66 GY Sbjct: 229 GYVLR 233 >UniRef50_B8I717 Two component transcriptional regulator, winged helix family n=7 Tax=Firmicutes RepID=B8I717_CLOCE Length = 228 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G++ +R +L+++ G E + V V +RR+R+ E P P+ I T+ G Sbjct: 158 LTLLTQNSGQVLTRDIILQRLWGTDEAFVDENAVSVNMRRLRQKIEDDPKNPKYIKTVFG 217 Query: 61 EGYRFCGD 68 GY + + Sbjct: 218 IGYTWGEE 225 >UniRef50_UPI0001C35F78 two-component response regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35F78 Length = 244 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 +L EN K + ++ + + + TV V IR +RK E P P I + Sbjct: 178 ILLLLAENRKKTYTTQDIYEAVWNEPFLFSSNNTVMVHIRNLRKKLEDDPQNPRCIRNVW 237 Query: 60 GEGYR 64 G+GYR Sbjct: 238 GKGYR 242 >UniRef50_A5N716 Transcriptional regulator n=15 Tax=Firmicutes RepID=A5N716_CLOK5 Length = 237 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ PGKI +R EL+ G+ K +DRT+D I+ +R E P PE I T+ G Sbjct: 170 ILITMIRYPGKIFTREELIIVTLGQNFKGYDRTIDSHIKNLRYKIEDNPKEPEYIVTMRG 229 Query: 61 EGYRF 65 GY+F Sbjct: 230 IGYKF 234 >UniRef50_P54443 Uncharacterized transcriptional regulatory protein yrkP n=4 Tax=Bacillus RepID=YRKP_BACSU Length = 231 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + KI S + + + G+ + TV V IR++R E P P I T Sbjct: 163 ILKLLMNKRNKIFSAQNIYESVWGQPYFYCSNNTVMVHIRKLRSKIEDDPARPVYIKTEW 222 Query: 60 GEGYRFCG 67 G GYRF Sbjct: 223 GRGYRFGA 230 >UniRef50_UPI0001B559F0 two-component system, response regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B559F0 Length = 247 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +AE+L+++ + R VD ++ +R+ P ++ T+ G Sbjct: 173 LACFLAHPERVLEKAEILQRVWRYDFSGDTRIVDTYVKNLRRKL-DHGGAPALLHTVRGV 231 Query: 62 GYRFCGDLED 71 GY ++ Sbjct: 232 GYCLRLPRDE 241 >UniRef50_A1B7Z0 Two component transcriptional regulator, winged helix family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B7Z0_PARDP Length = 255 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG++ SR +LL R P+DR+VDV I +IR+ P I TI G Sbjct: 188 LSVLAQRPGRVLSRDQLLDLTVSRHWSPYDRSVDVMIGKIRRKIGDNGPEPRRIRTIRGT 247 Query: 62 GYRFCGDL 69 GY F + Sbjct: 248 GYMFSPEP 255 >UniRef50_P45189 Phosphate regulon transcriptional regulatory protein phoB n=18 Tax=Pasteurellaceae RepID=PHOB_HAEIN Length = 231 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P K+ SR +LL ++ +L+ RTVD IRR+R++ I T+ G Sbjct: 161 LHFFMRHPEKVYSREQLLNRIWHNDLEVEYRTVDSYIRRLRRNLAPFQCE-HYIQTVRGS 219 Query: 62 GYRFCGDLED 71 GYRF L D Sbjct: 220 GYRFSSYLRD 229 >UniRef50_B6BN62 Two-component system response regulator n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BN62_9PROT Length = 230 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N G + SR ++L + G DR++DV I R+R P P+ ++ G Sbjct: 162 VLKLFLLNRGIVFSREQILDSVEGMNWSSGDRSIDVIISRLRTKLNDNPRDPKYFESVRG 221 Query: 61 EGYRF 65 GYR Sbjct: 222 IGYRM 226 >UniRef50_A5VEY8 Two component transcriptional regulator, winged helix family n=7 Tax=Proteobacteria RepID=A5VEY8_SPHWW Length = 225 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ +R+ LL+ + P +D + R+R+ + DTP +I T+ G Sbjct: 158 ILEYLVRSAGRVVTRSMLLEHVWDYNFDPQTNIIDQHVSRLRQKLDRGFDTP-LIETVRG 216 Query: 61 EGY 63 GY Sbjct: 217 TGY 219 >UniRef50_O34903 Uncharacterized transcriptional regulatory protein ykoG n=5 Tax=Bacillales RepID=YKOG_BACSU Length = 228 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ ++P ++ +R ++L + G + VDV IR IRK P ++I TI G Sbjct: 164 LVYMLKHPQQVLTREQILSSVWGFDYIGDTNVVDVYIRYIRKKL-DYPYEKQLIHTIRGV 222 Query: 62 GY 63 GY Sbjct: 223 GY 224 >UniRef50_C5ENX8 Two-component response regulator n=2 Tax=Clostridiales RepID=C5ENX8_9FIRM Length = 233 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F N I +R +LL + G + + RTVD IRR+R+ E I T G Sbjct: 170 LRYFLNNQRIILTREQLLNHVWGMDFEGDSRTVDTHIRRLRRKIGE-----EYIKTRIGI 224 Query: 62 GY 63 GY Sbjct: 225 GY 226 >UniRef50_C9YCY7 Transcriptional regulatory protein ompR n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCY7_9BURK Length = 248 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 39/68 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+ G+ RA L+++ GR+L P DR++DV + R+R+ P +I T+ G Sbjct: 175 LRFFAEHAGETLDRARLMEQTRGRDLGPLDRSLDVQVSRLRQRLHDDGKQPVLIKTVRGS 234 Query: 62 GYRFCGDL 69 GY F D+ Sbjct: 235 GYVFSADV 242 >UniRef50_Q2T1W7 DNA-binding response regulator n=22 Tax=Proteobacteria RepID=Q2T1W7_BURTA Length = 272 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G+ +R L + + G P +DV + R+RK + TP +I T+ G Sbjct: 208 VLEFMMRHAGQTITRMMLFEAVWGYHFDPGTNLIDVHMGRLRKKIDPPDATP-MIRTVRG 266 Query: 61 EGYRFC 66 GY Sbjct: 267 AGYILS 272 >UniRef50_B8H4H9 Two-component response regulator protein n=9 Tax=Proteobacteria RepID=B8H4H9_CAUCN Length = 242 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR +L + G + P VDV +RR+R P I T+ G Sbjct: 169 LELFLSSPGRVLSRERILSNVWGVDEDPLTNVVDVYVRRLRAKI-DPPLASSFITTVRGL 227 Query: 62 GYRFCGDL 69 GYR D Sbjct: 228 GYRLEPDP 235 >UniRef50_Q2SHD7 Probable transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHD7_HAHCH Length = 487 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 37/69 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ENPG+ SR L++K+ ++ ++ I ++RK F + + PE I TI Sbjct: 39 VLLALAENPGRTVSRETLIQKVWNENEYVGEQALNTAIWQLRKAFNDSSEAPEYIETIPK 98 Query: 61 EGYRFCGDL 69 +GYR ++ Sbjct: 99 KGYRLLKEV 107 >UniRef50_Q02BS1 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02BS1_SOLUE Length = 129 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ G+I R LL ++ G + RT+DV +RR+RK + I TI G Sbjct: 46 LALLVQHAGEIIPREALLMQVWGYGAEIRTRTLDVHVRRLRKKLG--GYADQYIETIFGI 103 Query: 62 GYRFCG 67 GYRF Sbjct: 104 GYRFQP 109 >UniRef50_C2V3X6 Two component transcriptional regulator, winged helix n=4 Tax=Bacillus cereus RepID=C2V3X6_BACCE Length = 233 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 39/68 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN K SR ELL K+ G + + +DV I R+R+ E++P PE + T+ G Sbjct: 162 ILRYLMENSMKPISRNELLNKIWGINCVGNTKVIDVNINRLRQKIETSPSNPEFLLTVRG 221 Query: 61 EGYRFCGD 68 +GYR+ + Sbjct: 222 KGYRWNEN 229 >UniRef50_Q1GXN5 Two component transcriptional regulator, winged helix family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXN5_METFK Length = 241 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+P + SR L++ + G+E DR++DV I R+R H E+ P II T+ Sbjct: 169 VLRALLEHPNRPLSRDFLVEHVYGKESHAMDRSIDVCISRLRHHIEADTRNPTIIRTVRN 228 Query: 61 EGYRFCGDLE 70 GY ++ Sbjct: 229 AGYMLASQVK 238 >UniRef50_C6NV64 Two component transcriptional regulator, winged helix family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NV64_9GAMM Length = 247 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 36/70 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + P + SR LL+ + G + DR++DV + R+RK E P P + T G Sbjct: 160 LLVFAQRPNRALSRDHLLQALGGDDDGRFDRSIDVRVTRLRKLIEENPRQPRFLRTERGV 219 Query: 62 GYRFCGDLED 71 GYRF + Sbjct: 220 GYRFVPRENE 229 >UniRef50_Q0ASG1 Two component transcriptional regulator, winged helix family n=15 Tax=Proteobacteria RepID=Q0ASG1_MARMM Length = 229 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ SR +LL + G ++ RTVDV + R+RK + + I T+ Sbjct: 163 LDYLMQHPGRVFSREQLLDAVWGSDVYVEARTVDVHVGRLRKALN-NKEERDPIRTVRSA 221 Query: 62 GYRFC 66 GY F Sbjct: 222 GYAFD 226 >UniRef50_C2D6V6 Possible response regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6V6_9ACTN Length = 238 Score = 88.3 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ SR +LL ++ G E RTVDV IRR+R P IAT+ G Sbjct: 175 LSFLVTHPGRAYSREKLLHQVWGFEYCGGTRTVDVHIRRVRSKVG--PQIASHIATVRGV 232 Query: 62 GYRF 65 GY F Sbjct: 233 GYLF 236 >UniRef50_A5G0J5 Two component transcriptional regulator, winged helix family n=36 Tax=Proteobacteria RepID=A5G0J5_ACICJ Length = 262 Score = 88.3 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + P ++ +R LL + GR+ P DR +DV I R+R+ E +II T+ G Sbjct: 192 LLALLDRPNRVLTRDMLLDLLRGRQAGPFDRAIDVAISRLRRKLEDDGRHAQIIKTVRGG 251 Query: 62 GYRFCGDLE 70 GY +E Sbjct: 252 GYVLAVPVE 260 >UniRef50_B2IIX2 Two component transcriptional regulator, winged helix family n=3 Tax=Proteobacteria RepID=B2IIX2_BEII9 Length = 237 Score = 88.3 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F E+ ++ +R +LL G DR++DV + R+R E P P +I T+ Sbjct: 167 LLAFAEHSQRVLTRDQLLDLARGLSHAAFDRSIDVQVSRLRHKLEDDPKKPSVIRTVRNG 226 Query: 62 GYRFCGDL 69 GY F + Sbjct: 227 GYIFTPVV 234 >UniRef50_C9XRL7 Two-component response regulator n=4 Tax=Clostridium difficile RepID=C9XRL7_CLODC Length = 225 Score = 88.3 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L EN ++ S+ E+ ++ TV V I ++RK S + I T+ G Sbjct: 159 ILLFLAENKEQVFSKIEIYNQVWKMPDIGDQHTVQVHIAQMRKKINSLSREHQYIQTVWG 218 Query: 61 EGYRFCG 67 +GY+F Sbjct: 219 KGYKFVP 225 >UniRef50_B8DZ94 Two component transcriptional regulator, winged helix family n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8DZ94_DICTD Length = 224 Score = 88.3 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N +I S+ +++ + G E V+ I+ +RK E II TI G Sbjct: 159 ILEYLMRNVNRIISKEQIISHVWGYESDTLSNVVEAHIKNLRKKLER-KRDENIIETIRG 217 Query: 61 EGYR 64 GYR Sbjct: 218 MGYR 221 >UniRef50_A3CKZ7 Two-component response transcriptional regulator (CheY-like receiver and winged-helix DNA-binding domains), putative n=7 Tax=Firmicutes RepID=A3CKZ7_STRSV Length = 226 Score = 88.3 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 30/68 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P KI ++ EL +++ P D T++ + +RK T E I T+ G Sbjct: 159 ILQLLLRHPKKIYTKEELFEQVWEESYLPGDNTLNTHLSNLRKKLAQLDPTEEYIETVWG 218 Query: 61 EGYRFCGD 68 G R D Sbjct: 219 LGVRLKED 226 >UniRef50_D2MMT6 Putative regulatory protein VanR n=1 Tax=Bulleidia extructa W1219 RepID=D2MMT6_9FIRM Length = 232 Score = 88.3 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +NP K+ + ++ +++ E + T+ V IR +R+ E P P I + G Sbjct: 162 ILKYFIQNPKKLLTSQDIYQEVWKEEPIGSESTIAVHIRHLREKIEIDPSHPRYIKVVWG 221 Query: 61 EGYRFCGDLE 70 GY+ D E Sbjct: 222 RGYKAESDYE 231 >UniRef50_Q1GLX1 Two component transcriptional regulator, winged helix family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GLX1_SILST Length = 238 Score = 88.3 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 38/65 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N G++ +R +LL++ R + DR++D+ I R+R+ E P PE I T+ G Sbjct: 174 LRVFAQNRGRVLNRDQLLEQAHDRGWEHFDRSIDLRISRLRRKIEQNPTKPETIRTVRGI 233 Query: 62 GYRFC 66 GY F Sbjct: 234 GYIFD 238 >UniRef50_A0L7S7 Two component transcriptional regulator, winged helix family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7S7_MAGSM Length = 250 Score = 88.3 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR ++L G++ +P RT+D+ + R+RK P +I T+ Sbjct: 170 LRVFLHHPNRVLSRDQILDLTYGKDQEPFGRTIDMQVSRLRKRLVDNAKDPSLIKTVRNA 229 Query: 62 GYRFCGDL 69 GY FC + Sbjct: 230 GYVFCSRV 237 >UniRef50_C7NK44 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NK44_KYTSD Length = 261 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +PG++ +R ELL+ + RTVDV +RR+R P+ +I T+ Sbjct: 196 LAHLATHPGRVFTREELLEDLWEGTRLSGTRTVDVHVRRLRSKLG--PEHEGLIVTVRNV 253 Query: 62 GYRFCG 67 GYR Sbjct: 254 GYRMEA 259 >UniRef50_B4WSE4 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WSE4_9SYNE Length = 243 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 3 LHFCENPGKIQSRAELLKKMTGRE--LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 PG I SR ++L+ + G + +TVDV I R+R T P+ I TI G Sbjct: 175 ELLASRPGHIFSRGDILEALWGYDANSAADTKTVDVHISRLRIKLNETTHNPKYIVTIRG 234 Query: 61 EGYRF 65 GY F Sbjct: 235 RGYMF 239 >UniRef50_B8FQL7 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQL7_DESHD Length = 234 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + S L +++ G P + TV V IR +R+ E+ P P+ I T+ G Sbjct: 169 LAFLVRNRGTVFSVQNLYEQLLGESYLPSANNTVMVHIRNLRQKIEADPQHPKYILTVWG 228 Query: 61 EGYRFC 66 EGY+F Sbjct: 229 EGYKFA 234 >UniRef50_B7CCX3 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCX3_9FIRM Length = 228 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G+ SR EL+ ++ G + RT+DV I +RK + I ++ Sbjct: 160 LKYLAKNEGRAVSREELINQIWGYDFIGESRTLDVHINSLRKKLGNEYAH--WIQSVRQV 217 Query: 62 GYRFCGDLED 71 GYR D Sbjct: 218 GYRLVSGDND 227 >UniRef50_O78428 Probable transcriptional regulator ycf27 n=18 Tax=cellular organisms RepID=YCF27_GUITH Length = 254 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + G+ SRA++L+++ G E R VDV I R+R E+ P P++I T Sbjct: 178 LELLISRSGQPFSRADILQEVWGYTPERHVDTRVVDVHISRLRAKLETDPSNPDLILTAR 237 Query: 60 GEGYRF 65 G GY F Sbjct: 238 GTGYLF 243 >UniRef50_C6CWW2 Two component transcriptional regulator, winged helix family n=2 Tax=Paenibacillus RepID=C6CWW2_PAESJ Length = 239 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ + PG + +R +L+ + G + RTVDV + +RK E I +I G Sbjct: 166 VLLYLVQRPGMVITRDDLMNVVWGFDYIGGQRTVDVHVSSLRKKLEL--GQSVQIESIRG 223 Query: 61 EGYRFC 66 GY+ Sbjct: 224 VGYKLV 229 >UniRef50_A0RCN7 Two-component response regulator n=65 Tax=Bacillus RepID=A0RCN7_BACAH Length = 247 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ + E+ + + + TV V I R+R E P P+ I + G Sbjct: 181 ILYLMAAAENRVFTIEEIYESVWKERAYESNNTVMVHIARLRNKIEENPKEPKFIQNVWG 240 Query: 61 EGYRFC 66 GY+ Sbjct: 241 VGYKIE 246 >UniRef50_A9BP07 Two component transcriptional regulator, winged helix family n=14 Tax=cellular organisms RepID=A9BP07_DELAS Length = 239 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG+I SR LL + G++ DRTVD ++ +R + + I T G Sbjct: 172 LRCLLERPGRILSREFLLDSIWGQDSDSTDRTVDTHVKTLRAKLRAQAPQQDFITTHRGM 231 Query: 62 GYRFC 66 GY Sbjct: 232 GYSLT 236 >UniRef50_A5UWJ8 Two component transcriptional regulator, winged helix family n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UWJ8_ROSS1 Length = 231 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ ++ LL+ + + P TV V I +R+ T I T+ G Sbjct: 157 ILSYLMRHQGEVITQEMLLEHVWDGTVNPFTNTVRVHINALRRKLRDTIAPYRYIETVVG 216 Query: 61 EGYRF 65 GYR Sbjct: 217 VGYRL 221 >UniRef50_Q0F0D6 Response regulator in two-component regulatory system with PhoR (Or CreC), regulates pho regulon (OmpR family) protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0D6_9PROT Length = 254 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PGK +SR LL + G ++ RTVDVT++R+RK + + T+ G Sbjct: 185 LQMLMKKPGKTRSRDYLLDHVWGNDVYVEPRTVDVTVKRLRKALKELGRK-NCVETVRGM 243 Query: 62 GYRFCGDLE 70 GYRF E Sbjct: 244 GYRFLPPSE 252 >UniRef50_Q6F7B5 Two-component response regulator n=55 Tax=Bacteria RepID=Q6F7B5_ACIAD Length = 254 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++P + +R +L+ GRE +R++DV + R+R+ E P I T+ G Sbjct: 184 VLKALVQHPREPLTRDKLMNLARGREWGAMERSIDVQVSRLRRLIEDNPARARYIQTVWG 243 Query: 61 EGYRFCGD 68 GY F D Sbjct: 244 IGYVFVPD 251 >UniRef50_A6TT79 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiales RepID=A6TT79_ALKMQ Length = 232 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N GK+ SR EL+ K+ G + +DRT+DV I+ +R E + + I T++G Sbjct: 166 LSIFIQNSGKVFSRDELVVKVLGYDYVGYDRTIDVHIKNLRHKIE--CEYYKYIVTVYGV 223 Query: 62 GYRFCG 67 GYRF Sbjct: 224 GYRFVK 229 >UniRef50_C3RJ29 Response regulator gtcR n=2 Tax=Bacteria RepID=C3RJ29_9MOLU Length = 226 Score = 88.3 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+P ++ ++ L + + E D T++V I +IR + E I T+ G Sbjct: 161 LKILLESPTRVFTKDILFEMVWDHEDSGDDNTLNVHISKIRSKLKQANPNQEYIETVWGI 220 Query: 62 GYR 64 GY+ Sbjct: 221 GYK 223 >UniRef50_Q3A190 Two component signal transduction response regulator n=4 Tax=Bacteria RepID=Q3A190_PELCD Length = 238 Score = 88.3 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + R LL G + + RT+D I ++RK E P P++I T+HG Sbjct: 168 LEAFYRHPDEALPRNTLLNLAWGIDYQGTTRTLDQHIAQLRKKIEPDPAAPQVIMTVHGI 227 Query: 62 GYRFCG 67 GYR+ Sbjct: 228 GYRYVA 233 >UniRef50_B1Y714 Two component transcriptional regulator, winged helix family n=2 Tax=Betaproteobacteria RepID=B1Y714_LEPCP Length = 265 Score = 88.3 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P +I R++LL ++ G + +R VD+ +RR+R+ E + +I TI G Sbjct: 164 LHFFMTHPDRILGRSQLLDQVWGDHVCVEERAVDIHVRRLRRALEPSG-HAALIETIRGM 222 Query: 62 GYRFCGDL 69 GYRF + Sbjct: 223 GYRFRREE 230 >UniRef50_A0LU58 Two component transcriptional regulator, winged helix family n=16 Tax=Bacteria RepID=A0LU58_ACIC1 Length = 240 Score = 88.3 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 29/69 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ + +LL + G + + V + ++R+ E P P + T G Sbjct: 158 ILDILARHAGRLVTTRQLLHDVWGPTYRNETHYLRVYMAQLRRKLEPDPAHPRYLRTEPG 217 Query: 61 EGYRFCGDL 69 GYR + Sbjct: 218 IGYRLVVEP 226 >UniRef50_C0Z5U8 Two-component response regulator n=3 Tax=Firmicutes RepID=C0Z5U8_BREBN Length = 261 Score = 87.9 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ ++PG + SR +LL+++ G + RT+DV I++IR+ + P I T+ G Sbjct: 196 LVQLVKSPGSVWSREQLLEQVWGFDYFGDVRTIDVHIKKIRQRLDKLPYD--CIQTVWGI 253 Query: 62 GYRFCGD 68 GY+F D Sbjct: 254 GYKFGVD 260 >UniRef50_B1QW07 Regulatory protein VanR n=6 Tax=Clostridiales RepID=B1QW07_CLOBU Length = 235 Score = 87.9 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + N KI S + + D + V I+ +RK E P P+ I T Sbjct: 169 ILELLALNRKKIFSMENIYSSIWNDSYIGASDNAIMVHIKNLRKKIEKNPKEPKYIKTSW 228 Query: 60 GEGY 63 G GY Sbjct: 229 GRGY 232 >UniRef50_A0YP32 Two-component response regulator n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YP32_9CYAN Length = 824 Score = 87.9 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ ++ +L+ + E +P++ TV I+R+R+ ++ +II T++G Sbjct: 158 LELFLRNPKRVLTQTAILEHLWSFESQPNEHTVRAHIKRLRRKLKTVNAD-KIIETVYGV 216 Query: 62 GYRFCG 67 GYR Sbjct: 217 GYRLKP 222 >UniRef50_B4U9Z2 Two component transcriptional regulator, winged helix family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9Z2_HYDS0 Length = 229 Score = 87.9 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN KI +R +++ + +DRTVDV I+ +R + I TI G Sbjct: 163 ILKYLLENIDKIMTRDKIINMLWSYGTDINDRTVDVHIKHLRDKLGDFG---KYIRTIRG 219 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 220 VGYKFSLKDE 229 >UniRef50_B2V706 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=B2V706_SULSY Length = 224 Score = 87.9 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ +R +L DRTVDV I RIRK P P+ I ++ G Sbjct: 159 LSMLIKNKGRVLTRDYILDNSIYLNYDSIDRTVDVIIGRIRKKIGDDPKNPKYIISVRGF 218 Query: 62 GYRFC 66 GY+F Sbjct: 219 GYKFE 223 >UniRef50_D2M1X4 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1X4_BACS4 Length = 225 Score = 87.9 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + SR L+K + E + T+ V + R+RK S P + I T+ G Sbjct: 160 ILAVLIRNRGNVVSRTRLMKALWDDESFVDENTLTVNVNRLRKKLASLPSDDDFIKTVKG 219 Query: 61 EGYRF 65 EGYR Sbjct: 220 EGYRL 224 >UniRef50_A6M0T3 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridium RepID=A6M0T3_CLOB8 Length = 228 Score = 87.9 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ N + SR ++L K+ G RT+D I+ +R + I TI G Sbjct: 160 LLYLVGNINTVLSREQILDKVWGYNFDGDIRTIDTHIKTLRAKLSEQG---DWIKTIRGS 216 Query: 62 GYRFCGD 68 GY F + Sbjct: 217 GYMFEVE 223 >UniRef50_C7PII2 Two component transcriptional regulator, winged helix family n=5 Tax=Sphingobacteriales RepID=C7PII2_CHIPD Length = 235 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G++ +R ++L+ + G + P RT+D I RK+FE ++ G Sbjct: 170 LKLLIENKGEVVTREKILQVVWGYNVYPTTRTIDNFILNFRKYFEEDSRNSRYFHSVRGV 229 Query: 62 GYRFC 66 GY+F Sbjct: 230 GYKFT 234 >UniRef50_C4Z2E0 Two-component system, OmpR family, phosphate regulon response regulator OmpR n=13 Tax=Bacteria RepID=C4Z2E0_EUBE2 Length = 229 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +NP +I SR ++L+ + E + T+ V IRR+R+ E P P I I G Sbjct: 159 LTFFLQNPKQILSRTQILENVFDLEGDFVDENTIAVNIRRLREKIEDNPAAPVYIKNIRG 218 Query: 61 EGYRFCGDLE 70 GY + ++ Sbjct: 219 LGYIWNQEVR 228 >UniRef50_A6TL65 Two component transcriptional regulator, winged helix family n=6 Tax=Bacteria RepID=A6TL65_ALKMQ Length = 240 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ N G++ R E+ + + G RT+DV ++ +R+ + +I T G Sbjct: 174 ILVLLIRNKGRVFGREEIFQLVWGEPCY-DTRTIDVHVKNLREKLKDIKTKGPMIETKWG 232 Query: 61 EGYRFCGD 68 GY F D Sbjct: 233 VGYYFRKD 240 >UniRef50_P0A5Z5 DNA-binding response regulator mtrA n=76 Tax=Bacteria RepID=MTRA_MYCBO Length = 225 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ +R LL+++ G R V+V ++R+R E P+ P ++ T+ G Sbjct: 159 LVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGV 218 Query: 62 GYR 64 GY+ Sbjct: 219 GYK 221 >UniRef50_B8HDW6 Two component transcriptional regulator, winged helix family n=21 Tax=Bacteria RepID=B8HDW6_ARTCA Length = 232 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F EN GK+ SR +LL ++ G + VDV + +R PE ++ G G Sbjct: 161 RVFVENSGKLLSREQLLSRVWGYDFDGSSNVVDVYVGYLRTKLG-----PEHFQSVRGAG 215 Query: 63 YRFCG 67 YRF Sbjct: 216 YRFTP 220 >UniRef50_Q5NY91 Response regulator n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY91_AZOSE Length = 236 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 35/69 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENP + SR +L R++ P DR+VD+ + R+RK E P+ P I T+ Sbjct: 168 LKALVENPNRALSRERILNLSQQRDMDPFDRSVDLRVMRLRKKIEPDPEHPRFIRTVRNA 227 Query: 62 GYRFCGDLE 70 GY F E Sbjct: 228 GYVFVPSGE 236 >UniRef50_A9KP45 Two component transcriptional regulator, winged helix family n=15 Tax=Bacteria RepID=A9KP45_CLOPH Length = 224 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F N G SR ++L + + RT+D ++++R + I TI G Sbjct: 161 LTYFITNRGVALSREKILNNVWNYDYFGDARTIDTHVKKLRSKMGDKG---DYIKTIWGM 217 Query: 62 GYRFC 66 GY+F Sbjct: 218 GYKFE 222 >UniRef50_D0WIB8 DNA-binding response regulator VicR n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WIB8_9ACTN Length = 244 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ ++ ++ ++ G E V V I ++R P IAT+ G Sbjct: 181 LSLFMSHPGRVFTKQQIFEEGWGEEYVASGNNVMVGISKLRAKLSDDPGA--YIATVRGL 238 Query: 62 GYRFCG 67 GYR Sbjct: 239 GYRMEA 244 >UniRef50_Q188S4 Putative lantibiotic resistance two-component response regulator n=6 Tax=Clostridium difficile RepID=Q188S4_CLOD6 Length = 230 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ SR ++ +K+ G + + TV +++IR F + E I+T+ G Sbjct: 163 IVELLALHAGQVFSREQIYEKVWGCDSEGDSSTVVERVKKIRAKFSAVTPEKEYISTVWG 222 Query: 61 EGYRFCG 67 GY++ Sbjct: 223 IGYKWNK 229 >UniRef50_A6CG62 Two-component response regulator n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CG62_9PLAN Length = 244 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F E+ G + +R+++L+ + G RT+D + R+RK E+ P P I ++ G Sbjct: 173 LKYFIEHEGMVLTRSQILEDVWGEQSAFVTTRTIDNFVLRLRKLVEANPAEPVHIVSVRG 232 Query: 61 EGYRFCGDL 69 GYRF + Sbjct: 233 AGYRFMPED 241 >UniRef50_Q251C7 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q251C7_DESHY Length = 231 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PGK+ +R +L+ + G+E + ++ V IRRIR+ E P P ++ T+ Sbjct: 165 IIALMANHPGKVFTREDLIDCIWGKEFETGSISIPVYIRRIREKIEQDPSEPTLLKTVWR 224 Query: 61 EGYRF 65 GY+ Sbjct: 225 FGYKL 229 >UniRef50_A9ASF4 Two component transcriptional regulator, winged helix family n=3 Tax=Burkholderia RepID=A9ASF4_BURM1 Length = 253 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ SR +LL+ + +DR++DV I R+R+ E P P I T+ G Sbjct: 172 LNAFLAAPGRVLSRDQLLESSRLYD-DVYDRSIDVQILRLRRKIEPDPSHPVFIRTVRGA 230 Query: 62 GYRFCGDL 69 GY + Sbjct: 231 GYVLDVPV 238 >UniRef50_D1CC84 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CC84_THET1 Length = 233 Score = 87.9 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N GK+ + LL ++ G E + + V I R+R+ + P+ P+ I T G Sbjct: 163 ILEQLVQNAGKVMTHQMLLNRVWGPEYTEENEYLRVYIGRLRRKLDPGPNGPKFIVTEQG 222 Query: 61 EGYRFC 66 GYRF Sbjct: 223 VGYRFV 228 >UniRef50_Q9KAM3 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9KAM3_BACHD Length = 231 Score = 87.9 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG+ +R +LL R+++ +DR VD I+ IR E +I T+ G Sbjct: 159 VLHRLLSNPGRTYTREQLLDLAWDRQVEIYDRNVDAHIKNIRDKLEKVGADSTVIQTVWG 218 Query: 61 EGYRFC 66 GY++ Sbjct: 219 VGYKYV 224 >UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GQ2_SACD2 Length = 425 Score = 87.9 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++ EN ++ SR EL +K+ T+ I+ RK + I T+ G Sbjct: 33 IIVYLIENRNRLVSRDELFEKIWDARAVSDT-TLSNHIKSARKALGDDGEQQHTIKTVRG 91 Query: 61 EGYRFCGDL 69 GY+F ++ Sbjct: 92 RGYQFIAEV 100 >UniRef50_Q4HSL5 Phosphate regulon response regulator PhoB n=3 Tax=Campylobacterales RepID=Q4HSL5_CAMUP Length = 224 Score = 87.9 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N ++ SR +LL+ + G RT+D+ I+ +R+ I TI G Sbjct: 160 LGFLLKNQNRVFSRDDLLEILWGYSYSGESRTIDIHIKTLRQKLGIAS---RFIKTIRGV 216 Query: 62 GYRFCGD 68 GY+ D Sbjct: 217 GYKISKD 223 >UniRef50_D2QGK1 Two component transcriptional regulator, winged helix family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGK1_9SPHI Length = 244 Score = 87.9 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK SR ++L + G ++ TV I R+R E P I T G Sbjct: 167 LTLLASYPGKSFSRQKILSLVWGYHHDGYEHTVTAHINRLRIKIEPDFTRPIYILTTWGI 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFA 231 >UniRef50_Q01N64 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q01N64_SOLUE Length = 245 Score = 87.9 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ GK SR +L+++ G R +D I R+R++ E P P + T+ G Sbjct: 174 LRYLIQHEGKPVSRKAMLEEVWGLHEDTDTRAIDNFIVRLRRYVEEEPTKPRHLLTVRGV 233 Query: 62 GYRFCG 67 GYRF Sbjct: 234 GYRFVA 239 >UniRef50_C6LEL9 DNA-binding response regulator RegX3 n=3 Tax=Clostridiales RepID=C6LEL9_9FIRM Length = 234 Score = 87.9 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F EN ++ + ++L ++ + T+ V IRR+R E P I T+HG Sbjct: 159 LKYFLENKNQVLLKEQILARVWDSGGSFVEENTLMVNIRRLRTKVEEDASHPRYIKTVHG 218 Query: 61 EGYRFC 66 GY + Sbjct: 219 MGYLWE 224 >UniRef50_Q189I8 Two-component response regulator n=5 Tax=Clostridiales RepID=Q189I8_CLOD6 Length = 229 Score = 87.9 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+ S+ +L + ++ ++ I R+R + I T+ G Sbjct: 162 IVKLLATNQGRAFSKEQLYNAIWKEPYYGNENVLNTHINRLRNKLSDGMEKNNYIKTLWG 221 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 222 IGYKMEEE 229 >UniRef50_B8FI17 Two component transcriptional regulator, winged helix family n=6 Tax=Proteobacteria RepID=B8FI17_DESAA Length = 229 Score = 87.9 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P ++ SR ELL G + + +DRT+D IR +RK + E I +I+G Sbjct: 162 ILKVMMSRPNRVFSRNELLDLAIGSQFEGYDRTIDSHIRNLRKKIKKALPDLECIHSIYG 221 Query: 61 EGYRFC 66 GY+F Sbjct: 222 AGYKFN 227 >UniRef50_A9KM61 Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM61_CLOPH Length = 224 Score = 87.9 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L+ ++P + ++ EL + G T++V IR++R+ E P+ PEII TI G G Sbjct: 161 LYLFQHPNIVITKDELFANVWGDAFFSDG-TLNVHIRKLREKIEKDPNNPEIIKTIWGTG 219 Query: 63 YRFC 66 YR Sbjct: 220 YRME 223 >UniRef50_A7BB43 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=A7BB43_9ACTO Length = 247 Score = 87.9 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R LL + G + R VD IR IR P P I T+ Sbjct: 178 LDYLMTHPGELHTRERLLSVLWGIDFASSTRAVDHRIREIRAALGEDPSDPVFIETVPSV 237 Query: 62 GYRFCGDL 69 GYRF G + Sbjct: 238 GYRFIGRV 245 >UniRef50_A6FSM2 Probable two-component response regulator protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSM2_9RHOB Length = 228 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 39/68 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR E+ + G+ P DRT+D + R+R+ + D P +I ++ G Sbjct: 142 LELFVRHPGRVLSRDEISLALRGQAWSPLDRTIDGHVARLRRKIDPGHDEPLLIRSVRGV 201 Query: 62 GYRFCGDL 69 GY F G++ Sbjct: 202 GYVFTGEV 209 >UniRef50_UPI0001C36ECD response regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36ECD Length = 226 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+ G+I + +L + G + TV V IR +R+ E P+ P+II T+ Sbjct: 159 LRTMMEHQGEIMDKNKLFDTVWGFDCFSEPSTVSVHIRWLREKIEDDPNEPKIIQTVWKA 218 Query: 62 GYRF 65 GYRF Sbjct: 219 GYRF 222 >UniRef50_B6FSP5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSP5_9CLOT Length = 226 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F EN G+I +R ++L + ++ T+ V I+R+R+ E P+ P+II T+ Sbjct: 159 ILALFFENKGRILTRGQILSGIWDESGNFVNNNTLTVYIKRLREKIEEDPNAPKIIKTVR 218 Query: 60 GEGYR 64 G GY+ Sbjct: 219 GMGYK 223 >UniRef50_C8PDN3 DNA-binding response regulator n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDN3_9LACO Length = 237 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ SR +LL+ + G E RT+D ++ +R+ E P +I T+ G Sbjct: 168 ILTILASSPTQVFSRKKLLELVWGNEYFGDARTIDTHVKTLRQKLEKVG--PHVIITVWG 225 Query: 61 EGYRFC 66 GY++ Sbjct: 226 VGYKYD 231 >UniRef50_D2LRZ5 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LRZ5_BACS4 Length = 236 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + ++PG++ SRA+LL+K+ + ++R++DV I+ +RK E P+ I T+ Sbjct: 161 IITIMAKHPGRVFSRADLLQKIQEDSFFEGYERSIDVHIKNLRKKLEVNTKQPKYILTVF 220 Query: 60 GEGYRFCGDLE 70 G GY+F G + Sbjct: 221 GMGYKFGGKRD 231 >UniRef50_Q52990 Phosphate regulon transcriptional regulatory protein phoB n=193 Tax=cellular organisms RepID=PHOB_RHIME Length = 227 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR++LL + G ++ +RTVDV + R+RK + P++I T+ G Sbjct: 163 LEFLMSSPGRVFSRSQLLDGVWGHDIYVDERTVDVHVGRLRKALN-FSNMPDVIRTVRGA 221 Query: 62 GYRFCG 67 GY Sbjct: 222 GYSLES 227 >UniRef50_C9RRV7 Two component transcriptional regulator, winged helix family n=16 Tax=Bacteria RepID=C9RRV7_FIBSS Length = 225 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG + SR ++L+K+ G + RTVD+ ++ +R+ + I+ T+ Sbjct: 164 LKLLMSRPGTVFSRQQILEKIWGVDFDMDTRTVDMHVKTLRQKLGAHGS---IVQTVRNV 220 Query: 62 GYR 64 GY+ Sbjct: 221 GYK 223 >UniRef50_C6BIK6 Two component transcriptional regulator, winged helix family n=9 Tax=cellular organisms RepID=C6BIK6_RALP1 Length = 280 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL ++ G + +RTVDV +R++R TP +I T+ G Sbjct: 168 LHFLVAHPQRVHSRTQLLDRVWGNHVFVGERTVDVHVRKLRVALAGTPCDG-LIQTVRGG 226 Query: 62 GYRFCG 67 GYR Sbjct: 227 GYRLVA 232 >UniRef50_Q03AM3 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=7 Tax=Lactobacillus RepID=Q03AM3_LACC3 Length = 215 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F NP +I +R +LL + RE D T+ VTI+R+R+ E P +I T+ G Sbjct: 149 LAYFFANPNQILARDQLLAALWDTREQFVADNTLTVTIKRLREKLEDDPAHTTLIRTVRG 208 Query: 61 EGY 63 GY Sbjct: 209 MGY 211 >UniRef50_B2JBG7 Two component transcriptional regulator, winged helix family n=3 Tax=Cyanobacteria RepID=B2JBG7_NOSP7 Length = 228 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +NP ++ +R+ +L K+ + + TV I +RK + + + I T++G Sbjct: 157 ILECFLKNPTQVLTRSAILDKLWEFDKLSGEETVKTHITNLRKKLRAVGSSEDFIETVYG 216 Query: 61 EGYRFCGDL 69 GYR C Sbjct: 217 IGYRLCPKE 225 >UniRef50_D0KWS3 Two component transcriptional regulator, winged helix family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWS3_HALNC Length = 262 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E P ++ +R +++ + G E DR++DV I R+R+ E+ P P + TI GE Sbjct: 178 LQFFMERPNRVINRDQIMDYLKGYERSAFDRSIDVRITRLRRKIETNPTEPRYLVTIWGE 237 Query: 62 GYRFCG 67 GY F Sbjct: 238 GYLFAP 243 >UniRef50_A6L7N3 Two-component system response regulator n=9 Tax=Bacteroides RepID=A6L7N3_BACV8 Length = 229 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +N G++ SR ++L K+ E+ DRT+DV I R+RK + I T G Sbjct: 165 ILLLLLQNKGRVFSREDILAKVWQEEVYVLDRTIDVNITRLRKKIGEYG---KCIVTRLG 221 Query: 61 EGYRFCGD 68 GY F + Sbjct: 222 YGYCFECE 229 >UniRef50_UPI0001C37170 two component transcriptional regulator, winged helix family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37170 Length = 262 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+ R +L ++ G + DR VD I+++RK S I T+ G Sbjct: 199 ILRYLMEHQDWTIDRDTILNRVWGYDYFGSDRVVDSHIKKLRKALGSAGKQ---IKTVVG 255 Query: 61 EGYRFCG 67 GYR Sbjct: 256 RGYRLSK 262 >UniRef50_C7H3P4 DNA-binding response regulator SrrA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3P4_9FIRM Length = 232 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ ++ + + + D ++V I +RK F + I T+ G Sbjct: 166 ILQLLMSSPSKVFTKNNIFESVWNENFVGDDNAINVHIGNLRKKFAKVNPEEKYIQTVWG 225 Query: 61 EGYRFCG 67 G++ G Sbjct: 226 LGFKMQG 232 >UniRef50_B1VIL1 Two-component system response regulator n=3 Tax=Corynebacterium RepID=B1VIL1_CORU7 Length = 256 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + S++++L + + V+ + +R+ P +I T+ G Sbjct: 190 LRYLMVNAEVVLSKSKILDHVWNYDFGGDGNVVESYVSYLRRKI--DTKEPRLIHTVRGV 247 Query: 62 GYRFCGD 68 GY Sbjct: 248 GYVLRKP 254 >UniRef50_A6WIX6 Two component transcriptional regulator, winged helix family n=3 Tax=Bacteria RepID=A6WIX6_SHEB8 Length = 227 Score = 87.5 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKH---FESTPDTPEIIATI 58 + H +P ++ +R +LL+ + G + P VDV I+RIR E I +I Sbjct: 158 LEHLMRSPNQVLTRGQLLEHVWGYDFDPCTNVVDVCIKRIRSKMASLEKAGKMVGAIESI 217 Query: 59 HGEGYRFC 66 G GYR Sbjct: 218 RGTGYRLS 225 >UniRef50_A9KGK4 Phosphate regulon transcriptional regulatory protein n=6 Tax=Coxiella burnetii RepID=A9KGK4_COXBN Length = 248 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P K SR +L+ + G + DRTVDV +RR+R + D +I TI G Sbjct: 178 LHFFMKHPNKTYSRDQLITYIWGGNIYIDDRTVDVQVRRLRDKLKKY-DHHHLIKTIRGA 236 Query: 62 GYRFCGDL 69 GY+ D Sbjct: 237 GYQLSTDD 244 >UniRef50_D1XII5 Two component transcriptional regulator, winged helix family n=1 Tax=Streptomyces sp. ACTE RepID=D1XII5_9ACTO Length = 253 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG + R +++ ++ G RT+DV + +R PE I T+ G Sbjct: 186 LAALVANPGVVLERRDIISRVWGENWFGSTRTIDVHVGSLRGKLG----CPEWIQTVRGV 241 Query: 62 GYRFCGD 68 GY+ Sbjct: 242 GYKLTAP 248 >UniRef50_C5VNC3 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VNC3_CLOBO Length = 231 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 31/64 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F EN G SR +LL G + VDV IRR+R E P P+ + T+ G Sbjct: 165 LKIFIENIGISLSRDKLLDLAWGYNFVGDPKIVDVNIRRLRSKLEDDPSYPKYLQTVWGT 224 Query: 62 GYRF 65 GY + Sbjct: 225 GYIW 228 >UniRef50_UPI0001C32387 two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32387 Length = 284 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 N G++ R + +++ G + DR+VDV +R++R+ E I T G G Sbjct: 188 RLLAGNAGQVLEREAIYQRVWGYAMAHGDRSVDVFVRKLRQKLERASPQWRYIHTHFGVG 247 Query: 63 YRFCGD 68 YRF + Sbjct: 248 YRFAPE 253 >UniRef50_B0P738 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P738_9FIRM Length = 224 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + +R +++ + + DRTVD I+ +R + I T+ Sbjct: 160 LYYLIRNTNIVLTRDQIICTVWDMDYAGDDRTVDTHIKCLRAKLGPYA---KCIVTVRKV 216 Query: 62 GYRFC 66 GY+F Sbjct: 217 GYKFE 221 >UniRef50_Q3AVF0 Response regulator receiver domain protein (CheY-like) n=2 Tax=Synechococcus RepID=Q3AVF0_SYNS9 Length = 227 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++ G++ SR +LL+++ E V+V +R +R+ E+ ++ T+ G Sbjct: 158 LLTLLQHQGRVLSRDQLLQQVWQDERASSGNVVEVYVRYLRQKLEAEG-EGRLLHTVRGR 216 Query: 62 GYRFCG 67 GY Sbjct: 217 GYCLGP 222 >UniRef50_C5QMK0 Hemin DNA-binding response regulator n=3 Tax=Bacillales RepID=C5QMK0_STAEP Length = 234 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 NP I +R ++++K+ G + + DRTVDV I+R+RK + I T+ G+GY Sbjct: 170 LLVSNPKHIFTRDDIIEKIWGFDYEGDDRTVDVHIKRLRKRLMQLEAS-VSIHTVRGQGY 228 Query: 64 R 64 Sbjct: 229 M 229 >UniRef50_A4E8P8 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E8P8_9ACTN Length = 220 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P + SR LL ++ G E RTVDV IRRIR P I T+ G Sbjct: 157 LSFLATHPNRAYSREVLLHRVWGFEYCGGTRTVDVHIRRIRSKVG--PQIAAHITTVRGV 214 Query: 62 GYRF 65 GY F Sbjct: 215 GYLF 218 >UniRef50_A4FNN5 Response regulator, two-component system n=12 Tax=Actinomycetales RepID=A4FNN5_SACEN Length = 237 Score = 87.1 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPD--TPEIIATIH 59 + ++ G++ +R E+L+++ + +T+D+ I +R+ + + IAT+ Sbjct: 169 LRVLMQHAGQVVTREEILEEVWPEPSRKGSKTLDMHISWLRRKLGDSNGRFDDQRIATVR 228 Query: 60 GEGYRFCGD 68 G G+RF D Sbjct: 229 GVGFRFNAD 237 >UniRef50_C2Z9H3 DNA-binding response regulator n=4 Tax=Bacillaceae RepID=C2Z9H3_BACCE Length = 226 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+I S+ ++ +K+ G + T+ V I +R + I T+ G Sbjct: 160 ILELLTVNLGQIFSKEQIYEKIWGLDAVGDLNTIIVHINNLRAKLS-LGMSTYHIKTVWG 218 Query: 61 EGYRFCG 67 GY+ Sbjct: 219 VGYKLEK 225 >UniRef50_C4FAP3 Putative uncharacterized protein n=3 Tax=Bacteria RepID=C4FAP3_9ACTN Length = 258 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG++ R + + + G + V +RRIR + + I T+ G Sbjct: 191 IVALLSKRPGQVFDRDAIYEHVWGWDAAGDPSQVREHVRRIRNKLAAAGVAEDPIETVWG 250 Query: 61 EGYRFCG 67 GY++ Sbjct: 251 VGYKWVA 257 >UniRef50_Q44006 Transcriptional activator protein czcR n=330 Tax=cellular organisms RepID=CZCR_RALME Length = 225 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ SR + ++ G VDV IRR+R P ++I T+ G Sbjct: 157 LHLLMRRRGEVLSRTTIASQVWGVNFDTDTNVVDVAIRRLRSKV-DDPFDQKLIHTVRGM 215 Query: 62 GYRFCGD 68 GY + Sbjct: 216 GYVLDPE 222 >UniRef50_Q030C5 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=6 Tax=Lactococcus lactis RepID=Q030C5_LACLS Length = 234 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E+ G+I SR ++L+++ G TVD +R +RK + +I TI G Sbjct: 172 LLFLFEHQGEIISRDDILEEVWGMNFGGQLNTVDTYVRYLRKKLDKN-----MIETIRGL 226 Query: 62 GYRFCGD 68 GYR D Sbjct: 227 GYRLNKD 233 >UniRef50_C0ZDC3 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDC3_BREBN Length = 231 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N + SR ++L + G + + VDV IR +R ES P ++I T+ G Sbjct: 167 LYYMVQNKEQAVSREQILTAVWGFDFMGNTNIVDVYIRYLRNKIESDPS-VKLIHTVRGI 225 Query: 62 GYRFC 66 GY Sbjct: 226 GYTLR 230 >UniRef50_Q1NA75 DNA-binding response regulator n=3 Tax=Alphaproteobacteria RepID=Q1NA75_9SPHN Length = 236 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + ++ G++ +R LL+ + P VDV + R+R+ E DTP + T+ G G Sbjct: 166 RYLMDHAGEVVTREMLLRHVWKLSFDPQTNVVDVNVGRLRRKLEEGFDTPVL-ETVWGTG 224 Query: 63 YRFCGDLE 70 YR + Sbjct: 225 YRLIARAD 232 >UniRef50_Q06239 Regulatory protein vanR n=26 Tax=Firmicutes RepID=VANR_ENTFC Length = 231 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + CEN G + S L ++ G E + T+ V IR +R+ T D P+ I T+ Sbjct: 164 ILRILCENKGNVVSSELLFHEIWGDEYFSKSNNTITVHIRHLREKMNDTIDNPKYIKTVW 223 Query: 60 GEGYRFCG 67 G GY+ Sbjct: 224 GVGYKIEK 231 >UniRef50_D2LRZ1 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LRZ1_BACS4 Length = 230 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 N GK+ SR LL+ G E + +RTVD ++ IR+ ++ T II T+ G Sbjct: 162 IFYRLASNRGKVYSRDHLLELEWGMEYEGDNRTVDTHVKNIREKLKAVGYTDAIIETVWG 221 Query: 61 EGYR 64 GY+ Sbjct: 222 IGYK 225 >UniRef50_A6CDX9 Two component transcriptional regulator, winged helix family protein n=2 Tax=Bacteria RepID=A6CDX9_9PLAN Length = 231 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F NPGK+ SR + + T++V ++ +R E+ P +I T+ G Sbjct: 160 LLFFLRNPGKVLSRTRIYDTVWDDSYDGLSNTLEVHVKELRHKLEACG--PRVIQTLRGR 217 Query: 62 GYRFCGDLED 71 GY +D Sbjct: 218 GYVLETTSDD 227 >UniRef50_B8GBX2 Two component transcriptional regulator, winged helix family n=9 Tax=Chloroflexi RepID=B8GBX2_CHLAD Length = 247 Score = 87.1 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +N G + + LL K+ G E + + + I +R+ E P P I T G Sbjct: 167 LYHLVQNAGYVLTHEMLLSKVWGPEYRDESHYLRLYITYLRQKIEEDPSNPRYILTERGV 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFV 231 >UniRef50_Q2IGB7 Two component transcriptional regulator, winged helix family n=5 Tax=Cystobacterineae RepID=Q2IGB7_ANADE Length = 227 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 + G++ SR L++ + G+E + + VDV + +R E I ++ G GYR Sbjct: 159 LARHAGEVLSRTRLIETVWGQEFEGNSNVVDVYVGYLRTKLERLGAPGVRIESVRGVGYR 218 Query: 65 FCGDL 69 Sbjct: 219 LVVPP 223 >UniRef50_D1VK99 Putative two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VK99_9ACTO Length = 196 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 6/71 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHD----RTVDVTIRRIRKHFESTPDTPEIIA 56 + +PG++ SRA LL+ + G + RTVDV + R+R+ I Sbjct: 121 VLDFLVRHPGRVYSRAALLRHVWGHRVDDDPGQAGRTVDVLVTRLRRKLGPD--NRSRIE 178 Query: 57 TIHGEGYRFCG 67 T+ GYR+ Sbjct: 179 TVRRVGYRYRP 189 >UniRef50_C9L5Y5 Regulatory protein VanR n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5Y5_RUMHA Length = 299 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + CE G + S EL ++ E + T+ V IR +R+ E + + P+ I T+ Sbjct: 232 ILAILCEQKGNVVSAEELFHQIWKDEYYSKSNNTITVHIRHLREKMEDSFENPKYIKTVW 291 Query: 60 GEGYRFCG 67 G GY+ Sbjct: 292 GCGYKIEK 299 >UniRef50_B4CW77 Two component transcriptional regulator, winged helix family n=2 Tax=Verrucomicrobia RepID=B4CW77_9BACT Length = 229 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ SR ++ + G + + R++D + +R E P P I+ T+ Sbjct: 162 LTFLVTNAGRALSRDRIMSTVWGYDSRVTPRSIDRFVNALRNKIEPDPAEPRILKTVREF 221 Query: 62 GYRFC 66 GY+F Sbjct: 222 GYKFE 226 >UniRef50_C6RFL7 Two component transcriptional regulator, winged helix family n=1 Tax=Campylobacter showae RM3277 RepID=C6RFL7_9PROT Length = 224 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGKI +R E+++++ G + +R VD ++++R+ E T IAT+ G Sbjct: 159 LFLLLSNPGKIFTRLEIMQEIWGYDTDSDERAVDTHVKKLRRKLE--GCTDFEIATVRGI 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_A6W3G3 Two component transcriptional regulator, winged helix family n=9 Tax=Gammaproteobacteria RepID=A6W3G3_MARMS Length = 244 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F +PG + +R + + GR+ P DR +DV + R+R+ P++I TI G+ Sbjct: 170 LMLFLTHPGAVLTRELIAENTRGRDSAPLDRFIDVHVSRLRQRLREDARQPQLIKTIRGQ 229 Query: 62 GYRFCGDLE 70 GY +E Sbjct: 230 GYILTASVE 238 >UniRef50_B9CKZ5 Transcriptional regulator domain protein n=2 Tax=Atopobium RepID=B9CKZ5_9ACTN Length = 224 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P + SR LL+++ G E RTVDV +RR+R P I T+ G Sbjct: 161 LAFLANHPSRAYSREVLLQRVWGFEYCGGTRTVDVHVRRVRSKIG--PQAAAHIETVRGV 218 Query: 62 GYRFC 66 GY F Sbjct: 219 GYLFR 223 >UniRef50_C3WCS3 Two-component system response regulator n=4 Tax=Bacteria RepID=C3WCS3_FUSMR Length = 223 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N SR +LL ++ G + DRT+D I+ +RK I TI G Sbjct: 163 LVYLIKNNKIALSREKLLNEVWGYDFLGDDRTIDTHIKNLRKKIGKNA-----IKTIRGI 217 Query: 62 GYRFC 66 GY+ Sbjct: 218 GYKLD 222 >UniRef50_C4LLE8 Two-component system, response regulator n=19 Tax=Corynebacterium RepID=C4LLE8_CORK4 Length = 268 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG++ +R +L+ ++ +R VDV I +R+ + I T+ G Sbjct: 202 LVALALRPGQVLTRHDLVTEVWDTTWVGDERIVDVHIGNLRRKLGTDTRGRGFIDTVRGV 261 Query: 62 GYR 64 GYR Sbjct: 262 GYR 264 >UniRef50_P35163 Transcriptional regulatory protein resD n=162 Tax=Bacteria RepID=RESD_BACSU Length = 240 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFES-TPDTPEIIATIHG 60 + + P K+ R +LLK++ E RTVD ++R+R+ +P+ + I T+ G Sbjct: 171 LYFLAKTPDKVYDREKLLKEVWQYEFFGDLRTVDTHVKRLREKLNKVSPEAAKKIVTVWG 230 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 231 VGYKFEVGAE 240 >UniRef50_P52108 Transcriptional regulatory protein rstA n=163 Tax=Proteobacteria RepID=RSTA_ECOLI Length = 239 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+I R LLK + G DR+VDV I R+RK P I T+ + Sbjct: 170 LWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNK 229 Query: 62 GYRFCG 67 GY F Sbjct: 230 GYLFAP 235 >UniRef50_B2V7Q1 Two component transcriptional regulator, winged helix family n=3 Tax=Hydrogenothermaceae RepID=B2V7Q1_SULSY Length = 231 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + GK+ SR +++ + + +DRT+DV I+++R+ + I TI G Sbjct: 165 LLALVNSQGKVLSRDYIIEHVWAWDKDVYDRTIDVHIKKLRELLKEYG---NCIKTIRGV 221 Query: 62 GYRFCGDL 69 GY++ + Sbjct: 222 GYKWECEP 229 >UniRef50_B0TXI9 Response regulator receiver protein n=14 Tax=Francisella RepID=B0TXI9_FRAP2 Length = 229 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ ++ S+ +LK++ + P V+V I R+R P+ I TI G Sbjct: 164 VLHLLLKHKNEVVSKTMILKEVWDYDFDPQTNVVEVHISRLRNKLTENGL-PDPIKTIRG 222 Query: 61 EGY 63 GY Sbjct: 223 FGY 225 >UniRef50_UPI0001C424C1 hypothetical protein BpOF4_12950 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C424C1 Length = 377 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL + G E P DRTVD I R+RK + + I TI G+ Sbjct: 30 LHFLYRHPNQVFSRDKLLDAVWG-EGTPTDRTVDDHIYRVRKKLGTL-KSGIKINTIRGQ 87 Query: 62 GYRFCG 67 GY Sbjct: 88 GYCLIK 93 >UniRef50_UPI0001C355EA transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355EA Length = 234 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ ++ ++ + ++ +V+ I R+RK E P I TI G Sbjct: 164 LYYLASNQGQVINKEQIYYHLWKEDIGVGSNSVETLIMRLRKKLEPDKSDPIFIETIRGG 223 Query: 62 GYRFCGD 68 GYRF + Sbjct: 224 GYRFKLE 230 >UniRef50_UPI000196BAD1 hypothetical protein CATMIT_00504 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD1 Length = 223 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 +NP +I +R +L++K+ G + DRTVDV I+RIR++ P + T+ G GY+ Sbjct: 162 LAKNPNQIFTREQLIEKIWGMDYDGFDRTVDVHIKRIRENLGHLPG--FKVVTVRGLGYK 219 Query: 65 FCGD 68 + Sbjct: 220 IEVE 223 >UniRef50_C8WJL3 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJL3_EGGLE Length = 234 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +PG++ ++A+L + ++ + ++ V I IR E P+ P I T+ G Sbjct: 168 IFSKLFSSPGRVYTKAQLYELISASSHGGGEDSIMVHISNIRSKIEDDPNNPAHIVTVRG 227 Query: 61 EGYRFCG 67 GYRF G Sbjct: 228 LGYRFEG 234 >UniRef50_C7LY45 Two component transcriptional regulator, winged helix family n=2 Tax=Actinobacteria (class) RepID=C7LY45_ACIFD Length = 236 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + + +++ + + + V+V I +RK P + I TI G Sbjct: 158 LELLLRNKGHVLRKQDIIAHVWDYDFEGDSNIVEVYIGYLRKKI-DVPFGTKAITTIRGV 216 Query: 62 GYRFCGD 68 GYR D Sbjct: 217 GYRLEED 223 >UniRef50_B0G2J4 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G2J4_9FIRM Length = 257 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N + S L + + + TV V IR +R E P PE+I T+ G Sbjct: 192 LELLVANRHQTFSAQRLFESVWQEPYYYGANNTVTVHIRNLRSKVEDHPGNPELIKTVWG 251 Query: 61 EGYR 64 +GYR Sbjct: 252 KGYR 255 >UniRef50_P51358 Probable transcriptional regulator ycf27 n=96 Tax=cellular organisms RepID=YCF27_PORPU Length = 243 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + G+ SRA +L+++ G E R VDV I R+R E P P++I T Sbjct: 169 LELLVSKAGEPFSRASILQEVWGYTPERHVDTRVVDVHISRLRAKLEDDPSNPDLILTAR 228 Query: 60 GEGYRF 65 G GY F Sbjct: 229 GTGYLF 234 >UniRef50_B1VZK5 Putative transcriptional regulator n=8 Tax=Streptomyces RepID=B1VZK5_STRGG Length = 220 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +P ++ +R +L+ + G RTVDV + R+R+ + + I T+ Sbjct: 157 LSHLVAHPHRVHTRDQLVTTVWGYGHVGDGRTVDVHVARLRRKLGA--EYRRSIQTVRRV 214 Query: 62 GYRFCG 67 GY++ Sbjct: 215 GYKYTP 220 >UniRef50_B4WSX3 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WSX3_9SYNE Length = 640 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ S ++ + E P + V ++ +R+ ++ + I T++G Sbjct: 184 LELFLRHPNQVFSIDAIIDNLWSFEDPPSEDAVRTHVKGLRQKLKAGGAPKDFIQTVYGL 243 Query: 62 GYRFCG 67 GYR Sbjct: 244 GYRLKA 249 >UniRef50_Q47744 Regulatory protein vanRB n=13 Tax=Bacteria RepID=VANR_ENTFA Length = 220 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +N G+ + +L ++ G + TV I+ +R II TI G Sbjct: 157 ILLLLVQNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRG 211 Query: 61 EGYRFC 66 GYR Sbjct: 212 VGYRLE 217 >UniRef50_UPI00016B25CE two component transcriptional regulator, winged helix family protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25CE Length = 224 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G+ S+ ++++ + + TV+ I+ +RK + I T+ G Sbjct: 160 LQYLMKSSGQTLSKEQIMEHVWNFDADILPNTVEAYIKALRKKI-DEKYKVKYIKTVRGI 218 Query: 62 GYRFC 66 GYR Sbjct: 219 GYRLE 223 >UniRef50_B1ZLF1 Two component transcriptional regulator, winged helix family n=23 Tax=cellular organisms RepID=B1ZLF1_METPB Length = 291 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P + SR LL R+ DR +DV I RIRK E P P I T+ G Sbjct: 223 LKAFADHPKRALSRERLLDLADARDPDAFDRAIDVRINRIRKKVEPDPANPRFIRTVRGL 282 Query: 62 GYRFCGDLE 70 GY F D + Sbjct: 283 GYIFRPDGD 291 >UniRef50_A5UQY1 Two component transcriptional regulator, winged helix family n=6 Tax=Chloroflexi (class) RepID=A5UQY1_ROSS1 Length = 227 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G+ SR ++L + + + VDV I +R+ ++ + + I T+ G Sbjct: 160 LEYLMRNAGQALSRQQILDHVWSYDHDVQPQMVDVYIAYLRRKLNASGER-DPIVTVRGV 218 Query: 62 GYRFCG 67 GYR Sbjct: 219 GYRLEA 224 >UniRef50_P69229 Transcriptional regulatory protein baeR n=214 Tax=Bacteria RepID=BAER_ECOL6 Length = 240 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK+ SR +LL + DRT+D I+ +R+ ES I ++G Sbjct: 169 LKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGV 228 Query: 62 GYRFCGD 68 GYR+ D Sbjct: 229 GYRWEAD 235 >UniRef50_D1BX45 Two component transcriptional regulator, winged helix family n=26 Tax=Actinomycetales RepID=D1BX45_XYLCX Length = 227 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + R L++ + G + +T+D+ + +R+ + P ++T+ G Sbjct: 159 LKVLVANAGSVVVRDTLMRDVWGSDPVGSTKTLDMHVSWLRRKLGDDANAPRYVSTVRGL 218 Query: 62 GYRFCG 67 G+RF Sbjct: 219 GFRFEA 224 >UniRef50_UPI0001C318D2 two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318D2 Length = 224 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F +P + SR ++L + G + P V+V IR +R+ E P P I T+ Sbjct: 158 LAYFLRHPDQALSRQQILSAVWGYDFDPGTNVVEVYIRYLRRKLE-LPGRPTPIDTLRSV 216 Query: 62 GYRFCG 67 GYR Sbjct: 217 GYRLTT 222 >UniRef50_B9L1T3 Phosphate regulatory protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1T3_THERP Length = 253 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G++ +R ELL + G++ R VDV I RIR+ PD +I T+HG Sbjct: 176 LTALVERAGRVCTRQELLDLVWGQD-VVDLRNVDVHIHRIREALGGEPDGSNLIRTVHGI 234 Query: 62 GYRFCGD 68 GYRF + Sbjct: 235 GYRFVPE 241 >UniRef50_A1ULT5 Two component transcriptional regulator, winged helix family n=5 Tax=Corynebacterineae RepID=A1ULT5_MYCSK Length = 247 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ E G++ S E+ + + G TV V +RR+R+ P E I TI G Sbjct: 180 LVYLIERHGRVASSDEISRAVWG--HPADTNTVAVHVRRLREKLGHDPQHGEFIRTIRGA 237 Query: 62 GYRFCG 67 GYR Sbjct: 238 GYRLAP 243 >UniRef50_C0ZH45 Two-component response regulator n=2 Tax=Bacillales RepID=C0ZH45_BREBN Length = 229 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+P + SR ELL + G + DR VD IRRIRK + P + T+ G Sbjct: 161 VLSLLSEHPNRAFSRDELLSLIWGFDYFGSDRVVDDLIRRIRKKLDKIP-----LETVWG 215 Query: 61 EGYRFCG 67 GYR Sbjct: 216 FGYRLRT 222 >UniRef50_B8HEE3 Two component transcriptional regulator, winged helix family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEE3_ARTCA Length = 265 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F P ++ ++ LL+++ G E + V+V I +R+ + +II T+ G Sbjct: 195 LAAFMGAPRRVWTKESLLRRVWGDEWATDEHLVEVHIGNLRRKIRAGGSEAQIIRTVRGV 254 Query: 62 GYRFCGD 68 GY Sbjct: 255 GYGLVPP 261 >UniRef50_B2TMR2 Transcriptional regulatory protein ResD n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TMR2_CLOBB Length = 227 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 35/66 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L NP KI SR ELL+ + + DR +D I+ +R+ E +II TI+G Sbjct: 159 ILLLMASNPQKIYSREELLESVIEEYYEKMDRVIDSHIKNLRQKIEVNSRDCKIIKTIYG 218 Query: 61 EGYRFC 66 GYRF Sbjct: 219 VGYRFE 224 >UniRef50_Q07HK8 Two component transcriptional regulator, winged helix family n=13 Tax=cellular organisms RepID=Q07HK8_RHOP5 Length = 258 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + FCE G++ SR LL+ G DR++DV + RIR+ E+ P +I T+ Sbjct: 179 LRAFCERAGRVLSREVLLELTQGPNCGSFDRSIDVLVSRIRRKIEADPADALMIKTVRSG 238 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 239 GYMFTPVVE 247 >UniRef50_C6JBE6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBE6_9FIRM Length = 142 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ ++A++ + + E + V I +RK E P I T+ G Sbjct: 75 LCCLATSPGRVFTKAQIFEAVWSLESESCQSNVANVICNLRKKIEPDSGKPTYIKTVLGV 134 Query: 62 GYRFCG 67 GY+F Sbjct: 135 GYKFAS 140 >UniRef50_C8WRL6 Two component transcriptional regulator, winged helix family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL6_ALIAD Length = 221 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ N + SR ELL+++ G + VDV I +R+ + I T+ G+ Sbjct: 156 LLYLLRNVNRTCSRQELLERVWGFQAPGDTNVVDVYIGYLRQKLDP---ERRYIKTVRGQ 212 Query: 62 GYRFCGDL 69 GYR + Sbjct: 213 GYRLEVEE 220 >UniRef50_Q0TNL1 DNA-binding response regulator n=8 Tax=Clostridium perfringens RepID=Q0TNL1_CLOP1 Length = 232 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+F +NP SR ++L + G E RTVDV +RR+R+ + EII TI G Sbjct: 166 LLYFLDNPNIALSRDQILDGVWGDEYFGDFRTVDVHVRRLRQKL----NNEEIIETIFGL 221 Query: 62 GYRFCGD 68 GY F G+ Sbjct: 222 GYMFKGE 228 >UniRef50_C0CKG8 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKG8_9FIRM Length = 223 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N + +R ++L+K+ G + + RT+D I+ +R +S I TI G Sbjct: 159 LVYLMQNRDIVLTRDQILEKVWGFDYEGDIRTIDTHIKMLRMDLKSCGS---YIRTIRGM 215 Query: 62 GYRFCGD 68 GY + Sbjct: 216 GYTLSSE 222 >UniRef50_B3DXI2 Phosphate regulon transcriptional regulatory protein phoB n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXI2_METI4 Length = 258 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G +QSR +LLK++ G + RT+D IRR+R + + T+ G Sbjct: 194 LSTLVEREGAVQSREQLLKEVWGYDKTVDTRTIDTHIRRLRDKLGRAS---QYLRTVRGI 250 Query: 62 GYRF 65 GYRF Sbjct: 251 GYRF 254 >UniRef50_D1VT61 Regulatory protein VanR n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT61_9FIRM Length = 227 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP KI S+ L + + E D T++V I +R + E I T+ Sbjct: 162 ILKILLKNPNKIFSKENLYRSVWNDEYFFEDDTINVHISNLRSKIKKLDTE-EYIETVWA 220 Query: 61 EGYRF 65 GYR Sbjct: 221 VGYRL 225 >UniRef50_Q21BK9 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BK9_RHOPB Length = 242 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 41/68 (60%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+I SR +LL M+ RE +DRTVDV + R+R+ E+ P P+II T +G Sbjct: 174 LAALVRHPGRIMSRNDLLDVMSSREWDSNDRTVDVLVGRLRRKIEADPGKPQIIVTEYGL 233 Query: 62 GYRFCGDL 69 GY F + Sbjct: 234 GYVFAEKV 241 >UniRef50_A5N8U3 Transcriptional regulator n=3 Tax=Clostridium RepID=A5N8U3_CLOK5 Length = 229 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S L + + +D TV + I+ +R+ + + I TI G Sbjct: 161 ILYTLAYNRGRVYSTKILYEMLWKDNFMQNDNTVTMHIKNLREKLGDSVKQGKYIKTIWG 220 Query: 61 EGYRFCGDL 69 GY+ ++ Sbjct: 221 VGYKIEKNI 229 >UniRef50_B0G7M7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0G7M7_9FIRM Length = 231 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ENP I S+ EL K+ R D T+ V I+++R E P P I T+ G+ Sbjct: 167 LYLFIENPEYIFSKQELFSKVW-RSDNCDDSTILVYIKKLRDKLEDDPSHPTHICTVWGK 225 Query: 62 GYRFC 66 GY+FC Sbjct: 226 GYKFC 230 >UniRef50_C4ZP42 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=C4ZP42_THASP Length = 242 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 40/70 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG+I R L + ++G + P DR+VDV +RR+R + T +IATI G Sbjct: 169 VLALLVRHPGEILDRDRLSRAVSGHDWSPQDRSVDVLVRRLRAKLDDPARTDSLIATIRG 228 Query: 61 EGYRFCGDLE 70 EGYR D+E Sbjct: 229 EGYRLAADVE 238 >UniRef50_C0BVZ7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BVZ7_9CLOT Length = 225 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F NPGK + + + G + +T+ V I+ +R E P P+ I T+ G Sbjct: 159 LLLFVRNPGKTLRKEYIFGNVWGTDSFSESQTLTVHIKMLRAKIEENPREPKRILTVWGV 218 Query: 62 GYRFC 66 GYR+ Sbjct: 219 GYRYE 223 >UniRef50_Q8RBP2 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain n=3 Tax=Clostridia RepID=Q8RBP2_THETN Length = 224 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 N GK+ SR + L ++ G + RTVD I+++R+ +I T+ G GY+ G Sbjct: 167 NKGKVVSREKCLNEVWGYDFYGDLRTVDTHIKQLREKLGE---KRNLIKTVWGIGYKLEG 223 Query: 68 D 68 D Sbjct: 224 D 224 >UniRef50_C8PVM6 Putative transcriptional regulator OmpR n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVM6_9GAMM Length = 245 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F + GK+ SR +L M + DR +DV I R+R E P P+ I T+ G Sbjct: 176 LHYFATHSGKVLSREQLWHAMPNDDSSDNIDRAIDVHISRLRALIEDNPRQPKRIITVRG 235 Query: 61 EGYRFCGD 68 GY+F D Sbjct: 236 VGYQFATD 243 >UniRef50_C6NVH5 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVH5_9GAMM Length = 247 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SR LL + GR+ +RTVDV IRR+R+ II T+ GE Sbjct: 171 LRLFATNPDRVYSREALLDHIWGRQSFIEERTVDVHIRRLRRALAKVG-YANIIETVRGE 229 Query: 62 GYR 64 GYR Sbjct: 230 GYR 232 >UniRef50_C7TGP3 Two-component response regulator n=8 Tax=Lactobacillus RepID=C7TGP3_LACRL Length = 226 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 NPG++ SR +L +K+ G + + +R + IRRIR I T+ G GY+ Sbjct: 165 LSLNPGQVFSREQLYEKIWGYDAQGDERVITEHIRRIR-KLFDACQVTSPIVTVWGVGYK 223 Query: 65 F 65 + Sbjct: 224 W 224 >UniRef50_P0A5Z7 Transcriptional regulatory protein prrA n=41 Tax=Actinomycetales RepID=PRRA_MYCBO Length = 233 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+ + SRA+LL+ + G + VDV I +R+ E+ P ++ T+ G Sbjct: 168 LAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA-GGGPRLLHTVRGV 226 Query: 62 GYRFC 66 G+ Sbjct: 227 GFVLR 231 >UniRef50_A5WHF9 Two component transcriptional regulator, winged helix family n=3 Tax=Psychrobacter RepID=A5WHF9_PSYWF Length = 240 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F + GK+ +R +L + M + DR +DV I R+R E P P+ I T+ G Sbjct: 171 LHYFATHAGKVLNREQLWQAMPNDDSSDNIDRAIDVHISRLRALIEDNPRQPKRIITVRG 230 Query: 61 EGYRFCGD 68 GY+F D Sbjct: 231 VGYQFATD 238 >UniRef50_C7N3P1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3P1_SLAHD Length = 242 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHD-RTVDVTIRRIRKHFESTPDTPEIIATIH 59 +LH E G+ S +L ++ G TV V IR +RK + I T+ Sbjct: 169 VLLHLAERAGEPVSARDLYERAWGETYDASAGNTVMVHIRHLRKKCADVDSSQTFIDTVW 228 Query: 60 GEGYRFCGDLE 70 G GYR G Sbjct: 229 GVGYRLHGPQR 239 >UniRef50_A1VI78 Two component transcriptional regulator, winged helix family n=54 Tax=Bacteria RepID=A1VI78_POLNA Length = 282 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 28/66 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ +R EL ++ DRT+D I+ +R ++ E I T G Sbjct: 211 ILRLLVLRPGRVFTRDELFDQVWTDGSGSLDRTIDAHIKTLRAKLKAVAPHAEPIRTSRG 270 Query: 61 EGYRFC 66 GY Sbjct: 271 SGYALS 276 >UniRef50_Q01RB2 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01RB2_SOLUE Length = 242 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ +R L+ + G E T+DV IR++R E T +++ T+ G Sbjct: 173 ILEILMRSSGRVITRTRLIDAVWGHERDVQSNTLDVFIRQLRTKIEPAGTT-KLLHTVRG 231 Query: 61 EGYRFCGDL 69 GY + Sbjct: 232 IGYTLREEE 240 >UniRef50_B0TF57 Transcriptional regulator, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF57_HELMI Length = 277 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ K+ +R +LL ++ G + R+VD ++R+RK + T E I T+ G Sbjct: 205 LSFLAKHKKKVFTREQLLDQIWGYHFAGNLRSVDDLVKRLRKKLAQSGSTLE-IKTVWGY 263 Query: 62 GYR 64 GY+ Sbjct: 264 GYK 266 >UniRef50_A0L527 Two component transcriptional regulator, winged helix family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L527_MAGSM Length = 250 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 43/68 (63%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F G+ QSR +LL ++ RE P+DRT+DV + R+R+ E P+++ TIHG Sbjct: 174 LLAFVNRAGRAQSRDQLLDAVSNREWSPNDRTIDVMVNRLRRKLEVDARDPKLLITIHGV 233 Query: 62 GYRFCGDL 69 GY+F ++ Sbjct: 234 GYQFTPEV 241 >UniRef50_C9LLD5 DNA-binding response regulator ResD n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLD5_9FIRM Length = 234 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFES-TPDTPEIIATIHG 60 + +P ++ S+ +L +++ + TV V I R+R + + E I T+ G Sbjct: 167 LYFLATHPNEVFSKEQLFEQIWSLDPIGEPATVTVHINRLRSKLKKVSGRAYERIETVWG 226 Query: 61 EGYRFCGD 68 GYRF G+ Sbjct: 227 SGYRFHGN 234 >UniRef50_C3X860 Response regulator receiver protein n=2 Tax=Oxalobacter formigenes RepID=C3X860_OXAFO Length = 233 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ SR++LL K+ +L +RTVDV + R+RK + ++ T+ G Sbjct: 166 LKFLMANPDRVFSRSQLLDKVWSNQLDIEERTVDVHVLRLRKALK---GQENLVRTVRGM 222 Query: 62 GYRFCGDLE 70 GY + Sbjct: 223 GYMLSEKDK 231 >UniRef50_Q1GKH2 Two component transcriptional regulator, winged helix family n=28 Tax=Rhodobacterales RepID=Q1GKH2_SILST Length = 239 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F E+P ++ SRA++++++ G DR +DV I R+R P P +I TI+G Sbjct: 168 VLRLFLESPKRLISRAQMMERLGGGAGDSFDRAMDVRISRLRTKLREDPKNPRLIKTIYG 227 Query: 61 EGYRFCGDL 69 GY F GD+ Sbjct: 228 AGYIFLGDV 236 >UniRef50_Q1CZP3 DNA-binding reponse regulator n=2 Tax=Myxococcales RepID=Q1CZP3_MYXXD Length = 231 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E PG+ +RA++ + + DRTVD I RIRK I T G Sbjct: 163 VLAYLAERPGRALTRAQIAQHALPPSEERDDRTVDSHIARIRKKLGPAGA---RIQTSWG 219 Query: 61 EGYRFCGDLE 70 GYRF D E Sbjct: 220 IGYRFVPDEE 229 >UniRef50_C7LNV6 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNV6_DESBD Length = 229 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +PG+ +R + + G L H R VDV ++R+RK E P P II T+ G Sbjct: 161 LELFVAHPGETLTRDFIQSQNWGDSKLYSHSRAVDVHVQRLRKKIEENPQAPRIILTVAG 220 Query: 61 EGYRFCGDL 69 GYRF + Sbjct: 221 VGYRFEPNP 229 >UniRef50_Q47ZA2 DNA-binding response regulator n=20 Tax=Alteromonadales RepID=Q47ZA2_COLP3 Length = 238 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++Q+R + K + GRE DR+VDV I R+RK + DTP I TI G+ Sbjct: 169 LWLLAGKAGEVQNRDYIYKAVIGREYDGLDRSVDVRISRLRKKLHDSTDTPFRIKTIWGQ 228 Query: 62 GYRFCGD 68 GY F D Sbjct: 229 GYLFVPD 235 >UniRef50_B5EQN9 Two component transcriptional regulator, winged helix family n=3 Tax=Proteobacteria RepID=B5EQN9_ACIF5 Length = 243 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SR LL ++ GR+ +RTVDV IRR+R+ E +II T+ GE Sbjct: 168 LRLFVTNPERVFSRDMLLDQIWGRQSFVEERTVDVHIRRLRRGLEHHG-YAQIIETVRGE 226 Query: 62 GYR 64 GYR Sbjct: 227 GYR 229 >UniRef50_UPI00016988BE Two component Transcriptional regulator, Winged helix family protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016988BE Length = 175 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+ G++ SR L++ G E DR++DV + R+R+ E P P + T+ G Sbjct: 107 LRVFLEHSGRVLSRDMLMEITKGYERSHLDRSIDVCVNRLRRKIEPNPSEPIYLRTVWGA 166 Query: 62 GYRFCGDLE 70 GY F + E Sbjct: 167 GYLFSRNGE 175 >UniRef50_UPI0001C3717E DNA-binding response regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3717E Length = 225 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP K ++AEL + + D T++V + +R + E I T+ G Sbjct: 160 LELFMKNPKKTYTKAELYESVWNDVYYYEDNTINVHVSNLRNKLKKVSGR-EHIETVWGI 218 Query: 62 GYRFCGD 68 GYR + Sbjct: 219 GYRLRSE 225 >UniRef50_D0LLH3 Two component transcriptional regulator, winged helix family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLH3_HALO1 Length = 226 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP ++ SR ELL+++ + RTVD + ++R ES P+ P T+ G Sbjct: 162 LAFLVKNPSRVFSREELLRQVWKQSS-GTLRTVDNFVAQLRSKLESDPENPRFFITVRGS 220 Query: 62 GYRFCG 67 GYRF Sbjct: 221 GYRFDS 226 >UniRef50_UPI00019732E7 DNA-binding response regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019732E7 Length = 236 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ SR +L + + + D TV I+ +RK TP E I + G Sbjct: 165 LFCLASHVGQVLSREQLYQMVWDENSVYNVDETVKAHIKSLRKKL--TPSGAEYIKNVWG 222 Query: 61 EGYRFCGDLE 70 GYRF D Sbjct: 223 IGYRFSTDEN 232 >UniRef50_Q1AXX7 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXX7_RUBXD Length = 231 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG+ +RA++ + ++ R +DV I R+R E P PEII T+ Sbjct: 162 ILALLLRRPGQAFTRAQISEAVSTGSHYLASRYIDVHISRLRSKIERDPSRPEIIQTVPS 221 Query: 61 EGYR 64 GYR Sbjct: 222 VGYR 225 >UniRef50_B1ZTF3 Two component transcriptional regulator, winged helix family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTF3_OPITP Length = 269 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 29/65 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ SR LL+ + G P R+VD + R+R+ T P I ++ G Sbjct: 187 LDLLVHARGRAVSRERLLRAIWGNVNPPASRSVDTHVWRLRRKIGDTGHEPHWIKSVPGV 246 Query: 62 GYRFC 66 GY+ Sbjct: 247 GYQLE 251 >UniRef50_C4L1Q9 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L1Q9_EXISA Length = 224 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ +R +LL ++ G E + RTVDV I R+R + P I+T+ G Sbjct: 159 LYFLATHLNQVFTRQQLLDRIWGYETESETRTVDVHINRLRARLK--PIDAFQISTVWGL 216 Query: 62 GYRFC 66 GYR Sbjct: 217 GYRLE 221 >UniRef50_B7JF46 DNA-binding response regulator n=87 Tax=Bacteria RepID=B7JF46_BACC0 Length = 225 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+ SR EL++ + G + + +RTVDV ++R+R F D + I T+ G Sbjct: 160 LSQLASYPGRTFSREELIELVWGMDFEGDERTVDVHVKRLRDRFSKRTDDFQ-ITTVRGL 218 Query: 62 GYRFC 66 GY+ Sbjct: 219 GYKLE 223 >UniRef50_C1SGQ1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGQ1_9BACT Length = 223 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P ++ +R ++L + G E + RTVD + +RK + I ++ Sbjct: 161 LQLLLKHPKRVFTRNQILNAVWGYESDVYTRTVDTHVSSLRKKLGTRGS---FIKSVPKI 217 Query: 62 GYR 64 GYR Sbjct: 218 GYR 220 >UniRef50_A5F0A5 Transcriptional regulator n=77 Tax=Proteobacteria RepID=A5F0A5_VIBC3 Length = 245 Score = 85.6 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 7/67 (10%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHG 60 +L N G++ +R ELL + G P RTVD + ++R+ P + I T+ G Sbjct: 185 LLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKL------PGLEIETLRG 238 Query: 61 EGYRFCG 67 GY+ Sbjct: 239 VGYKMKA 245 >UniRef50_C6HUL5 Two component transcriptional regulator, winged helix family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUL5_9BACT Length = 232 Score = 85.6 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ G++ R LL + G + + DRTVDV IRR+RK + + T+ Sbjct: 164 LVALMRVAGRVLDRETLLNTVWGDDYEGTDRTVDVHIRRLRKKMGESAA---WVETVKQI 220 Query: 62 GYRFCGD 68 GYRF + Sbjct: 221 GYRFREE 227 >UniRef50_D0SP77 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Acinetobacter junii SH205 RepID=D0SP77_ACIJU Length = 240 Score = 85.6 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P K+ SR +L+ + +RTVD I+ +R+ + + I T G Sbjct: 173 LFLLIQHPEKVFSRQQLMDHIWEHPEHSLERTVDTHIKSLRQKLKQITPDDDPIRTHRGF 232 Query: 62 GYRFCG 67 GY Sbjct: 233 GYSLVK 238 >UniRef50_C8P1C0 Regulatory protein VanR n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1C0_ERYRH Length = 231 Score = 85.6 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + N GKI S + + + E TV V IR +RK E+ P+ P+II I Sbjct: 165 ILKLLATNRGKIFSIQSIYENVWQDEYLYSSANTVMVHIRNLRKKIENCPENPKIIKNIW 224 Query: 60 GEGYR 64 G GY+ Sbjct: 225 GRGYK 229 >UniRef50_Q1NHM9 DNA-binding response regulator n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHM9_9SPHN Length = 224 Score = 85.6 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ SRA LL+++ P V+ + R+R+ + + I T+ G Sbjct: 158 LEQLIRQQDQVVSRAMLLEQVWHFHFDPQTNIVETHMSRLRQKLNA-GFDCDPIQTVRGV 216 Query: 62 GYRFCGD 68 GY+ D Sbjct: 217 GYKLRSD 223 >UniRef50_B6ITF9 TorCAD operon transcriptional regulatory protein TorR n=1 Tax=Rhodospirillum centenum SW RepID=B6ITF9_RHOCS Length = 241 Score = 85.6 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 40/70 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ +R +L+ ++G + P+DRT+DV + R+R+ T +P +I T G Sbjct: 170 LALLVRSGGRVVTRDQLIDAVSGTDRNPNDRTIDVLVSRLRRKMCDTGVSPRLILTEKGL 229 Query: 62 GYRFCGDLED 71 GYR D+ D Sbjct: 230 GYRLGVDVTD 239 >UniRef50_A1VB66 Two component transcriptional regulator, winged helix family n=3 Tax=Desulfovibrio vulgaris RepID=A1VB66_DESVV Length = 242 Score = 85.6 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L EN G + +R ++K++ G + P +DV I ++R+ E P +I T+ G Sbjct: 173 LLLLMENAGTVVTRNMIVKRVWGYDFMPGSNIIDVQICQLREKTERNGA-PRVIHTMRGV 231 Query: 62 GYRF 65 GY F Sbjct: 232 GYVF 235 >UniRef50_UPI0001B9ECAC two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECAC Length = 317 Score = 85.6 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P +I SR LL+K+ + D T++V I R+RK + + T+ G Sbjct: 246 ILDELMKKPEQIVSRDRLLEKIWDDQAFVDDNTLNVYITRVRKKLAALGIEDGL-QTVRG 304 Query: 61 EGYRFCGDLED 71 GYR D Sbjct: 305 RGYRLVPSWRD 315 >UniRef50_B2TIW8 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=7 Tax=Clostridium RepID=B2TIW8_CLOBB Length = 231 Score = 85.6 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +NP K+ +R ELL K+ G + R VD+ I+RIR+ ++I TI+G Sbjct: 168 IILLMVQNPFKVFTREELLDKIWGYSFVGNTRAVDIHIKRIRQKLV---GNEDVIKTIYG 224 Query: 61 EGYRFC 66 GYR Sbjct: 225 VGYRLE 230 >UniRef50_A8VQC0 Response regulator receiver protein n=2 Tax=Bacillaceae RepID=A8VQC0_9BACI Length = 240 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++H ++P ++ SR EL++ + G + DR VD+ ++RIR+ D I TI GE Sbjct: 173 LIHLAKHPNRVWSRDELIEHVWGWDYTGSDRAVDLAVKRIRQALRKWDDEHGGIRTIRGE 232 Query: 62 GYRFCG 67 GY F Sbjct: 233 GYSFHA 238 >UniRef50_B1HXG4 DNA-binding response regulator n=2 Tax=Bacillaceae RepID=B1HXG4_LYSSC Length = 223 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ +R+ +++++ G + ++T++ ++R+R+ EII T+ G Sbjct: 157 LALLASRPNQVFTRSYIMEQVWGYDYDGDEQTLNTHVKRVRERLNRFDTAVEII-TVRGV 215 Query: 62 GYRFCG 67 GY+ Sbjct: 216 GYKLEA 221 >UniRef50_C4ZFF8 DNA-binding response regulator n=60 Tax=Bacteria RepID=C4ZFF8_EUBR3 Length = 248 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + G + S EL + E + T+ V IR +R+ T DTP+ I TI Sbjct: 183 ILHVLLSSAGNVVSIEELFHAVWKDEYYSKNSSTITVHIRHLREKLNDTSDTPQYIKTIW 242 Query: 60 GEGYR 64 G GY+ Sbjct: 243 GVGYK 247 >UniRef50_A8F5U3 Two component transcriptional regulator, winged helix family n=1 Tax=Thermotoga lettingae TMO RepID=A8F5U3_THELT Length = 228 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NPG + SR E+++K+ E +DV I +R + I T+ G Sbjct: 163 LELFLRNPGIVFSREEIMEKVWENEKIIKSNVIDVYILYLRNKLKPYGYD-RYIQTVPGY 221 Query: 62 GYRFCGD 68 GYRFC + Sbjct: 222 GYRFCEE 228 >UniRef50_B2IER4 Two component transcriptional regulator, winged helix family n=9 Tax=Proteobacteria RepID=B2IER4_BEII9 Length = 277 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG+ +RA LL+ + P VDV I ++RK P ++I ++ G Sbjct: 213 LEYLMRRPGQTVTRAMLLEDVWNYNFLPQTNLVDVHIGKLRKKI-DQPGEVQMIESVRGA 271 Query: 62 GYRFC 66 G+R Sbjct: 272 GFRLN 276 >UniRef50_B4U9M6 Two component transcriptional regulator, winged helix family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9M6_HYDS0 Length = 225 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP K R LL K+ G VDV I+ IR E P P++I TI G Sbjct: 159 LKVLAQNPNKTIRREVLLNKVWGIASDYDSNIVDVYIKNIRNKLEDKP--PKLILTIRGR 216 Query: 62 GYRFCGD 68 GY + Sbjct: 217 GYMLSTE 223 >UniRef50_A1R850 DNA-binding response regulator n=45 Tax=Actinobacteria (class) RepID=A1R850_ARTAT Length = 253 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ +R LL+++ G R V+V ++R+R E P+ PE++ T+ G Sbjct: 188 LVALARKPWQVFTRELLLEQVWGYRHAADTRLVNVHVQRLRSKIERDPEAPEVVLTVRGV 247 Query: 62 GYR 64 GY+ Sbjct: 248 GYK 250 >UniRef50_A4CE30 Probable two-component response regulator transcription regulator protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CE30_9GAMM Length = 227 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 28/66 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK SR +L + G E+ P VDV I ++RK +I T G Sbjct: 159 ILELLMTNTGKYLSRERILSNVWGMEMDPMTNVVDVYIGKLRKKLTIESKGESMIETKRG 218 Query: 61 EGYRFC 66 GYR Sbjct: 219 IGYRLN 224 >UniRef50_Q398T9 Two component transcriptional regulator, winged helix family n=23 Tax=Proteobacteria RepID=Q398T9_BURS3 Length = 395 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P + SR LL + GR+ DR+VDV I R+R+ E P P I T+ G Sbjct: 326 LHALGSSPNRAVSRENLLARARGRDHAALDRSVDVQILRLRQIVEDDPGKPRFIKTVWGI 385 Query: 62 GYRFCGDLE 70 GY ++ Sbjct: 386 GYMLVAGVD 394 >UniRef50_Q46TX9 Response regulator receiver:Transcriptional regulatory protein, C-terminal n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46TX9_RALEJ Length = 231 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +PG I S++ L + + ++ T++V + R+R+ +I T+ G Sbjct: 164 VLDYLMHHPGAIVSKSTLTEHIYAQDFDRDSNTIEVFVGRLRRKLGVD-----VIETVRG 218 Query: 61 EGYRFCGDL 69 +GYR Sbjct: 219 QGYRLRPPP 227 >UniRef50_A9AXT6 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXT6_HERA2 Length = 231 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P K+ + LL+ + G + + + V I R+R+ E+ P P + T G Sbjct: 166 LAYLITHPNKVLTHRMLLQHVWGDQYRDEAEYLRVYIGRLRRKLEADPSNPRHLLTEAGI 225 Query: 62 GYRFCG 67 GYRF Sbjct: 226 GYRFVS 231 >UniRef50_A3WKN2 Response regulator (CheY,wHTH domains) n=1 Tax=Idiomarina baltica OS145 RepID=A3WKN2_9GAMM Length = 225 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ S+ +L GR++ P DR++DV I IRK P PE I T+ G Sbjct: 161 ILRCLMQQAGQMVSKDQLSVAALGRKMGPFDRSLDVHISNIRKKL---PANPERIQTVRG 217 Query: 61 EGYRFCGD 68 GYR + Sbjct: 218 RGYRLVNE 225 >UniRef50_Q44929 Response regulator gtcR n=8 Tax=Firmicutes RepID=GTCR_ANEMI Length = 242 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%) Query: 12 IQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLE 70 I ++ +L ++ D T+ V I R+R E P P I T+ G GY+F + Sbjct: 178 IFTKQQLFEQAWSETYWEDDNTIMVQISRLRDKIEDQPRQPVYIKTVRGLGYKFASKDD 236 >UniRef50_A4G2G5 Phosphate regulon transcriptional regulatory protein PhoB n=3 Tax=Oxalobacteraceae RepID=A4G2G5_HERAR Length = 229 Score = 85.6 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P + SR +L+ ++ GR + +RTVDV + R+RK +I T+ G Sbjct: 166 LKYLLAHPNHVYSRDQLIDRVWGRHIAIDERTVDVNVLRLRKVLGE---GRYLIKTVRGV 222 Query: 62 GYRFC 66 GY Sbjct: 223 GYMLT 227 >UniRef50_B7QTW7 Two-component response regulator n=1 Tax=Ruegeria sp. R11 RepID=B7QTW7_9RHOB Length = 225 Score = 85.2 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+IQ+RA LL+++ +P V+ + R+R E P E I TI G Sbjct: 161 LEVLMRSKGRIQTRAMLLERVWDINFEPSTSVVETHMSRLRNKIEK-PFDAEYIRTIRGS 219 Query: 62 GYRFC 66 GY F Sbjct: 220 GYMFI 224 >UniRef50_C7LZ74 Two component transcriptional regulator, winged helix family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ74_ACIFD Length = 225 Score = 85.2 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F +P +R ELL + G E DRTVDV + ++RK I+T+ G Sbjct: 161 LGYFFAHPATALTRRELLDGVWGPEWYGDDRTVDVHVLQLRKKLGGAIA----ISTVWGV 216 Query: 62 GYRFCGDL 69 GYRF + Sbjct: 217 GYRFDPEE 224 >UniRef50_A8LHM5 Two component transcriptional regulator, winged helix family n=11 Tax=Actinobacteria (class) RepID=A8LHM5_FRASN Length = 270 Score = 85.2 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NP ++ SRA++L + R+ VD + +R+ P +I T G Sbjct: 184 LRYFLHNPNRVLSRAQILAAVWDRDFDGEPTVVDQYVSYLRRKLGQHG--PPLIHTQRGF 241 Query: 62 GYRFC 66 GY Sbjct: 242 GYALR 246 >UniRef50_Q187R8 Two-component response regulator n=6 Tax=Clostridiales RepID=Q187R8_CLOD6 Length = 223 Score = 85.2 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN G+I + ++L + E D V V IRR+R E P P+ I T +G Sbjct: 155 LSYLIENKGQILLKEQILHHIWDSEENYVDDNIVSVNIRRLRVKVEDDPSNPKYIKTAYG 214 Query: 61 EGYRFCGDLE 70 GY + ++E Sbjct: 215 MGYLWN-EVE 223 >UniRef50_A6M2A3 Two component transcriptional regulator, winged helix family n=13 Tax=Clostridium RepID=A6M2A3_CLOB8 Length = 242 Score = 85.2 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G + +R +LL ++ G + RTVDV IRR+R + + I+ T+ G Sbjct: 179 LSYLYKNKGIVFNRQQLLNEVWGYDYYGDTRTVDVHIRRLRANLGDDKEN-SIVETVFGV 237 Query: 62 GY 63 GY Sbjct: 238 GY 239 >UniRef50_A1S1W0 Response regulator receiver protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1W0_SHEAM Length = 237 Score = 85.2 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G+I R +L K TG +RT+D I R+R+ D P I TI G Sbjct: 167 ILAQLAKHAGQIVCREDLFKYTTGAPYDGLNRTMDNRISRLRRKLGDNMDDPFKIKTIWG 226 Query: 61 EGYRFCGDL 69 +GY F D+ Sbjct: 227 KGYLFVPDI 235 >UniRef50_C5CE19 Two component transcriptional regulator, winged helix family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CE19_KOSOT Length = 228 Score = 85.2 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NPG + SR ++L K+ +P VDV + +RK + + I T+H Sbjct: 159 LELFMRNPGVVFSREQILDKLWESGFEPRSNIVDVYVLYLRKKLKPFGYDEK-IETVHNI 217 Query: 62 GYRFCGDLE 70 GYR + + Sbjct: 218 GYRLKKEDD 226 >UniRef50_A7GB96 DNA-binding response regulator n=16 Tax=Bacteria RepID=A7GB96_CLOBL Length = 232 Score = 85.2 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F ENP + S ++L ++ E + T+ V IRR+R E P P+ I T+ Sbjct: 160 LCMFMENPDIVLSPEQILSRLWDCNENYIDNNTLTVYIRRLRTKIEDNPGEPQKIVTVRR 219 Query: 61 EGYRFCG 67 GY++ Sbjct: 220 MGYKWST 226 >UniRef50_Q3MGM2 Sensor protein n=22 Tax=Bacteria RepID=Q3MGM2_ANAVT Length = 1629 Score = 85.2 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 32/70 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + ++ S + +L+ + E P + V I+ +R + +++ T++G Sbjct: 158 LELFLRHSRRVFSCSMILEHIWSYEDTPGEEAVRTHIKGLRMKLRNAGAPGDLVETVYGI 217 Query: 62 GYRFCGDLED 71 GYR E+ Sbjct: 218 GYRLKAQEEE 227 >UniRef50_B4WP26 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WP26_9SYNE Length = 676 Score = 85.2 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP + SR ++ + P + TV ++ +R+ + ++I T++G Sbjct: 159 LELFLRNPAQAFSREAIIDNLWSYSDAPGEETVTSHMKGLRRKLRTVGAPADLIETVYGV 218 Query: 62 GYRFCG 67 GYR Sbjct: 219 GYRLKP 224 >UniRef50_C4Z360 Two-component system, OmpR family, response regulator ResD n=12 Tax=Bacteria RepID=C4Z360_EUBE2 Length = 220 Score = 85.2 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +N G++ S+ ++L+ + G + + +D T+ I+ IR F P I T+ G Sbjct: 156 ICEFLAKNRGQVFSKEQILEAVFGFDNESNDSTIITHIKNIRAKFADYDYMP--IKTVWG 213 Query: 61 EGYRFC 66 GY++ Sbjct: 214 IGYKWE 219 >UniRef50_A6VT30 Two component transcriptional regulator, winged helix family n=26 Tax=Gammaproteobacteria RepID=A6VT30_MARMS Length = 245 Score = 85.2 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP K SR E+ + + G E DR++D I +RK + P I T+ G+ Sbjct: 173 LWLLASNPEKTVSRDEISQSLRGIEYDGLDRSIDNKIVSLRKKLGDSNGLPRRIITVRGK 232 Query: 62 GYRFCGD 68 GY F D Sbjct: 233 GYLFITD 239 >UniRef50_B1XLL2 Two-component response regulator n=3 Tax=Synechococcus RepID=B1XLL2_SYNP2 Length = 249 Score = 85.2 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ S +E+LK++ G + T+ V +R +R E P P+ I T++G Sbjct: 166 LHCLLQRHGQTISPSEILKEVWGYDPSDDIETIRVHVRHLRTKLEPEPRRPQYIKTVYGA 225 Query: 62 GYRFCGDLE 70 GY Sbjct: 226 GYCLELPSR 234 >UniRef50_C7R7C9 Two component transcriptional regulator, winged helix family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7C9_KANKD Length = 236 Score = 85.2 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 32/63 (50%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 F NPG++ SR LLKK+ G + RTVD I +RK D+ I T++ GY Sbjct: 165 LFLRNPGRLYSRKFLLKKVWGIDCDISTRTVDAHISSLRKKLNIKGDSLYRIKTVYQHGY 224 Query: 64 RFC 66 R Sbjct: 225 RLE 227 >UniRef50_Q3B3K7 Two component transcriptional regulator, winged helix family n=9 Tax=Bacteroidetes/Chlorobi group RepID=Q3B3K7_PELLD Length = 232 Score = 85.2 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N ++ +R+ +++ + +DV + +R+ E+ T +I T+ G Sbjct: 157 LEYLLRNLDRVCTRSRIIEHVWDIHFDADTSVIDVYVNFLRRKLEAAGCTG-LIKTVRGV 215 Query: 62 GYRFCGDLED 71 GY + Sbjct: 216 GYVIRTPEAN 225 >UniRef50_B6JIF2 DNA-binding response regulator OmpR n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JIF2_OLICO Length = 241 Score = 85.2 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ +R ++L + R P DR++DV I ++R+ +II T+ G Sbjct: 170 LAALVQRAGRVLTRDQILDLIANRHWTPFDRSIDVLIGKLRRKLNDNNRANQIIKTVRGA 229 Query: 62 GYRFCGDLE 70 GY F E Sbjct: 230 GYVFTLSPE 238 >UniRef50_B8FS42 Two component transcriptional regulator, winged helix family n=5 Tax=Clostridiales RepID=B8FS42_DESHD Length = 228 Score = 85.2 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G+ +RA+L+ + + + VT+ R+R E P +P I T++G Sbjct: 161 LRLLLENRGQTLTRAQLVDAIWTEGAEYVDENALSVTVNRLRNKLEDLPSSPRFIKTVYG 220 Query: 61 EGYRFCGD 68 GY + Sbjct: 221 IGYTWAVP 228 >UniRef50_UPI0000164CF1 response regulator n=1 Tax=Deinococcus radiodurans R1 RepID=UPI0000164CF1 Length = 243 Score = 85.2 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ +R EL+ ++ VD +R +R+ E++ T+ G Sbjct: 181 LEVLASHPGRVYTRDELIDRVWDGRFDAESNVVDTYVRNLRRKLGD-----EVVQTMRGV 235 Query: 62 GYRF 65 GY F Sbjct: 236 GYSF 239 >UniRef50_Q2G7V2 Two component transcriptional regulator, winged helix family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G7V2_NOVAD Length = 227 Score = 85.2 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+PG + SR E+L+ + G E P V+V + R+R+ + P ++ + G Sbjct: 163 VLRLLMESPGTVISRTEILRAVWGMEDDPLTNIVEVYLSRLRRKLHALG--PPVVENVRG 220 Query: 61 EGYRFCG 67 GYR Sbjct: 221 FGYRLIA 227 >UniRef50_Q0TP36 DNA-binding response regulator n=142 Tax=Bacteria RepID=Q0TP36_CLOP1 Length = 223 Score = 85.2 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ N G SR +L + G + RTVD I+R+R+ IAT+ G Sbjct: 160 LIYLSSNEGIALSRDRILDNVWGYDYFGDIRTVDTNIKRLREKLLD---KANYIATVRGS 216 Query: 62 GYRFC 66 GY+F Sbjct: 217 GYKFE 221 >UniRef50_B6IQC2 Cell cycle transcriptional regulator, putative n=3 Tax=Alphaproteobacteria RepID=B6IQC2_RHOCS Length = 256 Score = 85.2 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 N G++ S+ ++ + + G P D+ +DV I ++RK I T++ Sbjct: 158 IFSVLALNVGRVVSKEKIYETVYGLTGSDPLDKVIDVYICKLRKKLAEATGGDRYIETVY 217 Query: 60 GEGYRFCGDLED 71 G GY+F E+ Sbjct: 218 GRGYKFEAPSEE 229 >UniRef50_UPI0001973D88 response regulator DrrA n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973D88 Length = 162 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 NP ++ + LL + + + R ++ I +RK PD P+ + +++ Sbjct: 95 IFALLILNPKRVFTYEMLLDLVWHEDYSYYSRKAINNHISNLRKKLRVAPDLPDYVKSVY 154 Query: 60 GEGYRFC 66 G GY+F Sbjct: 155 GVGYKFE 161 >UniRef50_D2QX61 Two component transcriptional regulator, winged helix family n=3 Tax=Planctomycetaceae RepID=D2QX61_9PLAN Length = 223 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ +R L + + + + V+V I R+R + P +I T+ G Sbjct: 158 LEFLMRYAGQVVTRKMLCEHLWESDWEGVTNVVEVHINRLRGKIDRGFSEP-LIQTVRGR 216 Query: 62 GYRFCG 67 GY Sbjct: 217 GYVLRT 222 >UniRef50_C6I3R1 Two-component system response regulator n=20 Tax=Bacteroidales RepID=C6I3R1_9BACE Length = 229 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G++ SR ++L ++ E+ DRT+DV I R+RK + + I T G Sbjct: 165 ILFLLLQNKGRVFSREDILSRIWSDEVYVLDRTIDVNITRLRKKIGTYG---KRIVTRLG 221 Query: 61 EGYRFCGD 68 GY F + Sbjct: 222 YGYCFETE 229 >UniRef50_D1AFR9 Two component transcriptional regulator, winged helix family n=4 Tax=Fusobacteriaceae RepID=D1AFR9_SEBTE Length = 221 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N GK+ +R LL ++ G + +R VD I+R RK ++I T+ G Sbjct: 156 LDYIIKNKGKLLTRDMLLNEVWGYDFDGDNRVVDTLIKRTRKKLSPYG---DLIKTVRGM 212 Query: 62 GYRFC 66 GY F Sbjct: 213 GYMFD 217 >UniRef50_Q97FK2 Response regulator (CheY-like receiver domain and HTH-type DNA-binding) n=2 Tax=Clostridium RepID=Q97FK2_CLOAB Length = 225 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP K+ ++ + + + E +R V V + +R + I T+ G Sbjct: 161 ILELLISNPKKVFTKQNIFESVWSEEYILDERVVTVHVSNLRNKLK---HGDTYIKTVWG 217 Query: 61 EGYRF 65 GY+ Sbjct: 218 IGYKM 222 >UniRef50_C0Z621 Two-component response regulator n=5 Tax=Firmicutes RepID=C0Z621_BREBN Length = 239 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G + +R ++ ++ G TV V I+ +R+ E + I T G Sbjct: 175 LTFLAENAGIVFTREQIYDRVWGYGY-GSLNTVTVHIKNLREKLE---TERQFIKTQWGT 230 Query: 62 GYRFCGD 68 GY F G+ Sbjct: 231 GYVFIGE 237 >UniRef50_Q04942 Transcriptional regulatory protein afsQ1 n=34 Tax=Actinomycetales RepID=AFSQ1_STRCO Length = 225 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 31/60 (51%) Query: 9 PGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGD 68 PG+ SR +LL+ + + R VD ++R+R E P +P +I T+ G GYR Sbjct: 165 PGQALSRQQLLRLVWEHDYLGDSRLVDACVQRLRAKVEDVPSSPTLIRTVRGVGYRLDPP 224 >UniRef50_B1ZVS5 Two component transcriptional regulator, winged helix family n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B1ZVS5_OPITP Length = 228 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G+ ++ +L+ + P VDV + R+R + I T+ G Sbjct: 164 LEYLLRHAGRPVTKVMILEHVWDYSFDPQTNVVDVLMSRLRSKIDPD---KTRIETLRGV 220 Query: 62 GYRFCG 67 GY F Sbjct: 221 GYVFKA 226 >UniRef50_A4X7Q0 Response regulator receiver n=46 Tax=Actinomycetales RepID=A4X7Q0_SALTO Length = 334 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 32/62 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E G++ SR EL+ ++ + ++T+DV I +R+ T P ++ T+ G Sbjct: 266 VLTYLAERVGQVVSRRELMTEVWRQARIGEEQTIDVHISWLRRKLGETAAKPRLLHTVRG 325 Query: 61 EG 62 G Sbjct: 326 VG 327 >UniRef50_C9Y9A3 Transcriptional regulatory protein ompR n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9A3_9BURK Length = 274 Score = 84.8 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 38/65 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + P ++ SR +L+++ GR + +R++D+ + R+R+ PD P +I T+ G Sbjct: 198 LNTFLQTPRRLFSRDQLMEQARGRAMDAFERSIDLLVSRLRQKLADDPDEPSMIKTVRGA 257 Query: 62 GYRFC 66 GY F Sbjct: 258 GYMFN 262 >UniRef50_C8WIG3 Two component transcriptional regulator, winged helix family n=36 Tax=Bacteria RepID=C8WIG3_EGGLE Length = 248 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+I + L + G ++ ++ IRR+R+ E+ P P + T G Sbjct: 181 ILSVLARNAGRIVTIDSLCEACWG-TSFGYENSLMAHIRRLREKIEADPSAPVSLVTARG 239 Query: 61 EGYRFC 66 GY+ Sbjct: 240 LGYKLV 245 >UniRef50_B8IM29 Two component transcriptional regulator, winged helix family n=16 Tax=Proteobacteria RepID=B8IM29_METNO Length = 251 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 37/68 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C PG++ SR +LL GR P +R++DV + RIR+ E PE+I TI Sbjct: 181 LHAMCLRPGRVLSRDQLLDLTQGRAPGPFERSIDVLVSRIRQKIERDSRNPEMIKTIRSG 240 Query: 62 GYRFCGDL 69 GY F ++ Sbjct: 241 GYVFTPEV 248 >UniRef50_D1VT63 Regulatory protein VanR n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT63_9FIRM Length = 233 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP K+ S + + + E +TV V IRRIR+ E P P I G Sbjct: 163 ILEFLMKNPNKVFSIESIYEHVWN-EPAIEAKTVTVHIRRIREKIEVDPKRPMYIQVAWG 221 Query: 61 EGYRFCGDLE 70 GY+F + Sbjct: 222 LGYKFVDNKR 231 >UniRef50_A7BVU1 DNA-binding response regulator PhoB n=1 Tax=Beggiatoa sp. PS RepID=A7BVU1_9GAMM Length = 130 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + ++ SR++LL + G + +RTVDV I R+RK ++ ++ T+ G Sbjct: 59 LKFFMSHINRVYSRSQLLDFVWGENVFIEERTVDVHILRLRKILKTYDAD-NMLQTVRGI 117 Query: 62 GYRFCGDLED 71 GYRF DL + Sbjct: 118 GYRFSTDLTN 127 >UniRef50_Q631U4 Response regulator n=1 Tax=Bacillus cereus E33L RepID=Q631U4_BACCZ Length = 229 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 30/66 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ ++ +L +K+ G + + TV I++IR I T+ G Sbjct: 161 VVKMLALHAGQVLTKEQLFEKIWGYDSESDVSTVVEHIKKIRTKLSVYDREYTYIQTVWG 220 Query: 61 EGYRFC 66 GY++ Sbjct: 221 IGYKWS 226 >UniRef50_B3QUP3 Two component transcriptional regulator, winged helix family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUP3_CHLT3 Length = 227 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N GK+ SR LL+++ G + DRTVDV I ++R+ + I TI G Sbjct: 164 LWILATNKGKVFSREMLLRRVWGENIYVTDRTVDVHICKVRQRLGKFGEDA--IETIKGV 221 Query: 62 GYRF 65 GYR Sbjct: 222 GYRL 225 >UniRef50_C7RUD8 Two component transcriptional regulator, winged helix family n=16 Tax=Proteobacteria RepID=C7RUD8_9PROT Length = 235 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + NP + + +LLK + G V V + +RK E P P+ + T G Sbjct: 164 LSYLIANPDCVLTHRQLLKNVWGPGHVEDSHYVRVYMGNLRKKIEDDPARPKHLRTEAGV 223 Query: 62 GYRFCG 67 GYRF G Sbjct: 224 GYRFVG 229 >UniRef50_A9AWE4 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWE4_HERA2 Length = 975 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + G++ + LL+++ G+ + IRR+R E P P++I + G Sbjct: 165 LKLFIQYHGQVLTHRMLLQQVWGKSYSEDRAYLHAYIRRLRAKLEDDPTNPQLIHSESGI 224 Query: 62 GYRF 65 GYRF Sbjct: 225 GYRF 228 >UniRef50_B6BWN6 Two component transcriptional regulator, winged helix family n=1 Tax=beta proteobacterium KB13 RepID=B6BWN6_9PROT Length = 237 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 37/65 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F EN + SR ++++ G+EL DR++DV I RIRK E P+ P+ + T G Sbjct: 168 LKVFIENANQPLSRDQIMQLAKGKELDVFDRSIDVQISRIRKLIEEDPNKPKYLKTKWGF 227 Query: 62 GYRFC 66 GY F Sbjct: 228 GYVFE 232 >UniRef50_C6J181 Two-component system response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J181_9BACL Length = 225 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ +R L+ ++ G + + ++V + +R E+ P +I T+ G Sbjct: 161 LCFFMKHPQQVLTRELLMDRVWGFDFRGESNVLEVYVGYLRSKLEAQN-EPRLIHTVRGA 219 Query: 62 GYRFC 66 GY Sbjct: 220 GYVLR 224 >UniRef50_C7N3P4 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=4 Tax=Bacteria RepID=C7N3P4_SLAHD Length = 235 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G I + +L + + G + + V +RR+R+ E P P+ I T+ G Sbjct: 167 LSRLVRSRGSIVTSDDLAQAVWG-TSFGYANALMVHVRRLREKIEDDPSDPQWILTVRGL 225 Query: 62 GYRFCGD 68 GYR D Sbjct: 226 GYRLAKD 232 >UniRef50_B0G6B9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6B9_9FIRM Length = 133 Score = 84.8 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ ++ ++ + + D V ++ +RK E P+ P I TI G Sbjct: 68 LFYLALSPNRVFTKEQIYQHIYEDVESEVDNRVYGLVKNLRKKIEENPEEPHYIETIRGV 127 Query: 62 GYRFCG 67 GYRF Sbjct: 128 GYRFRA 133 >UniRef50_C6D3C2 Two component transcriptional regulator, winged helix family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6D3C2_PAESJ Length = 225 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG++ SR EL++ + + + DRTVDV I+R+R+ F + I T+ G Sbjct: 158 LAQLAQYPGRLFSREELIRLVWAADFEGDDRTVDVHIKRLRQRFADYAEDFT-IQTVRGI 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_P23620 Phosphate regulon transcriptional regulatory protein phoB n=218 Tax=Proteobacteria RepID=PHOB_PSEAE Length = 229 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + + +R +LL ++ G + +RTVDV IRR+RK + ++ T+ G Sbjct: 164 LQFFMTHQERAYTRGQLLDQVWGGNVYVEERTVDVHIRRLRKALGEVYEN--LVQTVRGT 221 Query: 62 GYRFCG 67 GYRF Sbjct: 222 GYRFST 227 >UniRef50_A9FZS4 Response regulator n=2 Tax=Myxococcales RepID=A9FZS4_SORC5 Length = 270 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 37/58 (63%) Query: 10 GKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 G+ SR E+L+K+ G E P +RTVD I ++RK E +PD PE I T++G GY+ Sbjct: 213 GQPVSREEILQKIWGIEAGPSNRTVDNFIVKLRKKIERSPDKPEHILTVYGFGYKLAP 270 >UniRef50_D1CGU9 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGU9_THET1 Length = 233 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK+ + LL+++ G E + TI +IR+ P P I T G Sbjct: 165 VLKCLAVHGGKVVTHRMLLREVWGSEQPADTSNLRYTITQIRRKLGDDPTHPRYILTEPG 224 Query: 61 EGYRF 65 GYR Sbjct: 225 VGYRL 229 >UniRef50_C7MP89 Response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MP89_CRYCD Length = 243 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 6 CENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 + G+ + ++ + + P T+ V IR +RK E+ P P +I T+ G+GYR Sbjct: 182 ASHRGQTLTARKIYESIWDDAYLPQSSNTIMVHIRNLRKKLENDPRNPVVIQTVWGKGYR 241 >UniRef50_C8UTJ5 Two-component response regulator n=9 Tax=Lactobacillus RepID=C8UTJ5_LACRG Length = 227 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ +++L + + G D T++V I +R P+ I +I G Sbjct: 163 LALMMRDPHQVFDKSQLYEHVWGEPFLNADNTLNVHISNLRTKINELAHDPKYIISIWGI 222 Query: 62 GYRFC 66 G R Sbjct: 223 GVRLI 227 >UniRef50_C1IA20 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IA20_9CLOT Length = 233 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C+N K+ SR +LL + G + RTVDV I R+RK + + I TI G Sbjct: 165 LTFLCKNTNKVHSRNQLLDLIWGYDFLGDTRTVDVHITRLRKKLKDNFN----IETIFGV 220 Query: 62 GYRF 65 GY Sbjct: 221 GYML 224 >UniRef50_C9RQT3 Two component transcriptional regulator, winged helix family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQT3_FIBSS Length = 242 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE--LKPHDRTVDVTIRRIRKHFESTPDTPEIIATI 58 + + N R+ELL+K+ G E RTVD+ I ++RK E P P+++ T Sbjct: 166 ILEYLWNNRDHAIPRSELLRKVWGYENAESVDTRTVDIHITKLRKKIEDDPAHPKLLVTF 225 Query: 59 HGEGYRFCGDLE 70 GEGY+ E Sbjct: 226 RGEGYQMRSAPE 237 >UniRef50_Q2W608 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W608_MAGSA Length = 228 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + + +LK + G + V + ++R+ E P P +I T G Sbjct: 159 LAFFARHPDHVLTHKHILKGVWGPAHVDDTAYLRVYVNQLRQKLEDDPARPRLIVTDPGV 218 Query: 62 GYRFCGDLE 70 GYR D + Sbjct: 219 GYRLRSDPQ 227 >UniRef50_B5EH76 Two component transcriptional regulator, winged helix family n=9 Tax=Bacteria RepID=B5EH76_GEOBB Length = 246 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ + +++LK++ G + V IR +R+ E P P I T G Sbjct: 180 LRLLVTHAGRVLTHSQILKQIWGVAYVEQQNVLRVNIRNLRQKIEPDPSRPFYITTEVGV 239 Query: 62 GYRFCGD 68 GYR + Sbjct: 240 GYRLRSE 246 >UniRef50_P50351 Transcriptional regulatory protein chvI n=188 Tax=cellular organisms RepID=CHVI_RHISN Length = 241 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 36/66 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG ++SR L+ ++ DRT+D I+R+RK F+ ++I T++G Sbjct: 173 ILHSLAQRPGVVKSRDALMDAAYDEQVYVDDRTIDSHIKRLRKKFKMVDVDFDMIETLYG 232 Query: 61 EGYRFC 66 GYRF Sbjct: 233 VGYRFR 238 >UniRef50_B6IYL9 Two-component response regulator GltR n=1 Tax=Rhodospirillum centenum SW RepID=B6IYL9_RHOCS Length = 262 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E G++ SR +LL G DR+VDV I R+R+ + PD P +I T+ Sbjct: 192 LLALVERAGRVLSRDQLLDVTHGHNTPAFDRSVDVQIARLRRKIQRDPDAPPVIRTVRNA 251 Query: 62 GYRFCGDL 69 GY F + Sbjct: 252 GYLFAARV 259 >UniRef50_C3XKF1 DNA-binding response regulator n=4 Tax=Campylobacterales RepID=C3XKF1_9HELI Length = 222 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK SR L + + R++D IR +R TP+ I ++ G Sbjct: 156 ILNLLFLHKGKPFSRNSLSQAIASIAPDSSLRSIDTHIRNLRAKLGDDAKTPKYIQSVWG 215 Query: 61 EGYRFC 66 GY+FC Sbjct: 216 IGYKFC 221 >UniRef50_A6LA64 Two-component system response regulator n=12 Tax=Bacteroidales RepID=A6LA64_PARD8 Length = 228 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G + SR E+L ++ E+ DRT+DV I R+RK I T G Sbjct: 165 ILKLLLENKGNVFSREEILSRIWKDEVYVLDRTIDVNITRLRKKIGPYGKN---IVTRLG 221 Query: 61 EGYRFC 66 GY F Sbjct: 222 FGYCFE 227 >UniRef50_A3ERN0 Putative two component transcriptional regulator, winged helix family n=2 Tax=Leptospirillum sp. Group II RepID=A3ERN0_9BACT Length = 231 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +N G++ R LL + G + + DRTVDV IRR+RK + + T+ Sbjct: 165 LLALVKNSGRVLDRQMLLDLVWGADYEGTDRTVDVHIRRLRKKLGDY---QDRVQTVKQI 221 Query: 62 GYRF 65 GY+F Sbjct: 222 GYKF 225 >UniRef50_Q1IVX4 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=Q1IVX4_DEIGD Length = 225 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGK+ SR E+ +K+ E VDV I +R+ E +I T+ G Sbjct: 161 LELLARNPGKVFSRFEIEEKVW-PEYTGGSNVVDVYIGYLRRKLEE-GGERRLIHTVRGV 218 Query: 62 GYRFCGD 68 GY + Sbjct: 219 GYVLREE 225 >UniRef50_Q63CK0 Response regulator n=95 Tax=Firmicutes RepID=Q63CK0_BACCZ Length = 254 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ SR +L++ + G + + ++RT+DV I R+R+ F+ I TI G Sbjct: 188 LFTLGSKAGRTCSREQLIEDVWGYDFEGNERTLDVHINRLREKFQEEKSKFS-IKTIRGL 246 Query: 62 GYRFC 66 GYR Sbjct: 247 GYRLE 251 >UniRef50_B1ZS16 Two component transcriptional regulator, winged helix family n=3 Tax=Verrucomicrobia RepID=B1ZS16_OPITP Length = 265 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ +R + +K+ +DV +RR+R+ E+ P P +I TI G Sbjct: 202 LELFLQNPRRVLTRTLIAEKVWEASYDLETNLIDVYVRRLRQKLEA-PGQPPLIKTIRGT 260 Query: 62 GYRFC 66 GY+ Sbjct: 261 GYQLS 265 >UniRef50_A5GA68 Two component transcriptional regulator, winged helix family n=8 Tax=Desulfuromonadales RepID=A5GA68_GEOUR Length = 243 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 33/69 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + G+ R LL+ + G RT+D I R+RK+FE P P T+ G Sbjct: 167 LSLFFQKEGEAIPRKTLLESVWGYSSDAETRTLDNFIVRLRKYFEPDPAKPVYFQTVRGV 226 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 227 GYRFSREAR 235 >UniRef50_Q3A1Q2 Two component transcriptional regulator, winged helix family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1Q2_PELCD Length = 240 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G I R + +++ G DR++DV++ R+RK I T+ G+ Sbjct: 171 LTLLAGHAGTILDRDTINRRLRGIPYDGIDRSIDVSVSRLRKKLGDQKGHHSRIKTVWGK 230 Query: 62 GYRFCGD 68 GY F D Sbjct: 231 GYLFVPD 237 >UniRef50_D1A718 Putative two component transcriptional regulator, winged helix family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A718_THECD Length = 220 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ +R +LL+ + +RTVDV I ++R I T+ G Sbjct: 159 LCFLMGRPGRVFTREQLLEAAWEPGVSAGNRTVDVHIAQLRAKLGEASP----IRTVRGV 214 Query: 62 GY 63 GY Sbjct: 215 GY 216 >UniRef50_D0MIF5 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MIF5_RHOM4 Length = 231 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR + +++ G D T+DVT+ +R+ + I T+ G Sbjct: 159 LRFLARHPGEVLSRTRIAEQVWGDPFYVSDNTIDVTVSGLRQKLSEATPALQ-IETVRGV 217 Query: 62 GY--RFCGDLED 71 GY R + Sbjct: 218 GYALRLEPSATE 229 >UniRef50_B4DAQ3 Two component transcriptional regulator, winged helix family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAQ3_9BACT Length = 230 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ ++ +LL+++ P VDV + R+R ++I T+ G Sbjct: 165 LELLVRNRGRALTKMQLLERLWDYSFDPQTNVVDVLVCRLRNKL-DRGFDTKLIHTLRGI 223 Query: 62 GYRFCGD 68 GY F + Sbjct: 224 GYVFRPE 230 >UniRef50_Q3ZVS3 DNA-binding response regulator n=4 Tax=Dehalococcoides RepID=Q3ZVS3_DEHSC Length = 230 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G++ + LL+K+ G E + I +R E P+ P+II T G Sbjct: 163 LALLARNSGQVLTYRMLLEKVWGTEYSGDLNLLKKHIHNLRAKIEVNPEYPKIIVTERGL 222 Query: 62 GYRFC 66 GY Sbjct: 223 GYSLI 227 >UniRef50_A7ZEI3 Transcriptional activator protein CopR n=9 Tax=Bacteria RepID=A7ZEI3_CAMC1 Length = 219 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+I +R ++ + + + +DV I+ IRK E I T G Sbjct: 157 ILEFLMLNKGRILTRDQIKEHVWDFDYTGGSNVIDVLIKNIRKKLGE----CEAIQTKRG 212 Query: 61 EGY 63 GY Sbjct: 213 LGY 215 >UniRef50_B2TI09 Two-component response regulator n=3 Tax=Clostridium botulinum RepID=B2TI09_CLOBB Length = 228 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ NP K+ +R ELL ++ G + K RT+DV I+R+R+ FE P+ I T+ + Sbjct: 164 LVFLINNPNKVFTRKELLDEIWGNDYKSDCRTIDVHIKRLREKFE--PNENYKIITLWRK 221 Query: 62 GYRF 65 GY+F Sbjct: 222 GYKF 225 >UniRef50_A9ANV0 Two component transcriptional regulator, winged helix family n=72 Tax=Proteobacteria RepID=A9ANV0_BURM1 Length = 262 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ SR +L+ ++ G E DRT+D I ++R+ P+ I TI + Sbjct: 193 LWVLVCRAGEVVSRDDLMLQLRGVEFDGLDRTIDGRISKLRRKLRDDASNPQRIKTIRSK 252 Query: 62 GYRFCG 67 GY+F Sbjct: 253 GYQFSK 258 >UniRef50_B7HUH0 DNA-binding response regulator n=65 Tax=Firmicutes RepID=B7HUH0_BACC7 Length = 215 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F + G I +R +LL + G + +RTVD +RR+RK II T G G Sbjct: 153 KCFLSHKGMILTRKKLLDIVWGFDYFGEERTVDTHVRRLRKKVGEN-----IIKTHRGLG 207 Query: 63 YRFCGDLE 70 Y E Sbjct: 208 YSLEEQSE 215 >UniRef50_B2IZ13 Sensor protein n=11 Tax=Cyanobacteria RepID=B2IZ13_NOSP7 Length = 989 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 33/70 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N ++ S +L+ + E P + V I+ +R+ ++ +++ T++G Sbjct: 158 LELFLRNSRRVFSCGMILEHLWSYEDTPQEEAVRTHIKGLRQKLKAVGAPGDLVETVYGI 217 Query: 62 GYRFCGDLED 71 GYR ED Sbjct: 218 GYRLKPLEED 227 >UniRef50_Q99U73 Response regulator arlR n=10 Tax=Firmicutes RepID=ARLR_STAAN Length = 214 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN + R ++L + G + VDV IR +R + ++I T+ G Sbjct: 151 LYLLAENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRD-KMIETVRGV 209 Query: 62 GY 63 GY Sbjct: 210 GY 211 >UniRef50_C7Q501 Two component transcriptional regulator, winged helix family n=2 Tax=Actinomycetales RepID=C7Q501_CATAD Length = 242 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + +R +LL ++ G + + VD + +R+ E+ P ++ T+ G Sbjct: 164 VLEVLVRNAGAVLTRDQLLDRVWGYDFQVRSDAVDTVVSYLRRKLEADDR-PRVLHTVRG 222 Query: 61 EGYRFCGDLE 70 G+ G LE Sbjct: 223 VGFALRGGLE 232 >UniRef50_D2BK97 Two-component system, response regulator n=5 Tax=Lactococcus lactis RepID=D2BK97_LACLK Length = 236 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GKI SR ELL+ G RT+DV I +IRK I T G Sbjct: 172 ILELLAKREGKIVSREELLQHFWGISDTAETRTIDVLISKIRKKL-----NNHYIKTKRG 226 Query: 61 EGYRFCGDL 69 GY F + Sbjct: 227 FGYYFEENE 235 >UniRef50_C3JQ04 Transcriptional regulatory protein n=2 Tax=Rhodococcus erythropolis RepID=C3JQ04_RHOER Length = 223 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L PG++ SR L++ + G + + R VD TI +R ES P P I TI G Sbjct: 156 VLLELSTEPGRVYSRDHLIRNVWGSDHER-TRVVDATILSLRSKLESDPAKPNYIKTIRG 214 Query: 61 EGYRFCG 67 GYRF Sbjct: 215 FGYRFGP 221 >UniRef50_A5ZPI0 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A5ZPI0_9FIRM Length = 231 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+ G + +R+++L ++ G + DRT+D I+ +RK I T+ G Sbjct: 169 LKLLIEHKGLVLTRSQILDELWGYDYPIIDRTIDTYIKNLRKKLRLN-----CIVTVKGI 223 Query: 62 GYRFC 66 GY++ Sbjct: 224 GYKYE 228 >UniRef50_A8LWI8 Two component transcriptional regulator, winged helix family n=3 Tax=Actinomycetales RepID=A8LWI8_SALAI Length = 224 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + GK+ +R +LL + E + + TVDV + +R+ + TP + T+ G Sbjct: 155 LTYLAQRAGKVVTRRQLLDHVWRSEGRSLE-TVDVHVTWLRRKLGESASTPRYLHTVRGV 213 Query: 62 GYRFCGDLE 70 G R + Sbjct: 214 GIRLGAPED 222 >UniRef50_A9H3V0 Two component Transcriptional regulator n=96 Tax=Proteobacteria RepID=A9H3V0_GLUDA Length = 258 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P ++ +R LL+ + P VDV I ++R+ P +I +I G Sbjct: 192 LEYLMRRPNQVLTRTMLLEDVWNYRFIPQTNLVDVHIGKLRRKI-DDPGAQPLIQSIRGT 250 Query: 62 GYRFCGDL 69 G+ Sbjct: 251 GFMLRVPE 258 >UniRef50_A5MZ62 Transcriptional regulator n=27 Tax=Bacteria RepID=A5MZ62_CLOK5 Length = 228 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N SR +L+K+ G + VDV IR +R + I TI G Sbjct: 163 LKYLMVNKDIALSRENILEKVWGYDYLGDTNIVDVYIRYLRSKI-DDKFNKKYIYTIRGL 221 Query: 62 GYRFCGD 68 GY+F + Sbjct: 222 GYQFRYE 228 >UniRef50_Q88HA6 Transcriptional regulatory protein RstA, putative n=5 Tax=Pseudomonas RepID=Q88HA6_PSEPK Length = 279 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 36/65 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ N G++ +R +L+++ G E DR+VDV I ++R+ F+ I T+ G+ Sbjct: 209 LVVLARNAGEVMNRDRILQQLRGIEFNGTDRSVDVAISKLRRKFDDNAGEARKIKTVWGK 268 Query: 62 GYRFC 66 GY F Sbjct: 269 GYLFS 273 >UniRef50_C5AL42 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Burkholderia glumae BGR1 RepID=C5AL42_BURGB Length = 229 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 + ++PG++ SR LL ++ G RTVD + R+RK + + I+G GY Sbjct: 161 YMFQSPGQLLSRDHLLNRVWGVHADVDTRTVDTHVSRLRKKLQLDGSNGWKVIPIYGYGY 220 Query: 64 R 64 R Sbjct: 221 R 221 >UniRef50_B7K2S9 Two component transcriptional regulator, winged helix family n=2 Tax=Cyanothece RepID=B7K2S9_CYAP8 Length = 635 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 34/64 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR ++ ++ + P + T+ I+ +R+ ++ T +I T++G Sbjct: 158 LELFLRHPQRVFSRQVIIDQIWTLDKVPGEETISSHIKALRQKLKAVGMTQNMIKTVYGF 217 Query: 62 GYRF 65 GYR Sbjct: 218 GYRL 221 >UniRef50_UPI0001C37682 two component transcriptional regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37682 Length = 233 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +N ++ + E +K+ E T++V IR +R+ E +P +I TI G Sbjct: 167 LLYMLKNKNRVIPKDEFFEKVWETEYVGDV-TLNVHIRHLREKIEDDAGSPAVIKTIWGV 225 Query: 62 GYRFC 66 G+ Sbjct: 226 GFMLE 230 >UniRef50_B9YAL6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAL6_9FIRM Length = 269 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN K+ SR +++ K+ + + T+ V + R+R+ E + I T G Sbjct: 204 ILQLLLENKNKVVSREKIMLKLWNNDCFVDENTLTVNVNRLRRKMEQLGID-DCIETRKG 262 Query: 61 EGYRFCG 67 GY+ Sbjct: 263 LGYQLHA 269 >UniRef50_Q39SW2 Two component transcriptional regulator, winged helix family n=20 Tax=Bacteria RepID=Q39SW2_GEOMG Length = 233 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + GK+ + +++L+++ G + V I +R+ E P P I T G Sbjct: 165 LRLLVVHAGKVLTHSQILRQIWGVSHLEQPHVLRVNISNLRRKIEMDPSRPRHILTEPGV 224 Query: 62 GYRFCGD 68 GYR D Sbjct: 225 GYRLRSD 231 >UniRef50_A6BKE3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BKE3_9FIRM Length = 221 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G + ++ +L+ + G + D TV VTI R+RK E+ +P + + G Sbjct: 154 LEYLMYNQGNVLTKENILEYVWGLDGQFVVDNTVSVTINRLRKKIETDAGSPIYLKNVFG 213 Query: 61 EGYRFC 66 GY+ Sbjct: 214 LGYKLE 219 >UniRef50_Q6MA20 Putative two-component response regulator phoP n=2 Tax=Parachlamydiaceae RepID=Q6MA20_PARUW Length = 229 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK+ +R +LL + E DR +DV I +RK D I T+ G Sbjct: 164 ILRRLLLNRGKVLTRNQLLDDVQNDEAFIIDRNIDVHIASLRKKLGPNFDG---IETVRG 220 Query: 61 EGYRFCGDL 69 GYRF D Sbjct: 221 VGYRFKDDE 229 >UniRef50_A4J7U5 Two component transcriptional regulator, winged helix family n=89 Tax=Firmicutes RepID=A4J7U5_DESRM Length = 239 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 38/71 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N K SR ++L ++ GR + VDV IRRIR+ E+ P P + + G Sbjct: 166 IIKLFLHNVDKAISRDDILNQIWGRHYIGDLKIVDVNIRRIRQKIENDPSNPATLEKVWG 225 Query: 61 EGYRFCGDLED 71 GYR+ G +E+ Sbjct: 226 YGYRWRGGVEN 236 >UniRef50_C7PP48 Two component transcriptional regulator, winged helix family n=20 Tax=Bacteria RepID=C7PP48_CHIPD Length = 235 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + NP ++ SR E+L+ + G + + + VDV + +RK D P +I T+ G Sbjct: 169 LEYMMRNPKRVLSRMEILENVWGVDFNMNTKVVDVYVNYLRKKVNR-KDQPALIQTVVGM 227 Query: 62 GYRFCGDL 69 GY + Sbjct: 228 GYMLKEEE 235 >UniRef50_A9D5A2 Osmolarity response regulator n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D5A2_9RHIZ Length = 235 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SRA+L+++ GR+ + DR VDV I R+R+ D +I T+ G Sbjct: 167 LAAMVRSRGRPLSRAQLIERALGRDAEVTDRAVDVQIARLRRALGDRADDAGLIKTVWGV 226 Query: 62 GYRFCGD 68 GY D Sbjct: 227 GYVLVSD 233 >UniRef50_B7K6Q7 Two component transcriptional regulator, winged helix family n=7 Tax=Cyanobacteria RepID=B7K6Q7_CYAP7 Length = 241 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHD--RTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +PGK+ SRAEL++K+ R VDV I +IR+ ++ +I T+ Sbjct: 167 LFFLASHPGKVWSRAELIEKVWKVSCSISSDLRVVDVHIGQIRRKIQAVSSRSYLIKTVR 226 Query: 60 GEGYRFC 66 G GY+F Sbjct: 227 GVGYKFE 233 >UniRef50_B5VWD3 Multi-component transcriptional regulator, winged helix family n=2 Tax=Arthrospira RepID=B5VWD3_SPIMA Length = 628 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N + S ++L K+ + P TV I+ +R+ ++ E I T++G Sbjct: 158 LELLMGNRQRTFSIDKILDKLWTFDDPPSANTVRAHIKGLRQKLKAAGAGAEFIETVYGL 217 Query: 62 GYRFCGDLE 70 GYR +LE Sbjct: 218 GYRLNQNLE 226 >UniRef50_A0RL52 DNA-binding response regulator n=93 Tax=Firmicutes RepID=A0RL52_BACAH Length = 241 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F NP ++ R ELL+K+ G E + R VD+ ++R+RK ++ E I TI+G G Sbjct: 180 QLFVSNPQRVFMRDELLEKVWGFEYIGNTRAVDIMVQRLRKKLGNSG---EYIKTIYGVG 236 Query: 63 YRFC 66 Y+ Sbjct: 237 YKLD 240 >UniRef50_D1X187 Two component transcriptional regulator, winged helix family n=4 Tax=Streptomyces RepID=D1X187_9ACTO Length = 236 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P ++ SR LL+++ G + RTVDV + +RK E P PE + T+ G Sbjct: 161 ILAALAAGPDRVFSRQRLLEELHGFDRYISARTVDVHVMNLRKKIERAPRRPERLLTVFG 220 Query: 61 EGYRFCGDLE 70 GY+ + Sbjct: 221 VGYKLTDPAK 230 >UniRef50_B6FMI5 Putative uncharacterized protein n=7 Tax=Clostridiales RepID=B6FMI5_9CLOT Length = 243 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G++ ++ +L+ + G + D TV VTI R+R+ E + I + G Sbjct: 174 LEYLMRNQGQVLTKENILETIWGVDGQFVVDNTVSVTINRLRRKIEPDGERQGYIQNVFG 233 Query: 61 EGYR 64 GYR Sbjct: 234 LGYR 237 >UniRef50_UPI0001C16F99 Multi-component Transcriptional regulator, Winged helix family n=2 Tax=Nostocaceae RepID=UPI0001C16F99 Length = 1329 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N ++ S +L + E P + V I+ +R ++ +++ T++G Sbjct: 158 LELLMRNNRRVFSCGMILDHLWSYEDTPGEDAVRTHIKGLRMKLKAAGAPHDLVETVYGI 217 Query: 62 GYRFCGDLED 71 GYR D Sbjct: 218 GYRLKPQEND 227 >UniRef50_Q2S740 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S740_HAHCH Length = 242 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 36/70 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + SR + +++ E DR++D+ + RIRK P P +I TI GE Sbjct: 170 LYYLARQAGSVISRDLVYREIFNLEYDGLDRSIDLRVSRIRKRLGDDPKQPRLIKTIRGE 229 Query: 62 GYRFCGDLED 71 GY F + ++ Sbjct: 230 GYLFVDNADN 239 >UniRef50_C9XRU4 Two-component system response regulator n=12 Tax=Clostridium RepID=C9XRU4_CLODC Length = 278 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N KI + L +++ G D T+ V IR IR+ E P P+I+ T+ G Sbjct: 210 LSYMAQNVNKIIGKERLYEQVWGVYSSICDNTIMVHIRHIREKIEDNPSNPKILITVKGL 269 Query: 62 GYRFCGDLE 70 GY+ ++ Sbjct: 270 GYKLVNRID 278 >UniRef50_A6TSH7 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiales RepID=A6TSH7_ALKMQ Length = 231 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 29/67 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG+ + EL K+ G + RTV V I IR E + P + G Sbjct: 160 ILSFLMQNPGQYYTPKELYYKIWGAKSYGDPRTVIVHIHNIRNKIEEDVNNPRFLKMEWG 219 Query: 61 EGYRFCG 67 +GY F Sbjct: 220 QGYYFDP 226 >UniRef50_A6M1X5 Two component transcriptional regulator, winged helix family n=8 Tax=Firmicutes RepID=A6M1X5_CLOB8 Length = 229 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G S++ +L+K+ G + D V+V IR +R II T+ G Sbjct: 165 LSFLLMNNGIALSKSLILEKVWGYDFNGEDNIVEVYIRYLRDKIGD--KDHNIIKTVRGV 222 Query: 62 GYRFCGD 68 GY+ Sbjct: 223 GYKMVAQ 229 >UniRef50_C6D0Z2 Two component transcriptional regulator, winged helix family n=4 Tax=Bacillales RepID=C6D0Z2_PAESJ Length = 231 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L G+I +RAELL+ + G + RTVD I+R+RK ++ ++I T+ G Sbjct: 167 LLALLGVRGRIFTRAELLESVWGYDFPGDMRTVDTHIQRLRKKLDAA----DLITTVFGI 222 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 223 GYKFEKRTE 231 >UniRef50_B8I8Q2 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridium RepID=B8I8Q2_CLOCE Length = 231 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 25/69 (36%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S L + + +D +V +R +R I TI G Sbjct: 163 ILRILASNRGRVYSTKMLYEIIWKEPFLENDNSVITHMRNLRDKIGDKVKDSRYIRTIWG 222 Query: 61 EGYRFCGDL 69 GY+ + Sbjct: 223 TGYKIEKED 231 >UniRef50_Q2W3Z2 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=9 Tax=Proteobacteria RepID=Q2W3Z2_MAGSA Length = 278 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ SR +L ++ DR +DV I RIRK E+ P +P +I T++G Sbjct: 208 LTALLRAPKRVLSREQLQGAEPEKDDIAFDRAIDVRISRIRKKIEADPKSPRLIKTVYGA 267 Query: 62 GYRFCGDLE 70 GY F D+ Sbjct: 268 GYLFSADVR 276 >UniRef50_A6T3B9 Two components system response regulator n=48 Tax=Proteobacteria RepID=A6T3B9_JANMA Length = 246 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ +R +LL GR+ P DR++D+ I R+R+ + P I T+ E Sbjct: 172 LRVFLDHPQRVLTRDQLLNLTQGRDADPFDRSIDLLISRLRQRLQDDAREPRYIKTLRSE 231 Query: 62 GYRFCGDLED 71 GY F + + Sbjct: 232 GYVFSAAVGN 241 >UniRef50_D0Z2F0 DNA-binding response regulator n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2F0_LISDA Length = 249 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P SR L K++ G E DRT+D I +RK TP+ I T+ G+ Sbjct: 180 LWLLASSPDAPLSRDFLTKELRGIEYDGIDRTIDNKIVSLRKKLLDDSSTPQRIITVRGK 239 Query: 62 GYRFCGD 68 GY F D Sbjct: 240 GYLFVPD 246 >UniRef50_C8P150 Regulatory protein VanR n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P150_ERYRH Length = 231 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + NPG+I + +L + + TV V IR +RK E P+ P+I+ + Sbjct: 163 ILRLLLGNPGRIYTMEQLFEIVWEDTYFYSCSNTVMVHIRNLRKKVEDEPNKPKIVKNVW 222 Query: 60 GEGY 63 G+GY Sbjct: 223 GKGY 226 >UniRef50_D0LJX0 Two component transcriptional regulator, winged helix family n=43 Tax=Bacteria RepID=D0LJX0_HALO1 Length = 243 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F G++Q+R LL + G E RTVD ++R+R+ + T+ G Sbjct: 173 LYAFISRRGRVQTRDALLSDVWGIEADVTTRTVDTHVKRLREKLGDAG---RYVETLRGV 229 Query: 62 GYRFC 66 GYRF Sbjct: 230 GYRFR 234 >UniRef50_B8HL49 Multi-component transcriptional regulator, winged helix family n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HL49_CYAP4 Length = 652 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR +L++ + + P + +V ++ +R+ ++ + I I+G Sbjct: 158 LELFLRHPGQVFSRGQLVEHLWTFDDPPLEESVKAHVKGLRQKLKAAGA-VDWIENIYGI 216 Query: 62 GYRFCGDLED 71 GYR + Sbjct: 217 GYRLNPPDSE 226 >UniRef50_C1A8B6 OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8B6_GEMAT Length = 245 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ G I SR ELL+++ G + RTVD + +R+ E+ P P + T+ Sbjct: 179 LVALVRRDGAIASREELLREVWGYDDSVVSRTVDTHMAELRRKLETDPSEPRWLLTVRKT 238 Query: 62 GYRFC 66 GYR Sbjct: 239 GYRMA 243 >UniRef50_Q83N47 Two-component system response regulator n=8 Tax=Actinobacteridae RepID=Q83N47_TROWT Length = 251 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NP ++ S++++L + + V+ I IR+ + II T G Sbjct: 186 LRYFMLNPNRVLSKSQILGHVWDYDFDGDSSIVESYISYIRRKLAAYSSE-TIIHTKRGF 244 Query: 62 GY 63 GY Sbjct: 245 GY 246 >UniRef50_Q3ATG7 Two component transcriptional regulator, winged helix family n=12 Tax=Chlorobiaceae RepID=Q3ATG7_CHLCH Length = 253 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + G+ QSR LL + + RT+D I RIR+ + +I T+ G Sbjct: 183 LVALLKRKGEAQSRETLLSDVWDIDKSISTRTIDTHITRIREKLGNYGA---LIKTVRGL 239 Query: 62 GYRFCGDLED 71 GYR ++ Sbjct: 240 GYRLEPQEDE 249 >UniRef50_C3M7Y9 Transcriptional regulator n=27 Tax=Vibrionaceae RepID=C3M7Y9_VIBC3 Length = 223 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +NPG++ R ELL + G + P RTVD I +R+ I T+ G Sbjct: 160 LLMLLQNPGRVYHRDELLNLIWGYQYFPTTRTVDNHILHLRQKLPQLD-----IETLRGV 214 Query: 62 GYRFCG 67 GYR G Sbjct: 215 GYRLKG 220 >UniRef50_C8WPK8 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WPK8_EGGLE Length = 236 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++PG++ R + +++ G E + + V IRRIRK + P+ + T+ G Sbjct: 170 IVAFLSKHPGQVFDRDRIHERVGGWENESDSQVVTEHIRRIRKKLAAAGAEPDPVETVWG 229 Query: 61 EGYRFCG 67 GYR+ Sbjct: 230 MGYRWRA 236 >UniRef50_D2QKB6 Two component transcriptional regulator, winged helix family n=11 Tax=Bacteroidetes RepID=D2QKB6_9SPHI Length = 230 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ SR ++ +K+ +DV + +RK + T ++I T+ G Sbjct: 165 LDYLMRNRGRVVSRVDIAEKVWDIHFDTGTNVIDVYVNFLRKKIDKDFPT-KLIHTVIGM 223 Query: 62 GYRFCGD 68 GY D Sbjct: 224 GYMLKED 230 >UniRef50_B8FY05 Two component transcriptional regulator, winged helix family n=13 Tax=Bacteria RepID=B8FY05_DESHD Length = 231 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 N K+ S E+ + + P + T+ V I+ +R+ E P+ I T+ Sbjct: 165 VFRLLLLNRRKVFSAKEIYEHIWQEPFLPLSNNTIMVHIKNLRRKLEKDVGRPQYIRTVW 224 Query: 60 GEGY 63 G+GY Sbjct: 225 GKGY 228 >UniRef50_A5FVA6 Two component transcriptional regulator, winged helix family n=6 Tax=Bacteria RepID=A5FVA6_ACICJ Length = 244 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ +R LL+ + P V+ + R+R E++ T+ G Sbjct: 179 VLEYLMRHAGRVVTRTMLLEDVWNFHFDPRTSVVESHVSRLRAKL---GAGRELLHTVRG 235 Query: 61 EGYR 64 GYR Sbjct: 236 AGYR 239 >UniRef50_UPI0001C37B2E two component transcriptional regulator n=2 Tax=Clostridiales RepID=UPI0001C37B2E Length = 243 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ EN G++ ++ E L + T+ V IR IR+ E P+ P+II T+ G Sbjct: 176 LLYLLENRGRVVTKEEFLSNVWEDSFIGEG-TLPVHIRHIREKIEINPNEPQIIRTVWGV 234 Query: 62 GY 63 GY Sbjct: 235 GY 236 >UniRef50_Q7UPW2 Two-component response regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UPW2_RHOBA Length = 268 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ENP ++ +R+ELL ++ R VD I R+RK E +P P + T+ Sbjct: 191 LRYFVENPERVINRSELLTQVWEMSGNLQTRAVDQFIARLRKAIEPSPAEPVHLLTVRDA 250 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 251 GYRFVLEPE 259 >UniRef50_C4XS15 OmpR family two-component response regulator n=2 Tax=Desulfovibrio RepID=C4XS15_DESMR Length = 223 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NPGK+ S+ +++ + P VDV + R+R + +++ T+ G Sbjct: 159 LEYFMRNPGKVLSKTMIMEHVWDYHFDPQTNLVDVLVCRLRNKIDRD-YDRKMLHTLRGV 217 Query: 62 GYRF 65 GY Sbjct: 218 GYVL 221 >UniRef50_C8NR68 DNA-binding response regulator n=12 Tax=Bacteria RepID=C8NR68_COREF Length = 224 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+I SRA+LL + P VDV IR +RK + E + TI G Sbjct: 165 LETLMRHPGQILSRAQLLNMVWDMSFDPGSNVVDVYIRALRKKIGT-----EKVETIRGS 219 Query: 62 GYRFC 66 GYR Sbjct: 220 GYRLV 224 >UniRef50_C6WE10 Putative two component transcriptional regulator, winged helix family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WE10_ACTMD Length = 170 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LH CE+P ++ R L+ ++ G RTVDV IRRIR+ I+T+ G Sbjct: 86 LLHLCEHPDRVHRRHALMHRVWGASPVVDTRTVDVHIRRIRRKLGDAA---RFISTVRGV 142 Query: 62 GYRFC 66 GYR Sbjct: 143 GYRLE 147 >UniRef50_B7IIP6 Transcriptional regulatory protein ResD n=34 Tax=Bacteria RepID=B7IIP6_BACC2 Length = 221 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N K+ +R +++K+ G + R +D I+ +RK I TI G Sbjct: 160 ILQLLFQNERKVLTRENIVEKVWGYDYFGETRIIDTHIKNLRKKL-----AIPYIKTIKG 214 Query: 61 EGYR 64 GY+ Sbjct: 215 IGYK 218 >UniRef50_B0S0W9 Two-component response regulator n=9 Tax=Clostridiales RepID=B0S0W9_FINM2 Length = 238 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N GK+ +R ++ K+ G + + RTVDV I +R+ ++ II TI Sbjct: 176 LYYLLSNVGKVLTRENIMTKIWGFDFEGESRTVDVHIATLRQKLKNASS---IIKTIRNL 232 Query: 62 GYR 64 GY+ Sbjct: 233 GYK 235 >UniRef50_UPI0001C4272B hypothetical protein BpOF4_20304 n=2 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4272B Length = 231 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRF 65 NP ++ +R +LL K+ G + +RTVD I+ IR + + II T+ G GY+ Sbjct: 169 NPKQVFNRDQLLLKIWGVDFLGDERTVDSHIKSIRLKLKKEGLSFTIIETVWGVGYKL 226 >UniRef50_Q12RS3 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12RS3_SHEDO Length = 678 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ C+NP + SR EL+ + + ++ I ++RKH E P+ I T+ Sbjct: 34 LVYLCQNPNRAISRDELINTVW-ENRFVSEAAINRAIGQLRKHIEDDTSHPKYIRTVSKV 92 Query: 62 GYRFCGDLE 70 GYR ++ Sbjct: 93 GYRLDAVVQ 101 >UniRef50_C0Z911 Two-component response regulator n=4 Tax=Firmicutes RepID=C0Z911_BREBN Length = 255 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 36/64 (56%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L + + +R +L++++ G + + DR VD+ I+RIR+ E+ P + I T G G Sbjct: 189 LFLAQYKNQTFTREQLIEQVWGMDYEGSDRAVDLAIKRIRRSLENWPTSEGEIRTYRGLG 248 Query: 63 YRFC 66 Y+ C Sbjct: 249 YKLC 252 >UniRef50_A3NL94 DNA-binding response regulator n=27 Tax=pseudomallei group RepID=A3NL94_BURP6 Length = 245 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +RA+LL+ + DR VDV I R+RK E P PE+I T G Sbjct: 173 LAFFLGSPSRVVTRAQLLECTRAFD-DVFDRAVDVQIWRLRKKIEKDPKHPELIRTERGV 231 Query: 62 GYRFCG-DLE 70 GY F ++E Sbjct: 232 GYYFDAKEVE 241 >UniRef50_B9KBQ0 Response regulator n=6 Tax=Thermotogaceae RepID=B9KBQ0_THENN Length = 233 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N ++ ++ EL + + + T+ I+ +RK +II T+ G Sbjct: 167 ILEYLMMNKNRVVTKEELQEHLWSFDDTVFSDTLRSHIKNLRKKI-DRGFKKKIIHTVRG 225 Query: 61 EGY 63 GY Sbjct: 226 IGY 228 >UniRef50_C8VYB2 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYB2_DESAS Length = 236 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK SR LLK+ ++ RTVDV IRRIR+ E + I T G Sbjct: 168 LYFLACQPGKYFSRYFLLKQFWEFDVSNDSRTVDVHIRRIRQKLEILNANQQYIETARGV 227 Query: 62 GYRFC 66 GYRF Sbjct: 228 GYRFI 232 >UniRef50_C4KYM3 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYM3_EXISA Length = 224 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT-PEIIATIH 59 + F ++P ++ +R +L + + RTVD IR IR+ + + T+ Sbjct: 153 ILKLFLQHPNRLFNRLDLFDLVWPYSAESDPRTVDAHIRMIREKLGDAGFPIDDYLKTVW 212 Query: 60 GEGYRFCGD 68 G GYR+ + Sbjct: 213 GRGYRWTEE 221 >UniRef50_B5CLM3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLM3_9FIRM Length = 226 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +N G++ ++ +L+ + G + D +V V + R+RK E+ + P I + G Sbjct: 160 LEYLMKNQGQVLTKENILEHVWGIDGQYVVDNSVSVLVGRLRKKIEAAGERP-YIQNVFG 218 Query: 61 EGYRFCGD 68 GYR + Sbjct: 219 LGYRMEEE 226 >UniRef50_C6PQ36 Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQ36_9CLOT Length = 233 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + SR ++L + + RTVD I+RIRK + ++I T++G Sbjct: 163 LYLLLSNSGTVYSREQILNIIWNMDYAGGTRTVDTHIQRIRKKLGNN--YQDLIQTVYGI 220 Query: 62 GYR 64 GY+ Sbjct: 221 GYK 223 >UniRef50_D1CTN9 Phosphate regulon two component response regulator PhoB (Fragment) n=1 Tax=Sinorhizobium terangae RepID=D1CTN9_SINTE Length = 162 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H P ++ SR EL+ + G + R VDV I RIRK P I T+ GE Sbjct: 89 LQHLIARPRQVFSRDELIAAVWGYNIHVVPRAVDVHISRIRKALNEFG-EPNYIRTVRGE 147 Query: 62 GYRFCGDL 69 GY D+ Sbjct: 148 GYSIDSDI 155 >UniRef50_Q0IAU4 Two-component response regulator n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IAU4_SYNS3 Length = 199 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F +NPG + +R ++ + G+ D +DV IR +RK E P ++I T+ G Sbjct: 136 LVYFLQNPGMVLARKTIMNNVWGQSWTGDDNLLDVYIRYLRKKIER-PKLEKLIQTVRGV 194 Query: 62 GYRF 65 GY Sbjct: 195 GYIL 198 >UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJR7_CELJU Length = 499 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F ++PG++ + +L + ++ D ++ V I +RK P +P I TI G Sbjct: 52 LLMFIDHPGEVLEKERILATIWQGKVVNDD-SLAVAISHLRKALGDNPRSPRYIKTIPGV 110 Query: 62 GYRFC---GDLED 71 GY+F +E+ Sbjct: 111 GYQFIASAAPVEE 123 >UniRef50_C3WHY2 Two-component response regulator n=8 Tax=Fusobacterium RepID=C3WHY2_9FUSO Length = 236 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +N G SR +++ + G + ++ VDV I +RK + I TI G Sbjct: 170 ILEYFMKNKGLSCSREKIIIDVWGYDFDGEEKIVDVYINSLRKKIDLDN---RYIHTIRG 226 Query: 61 EGYRF 65 GY F Sbjct: 227 FGYMF 231 >UniRef50_UPI0001B518F4 two-component system response regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B518F4 Length = 206 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 4/68 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +PG + SR +++ ++ RT+DV + +R+ P I TI Sbjct: 126 LAHLARDPGAVCSRQQIMDQVWDPHFFGPTRTLDVHVAALRRKLGD----PAWIETIRRV 181 Query: 62 GYRFCGDL 69 G+R Sbjct: 182 GFRLRVPD 189 >UniRef50_A5N339 Predicted transcriptional regulator n=4 Tax=Clostridiales RepID=A5N339_CLOK5 Length = 228 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G+I SR +LL+++ D T+ V I R++K I+T G Sbjct: 157 VLRLLMKNAGQIVSREQLLEELWDDVSFVDDNTLTVNITRVKKKLMELGLQ-NCISTKRG 215 Query: 61 EGYRFCG 67 GY F Sbjct: 216 VGYVFDP 222 >UniRef50_B2HJN8 Transcriptional regulatory protein n=15 Tax=Mycobacterium RepID=B2HJN8_MYCMM Length = 266 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + G+ +R L+ ++ G + RTVDV +RR+R + ++ T+ G G Sbjct: 170 HFLVRHAGQAFTRTRLMHEVWGYDCNGRARTVDVHVRRLRAKLGAD--HESMVDTVRGVG 227 Query: 63 YR 64 Y Sbjct: 228 YM 229 >UniRef50_Q1IHU2 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHU2_ACIBL Length = 323 Score = 83.2 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + G++ +R E+ +K+ + D +++ I ++R T P I T+ Sbjct: 80 VLALLLDRAGQVVTREEIQQKLWPADTFVDFDHSLNTAINKLRDVLGDTASNPRFIETLP 139 Query: 60 GEGYRFCGDLE 70 GYRF +E Sbjct: 140 RRGYRFIAPVE 150 >UniRef50_B0RLM8 Transcriptional regulator n=6 Tax=Xanthomonas RepID=B0RLM8_XANCB Length = 1172 Score = 83.2 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ E G++ S +LL + D V TI ++R+ P I TI Sbjct: 106 VLVALAERAGEVISAEQLLIDVWHGSFYG-DNPVHKTIAQLRRKLGDDSRQPRFIETIRK 164 Query: 61 EGYRFCGDL 69 GYR + Sbjct: 165 RGYRLLPKV 173 >UniRef50_A1WWM5 Response regulator receiver protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WWM5_HALHL Length = 160 Score = 83.2 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ +R EL++ + G RTVD +RR+R+ +I T+ G Sbjct: 88 LHFLAAHRHRVVTRDELIRGVWGPRAYLESRTVDAHVRRLRQALRPAGYD-RMIRTVRGV 146 Query: 62 GYRFCG 67 GY Sbjct: 147 GYHLDS 152 >UniRef50_D0MFI7 Putative two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFI7_RHOM4 Length = 265 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG SR E+L + G VDV + +R+ E+ +I TI G Sbjct: 192 LDFLLSRPGVACSRHEILAHVWGITFDTGTNMVDVYMYFLRRKLEAHGLK-NVIRTIRGY 250 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 251 GYRLDLPAE 259 >UniRef50_UPI000185BED4 KDP operon transcriptional regulatory protein KdpE n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BED4 Length = 247 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++ ++ G++ ++ ELLK + G + + + V I ++R E + + T G Sbjct: 178 ILVYLVQHRGELVTKLELLKAVWGDQYEKETNYLRVYISQLRHKIEPQQAHNKYLRTEVG 237 Query: 61 EGYRFCGDLE 70 GYR D E Sbjct: 238 VGYRMVLDEE 247 >UniRef50_Q72TM3 Response regulator n=2 Tax=Leptospira interrogans RepID=Q72TM3_LEPIC Length = 227 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 34/65 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ GK+ ++ ++++ + G K ++ V + +RK E P +PE++ T G Sbjct: 160 LTFLIQHAGKVLTQEQIIRHVWGPFAKNESGSLRVHVASLRKKIELDPSSPELLLTEPGV 219 Query: 62 GYRFC 66 GYR Sbjct: 220 GYRLA 224 >UniRef50_Q2JGV9 Response regulator receiver protein n=1 Tax=Frankia sp. CcI3 RepID=Q2JGV9_FRASC Length = 171 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTG----RELKPHDRTVDVTIRRIRKHFESTPDTPEIIA 56 + F +PG+ SR LL + G E P RTVDV + R+R+ P+ + I Sbjct: 96 VLDFFVRHPGQAYSREALLCSVWGHQVDDESAPDIRTVDVLVTRLRRKLG--PEHRDRIE 153 Query: 57 TIHGEGYRFCG 67 TI GYR+ Sbjct: 154 TIRRVGYRYRP 164 >UniRef50_A0PWB4 Response regulator mprA n=284 Tax=Bacteria RepID=MPRA_MYCUA Length = 232 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ +R+ +L+++ G + ++V + +R+ E+ P +I T+ G Sbjct: 165 LEMLIANPRRVLTRSRILEEVWGFDFPTSGNALEVYVGYLRRKTEAEG-EPRLIHTVRGV 223 Query: 62 GYRFC 66 GY Sbjct: 224 GYVLR 228 >UniRef50_C1F979 DNA-binding response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F979_ACIC5 Length = 234 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SRA LL+++ + VDV + +R+ P +I T+ G Sbjct: 158 LECLMLHRGRPVSRARLLEEVWHESAENGTNIVDVYVNYLRRKLGDEGPAP-LIQTVRGL 216 Query: 62 GY 63 GY Sbjct: 217 GY 218 >UniRef50_C0ET35 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ET35_9FIRM Length = 231 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ++ G I SR ++L + G + R+VD ++++R I T++G Sbjct: 169 LEYFVKHKGMILSRDKILDSVWGFDYIGGYRSVDTLVKKLRAKL---TKEYPYIKTVYGV 225 Query: 62 GYRFC 66 GY F Sbjct: 226 GYCFD 230 >UniRef50_Q2RPG3 Two component transcriptional regulator, winged helix family n=8 Tax=Alphaproteobacteria RepID=Q2RPG3_RHORT Length = 229 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 5/68 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G+ SR++++ + R+ +DV + R+R+ + +I T+ G Sbjct: 157 ILTYLLLRQGQTVSRSDIVDHVYDRDSDRDSNVIDVLVGRLRRKLGA-----PLIHTVRG 211 Query: 61 EGYRFCGD 68 GYR + Sbjct: 212 LGYRLEAE 219 >UniRef50_C0ZIT9 Two-component response regulator n=2 Tax=Bacillales RepID=C0ZIT9_BREBN Length = 226 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P +I +R +LL+ + G + + RT+DV I+R+R+ F +I+T+ G Sbjct: 159 LAQLASFPDRIFTRDQLLELVWGGDTESDSRTIDVHIKRLREKFTE-KTNDFVISTVRGL 217 Query: 62 GYRFC 66 GY+ Sbjct: 218 GYKLE 222 >UniRef50_A7GLY2 Two component transcriptional regulator, winged helix family n=9 Tax=Firmicutes RepID=A7GLY2_BACCN Length = 220 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N K+ +R +++++ G E R +D I+ IRK I T+ G Sbjct: 159 ILQLLLKNKRKVITRENIVERVWGYEPYGETRIIDTHIKNIRKKL-----NTPYIKTVKG 213 Query: 61 EGYR 64 GY+ Sbjct: 214 IGYK 217 >UniRef50_C9Z8Q7 Putative two-component response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z8Q7_STRSW Length = 251 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ENPG++ SR ++ +++ + VD I +R+ + +I T+ G Sbjct: 188 LRYLMENPGRVLSRGQIQERVWNHRDEGSG-VVDTYIYYLRRKLGEPGQS--LIRTVRGV 244 Query: 62 GYRFCG 67 GY+ C Sbjct: 245 GYQLCT 250 >UniRef50_Q47QJ3 Response regulator receiver n=1 Tax=Thermobifida fusca YX RepID=Q47QJ3_THEFY Length = 218 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG + SRAE++ K+ G + RT+ V + +R+ P +I T+ G Sbjct: 152 LRVLIERPGHVVSRAEIMHKVWGYTPESDTRTLGVHMVSLRRKL----ALPSLIETVRGV 207 Query: 62 GYRFCGD 68 GYR + Sbjct: 208 GYRITSE 214 >UniRef50_C1A710 OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A710_GEMAT Length = 205 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L P K +RA LL+ + G RTVD+ + +R+ E P P I T+ Sbjct: 140 LLALVRQPEKALARATLLRDVWGHAPDIQTRTVDLHVVELRRKLERIPSRPRHIRTVWKT 199 Query: 62 GYRFCG 67 GYRF Sbjct: 200 GYRFDP 205 >UniRef50_A7VHB9 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=A7VHB9_9CLOT Length = 236 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + R ++ + G + + RT+D+ I+ +R+ +I T+ Sbjct: 175 LKLLMINAGIVLRREVIMMDVWGTDYEGESRTLDMHIKTLRQKLGDAG---NMIKTVRNV 231 Query: 62 GYRFC 66 GY+ Sbjct: 232 GYKME 236 >UniRef50_B0SY74 Two component transcriptional regulator, winged helix family n=2 Tax=Caulobacter sp. K31 RepID=B0SY74_CAUSK Length = 235 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK+ + +LL + G + + V + ++R+ E+ P TP +I T G Sbjct: 168 VLARLAQARGKVLTHKDLLTAVWGPAHAQDTQYLRVFVGQLRQKLEADPSTPRMILTEPG 227 Query: 61 EGYRFCGD 68 GYRF GD Sbjct: 228 IGYRFIGD 235 >UniRef50_C6J4Z6 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4Z6_9BACL Length = 225 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + GK+ R +L+++ G + VDV IR +RK + +++ TI G Sbjct: 162 LLFLMKRAGKVCGRDLILQQVWGYDFSTGTNVVDVYIRHLRKKI-DKGHSRKLLHTIRGT 220 Query: 62 GYRF 65 GY F Sbjct: 221 GYMF 224 >UniRef50_B1XPE6 Two-component response regulator; transcriptional regulatory protein n=21 Tax=Cyanobacteria RepID=B1XPE6_SYNP2 Length = 267 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SR+ELL++ + + RT+D + +RK E P P +I T+ Sbjct: 161 LYVLAQANGEPLSRSELLRRAW-PDAIDNPRTIDTHVLSLRKKIEQDPRQPNLIQTVRNV 219 Query: 62 GYRFCGD 68 GYRF D Sbjct: 220 GYRFNLD 226 >UniRef50_Q3JG93 Response regulator protein n=61 Tax=Proteobacteria RepID=Q3JG93_BURP1 Length = 288 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L G + SR ++LK++ G E DR+VD I ++R+ FE P I TI G Sbjct: 218 LLILARAAGTVLSRDDILKQLRGIEFDGIDRSVDSGISKLRRRFEDASSEPHKIKTIWGR 277 Query: 62 GYRFCG 67 GY F Sbjct: 278 GYLFSP 283 >UniRef50_B1YLJ6 Two component transcriptional regulator, winged helix family n=2 Tax=Exiguobacterium RepID=B1YLJ6_EXIS2 Length = 219 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F E+ G+ +R ++L ++ G RTVD ++++R P + + T+H Sbjct: 155 LVYFFEHMGEALTRDQILDEVWGYTFGGDTRTVDTHVKQLRDKL---PTIKQQLKTVHRV 211 Query: 62 GYRFCG 67 GYR Sbjct: 212 GYRLEA 217 >UniRef50_C6AWS7 Two component transcriptional regulator, winged helix family n=7 Tax=Rhizobiales RepID=C6AWS7_RHILS Length = 246 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L FC NP K+ +R +LL P +R++D I R+R+ E P I T+ Sbjct: 174 ILLAFCCNPNKVLTREQLLSMTHAGSAGPVERSIDAHISRVRQKIEPNLKDPTFIKTVRL 233 Query: 61 EGYRFCGDLE 70 GY F +E Sbjct: 234 GGYLFASKVE 243 >UniRef50_C4DQ28 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQ28_9ACTO Length = 256 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K+ SRA+LL+++ G E V+ I +R+ P +I T+ G Sbjct: 190 LTQLIRNVDKVLSRADLLRQVWGMEFDSDTSLVETYISYLRRKL--DNREPRLIRTVRGV 247 Query: 62 GYRFCGDLE 70 GY E Sbjct: 248 GYVLRRPRE 256 >UniRef50_B5HID4 Two-component system response regulator n=3 Tax=Streptomyces RepID=B5HID4_STRPR Length = 285 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+PG + +R +++ ++ RT+DV + +R+ I T+ G Sbjct: 194 LALLAEDPGAVYTRRQIIDQVWDPHFHGPTRTLDVHVATLRRKLGDA----RWIETVRGV 249 Query: 62 GYRFCGDL 69 G+R + Sbjct: 250 GFRLADHV 257 >UniRef50_C9XSJ2 Two-component response regulator n=15 Tax=Clostridiales RepID=C9XSJ2_CLODC Length = 228 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L F NP I +R LL ++ +D T+ V I+R+R+ E P +P+II T+ G Sbjct: 157 LLVFISNPKSIITRVRLLDELWDAAGEFVNDNTLTVYIKRLREKIEDDPSSPQIILTVRG 216 Query: 61 EGYRF 65 GYR Sbjct: 217 TGYRL 221 >UniRef50_C6X1B3 Phosphate regulon transcriptional regulatory protein phoB n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X1B3_FLAB3 Length = 227 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K+ R E+L+K+ G ++ +RT+DV IRR+R+ I T+ G Sbjct: 167 LYLLASNTNKVFKREEILEKVWGNDVIVGERTIDVHIRRLREKLGIGT-----IQTLKGI 221 Query: 62 GYRFC 66 GY+ Sbjct: 222 GYKLV 226 >UniRef50_A9KJT6 Two component transcriptional regulator, winged helix family n=17 Tax=Firmicutes RepID=A9KJT6_CLOPH Length = 228 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K R +L ++ G + DRT+D ++ +R+ I T+ G Sbjct: 166 LFFLIRNKNKAVPRENILTEVWGFDYCGDDRTLDTHMKLLRRSLGPYA---NFITTLRGL 222 Query: 62 GYRFCG 67 GYRF G Sbjct: 223 GYRFEG 228 >UniRef50_Q2IUG0 Two component transcriptional regulator, winged helix family n=207 Tax=Bacteria RepID=Q2IUG0_RHOP2 Length = 257 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G++ SR EL++ + ++ T++V + RIRK + II T+ G Sbjct: 186 LAYLMHHSGRVVSRTELVEHLYDQDFDRDSNTIEVFVGRIRKKLDVD-----IIQTVRGL 240 Query: 62 GYRFCGDLED 71 GY D Sbjct: 241 GYLLTPPPAD 250 >UniRef50_C1I9Y7 Two component transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Y7_9CLOT Length = 241 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +N ++ +R +L+ + G + RTVD ++++R+ E + + T+ Sbjct: 178 LMFLIKNKNRVFTREDLITSVWGYDFYGDTRTVDTHVKKLREKLEFFREN---LKTVWRV 234 Query: 62 GYRFCGD 68 GY + Sbjct: 235 GYSLTIE 241 >UniRef50_B0ACA3 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACA3_9CLOT Length = 222 Score = 82.9 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN ++ +R +LL + G + R VD I+ IRK I T+ G Sbjct: 159 ILKSLIENYPQVVTREKLLDSIWGYDYFGDTRIVDAHIKNIRKKIIL-----PYIKTVKG 213 Query: 61 EGYRFCGDL 69 GY D+ Sbjct: 214 IGYTLQKDI 222 >UniRef50_Q47IJ9 Two component transcriptional regulator, winged helix family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IJ9_DECAR Length = 227 Score = 82.5 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 N G++ SR ELL + +E RTVD R+RK ++ ++++++G+GYR Sbjct: 161 LLRNVGRVLSREELLTSVWSKEAGVDTRTVDTHASRLRKKLGLAGESGLMLSSVYGQGYR 220 Query: 65 FCG 67 Sbjct: 221 LDT 223 >UniRef50_C6B8S5 Two component transcriptional regulator, winged helix family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B8S5_RHILS Length = 219 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ FC+NPG+I SR ELL P +R++DV I R+R E P P +I T+ Sbjct: 148 LVVFCQNPGRILSREELLASTHAGLAGPIERSIDVHISRLRHKIEDNPHNPILIKTVRMG 207 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 208 GYFFAAVVE 216 >UniRef50_C0ZDJ8 Two-component response regulator n=5 Tax=Firmicutes RepID=C0ZDJ8_BREBN Length = 235 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L F N K R +LL K++ G + + T+ V I+R+R E P PE I T G Sbjct: 164 LLTFMMNAHKALKRDDLLMKVSEGEDAFFDENTLSVYIKRLRAKVEDDPKNPEFIVTQRG 223 Query: 61 EGYRFCGDL 69 GYR+ D+ Sbjct: 224 LGYRWNKDV 232 >UniRef50_Q5WC24 Two-component response regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WC24_BACSK Length = 224 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M NP +I S+ L + + G E TV IR IR +I T+ G Sbjct: 159 IMEMLMSNPRQIFSKDHLYETIWGVEATGQSHTVTEHIRNIRIRIHKIDPMANLIHTVWG 218 Query: 61 EGYRFC 66 GY+ Sbjct: 219 VGYKLE 224 >UniRef50_A0YRX3 Two-component response regulator n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YRX3_9CYAN Length = 624 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 33/64 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P +I S++ LL + + P + V I+ +R+ + + ++I T++G Sbjct: 158 LELFLRHPHRIFSQSALLDHLWSFDDPPSESAVRTQIKGLRQKLKQSGAVRDLIETVYGL 217 Query: 62 GYRF 65 GYR Sbjct: 218 GYRL 221 >UniRef50_C6HXQ3 Two component transcriptional regulator, winged helix family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXQ3_9BACT Length = 269 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++H +PGK+ R EL+ + G + D + V I +RK D I T+ G Sbjct: 200 ILVHLVRDPGKVYPREELMSLLWGEHWEVEDHNLSVHIHGLRKKLARPEDDRTPIETVRG 259 Query: 61 EGYR 64 GYR Sbjct: 260 VGYR 263 >UniRef50_Q2J7U7 Two component transcriptional regulator, winged helix family n=5 Tax=Actinomycetales RepID=Q2J7U7_FRASC Length = 272 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ S +L+ ++ G + ++ + I ++R+ E P P + T G Sbjct: 207 LEALVRHPGKLVSHQQLISQVWGPGVADDSSSLRLYINKLRRKLEPDPTRPRYLTTEPGL 266 Query: 62 GYRFCG 67 GYR+ Sbjct: 267 GYRYQP 272 >UniRef50_B5VW75 Multi-component transcriptional regulator, winged helix family n=3 Tax=Arthrospira RepID=B5VW75_SPIMA Length = 621 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +NP +I SR +++ ++ + +P + V I+ +R+ + +IIAT++G Sbjct: 159 LLLFLKNPQRIFSRQDIIDQLWSFDNEPSEYAVTNLIKDLRRTLKDAGMMGDIIATVYGL 218 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 219 GYRLNPPPE 227 >UniRef50_A6DFF3 DNA-binding response regulator n=2 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DFF3_9BACT Length = 230 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C++PG++ SR +L+K+ G ++ +RTVDV I IR+ I T+ G Sbjct: 167 LFFLCKHPGRVYSREAILEKIRGEDVIITERTVDVHILSIRRKVGDFAPN---IITVRGI 223 Query: 62 GYRFCGD 68 GY+ + Sbjct: 224 GYKVAEE 230 >UniRef50_C4RMB5 Two-component system response regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RMB5_9ACTO Length = 169 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ +R +LL + G E RTVDV +RR+R +T ++ T++G Sbjct: 98 LHFLAANPRRVFTRPQLLSNVWGYEHAVA-RTVDVHVRRLRAKL---GNTIPMVTTVYGV 153 Query: 62 GYRFCGDLE 70 GYR + Sbjct: 154 GYRLADEAR 162 >UniRef50_A9KSV1 Two component transcriptional regulator, winged helix family n=9 Tax=Firmicutes RepID=A9KSV1_CLOPH Length = 229 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ S+ E+ D+T++V I IR + + + I T+ G Sbjct: 164 ILELLLLHPNKVFSKQEIYNYAWEEYFIGEDKTINVHISNIRMKLKKVTED-DYIDTVWG 222 Query: 61 EGYRFCG 67 G++ Sbjct: 223 IGFKLSK 229 >UniRef50_B1HZW1 Transcriptional regulatory protein cutR (Defective melC1 suppressor protein) n=6 Tax=Firmicutes RepID=B1HZW1_LYSSC Length = 230 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + K+ S EL++ + E ++ I +RK E+I TI G Sbjct: 157 ILEYLMLHQNKVISSEELIEHVWDSETDLFSNSLKFHIHSLRKKIADVLGEIEVIQTIRG 216 Query: 61 EGYRFCGDLE 70 +GY + Sbjct: 217 QGYIITENDR 226 >UniRef50_Q49XM7 Response regulator arlR n=145 Tax=Bacteria RepID=ARLR_STAS1 Length = 220 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN + R +++ + G + + VDV IR +R + + I T+ G Sbjct: 156 LFLLVENRNHVLQREQIITDVWGYDTEVETNVVDVYIRYLRNKLKPFGKD-KCIETVRGV 214 Query: 62 GY 63 GY Sbjct: 215 GY 216 >UniRef50_Q1NLC6 Response regulator receiver n=3 Tax=Deltaproteobacteria RepID=Q1NLC6_9DELT Length = 298 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN + +R E+ K++ + R +DV I+ +R+ E TP P I T+ G Sbjct: 232 LACLMENRNHLVTREEIRKRLWRDSKIYSWSRVIDVHIQHLRQKVEETPSQPHHIVTVPG 291 Query: 61 EGYRF 65 GYRF Sbjct: 292 RGYRF 296 >UniRef50_C0CLW6 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CLW6_9FIRM Length = 228 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 28/64 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E P KI S+A L + + E D T++V I +R E I T+ G Sbjct: 160 LRLLMEFPDKIFSKANLFQSVWNMEYISEDNTLNVHISNLRSKLRKICPDREFIDTVWGI 219 Query: 62 GYRF 65 GYR Sbjct: 220 GYRM 223 >UniRef50_Q9F5J0 Sim1 n=2 Tax=Streptomyces antibioticus RepID=Q9F5J0_STRAT Length = 251 Score = 82.5 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ +R +++ ++ G + RT+ V + IRK PE++ T+ G Sbjct: 180 LALLATDPGRVFTREQIMFEVWGHDGAGDTRTLGVHVTGIRKKL----RMPELVETVRGV 235 Query: 62 GYRFC 66 G+R Sbjct: 236 GFRLA 240 >UniRef50_Q7ULL1 Two-component system response regulator n=1 Tax=Rhodopirellula baltica RepID=Q7ULL1_RHOBA Length = 239 Score = 82.1 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + G + R L ++ G P+ RTVD T+ ++RK E P P II T++G Sbjct: 169 ILILLHDADGDVVHRQTLFQECWGHNRVPNSRTVDQTVSQLRKRIERDPKHPRIIQTVYG 228 Query: 61 EGYRFC 66 GYR+ Sbjct: 229 LGYRYE 234 >UniRef50_B6GBG2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBG2_9ACTN Length = 278 Score = 82.1 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P + ++ +L + G D TV V + IR + T I T+ G Sbjct: 213 LEALMRQPKRAWAKQDLFEAAWGEPYAGDDSTVTVHMSNIRTKLKPTGTDA-YIKTVWGI 271 Query: 62 GYRFCGD 68 G++ + Sbjct: 272 GFKLVEE 278 >UniRef50_C5NUZ8 Response regulator ArlR n=4 Tax=Bacteria RepID=C5NUZ8_9BACL Length = 223 Score = 82.1 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +N I SR ++L + + VDV I+ IRK II T G Sbjct: 157 VLEYLMKNKESILSRDQILNHVWDYDYDGASNIVDVIIKNIRKKL-DNGTDKTIIYTKRG 215 Query: 61 EGYRFCGD 68 GY F + Sbjct: 216 LGY-FVKE 222 >UniRef50_B5W2T9 Multi-component transcriptional regulator, winged helix family n=2 Tax=Arthrospira RepID=B5W2T9_SPIMA Length = 774 Score = 82.1 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F +P ++ S +++ + E D TV I+ +R + P++I ++G G Sbjct: 159 ELFIRSPYRVFSYDSIIEHLWSIEEPAADNTVRAHIKSLRNKLKDAGGDPKLIENVYGIG 218 Query: 63 YR 64 YR Sbjct: 219 YR 220 >UniRef50_C4Z9T4 Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T4_EUBR3 Length = 145 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +N GKI ++ +L+++ + V V I R+RK E+ P I + Sbjct: 78 ILELLAKNQGKIVTKEVILEQVWDIDENFVDTHAVTVVINRLRKKIENNMTEPVYIRNVF 137 Query: 60 GEGYRF 65 G GY F Sbjct: 138 GVGYTF 143 >UniRef50_A5EYW4 Transcriptional regulator n=31 Tax=Bacteria RepID=A5EYW4_VIBC3 Length = 224 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F PG I SR +L + G P VDV +RR+RK P +I T G Sbjct: 158 ILELFLRKPGHIFSRERILANVWGIHQDPLTNVVDVYMRRLRKKI-DMPFAQPLIQTKRG 216 Query: 61 EGYRF 65 GY Sbjct: 217 MGYYL 221 >UniRef50_B6BUZ2 Two component transcriptional regulator, winged helix family n=1 Tax=beta proteobacterium KB13 RepID=B6BUZ2_9PROT Length = 233 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C N ++ SR ++ K+ E + RT+DV ++R+R +S I TI G Sbjct: 164 LYLLCMNKNRVLSREIIVDKIWNNESEIDARTIDVHVKRLRSTLKSHGIENS-IETIRGA 222 Query: 62 GYRFCGDLE 70 GY+ ++ Sbjct: 223 GYKLSDEIN 231 >UniRef50_A4SHT1 Two-component system response regulator n=10 Tax=Proteobacteria RepID=A4SHT1_AERS4 Length = 218 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + ++ GK+ SR+EL+ + ++ TV+V I RIRK ++I T+ G Sbjct: 157 VLGYLMQHRGKVVSRSELIDHIYAQDFDRDSNTVEVFIGRIRKK-----THADLIETVRG 211 Query: 61 EGYR 64 GYR Sbjct: 212 LGYR 215 >UniRef50_B8FQS3 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridiales RepID=B8FQS3_DESHD Length = 226 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN GKI +R LL ++ G + +DR VD I+++R+ + I T+ Sbjct: 162 LKLLMENAGKIVTRETLLARIWGYDFSGNDRVVDNHIKKLRQTLGKGAEQ---IKTVVKS 218 Query: 62 GYRFC 66 GYR Sbjct: 219 GYRLE 223 >UniRef50_A0RG02 Two-component response regulator n=92 Tax=Bacteria RepID=A0RG02_BACAH Length = 236 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N + +R ++ + + + + +DV +R +RK + ++I T+ G Sbjct: 169 ILEYMIRNKEVVLTRDKIEQHVWNYDYEGGSNIIDVYVRYLRKKV-DSQFETKLIHTVRG 227 Query: 61 EGYRFCGD 68 GY + Sbjct: 228 TGYVLRVE 235 >UniRef50_C8WMT6 Two component transcriptional regulator, winged helix family n=2 Tax=Coriobacteriaceae RepID=C8WMT6_EGGLE Length = 226 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G + S+ L K+ G V+V + +RK T I TI G Sbjct: 157 ILEYLVSHQGSLISKERLFDKIWGFMSDTSSNVVEVYVSALRKALAPTGYD-RYIKTIRG 215 Query: 61 EGYRFCGDLED 71 GY F D D Sbjct: 216 AGYLFTEDDHD 226 >UniRef50_Q1YN14 Putative transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YN14_MOBAS Length = 251 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E G++ SR LL+ + + DR+VDV + R+RK + P P + T++G Sbjct: 180 LRAFLEAQGRVLSRDFLLELFSASGEEAFDRSVDVRVSRLRKKLDEDPKKPVHVRTVYGA 239 Query: 62 GYRFCGDLE 70 GY F ++ Sbjct: 240 GYVFATRVD 248 >UniRef50_Q82EB1 Transcriptional regulatory protein cseB n=29 Tax=Actinobacteria (class) RepID=CSEB_STRAW Length = 235 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F PG + SR +LL+++ R VDV ++R+R I T+ G Sbjct: 175 LLEFSSAPGTVLSRDKLLERVWDYGWGGDTRVVDVHVQRLRTKIGQD-----RIDTVRGF 229 Query: 62 GYRFCG 67 GY+ Sbjct: 230 GYKLKA 235 >UniRef50_C7N0P4 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0P4_SLAHD Length = 422 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + G++ ++ EL++ G + + V +RRIRK E P P+ + T+ G Sbjct: 354 ILYTLACRAGEVVTQRELVEAAWGEDYTEQMAGLAVYVRRIRKKIEDNPAEPQFLLTVWG 413 Query: 61 EGYRF 65 EGY F Sbjct: 414 EGYTF 418 >UniRef50_C9B9W7 Transcriptional regulator n=12 Tax=cellular organisms RepID=C9B9W7_ENTFC Length = 226 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P K+ SRA L + + ++TV++ I +R I T+ G Sbjct: 164 LKLFLEHPKKVFSRANLYETVWQEPYFDSEKTVNMHISNLRGKLAKA--HAVYIHTVWGV 221 Query: 62 GYRFC 66 G+RF Sbjct: 222 GFRFD 226 >UniRef50_C2BEN4 Possible response regulator n=3 Tax=Anaerococcus RepID=C2BEN4_9FIRM Length = 215 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + EN R +L + G + + +D T+ VTI+R+R I T+ Sbjct: 150 ILEMLLENQNINLLRDRILDYVWGYDFYEVNDNTLTVTIKRLRSKLGDYGSH---IKTLR 206 Query: 60 GEGYRFCGD 68 G GYR+ + Sbjct: 207 GIGYRWDNE 215 >UniRef50_A1S359 Putative transcriptional regulator, CadC n=1 Tax=Shewanella amazonensis SB2B RepID=A1S359_SHEAM Length = 729 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ E G+ SR EL++++ R + D ++ I ++R + ++I T+ Sbjct: 37 VLVCLLERAGRPVSRDELIREVW-RGGQVSDNAINRIIAQLRSALGDDARSQQVIQTVPK 95 Query: 61 EGYRFCGDLE 70 GY ++E Sbjct: 96 VGYLLIAEVE 105 >UniRef50_B2IXN9 Multi-component transcriptional regulator, winged helix family n=4 Tax=Nostocaceae RepID=B2IXN9_NOSP7 Length = 624 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N +I SRA ++ ++ E P + T+ I+ +R+ ++ + I T++G Sbjct: 158 LDLFLRNNQRIFSRATIVDQLWSAEKDPPEENTIKSHIKSLRQKLKTAGANYDFIETVYG 217 Query: 61 EGYRFCG 67 GYR Sbjct: 218 MGYRLKA 224 >UniRef50_UPI0001787D57 two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787D57 Length = 228 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P + + +LL K + T+ V + R+R+ E+ P+ P+ + + G Sbjct: 164 LRVFAEHPRHVFTYDQLLAKFW--DGVGDRHTIRVHLSRLREKIEADPNQPQFLVNVWGV 221 Query: 62 GYRFCG 67 GYRF G Sbjct: 222 GYRFEG 227 >UniRef50_P15795 Cholera toxin transcriptional activator n=121 Tax=Gammaproteobacteria RepID=TOXR_VIBCH Length = 294 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + P ++ SR +L + + + D ++ I +RK + + +P+ + T+ Sbjct: 54 ILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSSLTQAISTLRKMLKDSTKSPQYVKTVP 113 Query: 60 GEGYRFCGDLE 70 GY+ +E Sbjct: 114 KRGYQLIARVE 124 >UniRef50_D1VJ14 Two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VJ14_9ACTO Length = 284 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++++R E+ +++ G + +DV I +R+ PE+I T++G Sbjct: 218 LAYLAADPGRVRTRREIFQEIWGP-WFGSTKVLDVHIGSLRRKLGR----PELIETVYGV 272 Query: 62 GYRFCGDLE 70 G+R E Sbjct: 273 GFRLADPAE 281 >UniRef50_A6W7C9 Two component transcriptional regulator, winged helix family n=37 Tax=Actinobacteridae RepID=A6W7C9_KINRD Length = 254 Score = 82.1 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E+P + +R +LL+++ RTVD ++ +R+ + ++ T+HG Sbjct: 187 LVCLAESPRTVLTREKLLEEVWDWADASGTRTVDSHVKALRRKLGAD-----LVRTVHGV 241 Query: 62 GYRFCG 67 GY F Sbjct: 242 GYAFEP 247 >UniRef50_A8W7F8 Putative regulator n=1 Tax=Streptomyces refuineus subsp. thermotolerans RepID=A8W7F8_9ACTO Length = 273 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 10/73 (13%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHD------RTVDVTIRRIRKHFESTPDTPEII 55 + P K+ SRAELL+++ + + RT+D + +RK +P+ I Sbjct: 165 LHLLAAEPDKLFSRAELLRRVWDYDDVSAEVTSLASRTIDTHVSSLRKKLG----SPDWI 220 Query: 56 ATIHGEGYRFCGD 68 T+ G G+RF G+ Sbjct: 221 ITVRGVGFRFNGE 233 >UniRef50_C7QZL8 Putative two component transcriptional regulator, winged helix family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QZL8_JONDD Length = 316 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H G + SR EL + ++ RT+DV +RR+R + I T+ G Sbjct: 241 LAHLVTRAGSVISRQELFASVWRTDVPSDSRTIDVHVRRLRDKLGLE----DHIITVRGA 296 Query: 62 GYRFC 66 GY+F Sbjct: 297 GYKFE 301 >UniRef50_C4ZEN6 Two component transcriptional regulator, winged helix family n=11 Tax=Clostridiales RepID=C4ZEN6_EUBR3 Length = 232 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N ++ +R +L ++ D T+ V +RR+R+ E+ P PE + TI G Sbjct: 163 LCLLVRNANRVVTRDIILNELWDDTGNFVDDNTLSVYVRRLREKVETNPSHPEHLITIRG 222 Query: 61 EGYRF 65 GY++ Sbjct: 223 FGYQW 227 >UniRef50_A3ER20 Putative two component transcriptional regulator, winged helix family n=2 Tax=Leptospirillum sp. Group II RepID=A3ER20_9BACT Length = 259 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++ + + R EL+K + G + + ++V I +R+ D+P I T+ G Sbjct: 176 ILVYLVSHEDVVIRREELMKVLWGESWEVDEHNLNVHIWALRRKLGEKSDSPRFIETLRG 235 Query: 61 EGYRFCG 67 GYRF Sbjct: 236 TGYRFRS 242 >UniRef50_B0S387 Two-component response regulator n=6 Tax=Clostridiales Family XI. Incertae Sedis RepID=B0S387_FINM2 Length = 231 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +N I S +L+ + + ++ T+ I RIR+ E P P+I+ TI G Sbjct: 164 ILSYLADNMNMIVSIDRILENIW-EDSYGYENTLITHIYRIREKLEDNPRDPKILITIKG 222 Query: 61 EGYRFCGDL 69 GY+ + Sbjct: 223 LGYKLVKED 231 >UniRef50_C7QI13 Two component transcriptional regulator, winged helix family n=13 Tax=Actinomycetales RepID=C7QI13_CATAD Length = 241 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 35/59 (59%) Query: 9 PGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 PG++ +RA+LL+ G + +R VDV + +RK E+ P P + T++G GY+ G Sbjct: 181 PGRVFTRAQLLRHTRGFDRASTERAVDVHVLNLRKKIEANPARPTRLLTVYGVGYKLVG 239 >UniRef50_O66657 Transcriptional regulator (PhoB-like) n=2 Tax=Aquificaceae RepID=O66657_AQUAE Length = 228 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G+ SR+ L++K+ E + +R +DV ++ IR +I T+ G Sbjct: 165 ILKTLMENFGRPVSRSSLVEKLWDYERETTERAIDVHVKHIRDKLGKYKG---LIKTVRG 221 Query: 61 EGYRFC 66 GY+F Sbjct: 222 VGYKFE 227 >UniRef50_A3Q549 Two component transcriptional regulator, winged helix family n=1 Tax=Mycobacterium sp. JLS RepID=A3Q549_MYCSJ Length = 246 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG + + ++L + G + V I +R+ P P ++ + G Sbjct: 180 ILATLAQRPGAVTTLQQMLDAVWGPRWAGSTAKLHVHIGNLRRKLGDNPARPLLVLNVRG 239 Query: 61 EGYRFC 66 GYR Sbjct: 240 IGYRLA 245 >UniRef50_B9JNY4 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNY4_AGRRK Length = 226 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG + +R ++L + G R VDV I R+RK + +II TI G Sbjct: 162 ILEFLMRNPGTVHTRTDVLTNVWGPHATVDPRVVDVHIGRLRKCIS-NSENDDIIRTIRG 220 Query: 61 EGYRF 65 GY Sbjct: 221 AGYAL 225 >UniRef50_UPI0001AF1AC1 two-component system response regulator n=3 Tax=Streptomyces RepID=UPI0001AF1AC1 Length = 290 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + CE+PG + SR +L+ + + +T+DV + +R+ P I T+ G Sbjct: 206 LALLCEDPGAVCSRRRILEHVWDPYYEGATKTLDVHVASLRRKLGR----PGWIQTLRGV 261 Query: 62 GYRFC 66 G+R Sbjct: 262 GFRLA 266 >UniRef50_A9KX94 Two component transcriptional regulator, winged helix family n=7 Tax=Gammaproteobacteria RepID=A9KX94_SHEB9 Length = 235 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +N G I SR ++++++ G +R VD I ++RK P I TI + Sbjct: 167 LITLAKNAGNILSRNDIVEQVKGYYYDGIERGVDNHICQLRKKLGDDARNPFKIKTIRSK 226 Query: 62 GYRFCG 67 GY F Sbjct: 227 GYLFVS 232 >UniRef50_C6LCG6 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LCG6_9FIRM Length = 224 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F ENP +I SR +LL + G + ++R VD I+++RK + +I TI Sbjct: 160 LLFFLENPKRIFSREQLLIRFWGYDFDGNERVVDNHIKKLRKLLGKSGS---MIRTIRKS 216 Query: 62 GYRFC 66 GYR Sbjct: 217 GYRME 221 >UniRef50_A5VAJ0 Two component transcriptional regulator, winged helix family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VAJ0_SPHWW Length = 226 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L N I +RA LL+K+ G + +P VDV IRR+R + + I+T+ G Sbjct: 162 LLELVRNVDSIVTRAMLLEKVWGYDFEPATNLVDVHIRRLRAKLTANGG-GDPISTVRGV 220 Query: 62 GYRF 65 GY Sbjct: 221 GYLL 224 >UniRef50_UPI0001AEBEBF two component transcriptional regulator, winged helix family protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBEBF Length = 225 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F EN K+ SR +L ++ P VDV I R+R+ I T+ G Sbjct: 160 LYYFAENAEKVLSRERILSRVWRSHSDPLTNVVDVYISRLRQKL--HSSDAIFIETLRGN 217 Query: 62 GYRFCG 67 GYR Sbjct: 218 GYRLTT 223 >UniRef50_C9ZAU5 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZAU5_STRSW Length = 464 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+PG + SR ++L ++ + +T+DV + +R+ P I T+ G Sbjct: 363 LALLTEDPGAVYSRQQILNRVWDDHYQGPTKTLDVHVATLRRKLGD----PAWIQTLRGV 418 Query: 62 GYRFC 66 G+R Sbjct: 419 GFRLA 423 >UniRef50_A7BNW6 Two component response regulator n=1 Tax=Beggiatoa sp. SS RepID=A7BNW6_9GAMM Length = 151 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +R +LL+ GRE P DR++DV + R+R+H P II T Sbjct: 80 LRVFLAHPKRVLTRDQLLELSQGREALPFDRSIDVLVGRLRRHLGENAKNPNIIKTERSA 139 Query: 62 GYRFCGDLE 70 GY D++ Sbjct: 140 GYILATDVQ 148 >UniRef50_A5Z504 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5Z504_9FIRM Length = 221 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P KI S+ L + + D T++ I IRK ++ + I TI G Sbjct: 157 ILRLLLQYPQKIFSKQNLYESIWNETYAYDDDTINTHISHIRKKIKAI-TNEDYIQTIWG 215 Query: 61 EGYR 64 GY+ Sbjct: 216 IGYK 219 >UniRef50_B7GFY6 DNA-binding response regulator, OmpR family (REC-wHTH domains) n=16 Tax=Firmicutes RepID=B7GFY6_ANOFW Length = 226 Score = 81.3 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ +R +L ++ G + +T+D T++ +RK + ++I T+ G Sbjct: 163 LDLLLQNRGRVLTRDIILDRIWGYDADVSMKTIDATVKLLRKKIGD--EQQQLIKTVRGV 220 Query: 62 GY 63 GY Sbjct: 221 GY 222 >UniRef50_C7S7A3 LRA-16 n=2 Tax=Bacteria RepID=C7S7A3_9BACT Length = 231 Score = 81.3 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFE-STPDTPEIIATIHG 60 + NPG++ SR++LL +E DR +D I+ +RK + P E+I ++G Sbjct: 162 LKLLVSNPGRVYSRSQLLDLCYQQEQLIIDRVIDSHIKNLRKKISTALPPGQEVIHAVYG 221 Query: 61 EGYRFC 66 GYRF Sbjct: 222 IGYRFE 227 >UniRef50_D1BJH9 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Actinomycetales RepID=D1BJH9_SANKS Length = 253 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ +R LL+ + G +L P R VD + IR+ P + T+ Sbjct: 183 LDYLMTHPRELHTRERLLQALWGFDLVPSTRAVDHRVAEIRRVLHDDAGAPRYVETVPNL 242 Query: 62 GYRFCGDLE 70 GYRFCG + Sbjct: 243 GYRFCGQVR 251 >UniRef50_C0QFG8 Two-component DNA-binding response regulator n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFG8_DESAH Length = 233 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + G + +R +++ + G +R+VDVTI +RK + I T+ G Sbjct: 166 VLWFLVTKKGWVFTRGQIVDAVHGENYAVTERSVDVTIAGLRKKLGPCA---DFIETVRG 222 Query: 61 EGYRFCGDLE 70 GYRF + + Sbjct: 223 VGYRFREEAD 232 >UniRef50_C7MMC5 Response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein n=2 Tax=Bacteria RepID=C7MMC5_CRYCD Length = 271 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GKI R + +++ + D T+ V + +R + + I T G Sbjct: 163 ILSLLMRNAGKIVPRERIQEELWNSDEFIDDNTLTVNVSHLRHTLSTIGAD-DFIRTKRG 221 Query: 61 EGYRFC 66 GY F Sbjct: 222 IGYSFE 227 >UniRef50_B2D6Y9 ToxR n=2 Tax=Vibrio cholerae RepID=B2D6Y9_VIBCH Length = 186 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + P ++ SR +L + + + D ++ I +RK + + +P+ + T+ Sbjct: 42 ILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSSLTQAISTLRKMLKDSTKSPQYVKTVP 101 Query: 60 GEGYRFCGDLE 70 GY+ +E Sbjct: 102 KRGYQLIARVE 112 >UniRef50_Q2NZ71 Two-component system regulatory protein n=18 Tax=Proteobacteria RepID=Q2NZ71_XANOM Length = 242 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P ++ SR +LL+ GR+ +DR +D I R+R+ E+I T+ E Sbjct: 173 LRTFVEHPQRVLSRDQLLECARGRDTDVYDRAIDSQISRLRRKINER-VHTELIRTVRNE 231 Query: 62 GYRFCGDL 69 GY + Sbjct: 232 GYMLLPSV 239 >UniRef50_A2CD17 Two-component response regulator n=58 Tax=Cyanobacteria RepID=A2CD17_PROM3 Length = 268 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ + + +LK++ G E T+ V +R +R E P P I T++G Sbjct: 168 LHCLLQRHGQTVAPSLILKEVWGYEPDDDIETIRVHVRHLRTKLEPDPRKPRFIKTVYGA 227 Query: 62 GYRFC 66 GY Sbjct: 228 GYCLE 232 >UniRef50_A4FGQ8 Putative uncharacterized protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FGQ8_SACEN Length = 208 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ENPG++ R LL+ + G E RTVDV +RR+R + I TI G Sbjct: 114 LLFLAENPGRVHRRGSLLRLVWGIESALSTRTVDVHVRRLRGKCGP---ELDFITTIRGV 170 Query: 62 GYRFCG 67 GYRF G Sbjct: 171 GYRFDG 176 >UniRef50_D2R142 Two component transcriptional regulator, winged helix family n=2 Tax=Planctomycetaceae RepID=D2R142_9PLAN Length = 237 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SR ELL + RT+D+ I R+R+ P P ++ T+ G+ Sbjct: 165 RYLASHAGRAISRDELLVNVWRISPDGLPTRTIDMQIARLREKLRDDPTQPRVLLTVRGK 224 Query: 62 GYRFC 66 GY F Sbjct: 225 GYMFA 229 >UniRef50_C6LFN3 DNA-binding response regulator ResD n=21 Tax=Bacteria RepID=C6LFN3_9FIRM Length = 251 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P KI +R +L+ ++ G + +RTV+ I R+R F D I T+ G Sbjct: 185 LYKLLSYPNKIFTRQQLMDEIWGMFSETDERTVNTHINRLRDKFSDCSDFE--IVTVRGL 242 Query: 62 GYRFCGDLE 70 GY+ ++E Sbjct: 243 GYKAVKNVE 251 >UniRef50_Q1D8M8 DNA-binding response regulator PhoP2 n=4 Tax=Myxococcus xanthus RepID=Q1D8M8_MYXXD Length = 238 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 29/65 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + R E+L + GR++ RTVD + ++K T + I TI G Sbjct: 170 LAFLLRHQDRALPRGEILDAVWGRDVVVDPRTVDNFVSSLKKKLGWTSTSGFSIHTIRGV 229 Query: 62 GYRFC 66 GYR Sbjct: 230 GYRME 234 >UniRef50_A5N5X6 Transcriptional regulator n=5 Tax=Clostridium RepID=A5N5X6_CLOK5 Length = 225 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N ++ ++ ++L ++ G + + ++V +RK II TI G Sbjct: 159 LELLARNKNQVLTKDQILDRVWGPDSDVEMNNNIEVYFSYLRKKLRRLNCN-VIIETIRG 217 Query: 61 EGYRF 65 GY Sbjct: 218 IGYCL 222 >UniRef50_C1A1E5 Turgor pressure transcriptional regulator n=5 Tax=Actinomycetales RepID=C1A1E5_RHOE4 Length = 226 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N GK+ + ELL+++ G + V + ++R+ E P P+ + T G Sbjct: 161 LEMLVRNRGKLVGQKELLREVWGPAYDTETHYLRVYLAQLRRKLEDDPANPKHLITEAGM 220 Query: 62 GYRFC 66 GYRF Sbjct: 221 GYRFV 225 >UniRef50_A4X6U8 Transcriptional regulator domain protein n=4 Tax=Micromonosporaceae RepID=A4X6U8_SALTO Length = 203 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LH +P ++ +R +LL + G E RTVDV +RR+R ++ T++G Sbjct: 132 LLHLVAHPRRVFTRLQLLNAVWGYEHAGV-RTVDVHVRRLRGKVGVDVP---LVTTVYGV 187 Query: 62 GYRFCGDLE 70 GYR D Sbjct: 188 GYRLADDAR 196 >UniRef50_Q1LCD6 Two component transcriptional regulator, winged helix family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LCD6_RALME Length = 225 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + G+I SRA+L + + +L D +DV ++ +R+ P +I T+ G Sbjct: 156 ILILLVTHAGEIVSRAQLAEHIWHADLIAIDNLIDVHMKNLRRKL-DPPGMAALIQTVRG 214 Query: 61 EGYRFCG 67 +G+R Sbjct: 215 QGFRISP 221 >UniRef50_A8L9L0 Two component transcriptional regulator, winged helix family n=11 Tax=Actinomycetales RepID=A8L9L0_FRASN Length = 236 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGK+ S L+ ++ G ++ + I R+R+ E P P + T G Sbjct: 171 LEALVRNPGKLVSSRALVSQVWGPAYAADTSSLRLYINRLRRKLEPDPTRPRHLTTEPGM 230 Query: 62 GYRFCG 67 GYR+ Sbjct: 231 GYRYQP 236 >UniRef50_B9T9H2 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9T9H2_RICCO Length = 104 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG I + ++LL ++ G + + + I R+R E P P+I+ T G Sbjct: 40 LMLLASKPGTIFTHSQLLAQVWGPDYIDDTHYLRIHIGRLRAKLEDQPSAPQILLTELGI 99 Query: 62 GYRFC 66 GYR Sbjct: 100 GYRLA 104 >UniRef50_P0A9Q3 Aerobic respiration control protein arcA n=222 Tax=Gammaproteobacteria RepID=ARCA_ECO57 Length = 238 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG Sbjct: 170 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 229 Query: 63 YRFCGDLED 71 YRFCGDLED Sbjct: 230 YRFCGDLED 238 >UniRef50_B0RZK9 Two-component response regulator n=2 Tax=Finegoldia magna RepID=B0RZK9_FINM2 Length = 222 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M F NP K+ SR L+ + + RT+D I+ +RK I T+ G Sbjct: 159 IMSLFLNNPTKVFSRENLINSLYNTDFYGSSRTIDSHIKNLRKKLPKD-----FIKTVIG 213 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 214 AGYKLNEE 221 >UniRef50_C3WA46 Two-component response regulator n=6 Tax=Fusobacterium RepID=C3WA46_FUSMR Length = 234 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M F N + SR ++++++ G + + D+ VDV I +RK E + I T+ G Sbjct: 161 IMYLFLLNKEIVISREKIIEEIWGYDFEGKDKIVDVYINLLRKKIE--NKNEKYIHTVRG 218 Query: 61 EGYRFCGDLED 71 GY +++ Sbjct: 219 FGYILKKIIKN 229 >UniRef50_A3Z9V3 Two-component response regulator n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z9V3_9SYNE Length = 120 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ + + +LK++ G E T+ V +R +R E P P I T++G Sbjct: 24 LHCLLQRHGQTVAPSLILKEVWGYEPDDDIETIRVHVRHLRTKLEPDPRKPRFIKTVYGA 83 Query: 62 GYRFC 66 GY Sbjct: 84 GYCLE 88 >UniRef50_B4WPA6 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WPA6_9SYNE Length = 685 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SR+ +++ + + P + +V ++ +R+ + I ++G Sbjct: 158 LELFLRNPSRVFSRSHIIEHLWTFDDPPLEDSVKAHVKGLRRRLKQAGADG-WIENVYGM 216 Query: 62 GYRFCGDLE 70 GY+ ++ Sbjct: 217 GYKLSPKID 225 >UniRef50_Q1QYP1 Two component transcriptional regulator, winged helix family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYP1_CHRSD Length = 230 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 35/66 (53%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F +NPG++ +R+ LL+++ G + RTVD I +R+ + + +++ +G Sbjct: 163 ALFLQNPGQLFTRSYLLERIWGVSGALNTRTVDTHISGLRRKLKLDGQHNYRLKSVYQQG 222 Query: 63 YRFCGD 68 YR + Sbjct: 223 YRLEAN 228 >UniRef50_C4L2J9 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L2J9_EXISA Length = 221 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHG 60 + PG++ R EL++ + G + + +RTVDV I+R+R F D P + I T+ G Sbjct: 157 LFQLASFPGRVYRREELIELVWGFDFEGDERTVDVHIKRLRNRF----DHPALTIRTVRG 212 Query: 61 EGYRFC 66 GY Sbjct: 213 VGYALE 218 >UniRef50_A4AIS8 Two-component system, regulatory protein n=2 Tax=Actinobacteria (class) RepID=A4AIS8_9ACTN Length = 242 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ +R+ +L ++ G VD + +R+ E T + I+T+ G Sbjct: 176 LWMLATHPGEALTRSTILSEVWGTTAHIDANVVDQYVSYLRRKLEPT-QSGVTISTVRGV 234 Query: 62 GYRFCG 67 GY Sbjct: 235 GYALSA 240 >UniRef50_A9AUH9 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AUH9_HERA2 Length = 229 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 28/69 (40%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P + R LL+ + G R VDV ++R+R + I T+ G Sbjct: 161 VLLQLMRQPSHVWGRLALLQTVWGTNFLGDSRIVDVCVQRLRAKINQLDANADPIQTVRG 220 Query: 61 EGYRFCGDL 69 GYR + Sbjct: 221 FGYRLKCEP 229 >UniRef50_UPI0001787E68 two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787E68 Length = 239 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L G++ +R ++LK++ + VDV I +R+ +++ TI G Sbjct: 162 LLFLARRQGQVCTREDILKQVWDYDFHTGTNVVDVYILHLREKI-DRGRKQKLLRTIRGA 220 Query: 62 GYRFCGDLE 70 GY+ E Sbjct: 221 GYKLLSQEE 229 >UniRef50_A4WZ32 Transposase and inactivated derivatives-like protein n=5 Tax=Alphaproteobacteria RepID=A4WZ32_RHOS5 Length = 229 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ + LL+++ G H + VT+R +RK E P P +I G Sbjct: 160 LAVLASHPGKVLTHTHLLREVWGPAHTDHVEYLRVTVRSLRKKLEEDPSAPRLIQNEPGV 219 Query: 62 GYRFCGD 68 GYR Sbjct: 220 GYRLRDP 226 >UniRef50_Q3KB13 Two component Transcriptional regulator, Winged helix family n=33 Tax=Proteobacteria RepID=Q3KB13_PSEPF Length = 245 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ SR +LL GR+ DR++D+ + R+R+ P I T+ E Sbjct: 172 LRVFLDHPQRVLSRDQLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDSREPTYIKTVRNE 231 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 232 GYVFSFAVE 240 >UniRef50_D1AJ61 Two component transcriptional regulator, winged helix family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AJ61_SEBTE Length = 219 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ EN G I+SR ++L + G + + DR VD I++IRK + + T+ Sbjct: 156 ILLYLIENKGVIKSRDDILIHIWGYDSEVFDRVVDNHIKKIRKKLGDYS---DYVKTVVS 212 Query: 61 EGYRFC 66 GY+F Sbjct: 213 IGYKFE 218 >UniRef50_A4W108 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=28 Tax=Streptococcaceae RepID=A4W108_STRS2 Length = 224 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E G+I S+ ELL+K+ E T++V + R+RK E I T+ G Sbjct: 161 ILSALLERQGQIVSKDELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGF--ERIHTVRG 218 Query: 61 EGY 63 GY Sbjct: 219 VGY 221 >UniRef50_Q6FEG0 Transcriptional regulator protein (OmpR family), response regulator in two-component regulatory system with BaeS, regulates RNA synthesis n=16 Tax=Acinetobacter RepID=Q6FEG0_ACIAD Length = 228 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF---ESTPDTPEIIATI 58 + F E+ G++ SRA+LL + DR +D I+ +R+ T + E + + Sbjct: 157 LELFLEHLGQVYSRAQLLDHINPDSFDVADRVIDSHIKNLRRKISEAADTGNRHEWVQAV 216 Query: 59 HGEGYRFCGDLE 70 +G GYRF + Sbjct: 217 YGVGYRFEYPED 228 >UniRef50_B7KB48 Multi-component transcriptional regulator, winged helix family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KB48_CYAP7 Length = 597 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +P +I SR++++ ++ + P + V I+ +R+ + E+I TI+ Sbjct: 158 ILELFLRHPQRIFSRSDIIDRLWMIDESPTEAAVTNLIKDLRRKLTAAGMKEELIETIYK 217 Query: 61 EGYRFCGDLE 70 GYR + Sbjct: 218 LGYRLKSAPD 227 >UniRef50_D1CB22 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=D1CB22_THET1 Length = 238 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + + G++ +L++ + G + D V I +R+ E P P+ I T+ G G Sbjct: 174 RYMVMHQGEVLPTEDLMRNVWGYSVAADDSLVKTHIYYLRQRIEEDPAHPKHILTVPGVG 233 Query: 63 YRFCG 67 Y F Sbjct: 234 YLFQP 238 >UniRef50_C8WHB5 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=C8WHB5_EGGLE Length = 223 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L F ++ GK+ +R + + D T+ V ++R+R E P P +I T+ G Sbjct: 157 LLLFAQSRGKLVTREHVRNAIWDSAGEYVSDNTLSVYVKRLRDKVEDDPAEPRLILTVRG 216 Query: 61 EGYR 64 GYR Sbjct: 217 LGYR 220 >UniRef50_C6LI81 DNA-binding response regulator DltR n=2 Tax=Clostridiales RepID=C6LI81_9FIRM Length = 248 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + NP ++ SR+ + +K+ G + + VDV I +RK + T E I + G G Sbjct: 180 EYLMRNPKQVISRSRITEKIWGYDSEVEYNNVDVYISFLRKKLKHTGAHVE-IRAVRGIG 238 Query: 63 YRF 65 Y Sbjct: 239 YTL 241 >UniRef50_C8W041 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W041_DESAS Length = 384 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +P ++ + +L+++ G V+V I +R+ + P +I T+ G Sbjct: 321 LLLFMRHPRQVLPKEIILQQIWGHNFTGDLNIVEVYIGYLRRKLQK----PSLIHTVRGV 376 Query: 62 GYRFC 66 GY F Sbjct: 377 GYLFE 381 >UniRef50_C4I5X0 DNA-binding response regulator n=78 Tax=Bacteria RepID=C4I5X0_BURPS Length = 232 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG I S+ +L +++ + T++V + R+RK + E+I T+ G Sbjct: 171 LETLIQHPGMILSKPQLEERLYSFSDEVGSNTIEVHVSRLRKKLGA-----ELIETVRGL 225 Query: 62 GYRFCGD 68 GYR D Sbjct: 226 GYRLRRD 232 >UniRef50_B2XT10 Transcriptional regulatory protein 1 n=3 Tax=Heterosigma akashiwo RepID=B2XT10_HETA2 Length = 231 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKP--HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F KI +R ++K++ G R VDV I ++R E P P+I+ TI Sbjct: 163 LKVFLLEKNKILTRKTIIKRVWGFNYSSHIDIRVVDVYISKLRVKIEDDPTNPQILKTIR 222 Query: 60 GEGYRF 65 G GY+F Sbjct: 223 GIGYKF 228 >UniRef50_C0YPJ5 DNA-binding response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YPJ5_9FLAO Length = 224 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K+ R E+L+K+ G ++ +RT+DV IRR+R+ I T+ G Sbjct: 164 LYLLASNTEKVFKREEILEKVWGNDVIVGERTIDVHIRRLREKLGINT-----IQTLKGI 218 Query: 62 GYRFC 66 GY+ Sbjct: 219 GYKLI 223 >UniRef50_C9PHD6 Transcriptional activator ToxR n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PHD6_VIBFU Length = 203 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P + SR ++ +++ R K D ++ +I +RK PE I T Sbjct: 40 ILTLLTSHPNAVLSREDIYQQVWVERGNKVDDSSLTQSISLLRKVLGDKATNPEYIKTEA 99 Query: 60 GEGYRFCGDLE 70 GYRF ++ Sbjct: 100 RIGYRFIAPVD 110 >UniRef50_A5CFS8 Transcriptional regulator n=1 Tax=uncultured marine microorganism RepID=A5CFS8_9ZZZZ Length = 191 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + G + +R +L+ + + + I +R P I T+ Sbjct: 42 VLMVLASHQGSVVTREQLVDAVWDGRFVADE-AIVAKIATLRHKLGDHAKNPTYIETVPR 100 Query: 61 EGYRF 65 GYR Sbjct: 101 RGYRL 105 >UniRef50_B1HT37 Transcriptional regulatory protein srrA (Staphylococcal respiratory response protein A) n=2 Tax=Bacillaceae RepID=B1HT37_LYSSC Length = 216 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTP-DTPEIIATIHGEG 62 F + K+ SR L+ + G + DRT+D +R +R+ + + + T+ G G Sbjct: 146 LFLDYQNKVFSREHLINTVWGYHVSIEDRTIDSHVRNLREKLRKSGFPADDYLQTVWGIG 205 Query: 63 YRF 65 Y++ Sbjct: 206 YKW 208 >UniRef50_C8WG99 Two component transcriptional regulator, winged helix family n=29 Tax=Bacteria RepID=C8WG99_EGGLE Length = 220 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +PG+ SR ++++ + G + + T+ V + R ++ P I T+ G Sbjct: 156 VCEFLARHPGQAFSRDQIVENVLGWDAESAASTISVHVANARAKLKAAGAEP--IDTVWG 213 Query: 61 EGYRFCG 67 GY++ Sbjct: 214 VGYKWTA 220 >UniRef50_P08368 Transcriptional regulatory protein creB n=64 Tax=Proteobacteria RepID=CREB_ECOLI Length = 229 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG++ SR +L+ + +DRTVD I+ +R + I T G Sbjct: 163 LKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGM 222 Query: 62 GYRFCG 67 GY G Sbjct: 223 GYSLRG 228 >UniRef50_Q8DHN5 Two-component response regulator n=2 Tax=Chroococcales RepID=Q8DHN5_THEEB Length = 229 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +I SR+ ++ + P + TV V +R +R ++ +I T++G Sbjct: 157 ILEVLLRHGSRILSRSAIMDYAWPLDEMPGEETVKVHLRSLRHKLKAVGAPANLIETVYG 216 Query: 61 EGYRFCGD 68 GYR + Sbjct: 217 FGYRLNPN 224 >UniRef50_D1SG74 Putative two component transcriptional regulator, winged helix family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SG74_9ACTO Length = 197 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E+P ++ +R +LL + G E RTVDV +RR+R F P+TP ++ T++G Sbjct: 126 LLFLAEHPRRVFTRLQLLANVWGYEHAVA-RTVDVHVRRLRAKFG--PETP-LVTTVYGV 181 Query: 62 GYRFCGD 68 GYR D Sbjct: 182 GYRLADD 188 >UniRef50_C7H9H0 Subtilin biosynthesis regulatory protein SpaR n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9H0_9FIRM Length = 226 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFEST--PDTPEIIATI 58 + + G+ ++ ++ + + G + D V I+ IR + P+ +++ T+ Sbjct: 156 ICEYLALHAGQTFTKEQIYEAVFGIDGTADDTAVTQHIKNIRSKLRAAGVPEPEKLLNTV 215 Query: 59 HGEGYRFCGDL 69 G GYR+ + Sbjct: 216 WGVGYRWKSED 226 >UniRef50_B5IMP1 Two-component response regulator n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IMP1_9CHRO Length = 227 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ + + R ++L + G +D +DV IR +R+ + P +I T+ G Sbjct: 164 LLYLLRHKQTVLPRQQILYAVWGDSWVGNDNLLDVYIRYLRRKIDPPGLEP-LIHTVRGV 222 Query: 62 GYRFC 66 G+ Sbjct: 223 GFCLE 227 >UniRef50_Q21HG9 Transcriptional regulatory protein-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21HG9_SACD2 Length = 225 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 28/69 (40%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P + S+ L R P +R++DV I RIR+ I ++ Sbjct: 149 LELLAQHPNTVLSKEYLCSHGLQRTYTPGERSIDVHISRIRQKLTDALGQTSPIKSVRNR 208 Query: 62 GYRFCGDLE 70 GY + E Sbjct: 209 GYIYSPPHE 217 >UniRef50_D1B9J7 Two component transcriptional regulator, winged helix family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9J7_THEAS Length = 226 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ SR +++ ++ +E VDV I+ +R ++ T+ G Sbjct: 157 ILELLMRYENQVFSRDKIIAQVWQKEYDGTSNVVDVHIKYLRDKLRPFNLD-MMVVTVRG 215 Query: 61 EGYR 64 GY+ Sbjct: 216 VGYK 219 >UniRef50_A8ZNT0 Two-component transcriptional regulator/diguanylate cyclase (GGDEF) n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZNT0_ACAM1 Length = 792 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 N ++ S +L+ + E P + V I+ +R+ +++ ++I T++G G Sbjct: 159 ELMMRNTRRVFSCGMILEHIWTYEDTPGEEAVRTHIKGLRQKLKASGAPTDLIETVYGIG 218 Query: 63 YRFCG 67 YR Sbjct: 219 YRLKP 223 >UniRef50_B9XE94 Two component transcriptional regulator, winged helix family n=2 Tax=Verrucomicrobiales RepID=B9XE94_9BACT Length = 224 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+I R +L+K+ + P VDV I+R+R+ P+++ T+ Sbjct: 158 LEFLMRTPGRICGRMAILEKVWDYDFDPGTNLVDVYIKRLREKV-DEGFEPKLLHTVRNV 216 Query: 62 GYRFCGD 68 GY Sbjct: 217 GYVMKEQ 223 >UniRef50_UPI0001C321CD putative two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321CD Length = 166 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ SR L + G+ + P DR VDV +R++R + I T + Sbjct: 78 LVELMRRPDEVLSRELLYELCWGQPMVPSDRAVDVYVRKLRSKLDRALPGWTFIHTHYRL 137 Query: 62 GYRFCGDLED 71 GYRF + Sbjct: 138 GYRFSPQPAE 147 >UniRef50_UPI0001C1726B Multi-component Transcriptional regulator, Winged helix family n=3 Tax=Nostocaceae RepID=UPI0001C1726B Length = 511 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P KI +R +++ K+ + P D V ++ +R + E+I T+HG Sbjct: 159 LELFLRHPQKIFTRGQIIDKLWSIDDSPTDGAVTNLVKDLRGKLKKAGMQEEVIETVHGL 218 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 219 GYRLTSKRE 227 >UniRef50_C9XJX9 Two-component system response regulator n=108 Tax=Firmicutes RepID=C9XJX9_CLODC Length = 222 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 5/69 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E ++ +R LL + G + R VD I+ IRK + I T+ G Sbjct: 159 ILKALIEKYPQVITREGLLDSIWGYDYYGDTRIVDAHIKNIRKKI-----SLPYIKTVKG 213 Query: 61 EGYRFCGDL 69 GY D+ Sbjct: 214 IGYTLEKDI 222 >UniRef50_D1VF89 Two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VF89_9ACTO Length = 306 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N + +RA+LL + G + ++ I +R+ P +I T+ G Sbjct: 241 LQFLLANARAVLTRAQLLDHVWGHDFSGEGGVLETYISYLRRKV--DNVEPPLIHTVRGV 298 Query: 62 GYRFC 66 GY Sbjct: 299 GYVLR 303 >UniRef50_Q1IUD6 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=Q1IUD6_ACIBL Length = 232 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +PGK+ LL + G + + V + ++RK E I T Sbjct: 160 LLYLARHPGKVVPHRTLLSSVWGADHAEQSEYLRVFVGQLRKKIEGENSNKRYILTERWI 219 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 220 GYRFIPEGE 228 >UniRef50_Q12PS6 Two component transcriptional regulator, winged helix family n=79 Tax=Proteobacteria RepID=Q12PS6_SHEDO Length = 243 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +PG++QS++ L + + ++ ++V IRR+RK + ++I T+ G+G Sbjct: 159 EFLMLHPGEVQSKSVLTEHIYDQDFDLDSNVIEVFIRRLRKKLDPDN-QYQLIETLRGQG 217 Query: 63 YRFCG 67 YR Sbjct: 218 YRLNP 222 >UniRef50_Q3Z753 DNA-binding response regulator n=2 Tax=Dehalococcoides RepID=Q3Z753_DEHE1 Length = 222 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F NPG + +R+ L + + G E T+D I+++R+ + I T+ G Sbjct: 157 ILEYFITNPGVLITRSMLEEHLWGAESTSVSNTIDSLIKKLRQKLGWDAKSGP-IKTLRG 215 Query: 61 EGYRFC 66 GYR Sbjct: 216 AGYRLD 221 >UniRef50_Q01473 Protein rcaC n=1 Tax=Fremyella diplosiphon RepID=RCAC_FREDI Length = 651 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 30/70 (42%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N + S ELL K+ E P + TV +RR+R + + IAT+HG Sbjct: 158 LELLLRNCQHVFSSEELLDKLWSSEDFPSEATVRSHVRRLRHKLVAAGAPHDFIATMHGR 217 Query: 62 GYRFCGDLED 71 GY + Sbjct: 218 GYYLKAPSTE 227 >UniRef50_Q0AKG2 Two component transcriptional regulator, winged helix family n=98 Tax=Alphaproteobacteria RepID=Q0AKG2_MARMM Length = 256 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK R ELL ++ G T++ I R+R+ E P ++ T G Sbjct: 191 ILKYLYRAGGKPVPRDELLHEVWGYNPAVTTHTLETHIYRLRQKIEPDPAHARLLVTESG 250 Query: 61 EGYRFCG 67 GYR Sbjct: 251 -GYRLQS 256 >UniRef50_D2YQP0 Transmembrane regulatory protein ToxR n=7 Tax=Vibrio RepID=D2YQP0_VIBMI Length = 280 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + P ++ SR +L + + + D ++ I +RK + + +P+ + T+ Sbjct: 43 ILWLLAQRPNEVVSRNDLHDFVWREQGFEVDDSSLTQAISTLRKMLKDSTKSPQYVKTVP 102 Query: 60 GEGYRFCGDLE 70 GY+ +E Sbjct: 103 KRGYQLITRVE 113 >UniRef50_C6LDD6 DNA-binding response regulator n=3 Tax=Clostridiales RepID=C6LDD6_9FIRM Length = 130 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + NP ++ + + + + + R + I ++RK PD P I ++ Sbjct: 62 ILALLIANPKRVFTYELITDLVWKEDCDFYSRKAIHNHISKLRKKLRFEPDLPNYIESVA 121 Query: 60 GEGYRFC 66 G GY+F Sbjct: 122 GIGYKFE 128 >UniRef50_B1IAB9 VncR, response regulator n=69 Tax=Firmicutes RepID=B1IAB9_STRPI Length = 218 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + +N G+ +R++++ + + P DR +DV I+ +RK + I T+ Sbjct: 155 ILDYLVKNEGRALTRSQIIDAVWKATDEVPFDRVIDVYIKELRKKLDLD-----CILTVR 209 Query: 60 GEGYRFC 66 GY+ Sbjct: 210 NVGYKLE 216 >UniRef50_Q3DCX6 DNA-binding response regulator n=7 Tax=Streptococcus agalactiae RepID=Q3DCX6_STRAG Length = 223 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H P +I +R ELL + G + +R VD I +IR+ E PD I T+ G Sbjct: 158 VLFHLLSYPNRIFTRLELLDSIWGMDTDLDERVVDACINKIRRKVEHLPD--FKIETVRG 215 Query: 61 EGYR 64 GYR Sbjct: 216 VGYR 219 >UniRef50_B5HT18 Repressor-response regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HT18_9ACTO Length = 246 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P + SR +L+ + E RTVD + +R I T+ G Sbjct: 157 ILLLLASAPETVISRRDLIAAVWADEWAISTRTVDTHVSALRAKLGE-----GWITTVRG 211 Query: 61 EGYRFC 66 GYR Sbjct: 212 VGYRLE 217 >UniRef50_Q01ZD3 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZD3_SOLUE Length = 221 Score = 80.6 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + SRAELL + RT+DV + +R+ E P P I T+ G Sbjct: 157 LRYLIAWRGSVLSRAELLDAVWQYRAT-TTRTLDVHVSLLRQKLEDAPHRPRHILTLRGR 215 Query: 62 GYRF 65 GY F Sbjct: 216 GYFF 219 >UniRef50_Q0K0A7 Response regulator, OmpR-family n=9 Tax=Bacteria RepID=Q0K0A7_RALEH Length = 247 Score = 80.6 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ +R +LL GRE + +R++D+ + R+R+H P I T+ E Sbjct: 173 LRVFVDHPQRVLNRDQLLSLTQGREAEMFERSIDLLVSRLRQHLRDDAREPRYIKTVRSE 232 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 233 GYVFSTPVE 241 >UniRef50_Q1ASD3 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD3_RUBXD Length = 241 Score = 80.6 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+++SR EL K++ G RT+DV IRRIR E + I T G Sbjct: 164 LAALASDPGELKSREELAKEVWGHAGVGSSRTIDVHIRRIRAALEKKSAY-DYIHTARGL 222 Query: 62 GYRFCGDLE 70 GYRF Sbjct: 223 GYRFEPVPR 231 >UniRef50_A4AF30 Two component transcriptional regulator, winged helix family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AF30_9ACTN Length = 241 Score = 80.6 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 3/73 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G+I S EL+ + V IR +R+ + P++I T G Sbjct: 165 VLEYLMRNAGRIVSSTELIDHAWDSNYEGFSNVVQTYIRYLRQKL-TAGGEPDVIETRRG 223 Query: 61 EGYRFC--GDLED 71 GY +E+ Sbjct: 224 SGYVIEQSEPVEE 236 >UniRef50_B0P857 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P857_9FIRM Length = 140 Score = 80.6 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 29/67 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +PG + S +++ + + R+ + V I +IR+ I T+ G Sbjct: 72 VLTYLARHPGWVFSASQIYEAVWDRDGEHCGTAVASVIGQIRRKLTPDTPKGGYIRTVPG 131 Query: 61 EGYRFCG 67 GY+F Sbjct: 132 SGYKFES 138 >UniRef50_B0MTN6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTN6_9BACT Length = 217 Score = 80.6 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ SR E+ ++ G + DRT+DV +R+IR+ I+T+ G Sbjct: 157 LALLASSPGKLFSREEIYSRIWGDSVVVGDRTIDVHVRKIRQKIGD-----GHISTVKGM 211 Query: 62 GYRFC 66 GY++ Sbjct: 212 GYKYE 216 >UniRef50_C8WKQ8 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=C8WKQ8_EGGLE Length = 237 Score = 80.6 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 N G++ S+ L+ K+ G E D V+ + +RK + T I T+ G Sbjct: 159 KVLMANAGQVVSKDMLIAKVWGVESSAEDNNVEAYVSFLRKKMKFLGSTAR-IETLRRAG 217 Query: 63 YRFCGD 68 YRF D Sbjct: 218 YRFVAD 223 >UniRef50_C6WIA6 Two component transcriptional regulator, winged helix family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WIA6_ACTMD Length = 244 Score = 80.6 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN ++++R +L ++ G E D VDV + +R+ + + IAT+ G Sbjct: 176 LAAITENTRQVRTRDQLRRRAWGEEWLADDHAVDVHVSNLRRKLVAAGAPRDFIATVRGV 235 Query: 62 GYRFCGDLE 70 GYR ++ Sbjct: 236 GYRVNQEVR 244 >UniRef50_C7ND40 Two component transcriptional regulator, winged helix family n=4 Tax=Fusobacteriaceae RepID=C7ND40_LEPBD Length = 226 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + SR ++L+++ G + +D +D+ I+ +R P + I T+ G Sbjct: 163 LDFLVLNKGIVLSRDKILEEVWGFDYIGNDNILDLYIKYLRDKI-DRPYERKFIQTVRGI 221 Query: 62 GYRF 65 G+ F Sbjct: 222 GFIF 225 >UniRef50_A0PNV3 Two component regulator-receiver domain n=6 Tax=Actinomycetales RepID=A0PNV3_MYCUA Length = 247 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+I S ++L + G + V V + +R+ E+ P I+ T+ G Sbjct: 182 LDFLVQQRGRIVSATQILNAVWGYDAY-DANLVQVHVSSLRRKLEAHG--PRIVQTVRGI 238 Query: 62 GYRFCGD 68 GYR Sbjct: 239 GYRLQPP 245 >UniRef50_C0QDS5 Two-component response regulator (OmpR-like protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDS5_DESAH Length = 226 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 35/64 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 E+P ++ +RA+L++K+ G ++RT+D I+ +RK +II + +G Sbjct: 160 IFSVLLESPNRVFTRAQLIEKVQGYNYDGYERTIDFHIKNLRKKIGVYLPGEKIIQSTYG 219 Query: 61 EGYR 64 GY+ Sbjct: 220 YGYK 223 >UniRef50_A9BIE2 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=A9BIE2_PETMO Length = 232 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N K+ +R E++ K+ + DR +DV I IR E I TI Sbjct: 158 ILDLLARNSEKVYTREEIIDKIWFGDEFITDRVIDVHISMIRSKIGK-----EWIKTIRN 212 Query: 61 EGYRFCGD 68 GY+F + Sbjct: 213 VGYKFNKN 220 >UniRef50_D2PKG5 Two component transcriptional regulator, winged helix family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PKG5_9ACTO Length = 226 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG + S ELL+ + P ++V VT+ +R+ + P ++ T+ G Sbjct: 159 VLRYLMSRPGHVVSAEELLEHVWDENADPFTQSVRVTVGTLRRKLTQEGEEP-LLETVIG 217 Query: 61 EGYRFCG 67 GYR G Sbjct: 218 RGYRLRG 224 >UniRef50_C3X641 Two component transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X641_OXAFO Length = 231 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ P ++ + +LLK + G + V + +RK E P + T G Sbjct: 162 ILIFMTSQPDRVITHQQLLKAIWGPGHTEDMHYIRVHMANLRKKIEENASMPRHLITEAG 221 Query: 61 EGYRFCG 67 GYRF Sbjct: 222 IGYRFVP 228 >UniRef50_C7Q2J4 Two component transcriptional regulator, winged helix family n=5 Tax=Actinomycetales RepID=C7Q2J4_CATAD Length = 254 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + +R ++L+ + G + +P ++DV + +RK E D P ++ T+ G Sbjct: 184 LEMFLSHPRQALTREQILRAVWGFDFEPASNSLDVYVMYVRKKTEFD-DLPRLVQTVRGV 242 Query: 62 GYRFCG 67 GY Sbjct: 243 GYALRT 248 >UniRef50_C5B7S6 Transcriptional activator CadC n=2 Tax=Enterobacteriaceae RepID=C5B7S6_EDWI9 Length = 548 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFEST-PDTPEIIATIHG 60 + +F +P + SR EL+ + R + V I +RK+ + P+ PE I T+ Sbjct: 37 LSYFAHHPDMVLSRDELIDNVWKRN-IVTNHVVTQCISELRKYLKDGRPEAPEYIVTVPK 95 Query: 61 EGYRFCGDL 69 GY+ + Sbjct: 96 RGYKLVESV 104 >UniRef50_B8IGE5 Two component transcriptional regulator, winged helix family n=7 Tax=Proteobacteria RepID=B8IGE5_METNO Length = 246 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ SR +LL GRE + DR++D+ + R+R+ P I T+ E Sbjct: 172 LRVFLDHPQRVLSRDQLLNLTQGREAELFDRSIDLLVSRLRQRLRDDAREPTYIKTVRSE 231 Query: 62 GYRFCGDL 69 GY F + Sbjct: 232 GYVFAMPI 239 >UniRef50_C8SEM3 Two component transcriptional regulator, winged helix family n=3 Tax=Rhizobiales RepID=C8SEM3_9RHIZ Length = 259 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L FC NPG++ SR ELL P +R+VDV + RIR+ E P ++ T+ Sbjct: 189 LLAFCRNPGRVLSREELLSVTHAGLAGPIERSVDVHVSRIRQKIEKDARDPVLLRTVRLG 248 Query: 62 GYRFCGDLED 71 GY F +E+ Sbjct: 249 GYIFTATVEE 258 >UniRef50_Q2JIE3 DNA-binding response regulator n=12 Tax=Cyanobacteria RepID=Q2JIE3_SYNJB Length = 269 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + G SR ELL++ + + RTVD I +RK E P P +I T+ Sbjct: 161 LMVLVQADGDPVSRLELLERAW-PDSTDNPRTVDTHILSLRKKLERDPRQPSLIHTVRNV 219 Query: 62 GYRF 65 GY F Sbjct: 220 GYCF 223 >UniRef50_C1FSZ1 Regulatory protein VanR n=16 Tax=Firmicutes RepID=C1FSZ1_CLOBJ Length = 228 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP + +R LL+K+ E + T+ I RIR E+ + + I T++G Sbjct: 160 LKILVKNPKIVLTRQMLLEKIWDVDENFVDEHTLTTVISRIRNKIEA--EETQYIKTVYG 217 Query: 61 EGYRFCGDLE 70 GY + GD Sbjct: 218 MGYMWIGDDR 227 >UniRef50_B6QXV6 Two component transcriptional regulator, winged helix family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QXV6_9RHOB Length = 230 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F ++PG + SR ++L R+ DR+VD I+R+R+ E P P I T Sbjct: 163 VLRFFAQSPGVVFSREDILAVARTRQHAGKDDRSVDTLIKRLRRKIEVEPSNPMHILTEW 222 Query: 60 GEGYRF 65 G+GY F Sbjct: 223 GKGYTF 228 >UniRef50_C8NDP1 DNA-binding response regulator n=2 Tax=Firmicutes RepID=C8NDP1_9LACT Length = 220 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + ++ G+ SR+++L + E P DR VDV I+++RK + I TI Sbjct: 157 ILKLLVKHEGQALSRSQILDHVWSNHEDPPFDRVVDVYIKQLRKKLKLD-----CIVTIK 211 Query: 60 GEGYRFC 66 GY+ Sbjct: 212 NVGYKLE 218 >UniRef50_C9ZA01 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZA01_STRSW Length = 248 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ + E+L ++ + R VD +R +R+ P++I T+ G Sbjct: 175 LVCLLAQPERVVGKKEILSEVWHYDFAGDARIVDTYVRNLRRKI--DRFEPQLIQTVRGV 232 Query: 62 GYRF 65 GY Sbjct: 233 GYCL 236 >UniRef50_C9YZ98 Putative two component response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YZ98_STRSW Length = 246 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + A + ++ G + P + + V + +R+ P P +I T+ G Sbjct: 181 LELLVRNAGIVLDHATIYDRIWGYDFGPGSKNLAVYVGYLRRKL-DEPGAPALIHTVRGV 239 Query: 62 GYRFCGD 68 GY D Sbjct: 240 GYALRED 246 >UniRef50_B2V1F5 Two component response regulator n=6 Tax=Bacteria RepID=B2V1F5_CLOBA Length = 232 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN + +R +L+K+ E + V I+R+R+ E TP +I T+ G Sbjct: 162 LQFLMENSPNVLTRNTILEKLWDIEGNYIDANALSVYIKRLREKVEYDSRTPTLIETVRG 221 Query: 61 EGYRFCGDL 69 GY++ + Sbjct: 222 VGYKWTPKV 230 >UniRef50_A5MZN8 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5MZN8_CLOK5 Length = 224 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S+A+L + + + +D ++ V + IRK + E I TI G Sbjct: 160 ILKIMLRHPKQVFSKAKLYELLWNDIYQGNDNSISVHVSNIRKKISAITSE-EYIKTIWG 218 Query: 61 EGYRFC 66 G+ Sbjct: 219 IGFSLV 224 >UniRef50_Q12S47 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S47_SHEDO Length = 762 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN GK+ S LL+ + T+ +I ++RK I T Sbjct: 35 VLTYLAENQGKVVSHDALLENVWQGT-VVSPNTLQRSIAQLRKALGDDGKVQVYIKTHAK 93 Query: 61 EGYRFCGDLE 70 +GY D+ Sbjct: 94 QGYSLECDVR 103 >UniRef50_B7IXR9 DNA-binding response regulator n=167 Tax=Bacilli RepID=B7IXR9_BACC2 Length = 225 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF-ESTPDTPEIIATIHG 60 + F + + SR +L++++ G DRTVD IR +R ++ + T++G Sbjct: 156 LGLFLRHVNYVLSRDQLIERIWGLNTNTEDRTVDSHIRNLRDKLRKANFPIDHHLKTVYG 215 Query: 61 EGYRFC 66 GYR+ Sbjct: 216 VGYRWI 221 >UniRef50_A6TSQ9 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiaceae RepID=A6TSQ9_ALKMQ Length = 236 Score = 80.2 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+ + SR+ LL+++TG + P R VDV IR IRK D+P+ I TI G Sbjct: 171 ILKKLAESLEHVLSRSLLLEEVTGEKSTPDLRIVDVHIRNIRKKLSDHNDSPKYIETIRG 230 Query: 61 EGYRF 65 GY+ Sbjct: 231 VGYKM 235 >UniRef50_Q6MHZ0 Two component response regulator n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHZ0_BDEBA Length = 224 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP KI + +LK++ + P VDV + R+R E T +I T+ G Sbjct: 159 LDLFMSNPNKIIGKQTILKEVWNYDFDPQTNVVDVLVCRLRNKLEKDFPT-RLIYTVRGV 217 Query: 62 GYRF 65 GY Sbjct: 218 GYVL 221 >UniRef50_A9FLR1 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FLR1_SORC5 Length = 235 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E ++Q+R LL + G ++ RTVD ++R+R + I T+ G Sbjct: 163 LVALYEARERVQTRTALLDGVWGIDVSITTRTVDTHVKRLRDKLRRAG---DYIQTVRGI 219 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 220 GYRFAASPD 228 >UniRef50_Q0EY91 Two comoponent transcriptional regulator, winged helix family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY91_9PROT Length = 227 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G++ S+ EL + G+ P DRT+DV I +RK + +T I T+ Sbjct: 160 ILTVLMQHAGEVVSKYELSQAALGKRHGPFDRTLDVHIGHLRKKISAADNTEARIKTVRS 219 Query: 61 EGYRFCGD 68 G+ F + Sbjct: 220 VGWLFVPE 227 >UniRef50_C1SI97 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SI97_9BACT Length = 236 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 +L+F G + SR +++ + G+ R++DV I+ +R+ E P P+I+ T+ Sbjct: 169 ILLYFVGKTGHVLSRDDIVNDIWGKNSIYSWSRSLDVHIKNLRQKIEINPKNPDIVKTVS 228 Query: 60 GEGYR 64 G GY+ Sbjct: 229 GVGYK 233 >UniRef50_B1I7Y4 Response regulator SaeR n=46 Tax=Firmicutes RepID=B1I7Y4_STRPI Length = 232 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHG 60 + NP ++ S+ +L +K+ + T++V I +R+ I T+ G Sbjct: 161 LWILASNPERVFSKTDLYEKIWKEDYVDDTNTLNVHIHALRQELAKYSSDQTPTIKTVWG 220 Query: 61 EGYRFCGD 68 GY+ Sbjct: 221 LGYKIEKP 228 >UniRef50_Q0I8A9 DNA-binding response regulator n=13 Tax=Cyanobacteria RepID=Q0I8A9_SYNS3 Length = 250 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + GK+ R+E++K + G + D +DV IR +R+ E D P +I T+ G Sbjct: 179 LCFLMRGNGKVLERSEIMKGVWGEDFYGDDNLLDVYIRYLRQKVE-NKDLPSLIHTVRGV 237 Query: 62 GYRFCGD 68 G+ + Sbjct: 238 GFILRDE 244 >UniRef50_C3JSB6 Two component transcriptional regulator, winged helix family n=2 Tax=Rhodococcus erythropolis RepID=C3JSB6_RHOER Length = 249 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ + G + S++E+ + G TV V ++R+R+ S + I TI G Sbjct: 182 LVYLIKRRGHVASQSEISLAVWG--HSAETNTVAVHVKRLREKLGSDTQHGQFIRTIRGA 239 Query: 62 GYRFCG 67 GYR Sbjct: 240 GYRLAP 245 >UniRef50_C1ACD7 OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ACD7_GEMAT Length = 240 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ S +L + RE V V I +R+ E P +I T G Sbjct: 173 LRALVLHAGRPMSPRQLWDIVWDREFGDFATHVRVHITHLRRKIEPDASMPRLIITEPGV 232 Query: 62 GYRFCGD 68 GYRF Sbjct: 233 GYRFNAP 239 >UniRef50_B1WTP9 Two-component response regulator n=12 Tax=Cyanobacteria RepID=B1WTP9_CYAA5 Length = 248 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ R++L+ + G + +R VDV I +IRK ++I T+ G Sbjct: 180 LYFLATHPNRVWERSDLIAAVWGNHHEIGAERKVDVHIGQIRKKINDI--QGKLIKTVRG 237 Query: 61 EGYRFC 66 +GY F Sbjct: 238 KGYLFE 243 >UniRef50_Q2BRQ1 Transcriptional regulatory protein CpxR (Fragment) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRQ1_9GAMM Length = 235 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 35/68 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G + + +L + + R+L +DR +DV + R+R+ E+I TI G Sbjct: 166 VLAYLIANAGSVLEKEQLTELVLHRKLAAYDRAIDVHVSRVRQKLAKHLSDAELIKTIRG 225 Query: 61 EGYRFCGD 68 GY+F D Sbjct: 226 VGYQFVKD 233 >UniRef50_Q2J4Y7 Two component transcriptional regulator, winged helix family n=3 Tax=Frankia RepID=Q2J4Y7_FRASC Length = 244 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR ELL+++ G + TV +RR+R E P ++ T+ G Sbjct: 180 LAFLARHPRRVFSREELLEQVWGTRFQ-DPATVTEHVRRVRTKVEGRPPQRRLVTTLRGM 238 Query: 62 GYRFCG 67 GYRF Sbjct: 239 GYRFDP 244 >UniRef50_B7RXJ1 Response regulator receiver domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXJ1_9GAMM Length = 219 Score = 79.8 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ++ ++ R LL ++ R P+DR++DV + ++RK + + E I TI G Sbjct: 149 ILLALLKSNNRVLPRDFLLNAISSRNWTPYDRSIDVLVGKLRKKLQ--CENGEYIKTIRG 206 Query: 61 EGYRFCGDL 69 +GY+FC + Sbjct: 207 QGYKFCSAV 215 >UniRef50_A4YSP3 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YSP3_BRASO Length = 1015 Score = 79.8 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++H E G++ ++ ELL + ++ + ++ VTI +R + +P I T+ Sbjct: 36 VLVHLVERAGELVTKEELLNAVW-SDVHVSESSLSVTINALRTALDDNKQSPRYIETVPR 94 Query: 61 EGYRFCGDLE 70 GYRF +E Sbjct: 95 RGYRFIAAVE 104 >UniRef50_Q6AQP4 Probable two-component system response regulator (Pho family) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQP4_DESPS Length = 224 Score = 79.8 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ EN G S+ +L+K+ G P VDV + R+R ++I TI G Sbjct: 159 LLYMAENAGTALSKTSILEKVYGYNFDPQTNVVDVLVCRLRAKI-DKGFGQQLIQTIRGV 217 Query: 62 GYRFCG 67 GY Sbjct: 218 GYVLRS 223 >UniRef50_B8HC02 Two component transcriptional regulator, winged helix family n=12 Tax=Actinomycetales RepID=B8HC02_ARTCA Length = 224 Score = 79.8 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + +R ++L + G R++DV + +R + P I + G Sbjct: 160 LALLARHAGSVVTREQILDALWGDAFLASSRSLDVHLTGLRAKLQ----MPGFIINVRGV 215 Query: 62 GYRFCGD 68 GYR D Sbjct: 216 GYRVEAD 222 >UniRef50_Q020N6 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q020N6_SOLUE Length = 250 Score = 79.8 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G+ +R EL + R P++R++DV I +RK E + +I TI G Sbjct: 183 ILEILVRSAGRTVTRDELTAVLYQRPATPYERSLDVHISHLRKKLERDDRS--VIRTIRG 240 Query: 61 EGYRFCGDLE 70 GY+F Sbjct: 241 VGYQFMAGER 250 >UniRef50_C1D3W6 Putative response regulator n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3W6_DEIDV Length = 592 Score = 79.8 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P ++ SR L G D V+V I +R+ P ++ T+ G+ Sbjct: 524 LAVLMQHPHQVFSRERLAAAAWGEVRLESDPLVNVHISNLRRKLLRLHPDP-LVHTVRGQ 582 Query: 62 GYRFCGDLE 70 GY G E Sbjct: 583 GYSLQGAAE 591 >UniRef50_A1VSF0 Two component transcriptional regulator, winged helix family n=4 Tax=Betaproteobacteria RepID=A1VSF0_POLNA Length = 246 Score = 79.8 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + P +I R +L R+L DR+VDV + R+R+ ES P P I T++G Sbjct: 179 LLQFLQRPNRILDREQL---CGDRDLSALDRSVDVRVSRLRRKLESDPQHPTTIRTVYGA 235 Query: 62 GYRFCGDLE 70 GY ++ Sbjct: 236 GYLLAAEVR 244 >UniRef50_A8ZMT3 Transcriptional regulatory protein, C terminal domain n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMT3_ACAM1 Length = 68 Score = 79.8 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 3 LHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +PG +R+E L K+ G E + +DV I +R+ + + P++I T+HG Sbjct: 2 ELLATHPGVPIARSEFLDKVWGYSRETNIDTQVIDVHISHLRRKLGDSCERPKLIHTVHG 61 Query: 61 EGYRF 65 GY Sbjct: 62 VGYAL 66 >UniRef50_D1AQD9 Two component transcriptional regulator, winged helix family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQD9_SEBTE Length = 226 Score = 79.8 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F +N ++ +R + +K+ + VDV I +R +II T+ G Sbjct: 162 LEYFLKNKNRVLTRTMISEKIWDIDFITESNIVDVYINFLRSKI-DKGYDKKIIKTVRGV 220 Query: 62 GY 63 GY Sbjct: 221 GY 222 >UniRef50_C7MDU8 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=19 Tax=Actinobacteridae RepID=C7MDU8_BRAFD Length = 279 Score = 79.8 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L PG + +R +LL + RTVD ++ +R+ S ++ T+HG Sbjct: 180 LLCLANAPGTVLTREQLLADVWDWVDATGTRTVDSHVKALRRKLGSD-----LVRTVHGV 234 Query: 62 GYRFCGDLE 70 GY + Sbjct: 235 GYALEIPED 243 >UniRef50_D1C556 Two component transcriptional regulator, winged helix family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C556_SPHTD Length = 240 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG++ +LL ++ G E + + +R +R+ E P P + T G Sbjct: 167 LVALARRPGRVIPHDQLLTEVWGAEYRDEVEYLRTYMRYLRQKLERNPTRPTHLLTEPGV 226 Query: 62 GYRFCGDLED 71 GY + E+ Sbjct: 227 GYVLAAEPEN 236 >UniRef50_A1SMF6 Transcriptional regulator domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SMF6_NOCSJ Length = 142 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 E G++ +R +L++ + +T+DV + +R+ P +I TI GEG Sbjct: 73 RALMERAGEVVTRDDLMRDVWHTTFWTSSKTIDVHLGWVRRKLGDDSRHPRLITTIRGEG 132 Query: 63 YRFCGDLE 70 RF + Sbjct: 133 LRFETEDR 140 >UniRef50_UPI0001C35523 two component transcriptional regulator, winged helix family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35523 Length = 303 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L NPG+I S +EL +++ + TV V + R+R E I T+ GEG Sbjct: 231 LFLLGNPGRILSASELYQEVWRTGKPDNANTVAVHMTRLRHKLEEAEPVIGRIETVRGEG 290 Query: 63 YRFCGDLE 70 YRF +E Sbjct: 291 YRFLPKVE 298 >UniRef50_C6J108 Multi-component transcriptional regulator n=2 Tax=Bacillales RepID=C6J108_9BACL Length = 248 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 ++ + SR EL+ + G E + R VD I+ IR+ + I T+ G GY+ Sbjct: 178 LAKSEQRAFSREELVNLIWGDEYEGEVRVVDTHIKNIREKTQKAGLGYNPIQTVWGVGYK 237 Query: 65 FCG 67 F G Sbjct: 238 FNG 240 >UniRef50_A8SYK9 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8SYK9_9FIRM Length = 253 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN GK+ +R LL + G + + DR VD +R++R S I T+ G Sbjct: 189 ILKILLENKGKVITRERLLVDIWGYDYEGSDRCVDNHVRKLRAGIGSAGKQ---IKTVIG 245 Query: 61 EGY 63 +GY Sbjct: 246 KGY 248 >UniRef50_B4CUK8 Two component transcriptional regulator, winged helix family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUK8_9BACT Length = 241 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E P +Q+R +LL ++ G E +R+VD +RR+R + I T++G Sbjct: 179 LATLAERPNVVQTRDKLLTEVWGNENAIENRSVDTYLRRLRNKLGEAG---QHIKTVYGF 235 Query: 62 GYR 64 GYR Sbjct: 236 GYR 238 >UniRef50_Q47YY9 DNA-binding response regulator BaeR n=9 Tax=Bacteria RepID=Q47YY9_COLP3 Length = 232 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 34/65 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+I SR++L+ ++ +RT+D I+++RK + E++ +++ Sbjct: 166 LNILASAPGRIYSRSQLIDRVYQDNRVVSERTIDSHIKKLRKKLNAIESDNELVQSVYSV 225 Query: 62 GYRFC 66 GY+ Sbjct: 226 GYKLV 230 >UniRef50_Q47PT2 Similar to Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Thermobifida fusca YX RepID=Q47PT2_THEFY Length = 206 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H PG++ +R ELL ++ E R+VDV + RIR+ + E + T+ Sbjct: 143 LAHLASAPGRVFTRQELLDQVWDPEAHTTARSVDVHVHRIRRKLGALG---ERLVTVRRV 199 Query: 62 GYRFCG 67 GY + Sbjct: 200 GYVYRP 205 >UniRef50_C6LHZ3 Regulatory protein VanR n=2 Tax=Clostridiales RepID=C6LHZ3_9FIRM Length = 224 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G R+ L+ + G + + V ++R+R E P I TI+G Sbjct: 158 LRILVENRGAAIRRSYLIDTVWQGDTEYVDEHALTVAVKRLRDKLEDDSANPAYIKTIYG 217 Query: 61 EGYRFC 66 GY + Sbjct: 218 IGYMWA 223 >UniRef50_A0QHS7 Two component system response regulator n=6 Tax=Actinomycetales RepID=A0QHS7_MYCA1 Length = 239 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E G+I S ++L + G + V V + +R+ E+ P I+ T+ G Sbjct: 173 VLTFLVEQRGRIVSAGQILNGVWGYDAY-DPNLVQVHVSGLRRKLEAHG--PRILHTVRG 229 Query: 61 EGYRFCGD 68 GYR + Sbjct: 230 IGYRLQPE 237 >UniRef50_A4T1Y6 Response regulator receiver protein n=8 Tax=Mycobacterium RepID=A4T1Y6_MYCGI Length = 292 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG+ + L + + G + V + +R+ P P + T+ G Sbjct: 226 ILRALSDNPGEPVTCRRLQESLWGASHPGGRAALGVHVGNLRRKLGDDPTCPRYVRTVRG 285 Query: 61 EGYRFCG 67 GY G Sbjct: 286 IGYCLVG 292 >UniRef50_B6R2K8 Two component transcriptional regulator, winged helix family n=3 Tax=Proteobacteria RepID=B6R2K8_9RHOB Length = 258 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENP + R ELL+ + G + DRTVDV I R+R+ E+ P P + T G+ Sbjct: 185 LEFLIENPNRPIDRVELLEHLGGDLSRYMDRTVDVLILRLRRKIEANPSKPVFLQTRRGK 244 Query: 62 GYRFCGDL 69 GY F + Sbjct: 245 GYVFALED 252 >UniRef50_C6D1N2 Two component transcriptional regulator, winged helix family n=3 Tax=Bacillales RepID=C6D1N2_PAESJ Length = 232 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ NP ++ SR LLKK+ RTVD+ I+R+RK +I TI+G Sbjct: 164 LVELACNPDQVYSRKVLLKKVWDIHYAGGTRTVDIHIQRLRKKLGRWHG---LIQTINGI 220 Query: 62 GYRFCGDLED 71 GY+F D Sbjct: 221 GYKFISKPPD 230 >UniRef50_Q0VLF7 DNA-binding heavy metal response regulator, putative n=2 Tax=Alcanivorax RepID=Q0VLF7_ALCBS Length = 239 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 36/67 (53%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 + +N GK+ SRA LL+K+ G RTVDV I RIR+ + P+ I T++ GY Sbjct: 173 YLFQNVGKLMSRAHLLEKVWGIMTPIESRTVDVHISRIRRSLQIRPERGYRIKTVYQHGY 232 Query: 64 RFCGDLE 70 R E Sbjct: 233 RLEPIEE 239 >UniRef50_A5GMH0 Two-component sytem response regulator n=10 Tax=Chroococcales RepID=A5GMH0_SYNPW Length = 231 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E G + R +L+++ E ++V +R +R+ E +I TI G Sbjct: 159 LMLLMEERGTVVGRDRILREVWNDEQGASSNVIEVYVRYLRQKLEE-GGDSRLIHTIRGR 217 Query: 62 GYRFC 66 GY Sbjct: 218 GYCLN 222 >UniRef50_C1I8T8 Two-component system response regulator n=2 Tax=Clostridium RepID=C1I8T8_9CLOT Length = 226 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N KI SR E+++ + + D T+ V I R+RK E + + T G Sbjct: 160 ILYVLIKNKEKIVSRNEIIESLWQSDEFVDDNTLTVNINRLRKKLEEIGA-IDYLKTKRG 218 Query: 61 EGYRFCGD 68 +GY D Sbjct: 219 QGYILICD 226 >UniRef50_P76340 Probable transcriptional regulatory protein yedW n=131 Tax=Proteobacteria RepID=YEDW_ECOLI Length = 223 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+I R + ++ G TVDV IRR+R P ++IATI G Sbjct: 156 LWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKV-DDPFPEKLIATIRGM 214 Query: 62 GYRFCG 67 GY F Sbjct: 215 GYSFVA 220 >UniRef50_Q2RYR0 Response regulator receiver domain protein n=2 Tax=Rhodothermaceae RepID=Q2RYR0_SALRD Length = 247 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ SR + +++ G + +DV + +R+ + I T+ G Sbjct: 163 LAFLMARHGQALSRDTIHQEVWGHDFDRGTNLIDVYVNYVRRKLDEVGCEAP-IETVRGI 221 Query: 62 GYRFCG 67 GYR+ Sbjct: 222 GYRYTA 227 >UniRef50_Q1IUY4 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUY4_ACIBL Length = 232 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G+ SR L+ + G + + T+D IR +R+ T P++I T+ G Sbjct: 158 LQKLMQNAGRPVSRQSLIGNVWGYDRAIENNTLDAFIRLLRQKV-DTQGHPKLIQTVRGF 216 Query: 62 GY---RFCGDLED 71 GY + GD ++ Sbjct: 217 GYSARKLSGDDQE 229 >UniRef50_C0QZY4 OmpR n=2 Tax=Brachyspira RepID=C0QZY4_BRAHW Length = 228 Score = 79.4 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN + R +L+++ G + RT+D+ I+ IR+ + T + I T+ G Sbjct: 164 LKLLMENANNVVDRETMLEEVWGVDHTMETRTIDMHIKSIRQKLDLTKEN---IITVRGM 220 Query: 62 GYRFC 66 GY+ Sbjct: 221 GYKLT 225 >UniRef50_Q5LZ35 Response regulator (Homolog to RR01Spn & Sth) n=122 Tax=Bacteria RepID=Q5LZ35_STRT1 Length = 226 Score = 79.4 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G I SR +L+K++ + D T+ V + R+RK E+ + I T G Sbjct: 159 ILQVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLK-DFIETKKG 217 Query: 61 EGYRFCGD 68 GY D Sbjct: 218 VGYGLRHD 225 >UniRef50_A8L7H2 Putative two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EAN1pec RepID=A8L7H2_FRASN Length = 124 Score = 79.4 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE----LKPHDRTVDVTIRRIRKHFESTPDTPEIIA 56 + + NPG++ SR ELL+++ ++ RTVDV I R+R+ + I Sbjct: 42 VLDYLVRNPGRVHSREELLREVWRQDPGALGASAPRTVDVMITRLRRKLGRH--HRDHIE 99 Query: 57 TIHGEGYRFCGDLED 71 T+ GYR+ ++ Sbjct: 100 TVRRVGYRYRPAGDE 114 >UniRef50_Q98AP0 Phosphate regulatory protein n=2 Tax=Mesorhizobium loti RepID=Q98AP0_RHILO Length = 234 Score = 79.4 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H E PGK+ SR EL+ + RTVDV I R+R+ E+ T +I T+ Sbjct: 166 VLRHLLEAPGKVFSRDELIGGAWPANIHVGVRTVDVHISRLRRALEAA-STGIVIRTVRS 224 Query: 61 EGYRFCG 67 GY Sbjct: 225 AGYSLEK 231 >UniRef50_Q893J9 Transcriptional regulatory protein n=1 Tax=Clostridium tetani RepID=Q893J9_CLOTE Length = 159 Score = 79.4 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F N K+ SR E+L K+ G T+ V I+RIR E PE I T Sbjct: 88 IL-IFMTNAKKVMSREEILNKLIEGEGSYFDTNTLSVYIKRIRDKIEEDSSNPEYIKTKR 146 Query: 60 GEGYRFCGDLE 70 G GY + ++E Sbjct: 147 GIGYEWSLEVE 157 >UniRef50_C9NBD5 Two component transcriptional regulator, winged helix family n=6 Tax=Streptomyces RepID=C9NBD5_9ACTO Length = 230 Score = 79.4 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG + R +++ ++ + RT++V + +R P ++ T+ G Sbjct: 166 LALLAQRPGVVFRREQIISEVWRTSWEGTGRTLEVHVASLRSKLRL----PALVETVRGV 221 Query: 62 GYRFCGD 68 GYR Sbjct: 222 GYRLVPP 228 >UniRef50_B2TMQ5 Regulatory protein VanR n=5 Tax=Clostridium RepID=B2TMQ5_CLOBB Length = 229 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ +R LL+K+ + + T+ V I R+R E + + I TI+G Sbjct: 159 LKILISNKGQVLTRQVLLEKLWDCDRNFVDEHTLTVNINRLRNKIE--TENVKYIKTIYG 216 Query: 61 EGYRFCG 67 GY + G Sbjct: 217 MGYMWVG 223 >UniRef50_C4ZB82 Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZB82_EUBR3 Length = 231 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHD-RTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +NP +I + + + + + TV V I+ +R I T Sbjct: 165 ILKLLMKNPDRIYTIEMIYEMVWDEAFTYNAKNTVMVHIKNLRNKLIKACGDA-CIHTEW 223 Query: 60 GEGYRFC 66 G GYRF Sbjct: 224 GRGYRFE 230 >UniRef50_D2LS32 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LS32_BACS4 Length = 251 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N GK+ +R EL+K+++G + +R +DV I RIR E + P + T+ Sbjct: 170 LYYLFLNKGKVLTRMELMKELSGESDELDERIIDVFISRIRTKIEPSRKNPIYLKTVRNL 229 Query: 62 GYRF 65 GY Sbjct: 230 GYMM 233 >UniRef50_Q0KAU9 Response regulator, OmpR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0KAU9_RALEH Length = 204 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 38/68 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ +R +LL GRE + +R+VD+ + R+R+H + P I T+ E Sbjct: 130 LRVFVDHPQRVLNRDQLLSLTQGREAEMFERSVDLLVSRLRQHLKDDAREPRYIKTVRSE 189 Query: 62 GYRFCGDL 69 GY F + Sbjct: 190 GYVFSMPV 197 >UniRef50_A9F790 Two component system transcriptional regulatory protein n=34 Tax=Proteobacteria RepID=A9F790_SORC5 Length = 234 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + GK+ + +LL ++ G + V + ++R E P P I+ T G Sbjct: 168 LTTLIRHAGKVLTHRQLLGEVWGPAYAGQAHYLRVYMAQLRHKLERDPARPLILITEPGV 227 Query: 62 GYRFCGD 68 GYR G Sbjct: 228 GYRLKGP 234 >UniRef50_A8HY28 Response regulator receiver n=2 Tax=Alphaproteobacteria RepID=A8HY28_AZOC5 Length = 228 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +PG++ + ++L + G + + V + ++R+ E P TP +I T G Sbjct: 163 LVYLARHPGRVLTHRQILGAVWGPAHLDDTQYLRVYVGQLRQRLEVEPATPTLILTEPGI 222 Query: 62 GYRFC 66 GYR Sbjct: 223 GYRMA 227 >UniRef50_Q21N82 Response regulator receiver n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21N82_SACD2 Length = 231 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 32/64 (50%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 H N GK+ SR LLK + G + RTVD+ + R+R+ PD I TI+ GY Sbjct: 163 HLLSNVGKVLSREYLLKAVWGVSADLNTRTVDMHVSRVRRSLGINPDMGYCITTIYQHGY 222 Query: 64 RFCG 67 R Sbjct: 223 RLEK 226 >UniRef50_A8EX60 Two-component response regulator n=2 Tax=Epsilonproteobacteria RepID=A8EX60_ARCB4 Length = 221 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 L EN KI SR ++L + ++ +RT+D+ I IR P+ I ++ G Sbjct: 156 IFLFLIENQNKISSREQILNA-SSLDINTKNRTIDMHISNIRFKIGDDSKNPKYIKSVWG 214 Query: 61 EGYRFCG 67 GY+F G Sbjct: 215 IGYKFVG 221 >UniRef50_A6VRR3 Two component transcriptional regulator, winged helix family n=2 Tax=Gammaproteobacteria RepID=A6VRR3_MARMS Length = 243 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 37/70 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L N G +R +L+ ++ R DRT+DV I RIR+ P P++I T+HG Sbjct: 172 LLALKANEGVALTRDQLMDRIKNRTWNATDRTIDVLIGRIRRKLSEDPHCPQMIITVHGV 231 Query: 62 GYRFCGDLED 71 GY + +D Sbjct: 232 GYLLSNNPQD 241 >UniRef50_A0AHH4 Complete genome n=7 Tax=Listeria RepID=A0AHH4_LISW6 Length = 220 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ N K+ +R +L ++ ++ ++ +RK E I TI G Sbjct: 159 ILVLLIRNQKKVITREMILSQVWDFAAIVDTSIINTHMKNLRKKL-----HTEKIRTIRG 213 Query: 61 EGYRFC 66 GY+ Sbjct: 214 AGYKMD 219 >UniRef50_C7VU49 Subtilin biosynthesis regulatory protein SpaR n=1 Tax=Enterococcus faecalis Fly1 RepID=C7VU49_ENTFA Length = 228 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 28/70 (40%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + S+ +L + + G + + TV I++IR I T +G Sbjct: 158 VIEKLISNIGNVISKDQLFETIWGYDSESSLSTVTEHIKKIRSKIAEYDSNFTYIQTKYG 217 Query: 61 EGYRFCGDLE 70 GY + E Sbjct: 218 LGYVWEPKYE 227 >UniRef50_C1AAZ5 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAZ5_GEMAT Length = 239 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E G++Q R LL+ + RTVD+ ++R+R + E+I T+ G Sbjct: 171 LLTLAERRGRVQGRGHLLETVWEAAPDIQTRTVDMHVQRLRSKLGAAG---ELIETVRGF 227 Query: 62 GYRFCG 67 GYR Sbjct: 228 GYRLRA 233 >UniRef50_Q2P1E0 VirG-like two component response regulator n=13 Tax=Proteobacteria RepID=Q2P1E0_XANOM Length = 259 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + PG+ SR L++ DR++DV I R+R+ E P P +I T G Sbjct: 189 LRAFVDAPGRPLSREHLMRATR-LHEDVFDRSIDVQILRLRRKLEQDPREPTLIVTQRGA 247 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 248 GYVFTPSVE 256 >UniRef50_C0YVQ4 Response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YVQ4_9FLAO Length = 224 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 EN K+ SR ++L + G + VDV I IR +II T+ G GY Sbjct: 163 FLMENKNKVLSRTQILHNVWGIDFDNTTNVVDVYISYIRNKI--DETEQKIIHTVKGTGY 220 >UniRef50_C1F3P9 Transcriptional regulator, putative n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3P9_ACIC5 Length = 588 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+PG++ S E+L + E + + + +RK P+ I T+ Sbjct: 32 VLEYLVEHPGRLISHDEILDALW-PETFVQPQILRTYMLDLRKVLGDDAAEPKYIETLPK 90 Query: 61 EGYRFCGDL 69 GY+F + Sbjct: 91 RGYQFVAAV 99 >UniRef50_B1ZUL4 Two component transcriptional regulator, winged helix family n=2 Tax=Verrucomicrobia RepID=B1ZUL4_OPITP Length = 226 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG++ SR EL +++ R+ + RTV++ I R+RK + +I T+ Sbjct: 158 VLQVLMQEPGRVFSRTELCERVWQRDHQYDTRTVEIFIARLRKKV-DSGFNAPLIHTLRS 216 Query: 61 EGYRFCGDL 69 GY G + Sbjct: 217 IGYTIRGPV 225 >UniRef50_A3PND2 Two component transcriptional regulator, winged helix family n=4 Tax=Rhodobacter sphaeroides RepID=A3PND2_RHOS1 Length = 233 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ SR +++ + GR+ + +DR VD + R+R+ ++ I T+HG Sbjct: 168 LAALLGRRGQVLSRDQIMNAIKGRQWESYDRVVDGIVSRLRRKLPASRSGSPFIRTVHGV 227 Query: 62 GYRFCG 67 GY F G Sbjct: 228 GYTFAG 233 >UniRef50_Q1ISH8 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ISH8_ACIBL Length = 619 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ ++ +R E+++K+ +L +R ++ +R+IR PD P + T+ G Sbjct: 66 LMFLVSRREQMVTREEIIRKIWRTDLFIDAERNLNNIVRKIRTALGDDPDRPRFLETVVG 125 Query: 61 EGYRFCGDLE 70 GYRF G + Sbjct: 126 VGYRFIGPMR 135 >UniRef50_C6LDQ2 DNA-binding response regulator YycF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDQ2_9FIRM Length = 228 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F EN G + +R +L + G + RTVD ++++RK I +++G Sbjct: 161 LVYFIENSGIVLARNNILDAVWGYDYVGDIRTVDTLVKQLRKKLTE---ECTYIKSVYGV 217 Query: 62 GYRF-CGDLED 71 GY F G+ E+ Sbjct: 218 GYLFGEGNYEE 228 >UniRef50_Q7NGT9 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NGT9_GLOVI Length = 234 Score = 79.0 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+ ++ SR +L + G V+V IR +R E + ++I T+ Sbjct: 170 LHYLIEHAREVLSRERILLNVWGESFDGESNIVEVYIRYLRLKIEREGEK-KLIHTVRSV 228 Query: 62 GYRFC 66 GY Sbjct: 229 GYSLR 233 >UniRef50_C9XT65 Two-component response regulator n=18 Tax=Bacteria RepID=C9XT65_CLODC Length = 232 Score = 79.0 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ GK+ + ++K++ G + +++ V + +R+ E P P I T G Sbjct: 165 ILSLLAKHHGKVLTHNFIIKEIWGSVIGNETKSLRVFMATLRRKIEKQPANPRYIITEVG 224 Query: 61 EGYRFCGD 68 GYR + Sbjct: 225 VGYRLNDE 232 >UniRef50_A5FEG3 Two-component transcriptional regulator, winged helix family n=4 Tax=Bacteroidetes RepID=A5FEG3_FLAJ1 Length = 224 Score = 79.0 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G+I SR ++L + + VDV I +RK P ++I T+ G Sbjct: 160 LYYLGKNAGRIVSRDQILDNVWDINFDMNTNVVDVYITYLRKKV-DKPFKTKLIHTMKGL 218 Query: 62 GYRFCG 67 GY Sbjct: 219 GYVIKP 224 >UniRef50_A8EVJ9 DNA-binding response regulator n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVJ9_ARCB4 Length = 221 Score = 79.0 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ +I R +LL + + DR++D I+ IR P+ + T +G Sbjct: 157 ILSFLIKHKNQIVKREKLLDFL--SSIIQSDRSLDYHIKNIRIKLGDNGANPKYLLTEYG 214 Query: 61 EGYRFC 66 GY+ Sbjct: 215 VGYKLV 220 >UniRef50_B0G6A1 Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A1_9FIRM Length = 113 Score = 79.0 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 29/66 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG ++ ++ + + + + V+ TI +IRK + I T+ G Sbjct: 47 VLYMLYSNPGMAFTKQQIYEAVWHEKANGYFHAVENTIFQIRKKIKKYSSDKNYIKTVVG 106 Query: 61 EGYRFC 66 GY+F Sbjct: 107 YGYKFE 112 >UniRef50_B5WI25 Two component transcriptional regulator, winged helix family n=1 Tax=Burkholderia sp. H160 RepID=B5WI25_9BURK Length = 240 Score = 79.0 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 25/66 (37%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + + +RA L + + H +D+ I ++R+ +I T+ Sbjct: 173 LKYLMLHTEQPVTRAMLFESVWNYHFNVHTNVIDMHIGQLRRKISLNGRFSLMIHTVRNV 232 Query: 62 GYRFCG 67 GY Sbjct: 233 GYVLRA 238 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P94504 Transcriptional regulatory protein yvrH n=5 Tax=... 116 3e-25 UniRef50_A8F5W8 Two component transcriptional regulator, winged ... 112 3e-24 UniRef50_Q65F19 Two-component response regulator YvrH n=85 Tax=F... 111 6e-24 UniRef50_B2J8Q5 Two component transcriptional regulator, winged ... 110 2e-23 UniRef50_Q1AZ24 Two component transcriptional regulator, winged ... 109 2e-23 UniRef50_D2Q6K7 Response regulator-like transcriptional regulato... 109 4e-23 UniRef50_B7GTW3 Response regulator receiver protein n=6 Tax=Bifi... 108 6e-23 UniRef50_C8VW64 Two component transcriptional regulator, winged ... 108 6e-23 UniRef50_Q2RZP5 Response regulator DrrA n=11 Tax=Bacteria RepID=... 107 9e-23 UniRef50_Q1IMA9 Two component transcriptional regulator, winged ... 107 1e-22 UniRef50_Q05943 Transcriptional regulatory protein glnR n=102 Ta... 107 1e-22 UniRef50_C6JFQ6 Putative uncharacterized protein n=1 Tax=Ruminoc... 107 1e-22 UniRef50_Q8DLA7 Two-component response regulator n=20 Tax=Bacter... 107 1e-22 UniRef50_Q7NMA6 Two-component response regulator n=2 Tax=Bacteri... 107 1e-22 UniRef50_A4J267 Two component transcriptional regulator, winged ... 107 2e-22 UniRef50_Q2BDN1 Two component transcriptional regulator, winged ... 107 2e-22 UniRef50_A6EAJ4 Response regulator (CheY-like receiver domain an... 106 2e-22 UniRef50_C9KKD5 Alkaline phosphatase synthesis transcriptional r... 106 2e-22 UniRef50_C3KZU0 DNA-binding response regulator n=14 Tax=Firmicut... 106 2e-22 UniRef50_A8FHC6 Response regulator n=3 Tax=Bacillus RepID=A8FHC6... 106 2e-22 UniRef50_UPI0001C164FC Two component Transcriptional regulator, ... 106 2e-22 UniRef50_C3IWQ5 Two-component response regulator n=2 Tax=Bacillu... 105 3e-22 UniRef50_C1F3E6 Response regulator DrrA n=1 Tax=Acidobacterium c... 105 4e-22 UniRef50_P39663 Alkaline phosphatase synthesis transcriptional r... 105 4e-22 UniRef50_A7GKH0 Two component transcriptional regulator, winged ... 105 4e-22 UniRef50_A0PXH1 Transcriptional regulatory protein n=11 Tax=Clos... 105 5e-22 UniRef50_B8I014 Two component transcriptional regulator, winged ... 105 6e-22 UniRef50_O07130 Sensory transduction protein regX3 n=97 Tax=Acti... 105 6e-22 UniRef50_C6XZP6 Response regulator receiver n=3 Tax=Sphingobacte... 104 6e-22 UniRef50_B8FSL6 Two component transcriptional regulator, winged ... 104 7e-22 UniRef50_Q67MV1 Two-component response regulator n=7 Tax=Clostri... 104 8e-22 UniRef50_C1XV31 Response regulator with CheY-like receiver domai... 104 9e-22 UniRef50_Q2S3D0 Alkaline phosphatase synthesis transcriptional r... 104 9e-22 UniRef50_D2BG66 DNA-binding response regulator, two-component sy... 104 1e-21 UniRef50_Q9F868 Sensory transduction protein regX3 n=47 Tax=Bact... 104 1e-21 UniRef50_C8W6G9 Putative two component transcriptional regulator... 103 1e-21 UniRef50_C4L703 Two component transcriptional regulator, winged ... 103 1e-21 UniRef50_C0Z8X3 Two-component response regulator n=3 Tax=Firmicu... 103 2e-21 UniRef50_C6LDL3 DNA-binding response regulator YycF n=2 Tax=Firm... 102 3e-21 UniRef50_B1HYB3 DNA-binding response regulator n=2 Tax=Bacillace... 102 3e-21 UniRef50_A5UYZ0 Two component transcriptional regulator, winged ... 102 3e-21 UniRef50_Q04N97 Response regulator n=6 Tax=Leptospira RepID=Q04N... 102 3e-21 UniRef50_C4L1R5 Two component transcriptional regulator, winged ... 102 3e-21 UniRef50_Q892Y1 Alkaline phosphatase synthesis transcriptional r... 102 3e-21 UniRef50_C6VLR9 Response regulator n=52 Tax=Firmicutes RepID=C6V... 102 3e-21 UniRef50_P94413 Uncharacterized transcriptional regulatory prote... 102 3e-21 UniRef50_C4W819 Two component transcriptional regulator, winged ... 102 4e-21 UniRef50_P72948 OmpR subfamily n=21 Tax=Bacteria RepID=P72948_SYNY3 102 4e-21 UniRef50_Q03GZ5 DNA-binding response regulator, OmpR family (Rec... 102 4e-21 UniRef50_A7ZAG8 MrsR2 n=2 Tax=Bacillus RepID=A7ZAG8_BACA2 102 4e-21 UniRef50_Q38WB3 Two component system, response regulator n=58 Ta... 102 4e-21 UniRef50_A3I5H1 DNA-binding response regulator n=2 Tax=Bacillace... 102 4e-21 UniRef50_B5Y819 DNA-binding response regulator YycF n=1 Tax=Copr... 102 4e-21 UniRef50_B0TE19 Transcriptional regulator, putative n=1 Tax=Heli... 102 4e-21 UniRef50_Q21EC1 Two component transcriptional regulator, winged ... 102 5e-21 UniRef50_A5UPS1 Two component transcriptional regulator, winged ... 102 5e-21 UniRef50_B8FYB6 Two component transcriptional regulator, winged ... 102 5e-21 UniRef50_A8ZYB8 Two component transcriptional regulator, winged ... 102 5e-21 UniRef50_Q63F03 Response regulator n=15 Tax=Firmicutes RepID=Q63... 102 5e-21 UniRef50_B8I272 Two component transcriptional regulator, winged ... 101 6e-21 UniRef50_D2LZ20 Two component transcriptional regulator, winged ... 101 6e-21 UniRef50_C4IFN3 Transcriptional regulator n=15 Tax=Bacteria RepI... 101 6e-21 UniRef50_C8WP93 Two component transcriptional regulator, winged ... 101 6e-21 UniRef50_B1C9A4 Putative uncharacterized protein n=1 Tax=Anaerof... 101 6e-21 UniRef50_UPI000050FEDE response regulator receiver protein n=1 T... 101 8e-21 UniRef50_A1HRL8 Two component transcriptional regulator, winged ... 101 8e-21 UniRef50_B7CCF4 Putative uncharacterized protein n=3 Tax=Firmicu... 101 9e-21 UniRef50_Q1AZL3 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_A1SKV6 Response regulator receiver n=7 Tax=Bacteria Rep... 100 1e-20 UniRef50_A1Z6C8 Response regulator receiver n=1 Tax=Sulfobacillu... 100 1e-20 UniRef50_C7G9Y4 DNA-binding response regulator n=6 Tax=Bacteria ... 100 1e-20 UniRef50_C0D8Y6 Putative uncharacterized protein n=3 Tax=Clostri... 100 1e-20 UniRef50_A9AYM0 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_A0KCT7 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_B5YEK3 Response regulator DrrA n=5 Tax=Bacteria RepID=B... 100 1e-20 UniRef50_A7Z5A0 YvrH n=28 Tax=Firmicutes RepID=A7Z5A0_BACA2 100 1e-20 UniRef50_D0AFB3 Putative uncharacterized protein n=4 Tax=Firmicu... 100 1e-20 UniRef50_C6PZ92 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_B2A1Z8 Two component transcriptional regulator, winged ... 100 1e-20 UniRef50_A9CWP6 Putative response regulator n=1 Tax=Shewanella b... 100 2e-20 UniRef50_B3QW38 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_A7B4Z9 Putative uncharacterized protein n=2 Tax=Ruminoc... 100 2e-20 UniRef50_C9YME3 Two-component response regulator n=32 Tax=Firmic... 100 2e-20 UniRef50_C2E0K8 Response regulator PhoP n=9 Tax=Lactobacillus Re... 100 2e-20 UniRef50_B4U3Y8 Alkaline phosphatase synthesis transcriptional r... 100 2e-20 UniRef50_D1C683 Two component transcriptional regulator, winged ... 100 2e-20 UniRef50_UPI00017F4CF5 two-component response regulator n=2 Tax=... 100 2e-20 UniRef50_C4Z0U9 Two-component system, OmpR family, phosphate reg... 100 2e-20 UniRef50_B4WRK5 Response regulator receiver domain protein n=1 T... 100 2e-20 UniRef50_C6CSH8 Two component transcriptional regulator, winged ... 100 3e-20 UniRef50_P42244 Uncharacterized transcriptional regulatory prote... 99 3e-20 UniRef50_D2RD26 Transcriptional regulatory protein, C-terminal d... 99 3e-20 UniRef50_A4X1M5 Two component transcriptional regulator, winged ... 99 3e-20 UniRef50_A5UT44 Two component transcriptional regulator, winged ... 99 4e-20 UniRef50_Q0HYY3 Two component transcriptional regulator, winged ... 99 4e-20 UniRef50_Q488W3 DNA-binding response regulator n=3 Tax=Alteromon... 99 4e-20 UniRef50_C3ALG3 Two-component response regulator n=5 Tax=Bacilla... 99 4e-20 UniRef50_D0MGG0 Two component transcriptional regulator, winged ... 99 4e-20 UniRef50_C6CSM8 Two component transcriptional regulator, winged ... 99 4e-20 UniRef50_C6IXU0 Transcriptional regulator domain-containing prot... 99 5e-20 UniRef50_Q3Z7C3 Transcriptional regulator, putative n=1 Tax=Deha... 99 5e-20 UniRef50_C9KN64 DNA-binding response regulator VicR n=2 Tax=Mits... 99 5e-20 UniRef50_Q7NGM9 Two-component response regulator n=1 Tax=Gloeoba... 99 5e-20 UniRef50_Q97MA9 Response regulator (CheY domain, HTH domain) n=1... 99 6e-20 UniRef50_UPI0001692EE0 response regulator n=1 Tax=Paenibacillus ... 98 6e-20 UniRef50_A9KR75 Two component transcriptional regulator, winged ... 98 6e-20 UniRef50_A0LVZ4 Two component transcriptional regulator, winged ... 98 6e-20 UniRef50_Q67RH7 Two-component response regulator n=1 Tax=Symbiob... 98 6e-20 UniRef50_A9AWM9 Two component transcriptional regulator, winged ... 98 7e-20 UniRef50_C0QG14 Response regulator, CheY-like receiver domain pr... 98 7e-20 UniRef50_C6LD48 DNA-binding response regulator ResD n=1 Tax=Brya... 98 7e-20 UniRef50_B4WME0 Response regulator receiver domain protein n=1 T... 98 7e-20 UniRef50_Q5WGW1 Two-component response regulator n=1 Tax=Bacillu... 98 7e-20 UniRef50_Q1AYG8 Two component transcriptional regulator, winged ... 98 8e-20 UniRef50_C6CZ95 Two component transcriptional regulator, winged ... 98 8e-20 UniRef50_A0Y0H8 DNA-binding response regulator n=1 Tax=Alteromon... 98 8e-20 UniRef50_C5CFK4 Two component transcriptional regulator, winged ... 98 9e-20 UniRef50_B1JFX2 Two component transcriptional regulator, winged ... 98 9e-20 UniRef50_Q5WBT6 Two-component response regulator n=3 Tax=Bacilla... 98 1e-19 UniRef50_D1CH01 Two component transcriptional regulator, winged ... 98 1e-19 UniRef50_P45606 Phosphate regulon transcriptional regulatory pro... 98 1e-19 UniRef50_C8WVL8 Two component transcriptional regulator, winged ... 98 1e-19 UniRef50_B0MRC9 Putative uncharacterized protein n=1 Tax=Eubacte... 97 1e-19 UniRef50_B2A0K7 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_D0WFD8 DNA-binding response regulator VicR n=1 Tax=Slac... 97 1e-19 UniRef50_A8VSS8 Response regulator receiver protein n=1 Tax=Baci... 97 1e-19 UniRef50_A9BR19 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_A9AXY0 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_D1YA87 Transcriptional regulatory protein, C-terminal d... 97 1e-19 UniRef50_B0MNE2 Putative uncharacterized protein n=3 Tax=Firmicu... 97 1e-19 UniRef50_B8G223 Two component transcriptional regulator, winged ... 97 1e-19 UniRef50_C7N7D7 Response regulator with CheY-like receiver domai... 97 1e-19 UniRef50_Q2JED0 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_C8PCG6 DNA-binding response regulator n=1 Tax=Lactobaci... 97 2e-19 UniRef50_A8MLN3 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_A8MFP9 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_Q01RV3 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_C5D1A0 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_C7M2G6 Putative two component transcriptional regulator... 97 2e-19 UniRef50_A6LVN5 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_C6PCZ0 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_UPI0001C425A1 two component transcriptional regulator, ... 97 2e-19 UniRef50_D1CA41 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_A9VV65 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_A1SN97 Response regulator receiver n=41 Tax=Bacteria Re... 97 2e-19 UniRef50_Q01T10 Two component transcriptional regulator, winged ... 97 2e-19 UniRef50_Q67J79 Two-component response regulator, CheY-like n=1 ... 97 2e-19 UniRef50_C2W6L0 Two-component response regulator n=5 Tax=Firmicu... 97 2e-19 UniRef50_B2V3E9 Transcriptional regulatory protein ResD n=5 Tax=... 96 2e-19 UniRef50_A6LQJ3 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_Q0AWC5 Response regulator receiver protein n=1 Tax=Synt... 96 3e-19 UniRef50_B6FPY5 Putative uncharacterized protein (Fragment) n=1 ... 96 3e-19 UniRef50_A6X2C4 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_B5JD22 Response regulator receiver domain protein n=1 T... 96 3e-19 UniRef50_C0GHG5 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_UPI0001C421AD two-component response regulator n=1 Tax=... 96 3e-19 UniRef50_A5V0J0 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_Q897D5 Two-component response regulator n=8 Tax=Clostri... 96 3e-19 UniRef50_C0W5Y5 Response regulator n=1 Tax=Actinomyces urogenita... 96 3e-19 UniRef50_Q067N9 Two component transcriptional regulator, winged ... 96 3e-19 UniRef50_UPI00017890B9 putative two component transcriptional re... 96 4e-19 UniRef50_B1XM84 Two-component response regulator n=8 Tax=Cyanoba... 96 4e-19 UniRef50_C7ILM1 Two component transcriptional regulator, winged ... 96 4e-19 UniRef50_B0S1J7 Two-component response regulator n=16 Tax=Clostr... 96 4e-19 UniRef50_Q02A31 Two component transcriptional regulator, winged ... 96 4e-19 UniRef50_C2EBW1 Two-component response regulator n=1 Tax=Lactoba... 96 5e-19 UniRef50_A9KHT5 Two component transcriptional regulator, winged ... 96 5e-19 UniRef50_C4G2P7 Putative uncharacterized protein n=1 Tax=Abiotro... 96 5e-19 UniRef50_C6D5Y8 Putative two component transcriptional regulator... 96 5e-19 UniRef50_C7N0N0 Response regulator with CheY-like receiver domai... 96 5e-19 UniRef50_C7MNN6 Response regulator with CheY-like receiver domai... 95 5e-19 UniRef50_A9BP99 Two component transcriptional regulator, winged ... 95 5e-19 UniRef50_C7N7W6 Response regulator with CheY-like receiver domai... 95 6e-19 UniRef50_B0TDB2 Two-component response regulator n=3 Tax=Bacteri... 95 6e-19 UniRef50_A7WWQ5 Transcriptional regulatory protein walR n=685 Ta... 95 6e-19 UniRef50_Q0RNB1 Putative response regulator (Response regulator ... 95 6e-19 UniRef50_C8WK97 Two component transcriptional regulator, winged ... 95 7e-19 UniRef50_B0N9X7 Putative uncharacterized protein n=2 Tax=Clostri... 95 7e-19 UniRef50_A8SR47 Putative uncharacterized protein n=2 Tax=Clostri... 95 7e-19 UniRef50_A6LXP4 Two component transcriptional regulator, winged ... 95 7e-19 UniRef50_A7HL55 Two component transcriptional regulator, winged ... 95 7e-19 UniRef50_B1YFK7 Two component transcriptional regulator, winged ... 95 7e-19 UniRef50_C1YUF6 Response regulator with CheY-like receiver domai... 95 8e-19 UniRef50_Q1J3D6 Two component transcriptional regulator, winged ... 95 8e-19 UniRef50_Q3Z7F8 Transcriptional regulator n=5 Tax=Dehalococcoide... 95 8e-19 UniRef50_Q1J251 Two component transcriptional regulator PhoB n=5... 95 8e-19 UniRef50_Q12T20 Two component transcriptional regulator, winged ... 95 8e-19 UniRef50_B9YDA4 Putative uncharacterized protein n=1 Tax=Holdema... 95 8e-19 UniRef50_C5D2L7 Two component transcriptional regulator, winged ... 95 8e-19 UniRef50_Q026B5 Two component heavy metal response transcription... 94 9e-19 UniRef50_Q3DDJ6 Phosphate regulon response regulator PhoB n=11 T... 94 9e-19 UniRef50_A6BHI5 Putative uncharacterized protein n=1 Tax=Dorea l... 94 9e-19 UniRef50_Q3A924 DNA-binding response regulator n=3 Tax=Bacteria ... 94 9e-19 UniRef50_B6FYV2 Putative uncharacterized protein n=1 Tax=Clostri... 94 9e-19 UniRef50_Q24Q12 Putative uncharacterized protein n=1 Tax=Desulfi... 94 9e-19 UniRef50_D1PMF3 DNA-binding response regulator RegX3 n=3 Tax=Clo... 94 9e-19 UniRef50_Q5SMC3 Response regulator n=4 Tax=Deinococci RepID=Q5SM... 94 9e-19 UniRef50_C6D6P8 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_D1C280 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_Q38YC7 Two-component system, response regulator (Possib... 94 1e-18 UniRef50_C9XR57 Two-component response regulator n=11 Tax=Clostr... 94 1e-18 UniRef50_C0D765 Putative uncharacterized protein n=1 Tax=Clostri... 94 1e-18 UniRef50_Q2SPE2 Response regulator consisting of a CheY-like rec... 94 1e-18 UniRef50_C7I0W4 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_Q3AEH2 DNA-binding response regulator n=1 Tax=Carboxydo... 94 1e-18 UniRef50_B1YJZ1 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_C2EDI8 Response regulator n=11 Tax=Firmicutes RepID=C2E... 94 1e-18 UniRef50_B8HQE6 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_Q1K367 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_B1ZTF2 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_C0CI50 Putative uncharacterized protein n=1 Tax=Blautia... 94 1e-18 UniRef50_D1C5Q5 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_C7TA80 Two-component response regulator n=2 Tax=Lactoba... 94 1e-18 UniRef50_B0NH75 Putative uncharacterized protein n=1 Tax=Clostri... 94 1e-18 UniRef50_C6C1C7 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_C4IAX3 DNA-binding response regulator n=1 Tax=Clostridi... 94 1e-18 UniRef50_B3DZZ9 DNA-binding response regulator, OmpR family (REC... 94 1e-18 UniRef50_Q04AR8 DNA-binding response regulator, OmpR family (Rec... 94 1e-18 UniRef50_Q5HR28 Response regulator saeR n=60 Tax=Staphylococcus ... 94 1e-18 UniRef50_UPI0001C379A1 regulatory protein VanR n=1 Tax=Ruminococ... 94 1e-18 UniRef50_A7HMZ4 Two component transcriptional regulator, winged ... 94 1e-18 UniRef50_C7N5H9 Response regulator with CheY-like receiver domai... 94 1e-18 UniRef50_D0WJB9 Transcriptional regulator n=1 Tax=Slackia exigua... 94 2e-18 UniRef50_C7T954 Two-component response regulator n=10 Tax=Lactob... 94 2e-18 UniRef50_C7H5J1 Two-component system response regulator (Fragmen... 94 2e-18 UniRef50_A7ICZ4 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_A5IKU4 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_C7NAQ8 Two component transcriptional regulator, winged ... 93 2e-18 UniRef50_C7NFF7 Response regulator with CheY-like receiver domai... 93 2e-18 UniRef50_B2G959 Two-component response regulator n=13 Tax=Lactob... 93 2e-18 UniRef50_A4IPQ9 DNA-binding response regulator n=16 Tax=Bacillal... 93 2e-18 UniRef50_D1BPS5 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_A5WBW4 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_Q2S514 Response regulator DrrA n=3 Tax=Rhodothermaceae ... 93 3e-18 UniRef50_C8WRL2 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_D1BL25 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_B1YK44 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_A6TM13 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_B5I213 Regulatory protein n=3 Tax=Streptomyces RepID=B5... 93 3e-18 UniRef50_A7GIT8 DNA-binding response regulator n=11 Tax=Clostrid... 93 3e-18 UniRef50_C1D266 Putative response regulator, OmpR n=1 Tax=Deinoc... 93 3e-18 UniRef50_C4L0X3 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_A4XGM2 Two component transcriptional regulator, winged ... 93 3e-18 UniRef50_B2GF54 Two-component response regulator n=14 Tax=Lactob... 92 3e-18 UniRef50_B8G869 Two component transcriptional regulator, winged ... 92 3e-18 UniRef50_B9XEM3 Two component transcriptional regulator, winged ... 92 3e-18 UniRef50_A9WLJ1 Two-component response regulator n=4 Tax=Actinom... 92 4e-18 UniRef50_A4AL32 Putative two-component system response regulator... 92 4e-18 UniRef50_A5N471 VanR n=21 Tax=Bacteria RepID=A5N471_CLOK5 92 4e-18 UniRef50_C9LC31 Regulatory protein VanR n=1 Tax=Blautia hansenii... 92 4e-18 UniRef50_C6QDD0 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_C6J6L0 Response regulator n=2 Tax=Bacillales RepID=C6J6... 92 4e-18 UniRef50_UPI000196AEE3 hypothetical protein CATMIT_00609 n=1 Tax... 92 4e-18 UniRef50_C2H8S4 Response regulator n=8 Tax=Enterococcus RepID=C2... 92 4e-18 UniRef50_C7N1J8 Response regulator with CheY-like receiver domai... 92 4e-18 UniRef50_Q21DY6 Phosphate regulon transcriptional regulatory pro... 92 4e-18 UniRef50_B8CXQ9 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_B7K7W8 Multi-component transcriptional regulator, winge... 92 4e-18 UniRef50_A6LXL2 Two component transcriptional regulator, winged ... 92 4e-18 UniRef50_Q2RUW2 Two component transcriptional regulator, winged ... 92 5e-18 UniRef50_D1CG76 Two component transcriptional regulator, winged ... 92 5e-18 UniRef50_C9XSY6 Two-component response regulator n=15 Tax=Firmic... 92 5e-18 UniRef50_Q894P5 Transcriptional regulatory protein n=4 Tax=Clost... 92 5e-18 UniRef50_D0LUI4 Putative two component transcriptional regulator... 92 5e-18 UniRef50_Q5WKN6 Two-component response regulator n=2 Tax=Firmicu... 92 5e-18 UniRef50_B2TJU3 Regulatory protein VanR n=9 Tax=Firmicutes RepID... 92 5e-18 UniRef50_A7GA24 DNA-binding response regulator n=10 Tax=Clostrid... 92 5e-18 UniRef50_A8SVV6 Putative uncharacterized protein n=1 Tax=Coproco... 92 5e-18 UniRef50_C0WUJ3 Response regulator n=3 Tax=Lactobacillus RepID=C... 92 5e-18 UniRef50_B2TJI4 Regulatory protein VanR n=4 Tax=Clostridiales Re... 92 5e-18 UniRef50_C7N192 Response regulator with CheY-like receiver domai... 92 5e-18 UniRef50_B1WRX4 Two component transcriptional regulator n=11 Tax... 92 5e-18 UniRef50_Q49ZT8 Heme response regulator hssR n=7 Tax=Staphylococ... 92 5e-18 UniRef50_B7K5A2 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_A5ZNL8 Putative uncharacterized protein n=3 Tax=Ruminoc... 92 6e-18 UniRef50_B2TJG9 Regulatory protein VanR n=6 Tax=Firmicutes RepID... 92 6e-18 UniRef50_B3E8G4 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_A9AVR8 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_B9XFI9 Two component transcriptional regulator, winged ... 92 6e-18 UniRef50_Q2S085 Response regulator DrrA n=1 Tax=Salinibacter rub... 92 6e-18 UniRef50_Q2FY79 Transcriptional regulatory protein srrA n=168 Ta... 92 6e-18 UniRef50_A4J2J4 Two component transcriptional regulator, winged ... 92 7e-18 UniRef50_A9G6M8 Two-component response regulator n=1 Tax=Sorangi... 92 7e-18 UniRef50_Q01YI3 Two component transcriptional regulator, winged ... 92 7e-18 UniRef50_Q1DCL7 DNA-binding response regulator n=6 Tax=Cystobact... 92 7e-18 UniRef50_A6LXW1 Two component transcriptional regulator, winged ... 92 7e-18 UniRef50_B0TCF4 Two-component response regulator resd n=4 Tax=Fi... 92 7e-18 UniRef50_A4FEZ3 Two-component response regulator n=4 Tax=Bacteri... 92 7e-18 UniRef50_Q5KTV1 Putative uncharacterized protein n=1 Tax=Staphyl... 91 8e-18 UniRef50_C5D3X1 Two component transcriptional regulator, winged ... 91 8e-18 UniRef50_C0X3L2 Response regulator n=22 Tax=Enterococcus faecali... 91 8e-18 UniRef50_B9CPY7 DNA-binding response regulator n=3 Tax=Staphyloc... 91 8e-18 UniRef50_B3WB53 Response regulator n=35 Tax=Bacilli RepID=B3WB53... 91 8e-18 UniRef50_C6IVK1 Response regulator (Fragment) n=1 Tax=Paenibacil... 91 8e-18 UniRef50_Q8VTU3 Putative response regulator RR23 n=1 Tax=Listeri... 91 8e-18 UniRef50_B1YEH2 Two component transcriptional regulator, winged ... 91 8e-18 UniRef50_B1ZQC8 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_D0MGI0 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_Q2JPV2 DNA-binding response regulator n=17 Tax=Bacteria... 91 9e-18 UniRef50_C4L340 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_Q2SNE0 Response regulator consisting of a CheY-like rec... 91 9e-18 UniRef50_A6LZK7 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_D2LY16 Two component transcriptional regulator, winged ... 91 9e-18 UniRef50_Q4ZQ24 Response regulator receiver:Transcriptional regu... 91 1e-17 UniRef50_Q182M4 Two-component response regulator n=14 Tax=Clostr... 91 1e-17 UniRef50_UPI0001AEBD7C two component transcriptional regulator n... 91 1e-17 UniRef50_Q02BS1 Response regulator receiver protein n=1 Tax=Cand... 91 1e-17 UniRef50_C6LJU9 Two-component response regulator for energy tran... 91 1e-17 UniRef50_A5CZK5 Response regulator n=3 Tax=Clostridiales RepID=A... 91 1e-17 UniRef50_Q4ZUU7 Response regulator receiver:Transcriptional regu... 91 1e-17 UniRef50_B8FS97 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_C0C3P9 Putative uncharacterized protein n=1 Tax=Clostri... 91 1e-17 UniRef50_B1WXJ7 Two-component response regulator n=2 Tax=Chrooco... 91 1e-17 UniRef50_B1KWY3 DNA-binding response regulator n=33 Tax=Firmicut... 91 1e-17 UniRef50_C0WM98 Possible response regulator n=3 Tax=Lactobacillu... 91 1e-17 UniRef50_A7X5Y5 Heme response regulator hssR n=71 Tax=Bacillales... 91 1e-17 UniRef50_UPI000050FA0F putative two-component system response re... 91 1e-17 UniRef50_Q186H9 Two-component response regulator n=28 Tax=Bacter... 91 1e-17 UniRef50_B8IVD0 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_C1XS75 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_Q2T1W7 DNA-binding response regulator n=22 Tax=Proteoba... 91 1e-17 UniRef50_Q2SL72 Response regulator consisting of a CheY-like rec... 91 1e-17 UniRef50_C7LSY9 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_B4U9Z2 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_B2A8D5 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_A6NWH9 Putative uncharacterized protein n=2 Tax=Bactero... 91 1e-17 UniRef50_UPI0001C31E43 two component transcriptional regulator, ... 91 1e-17 UniRef50_P0AA18 Transcriptional regulatory protein ompR n=242 Ta... 91 1e-17 UniRef50_Q0IC97 DNA-binding response regulator n=3 Tax=Synechoco... 91 1e-17 UniRef50_A6TKQ5 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_C6MYB5 DNA-binding response regulator n=2 Tax=Legionell... 91 1e-17 UniRef50_B6WUI4 Putative uncharacterized protein n=1 Tax=Desulfo... 91 1e-17 UniRef50_C6D0P6 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_B1XXD9 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_A5WB94 Two component transcriptional regulator, winged ... 91 1e-17 UniRef50_Q2BM87 DNA-binding response regulator n=1 Tax=Neptuniib... 91 1e-17 UniRef50_B1IEF4 Regulatory protein VanR n=17 Tax=Firmicutes RepI... 91 1e-17 UniRef50_A0LPJ2 Two component transcriptional regulator, winged ... 91 2e-17 UniRef50_C0D2V9 Putative uncharacterized protein n=1 Tax=Clostri... 91 2e-17 UniRef50_D0WLW8 DNA-binding response regulator RegX3 n=1 Tax=Act... 91 2e-17 UniRef50_C9ZHF5 Putative regulatory protein n=6 Tax=Streptomyces... 91 2e-17 UniRef50_C3RMH7 Signal transduction regulator n=8 Tax=Bacteria R... 91 2e-17 UniRef50_C6VZ09 Two component transcriptional regulator, winged ... 91 2e-17 UniRef50_A0PYF5 Two-component response regulator n=8 Tax=Firmicu... 90 2e-17 UniRef50_A1SYE4 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_A0LU58 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_C0WE14 Two-component system transcriptional regulator n... 90 2e-17 UniRef50_D1VIP6 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_Q04VZ3 Response regulator n=6 Tax=Leptospira RepID=Q04V... 90 2e-17 UniRef50_A8DJW5 Transcriptional regulatory protein n=1 Tax=Candi... 90 2e-17 UniRef50_B0CFF1 Two-component transcriptional regulator n=7 Tax=... 90 2e-17 UniRef50_A1B7Z0 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_B1C9W9 Putative uncharacterized protein n=1 Tax=Anaerof... 90 2e-17 UniRef50_D2SFJ3 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_B8G179 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_C4Z7A3 Two-component system, OmpR family, response regu... 90 2e-17 UniRef50_A9BP07 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_C7H3Q1 KDP operon transcriptional regulatory protein Kd... 90 2e-17 UniRef50_Q2JAC4 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_C9KL69 DNA-binding response regulator ArlR n=1 Tax=Mits... 90 2e-17 UniRef50_A8ZSJ7 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_Q0SQL4 Two-component response regulator n=10 Tax=Firmic... 90 2e-17 UniRef50_B8H4H9 Two-component response regulator protein n=9 Tax... 90 2e-17 UniRef50_A9VUJ1 Two component transcriptional regulator, winged ... 90 2e-17 UniRef50_A6G9H9 Two-component response regulator n=1 Tax=Plesioc... 90 2e-17 UniRef50_UPI0001B559F0 two-component system, response regulator ... 90 3e-17 UniRef50_B0C620 Two component transcriptional regulator, winged ... 90 3e-17 UniRef50_A9KM61 Two component transcriptional regulator, winged ... 90 3e-17 UniRef50_Q8ESP1 Two-component response regulator n=1 Tax=Oceanob... 90 3e-17 UniRef50_C1I3L5 Alkaline phosphatase synthesis transcriptional r... 90 3e-17 UniRef50_C8X3Y5 Two component transcriptional regulator, winged ... 90 3e-17 UniRef50_A4CEI9 Transcriptional regulatory protein RstA n=3 Tax=... 89 3e-17 UniRef50_A6LVA4 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_C8QI30 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_Q0ASG1 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_C6LEL9 DNA-binding response regulator RegX3 n=3 Tax=Clo... 89 3e-17 UniRef50_UPI0001C42B3F two component transcriptional regulator, ... 89 3e-17 UniRef50_C7IFX1 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_Q3K1Z3 DNA-binding response regulator n=9 Tax=Bacteria ... 89 3e-17 UniRef50_A6TL65 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_B2JBG7 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_A1U3N6 Two component transcriptional regulator, winged ... 89 3e-17 UniRef50_C7I0A5 Two component transcriptional regulator PhoB, wi... 89 3e-17 UniRef50_C1SP47 Response regulator with CheY-like receiver domai... 89 3e-17 UniRef50_A9G298 Two-component response regulator n=1 Tax=Sorangi... 89 4e-17 UniRef50_B9E984 Putative uncharacterized protein n=1 Tax=Macroco... 89 4e-17 UniRef50_C9RLA0 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_C1ZG07 Response regulator with CheY-like receiver domai... 89 4e-17 UniRef50_B6FSP5 Putative uncharacterized protein n=1 Tax=Clostri... 89 4e-17 UniRef50_P54443 Uncharacterized transcriptional regulatory prote... 89 4e-17 UniRef50_A4SZ97 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_Q26IA7 Transcriptional regulatory protein n=3 Tax=Bacte... 89 4e-17 UniRef50_B0G6A2 Putative uncharacterized protein n=2 Tax=Lachnos... 89 4e-17 UniRef50_Q2N765 DNA-binding response regulator n=8 Tax=Proteobac... 89 4e-17 UniRef50_A9AYH1 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_A6M0T3 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_A0RCN7 Two-component response regulator n=65 Tax=Bacill... 89 4e-17 UniRef50_C2V3X6 Two component transcriptional regulator, winged ... 89 4e-17 UniRef50_UPI0001C36ECD response regulator n=1 Tax=Ruminococcus f... 89 4e-17 UniRef50_B1Y714 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_O78428 Probable transcriptional regulator ycf27 n=18 Ta... 89 5e-17 UniRef50_D1U371 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_C9XMT9 Two-component response regulator n=94 Tax=Bacter... 89 5e-17 UniRef50_Q2IGB7 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_C7NK44 Response regulator with CheY-like receiver domai... 89 5e-17 UniRef50_B8G7R1 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_O34903 Uncharacterized transcriptional regulatory prote... 89 5e-17 UniRef50_B7ILX3 DNA-binding response regulator n=102 Tax=Firmicu... 89 5e-17 UniRef50_A0YP32 Two-component response regulator n=1 Tax=Lyngbya... 89 5e-17 UniRef50_A5UWJ8 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_B7CCX3 Putative uncharacterized protein n=1 Tax=Eubacte... 89 5e-17 UniRef50_D1CC84 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_A5UQY1 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_B6BN62 Two-component system response regulator n=1 Tax=... 89 5e-17 UniRef50_A7K1J9 DNA-binding response regulator n=13 Tax=Vibriona... 89 5e-17 UniRef50_C7H8D4 Two-component response regulator n=12 Tax=Bacter... 89 5e-17 UniRef50_B8JG70 Two component transcriptional regulator, winged ... 89 5e-17 UniRef50_A0RK71 DNA-binding response regulator n=69 Tax=Bacillus... 89 5e-17 UniRef50_A3CKZ7 Two-component response transcriptional regulator... 89 5e-17 UniRef50_C3RJ29 Response regulator gtcR n=2 Tax=Bacteria RepID=C... 89 6e-17 UniRef50_Q07HV3 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_B7JEB2 Alkaline phosphatase synthesis transcriptional r... 89 6e-17 UniRef50_A5N716 Transcriptional regulator n=15 Tax=Firmicutes Re... 89 6e-17 UniRef50_D2M1X4 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_A5VEY8 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_Q03AM3 DNA-binding response regulator, OmpR family (Rec... 89 6e-17 UniRef50_C2D6V6 Possible response regulator n=1 Tax=Atopobium va... 89 6e-17 UniRef50_B8I717 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_C8WRL6 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_A4EGJ5 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_Q3A7S2 Putative two component response regulator n=1 Ta... 89 6e-17 UniRef50_C4KB06 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_B8FQL7 Two component transcriptional regulator, winged ... 89 6e-17 UniRef50_A8GAJ9 Two component transcriptional regulator, winged ... 88 6e-17 UniRef50_Q189I8 Two-component response regulator n=5 Tax=Clostri... 88 7e-17 UniRef50_B8DZ94 Two component transcriptional regulator, winged ... 88 7e-17 UniRef50_A6L7N3 Two-component system response regulator n=9 Tax=... 88 7e-17 UniRef50_C6JBE6 Putative uncharacterized protein n=1 Tax=Ruminoc... 88 7e-17 UniRef50_A5G0J5 Two component transcriptional regulator, winged ... 88 7e-17 UniRef50_C4Z2E0 Two-component system, OmpR family, phosphate reg... 88 7e-17 UniRef50_B4WSE4 Response regulator receiver domain protein n=1 T... 88 7e-17 UniRef50_Q4HSL5 Phosphate regulon response regulator PhoB n=3 Ta... 88 7e-17 UniRef50_Q2SHD7 Probable transcriptional regulator n=1 Tax=Hahel... 88 7e-17 UniRef50_C0BXI5 Putative uncharacterized protein n=2 Tax=Clostri... 88 7e-17 UniRef50_Q3KAS5 Two-component system, response regulator n=2 Tax... 88 7e-17 UniRef50_C7H3P4 DNA-binding response regulator SrrA n=1 Tax=Faec... 88 7e-17 UniRef50_A4FNN5 Response regulator, two-component system n=12 Ta... 88 7e-17 UniRef50_B8FLX7 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_A6TT79 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_Q52990 Phosphate regulon transcriptional regulatory pro... 88 8e-17 UniRef50_C7LY45 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_A7GEN9 DNA-binding response regulator n=18 Tax=Firmicut... 88 8e-17 UniRef50_Q030C5 DNA-binding response regulator, OmpR family (Rec... 88 8e-17 UniRef50_Q1GXN5 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_Q1NA75 DNA-binding response regulator n=3 Tax=Alphaprot... 88 8e-17 UniRef50_C6NV64 Two component transcriptional regulator, winged ... 88 8e-17 UniRef50_B4WSX3 Response regulator receiver domain protein n=1 T... 88 8e-17 UniRef50_C4LLE8 Two-component system, response regulator n=19 Ta... 88 8e-17 UniRef50_C5ENX8 Two-component response regulator n=2 Tax=Clostri... 88 8e-17 UniRef50_C0ZDC3 Two-component response regulator n=1 Tax=Breviba... 88 9e-17 UniRef50_B0TXI9 Response regulator receiver protein n=14 Tax=Fra... 88 9e-17 UniRef50_B1QW07 Regulatory protein VanR n=6 Tax=Clostridiales Re... 88 9e-17 UniRef50_D0WIB8 DNA-binding response regulator VicR n=1 Tax=Slac... 88 9e-17 UniRef50_C6CWW2 Two component transcriptional regulator, winged ... 88 9e-17 UniRef50_A5N8U3 Transcriptional regulator n=3 Tax=Clostridium Re... 88 9e-17 UniRef50_Q6F7B5 Two-component response regulator n=55 Tax=Bacter... 88 9e-17 UniRef50_P45189 Phosphate regulon transcriptional regulatory pro... 88 9e-17 UniRef50_B8DS40 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_A6WIX6 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_B8HEE3 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_B2V706 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_C7LNV6 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_B8HDW6 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_UPI0001C35F78 two-component response regulator n=1 Tax=... 88 1e-16 UniRef50_A6CG62 Two-component response regulator n=1 Tax=Plancto... 88 1e-16 UniRef50_P0A5Z5 DNA-binding response regulator mtrA n=76 Tax=Bac... 88 1e-16 UniRef50_Q9KAM3 Two-component response regulator n=1 Tax=Bacillu... 88 1e-16 UniRef50_A9KP45 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_C5VNC3 Alkaline phosphatase synthesis transcriptional r... 88 1e-16 UniRef50_Q3B3K7 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_C9RRV7 Two component transcriptional regulator, winged ... 88 1e-16 UniRef50_UPI0001C37170 two component transcriptional regulator, ... 87 1e-16 UniRef50_B1VZK5 Putative transcriptional regulator n=8 Tax=Strep... 87 1e-16 UniRef50_D2MMT6 Putative regulatory protein VanR n=1 Tax=Bulleid... 87 1e-16 UniRef50_Q01RB2 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_A4E8P8 Putative uncharacterized protein n=3 Tax=Collins... 87 1e-16 UniRef50_C0Z5U8 Two-component response regulator n=3 Tax=Firmicu... 87 1e-16 UniRef50_A9H3V0 Two component Transcriptional regulator n=96 Tax... 87 1e-16 UniRef50_UPI0001C355EA transcriptional regulator n=1 Tax=Clostri... 87 1e-16 UniRef50_D1VK99 Putative two component transcriptional regulator... 87 1e-16 UniRef50_C5CE19 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_C8PDN3 DNA-binding response regulator n=1 Tax=Lactobaci... 87 1e-16 UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein ... 87 1e-16 UniRef50_Q3AVF0 Response regulator receiver domain protein (CheY... 87 1e-16 UniRef50_A9ASF4 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_C9L5Y5 Regulatory protein VanR n=1 Tax=Blautia hansenii... 87 1e-16 UniRef50_Q1AXX7 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_Q0F0D6 Response regulator in two-component regulatory s... 87 1e-16 UniRef50_Q44006 Transcriptional activator protein czcR n=330 Tax... 87 1e-16 UniRef50_B9CKZ5 Transcriptional regulator domain protein n=2 Tax... 87 1e-16 UniRef50_B9L1T3 Phosphate regulatory protein n=1 Tax=Thermomicro... 87 1e-16 UniRef50_UPI00016B25CE two component transcriptional regulator, ... 87 1e-16 UniRef50_Q21BK9 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_C9YCY7 Transcriptional regulatory protein ompR n=1 Tax=... 87 1e-16 UniRef50_P51358 Probable transcriptional regulator ycf27 n=96 Ta... 87 1e-16 UniRef50_A1ULT5 Two component transcriptional regulator, winged ... 87 1e-16 UniRef50_Q251C7 Putative uncharacterized protein n=1 Tax=Desulfi... 87 1e-16 UniRef50_Q06239 Regulatory protein vanR n=26 Tax=Firmicutes RepI... 87 1e-16 UniRef50_B2IIX2 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_P35163 Transcriptional regulatory protein resD n=162 Ta... 87 2e-16 UniRef50_C8WJL3 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_C3WCS3 Two-component system response regulator n=4 Tax=... 87 2e-16 UniRef50_B1ZTF3 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_C4FAP3 Putative uncharacterized protein n=3 Tax=Bacteri... 87 2e-16 UniRef50_Q3MGM2 Sensor protein n=22 Tax=Bacteria RepID=Q3MGM2_ANAVT 87 2e-16 UniRef50_C0BVZ7 Putative uncharacterized protein n=2 Tax=Clostri... 87 2e-16 UniRef50_Q46TX9 Response regulator receiver:Transcriptional regu... 87 2e-16 UniRef50_C9XRL7 Two-component response regulator n=4 Tax=Clostri... 87 2e-16 UniRef50_Q1GLX1 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_A8F5U3 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_B8GBX2 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_A9AXT6 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_B4CW77 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_Q01N64 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_B1VIL1 Two-component system response regulator n=3 Tax=... 87 2e-16 UniRef50_Q1LHM7 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_D2LRZ5 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_C6BIK6 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_Q1CZP3 DNA-binding reponse regulator n=2 Tax=Myxococcal... 87 2e-16 UniRef50_B3DXI2 Phosphate regulon transcriptional regulatory pro... 87 2e-16 UniRef50_A9KGK4 Phosphate regulon transcriptional regulatory pro... 87 2e-16 UniRef50_D2LRZ1 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_B4WP26 Response regulator receiver domain protein n=1 T... 87 2e-16 UniRef50_Q3A190 Two component signal transduction response regul... 87 2e-16 UniRef50_D1XII5 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_UPI0001C318D2 two component transcriptional regulator, ... 87 2e-16 UniRef50_B4U9M6 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_C3X860 Response regulator receiver protein n=2 Tax=Oxal... 87 2e-16 UniRef50_B2V7Q1 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_C7RUD8 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_D1BX45 Two component transcriptional regulator, winged ... 87 2e-16 UniRef50_C0ZH45 Two-component response regulator n=2 Tax=Bacilla... 87 2e-16 UniRef50_C5QMK0 Hemin DNA-binding response regulator n=3 Tax=Bac... 87 2e-16 UniRef50_A6FSM2 Probable two-component response regulator protei... 87 2e-16 UniRef50_P52108 Transcriptional regulatory protein rstA n=163 Ta... 87 2e-16 UniRef50_C6NVH5 Phosphate regulon transcriptional regulatory pro... 87 2e-16 UniRef50_UPI0001C32387 two component transcriptional regulator, ... 86 2e-16 UniRef50_C4ZP42 Two component transcriptional regulator, winged ... 86 2e-16 UniRef50_C6RFL7 Two component transcriptional regulator, winged ... 86 2e-16 UniRef50_C9LLD5 DNA-binding response regulator ResD n=1 Tax=Dial... 86 3e-16 UniRef50_A6W3G3 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_UPI0001B518F4 two-component system response regulator n... 86 3e-16 UniRef50_C7PII2 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_UPI0001C424C1 hypothetical protein BpOF4_12950 n=1 Tax=... 86 3e-16 UniRef50_Q8RBP2 Response regulators consisting of a CheY-like re... 86 3e-16 UniRef50_B1XLL2 Two-component response regulator n=3 Tax=Synecho... 86 3e-16 UniRef50_B0P738 Putative uncharacterized protein n=1 Tax=Anaerot... 86 3e-16 UniRef50_D0KWS3 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_P69229 Transcriptional regulatory protein baeR n=214 Ta... 86 3e-16 UniRef50_B2IER4 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_B4DAQ3 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_B5EQN9 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_A0L7S7 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_D2QGK1 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_C4ZFF8 DNA-binding response regulator n=60 Tax=Bacteria... 86 3e-16 UniRef50_A4CE30 Probable two-component response regulator transc... 86 3e-16 UniRef50_UPI00019732E7 DNA-binding response regulator n=1 Tax=Cl... 86 3e-16 UniRef50_B2TMR2 Transcriptional regulatory protein ResD n=1 Tax=... 86 3e-16 UniRef50_Q1NHM9 DNA-binding response regulator n=1 Tax=Sphingomo... 86 3e-16 UniRef50_A4X7Q0 Response regulator receiver n=46 Tax=Actinomycet... 86 3e-16 UniRef50_A6CDX9 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_C6I3R1 Two-component system response regulator n=20 Tax... 86 3e-16 UniRef50_A3WKN2 Response regulator (CheY,wHTH domains) n=1 Tax=I... 86 3e-16 UniRef50_B0G2J4 Putative uncharacterized protein n=1 Tax=Dorea f... 86 3e-16 UniRef50_D0SP77 Phosphate regulon transcriptional regulatory pro... 86 3e-16 UniRef50_UPI000185BED4 KDP operon transcriptional regulatory pro... 86 3e-16 UniRef50_C7LZ74 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_C6HUL5 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_C6J181 Two-component system response regulator n=1 Tax=... 86 3e-16 UniRef50_B5EH76 Two component transcriptional regulator, winged ... 86 3e-16 UniRef50_C2Z9H3 DNA-binding response regulator n=4 Tax=Bacillace... 86 3e-16 UniRef50_C0Z621 Two-component response regulator n=5 Tax=Firmicu... 86 3e-16 UniRef50_UPI0001C3717E DNA-binding response regulator n=1 Tax=Ru... 86 3e-16 UniRef50_D1VT61 Regulatory protein VanR n=1 Tax=Peptoniphilus la... 86 3e-16 UniRef50_C8PVM6 Putative transcriptional regulator OmpR n=1 Tax=... 86 4e-16 UniRef50_A5F0A5 Transcriptional regulator n=77 Tax=Proteobacteri... 86 4e-16 UniRef50_UPI0001B9ECAC two component transcriptional regulator, ... 86 4e-16 UniRef50_B6IQC2 Cell cycle transcriptional regulator, putative n... 86 4e-16 UniRef50_UPI0000164CF1 response regulator n=1 Tax=Deinococcus ra... 86 4e-16 UniRef50_Q0TNL1 DNA-binding response regulator n=8 Tax=Clostridi... 86 4e-16 UniRef50_A1VI78 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_UPI000196BAD1 hypothetical protein CATMIT_00504 n=1 Tax... 86 4e-16 UniRef50_B1ZVS5 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_B0TF57 Transcriptional regulator, putative n=1 Tax=Heli... 86 4e-16 UniRef50_A5WHF9 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_Q2W608 Response regulator consisting of a CheY-like rec... 86 4e-16 UniRef50_D0MFI7 Putative two component transcriptional regulator... 86 4e-16 UniRef50_D0LLH3 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_C7N3P1 Response regulator with CheY-like receiver domai... 86 4e-16 UniRef50_B8FI17 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_P0A5Z7 Transcriptional regulatory protein prrA n=41 Tax... 86 4e-16 UniRef50_C9RQT3 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_C4L1Q9 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_Q5NY91 Response regulator n=1 Tax=Aromatoleum aromaticu... 86 4e-16 UniRef50_C1SGQ1 Response regulator with CheY-like receiver domai... 86 4e-16 UniRef50_Q07HK8 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_B7QTW7 Two-component response regulator n=1 Tax=Ruegeri... 86 4e-16 UniRef50_Q3ATG7 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_A0L527 Two component transcriptional regulator, winged ... 86 4e-16 UniRef50_C8P1C0 Regulatory protein VanR n=1 Tax=Erysipelothrix r... 86 4e-16 UniRef50_D1A718 Putative two component transcriptional regulator... 86 4e-16 UniRef50_C7N3P4 Response regulator with CheY-like receiver domai... 86 4e-16 UniRef50_A1WWM5 Response regulator receiver protein n=1 Tax=Halo... 86 5e-16 UniRef50_B1ZLF1 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_B1ZS16 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_B6JIF2 DNA-binding response regulator OmpR n=1 Tax=Olig... 86 5e-16 UniRef50_A4G2G5 Phosphate regulon transcriptional regulatory pro... 86 5e-16 UniRef50_Q47744 Regulatory protein vanRB n=13 Tax=Bacteria RepID... 86 5e-16 UniRef50_Q97FK2 Response regulator (CheY-like receiver domain an... 86 5e-16 UniRef50_B7K6Q7 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_C7PP48 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_B7K2S9 Two component transcriptional regulator, winged ... 86 5e-16 UniRef50_C9XSJ2 Two-component response regulator n=15 Tax=Clostr... 86 5e-16 UniRef50_A3ERN0 Putative two component transcriptional regulator... 86 5e-16 UniRef50_A6LA64 Two-component system response regulator n=12 Tax... 86 5e-16 UniRef50_Q39SW2 Two component transcriptional regulator, winged ... 85 5e-16 UniRef50_B2IZ13 Sensor protein n=11 Tax=Cyanobacteria RepID=B2IZ... 85 5e-16 UniRef50_P23620 Phosphate regulon transcriptional regulatory pro... 85 6e-16 UniRef50_Q1IVX4 Two component transcriptional regulator, winged ... 85 6e-16 UniRef50_UPI0001C16F99 Multi-component Transcriptional regulator... 85 6e-16 UniRef50_D0MIF5 Two component transcriptional regulator, winged ... 85 6e-16 UniRef50_A7ZEI3 Transcriptional activator protein CopR n=9 Tax=B... 85 6e-16 UniRef50_B8FS42 Two component transcriptional regulator, winged ... 85 6e-16 UniRef50_B7HUH0 DNA-binding response regulator n=65 Tax=Firmicut... 85 6e-16 UniRef50_B2TIW8 Alkaline phosphatase synthesis transcriptional r... 85 6e-16 UniRef50_D2BK97 Two-component system, response regulator n=5 Tax... 85 6e-16 UniRef50_A7GB96 DNA-binding response regulator n=16 Tax=Bacteria... 85 6e-16 UniRef50_A8LHM5 Two component transcriptional regulator, winged ... 85 6e-16 UniRef50_B6FMI5 Putative uncharacterized protein n=7 Tax=Clostri... 85 6e-16 UniRef50_UPI0001C37682 two component transcriptional regulator n... 85 6e-16 UniRef50_Q44929 Response regulator gtcR n=8 Tax=Firmicutes RepID... 85 6e-16 UniRef50_B8HL49 Multi-component transcriptional regulator, winge... 85 6e-16 UniRef50_Q72TM3 Response regulator n=2 Tax=Leptospira interrogan... 85 7e-16 UniRef50_Q63CK0 Response regulator n=95 Tax=Firmicutes RepID=Q63... 85 7e-16 UniRef50_A7BVU1 DNA-binding response regulator PhoB n=1 Tax=Begg... 85 7e-16 UniRef50_Q2G7V2 Two component transcriptional regulator, winged ... 85 7e-16 UniRef50_C3XKF1 DNA-binding response regulator n=4 Tax=Campyloba... 85 7e-16 UniRef50_B6ITF9 TorCAD operon transcriptional regulatory protein... 85 7e-16 UniRef50_D1AFR9 Two component transcriptional regulator, winged ... 85 7e-16 UniRef50_A1R850 DNA-binding response regulator n=45 Tax=Actinoba... 85 7e-16 UniRef50_D1VT63 Regulatory protein VanR n=1 Tax=Peptoniphilus la... 85 7e-16 UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=... 85 8e-16 UniRef50_B9YAL6 Putative uncharacterized protein n=1 Tax=Holdema... 85 8e-16 UniRef50_C6J4Z6 Two component transcriptional regulator n=1 Tax=... 85 8e-16 UniRef50_B7JF46 DNA-binding response regulator n=87 Tax=Bacteria... 85 8e-16 UniRef50_B5CLM3 Putative uncharacterized protein n=1 Tax=Ruminoc... 85 8e-16 UniRef50_A5ZPI0 Putative uncharacterized protein n=6 Tax=Bacteri... 85 8e-16 UniRef50_UPI00016988BE Two component Transcriptional regulator, ... 85 8e-16 UniRef50_Q99U73 Response regulator arlR n=10 Tax=Firmicutes RepI... 85 8e-16 UniRef50_B9KBQ0 Response regulator n=6 Tax=Thermotogaceae RepID=... 85 8e-16 UniRef50_Q04942 Transcriptional regulatory protein afsQ1 n=34 Ta... 85 8e-16 UniRef50_Q47ZA2 DNA-binding response regulator n=20 Tax=Alteromo... 85 8e-16 UniRef50_A6M2A3 Two component transcriptional regulator, winged ... 85 8e-16 UniRef50_D2QX61 Two component transcriptional regulator, winged ... 85 8e-16 UniRef50_C8NR68 DNA-binding response regulator n=12 Tax=Bacteria... 85 9e-16 UniRef50_UPI0001C37B2E two component transcriptional regulator n... 85 9e-16 UniRef50_B3QUP3 Two component transcriptional regulator, winged ... 85 9e-16 UniRef50_A7VHB9 Putative uncharacterized protein n=5 Tax=Firmicu... 85 9e-16 UniRef50_C1A8B6 OmpR family two-component response regulator n=1... 85 9e-16 UniRef50_Q188S4 Putative lantibiotic resistance two-component re... 85 9e-16 UniRef50_Q187R8 Two-component response regulator n=6 Tax=Clostri... 85 9e-16 UniRef50_B2HJN8 Transcriptional regulatory protein n=15 Tax=Myco... 84 9e-16 UniRef50_C4KYM3 Two component transcriptional regulator, winged ... 84 9e-16 UniRef50_Q398T9 Two component transcriptional regulator, winged ... 84 9e-16 UniRef50_C1IA20 Two-component system response regulator n=1 Tax=... 84 9e-16 UniRef50_C0CKG8 Putative uncharacterized protein n=1 Tax=Blautia... 84 1e-15 UniRef50_C3WHY2 Two-component response regulator n=8 Tax=Fusobac... 84 1e-15 UniRef50_C7R7C9 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_B0S0W9 Two-component response regulator n=9 Tax=Clostri... 84 1e-15 UniRef50_C8WPK8 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_Q1NLC6 Response regulator receiver n=3 Tax=Deltaproteob... 84 1e-15 UniRef50_C6D3C2 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A6M1X5 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A1VB66 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A8VQC0 Response regulator receiver protein n=2 Tax=Baci... 84 1e-15 UniRef50_C7Q501 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A7BB43 Putative uncharacterized protein n=2 Tax=Actinom... 84 1e-15 UniRef50_A8LWI8 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_C8WIG3 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_B0G7M7 Putative uncharacterized protein n=2 Tax=Clostri... 84 1e-15 UniRef50_Q0IAU4 Two-component response regulator n=1 Tax=Synecho... 84 1e-15 UniRef50_B6BWN6 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_Q2JGV9 Response regulator receiver protein n=1 Tax=Fran... 84 1e-15 UniRef50_P50351 Transcriptional regulatory protein chvI n=188 Ta... 84 1e-15 UniRef50_A5MZ62 Transcriptional regulator n=27 Tax=Bacteria RepI... 84 1e-15 UniRef50_Q7UPW2 Two-component response regulator n=1 Tax=Rhodopi... 84 1e-15 UniRef50_C8P150 Regulatory protein VanR n=1 Tax=Erysipelothrix r... 84 1e-15 UniRef50_UPI0001973D88 response regulator DrrA n=1 Tax=Clostridi... 84 1e-15 UniRef50_Q1GKH2 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_C4Z360 Two-component system, OmpR family, response regu... 84 1e-15 UniRef50_C7MP89 Response regulator with CheY-like receiver domai... 84 1e-15 UniRef50_B2TI09 Two-component response regulator n=3 Tax=Clostri... 84 1e-15 UniRef50_Q1IHU2 Lysine decarboxylase transcriptional regulator, ... 84 1e-15 UniRef50_C8UTJ5 Two-component response regulator n=9 Tax=Lactoba... 84 1e-15 UniRef50_Q0TP36 DNA-binding response regulator n=142 Tax=Bacteri... 84 1e-15 UniRef50_C8WMT6 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_D2QKB6 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A9AWE4 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_D1CTN9 Phosphate regulon two component response regulat... 84 1e-15 UniRef50_B5HID4 Two-component system response regulator n=3 Tax=... 84 1e-15 UniRef50_D0LJX0 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_A9FZS4 Response regulator n=2 Tax=Myxococcales RepID=A9... 84 1e-15 UniRef50_C6WE10 Putative two component transcriptional regulator... 84 1e-15 UniRef50_C1F979 DNA-binding response regulator n=1 Tax=Acidobact... 84 1e-15 UniRef50_B7IIP6 Transcriptional regulatory protein ResD n=34 Tax... 84 1e-15 UniRef50_A0PWB4 Response regulator mprA n=284 Tax=Bacteria RepID... 84 1e-15 UniRef50_C7TGP3 Two-component response regulator n=8 Tax=Lactoba... 84 1e-15 UniRef50_B5VWD3 Multi-component transcriptional regulator, winge... 84 1e-15 UniRef50_B0SY74 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_D1X187 Two component transcriptional regulator, winged ... 84 1e-15 UniRef50_Q2IUG0 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_A4J7U5 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_C5AL42 Response regulator consisting of a CheY-like rec... 84 2e-15 UniRef50_C9XRU4 Two-component system response regulator n=12 Tax... 84 2e-15 UniRef50_UPI0001787E68 two component transcriptional regulator, ... 84 2e-15 UniRef50_C0ET35 Putative uncharacterized protein n=1 Tax=Eubacte... 84 2e-15 UniRef50_A5EYW4 Transcriptional regulator n=31 Tax=Bacteria RepI... 84 2e-15 UniRef50_B1HXG4 DNA-binding response regulator n=2 Tax=Bacillace... 84 2e-15 UniRef50_C4XS15 OmpR family two-component response regulator n=2... 84 2e-15 UniRef50_A5GA68 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_A7GLY2 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_Q3ZVS3 DNA-binding response regulator n=4 Tax=Dehalococ... 84 2e-15 UniRef50_A0RL52 DNA-binding response regulator n=93 Tax=Firmicut... 84 2e-15 UniRef50_Q6MA20 Putative two-component response regulator phoP n... 84 2e-15 UniRef50_Q88HA6 Transcriptional regulatory protein RstA, putativ... 84 2e-15 UniRef50_Q83N47 Two-component system response regulator n=8 Tax=... 84 2e-15 UniRef50_C6PQ36 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_A1S1W0 Response regulator receiver protein n=1 Tax=Shew... 84 2e-15 UniRef50_C8VYB2 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_B9JNY4 Phosphate regulon transcriptional regulatory pro... 84 2e-15 UniRef50_C3M7Y9 Transcriptional regulator n=27 Tax=Vibrionaceae ... 84 2e-15 UniRef50_A6BKE3 Putative uncharacterized protein n=3 Tax=Clostri... 84 2e-15 UniRef50_C9Y9A3 Transcriptional regulatory protein ompR n=1 Tax=... 84 2e-15 UniRef50_B0G6B9 Putative uncharacterized protein n=4 Tax=Clostri... 84 2e-15 UniRef50_C6D0Z2 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_Q3A1Q2 Two component transcriptional regulator, winged ... 84 2e-15 UniRef50_Q2RPG3 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_C0CLW6 Putative uncharacterized protein n=1 Tax=Blautia... 83 2e-15 UniRef50_B5VW75 Multi-component transcriptional regulator, winge... 83 2e-15 UniRef50_C9Z8Q7 Putative two-component response regulator n=1 Ta... 83 2e-15 UniRef50_B0ACA3 Putative uncharacterized protein n=1 Tax=Clostri... 83 2e-15 UniRef50_A5FVA6 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_C6X1B3 Phosphate regulon transcriptional regulatory pro... 83 2e-15 UniRef50_B9XE94 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_Q49XM7 Response regulator arlR n=145 Tax=Bacteria RepID... 83 2e-15 UniRef50_A0RG02 Two-component response regulator n=92 Tax=Bacter... 83 2e-15 UniRef50_Q2W3Z2 Response regulator consisting of a CheY-like rec... 83 2e-15 UniRef50_A0YRX3 Two-component response regulator n=1 Tax=Lyngbya... 83 2e-15 UniRef50_B6IYL9 Two-component response regulator GltR n=1 Tax=Rh... 83 2e-15 UniRef50_D1CGU9 Two component transcriptional regulator, winged ... 83 2e-15 UniRef50_C1I9Y7 Two component transcriptional regulator n=1 Tax=... 83 2e-15 UniRef50_A2CD17 Two-component response regulator n=58 Tax=Cyanob... 83 2e-15 UniRef50_A3ER20 Putative two component transcriptional regulator... 83 3e-15 UniRef50_Q47IJ9 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_C7N0P4 Response regulator with CheY-like receiver domai... 83 3e-15 UniRef50_B8FY05 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_UPI0001C4272B hypothetical protein BpOF4_20304 n=2 Tax=... 83 3e-15 UniRef50_C1A1E5 Turgor pressure transcriptional regulator n=5 Ta... 83 3e-15 UniRef50_C4Z9T4 Putative uncharacterized protein n=1 Tax=Eubacte... 83 3e-15 UniRef50_Q82EB1 Transcriptional regulatory protein cseB n=29 Tax... 83 3e-15 UniRef50_A3Z9V3 Two-component response regulator n=1 Tax=Synecho... 83 3e-15 UniRef50_D1VJ14 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_Q2J7U7 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_C7QZL8 Putative two component transcriptional regulator... 83 3e-15 UniRef50_B8IM29 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_A9D5A2 Osmolarity response regulator n=1 Tax=Hoeflea ph... 83 3e-15 UniRef50_C0ZIT9 Two-component response regulator n=2 Tax=Bacilla... 83 3e-15 UniRef50_B8I8Q2 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_C6HXQ3 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_A4SHT1 Two-component system response regulator n=10 Tax... 83 3e-15 UniRef50_C4I5X0 DNA-binding response regulator n=78 Tax=Bacteria... 83 3e-15 UniRef50_B1XPE6 Two-component response regulator; transcriptiona... 83 3e-15 UniRef50_A6VT30 Two component transcriptional regulator, winged ... 83 3e-15 UniRef50_A6TSH7 Two component transcriptional regulator, winged ... 82 3e-15 UniRef50_C4ZEN6 Two component transcriptional regulator, winged ... 82 3e-15 UniRef50_A9AUH9 Two component transcriptional regulator, winged ... 82 3e-15 UniRef50_C9ZAU5 Putative two-component system response regulator... 82 4e-15 UniRef50_C7MMC5 Response regulator with CheY-like receiver domai... 82 4e-15 UniRef50_A5VAJ0 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_B1YLJ6 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_A3Q549 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_C6LCG6 Phosphate regulon transcriptional regulatory pro... 82 4e-15 UniRef50_C0ZDJ8 Two-component response regulator n=5 Tax=Firmicu... 82 4e-15 UniRef50_A3NL94 DNA-binding response regulator n=27 Tax=pseudoma... 82 4e-15 UniRef50_C4RMB5 Two-component system response regulator n=1 Tax=... 82 4e-15 UniRef50_B8FQS3 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_C4DQ28 Response regulator with CheY-like receiver domai... 82 4e-15 UniRef50_O66657 Transcriptional regulator (PhoB-like) n=2 Tax=Aq... 82 4e-15 UniRef50_B0RLM8 Transcriptional regulator n=6 Tax=Xanthomonas Re... 82 4e-15 UniRef50_A5N339 Predicted transcriptional regulator n=4 Tax=Clos... 82 4e-15 UniRef50_Q2S740 Response regulator consisting of a CheY-like rec... 82 4e-15 UniRef50_Q12RS3 Transcriptional regulatory protein-like protein ... 82 4e-15 UniRef50_B5IMP1 Two-component response regulator n=1 Tax=Cyanobi... 82 4e-15 UniRef50_A6W7C9 Two component transcriptional regulator, winged ... 82 4e-15 UniRef50_A1S359 Putative transcriptional regulator, CadC n=1 Tax... 82 4e-15 UniRef50_Q631U4 Response regulator n=1 Tax=Bacillus cereus E33L ... 82 4e-15 UniRef50_C5NUZ8 Response regulator ArlR n=4 Tax=Bacteria RepID=C... 82 4e-15 UniRef50_B9T9H2 Putative uncharacterized protein n=1 Tax=Ricinus... 82 4e-15 UniRef50_A9ANV0 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_C3JQ04 Transcriptional regulatory protein n=2 Tax=Rhodo... 82 5e-15 UniRef50_A4WZ32 Transposase and inactivated derivatives-like pro... 82 5e-15 UniRef50_UPI0001787D57 two component transcriptional regulator, ... 82 5e-15 UniRef50_A4FGQ8 Putative uncharacterized protein n=1 Tax=Sacchar... 82 5e-15 UniRef50_A9KJT6 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_C6LI81 DNA-binding response regulator DltR n=2 Tax=Clos... 82 5e-15 UniRef50_A9KSV1 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_C6AWS7 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_B6R2K8 Two component transcriptional regulator, winged ... 82 5e-15 UniRef50_Q6FEG0 Transcriptional regulator protein (OmpR family),... 82 5e-15 UniRef50_Q21HG9 Transcriptional regulatory protein-like protein ... 82 5e-15 UniRef50_C2BEN4 Possible response regulator n=3 Tax=Anaerococcus... 82 6e-15 UniRef50_A5N5X6 Transcriptional regulator n=5 Tax=Clostridium Re... 82 6e-15 UniRef50_D1AJ61 Two component transcriptional regulator, winged ... 82 6e-15 UniRef50_C8WHB5 Two component transcriptional regulator, winged ... 82 6e-15 UniRef50_A8ZNT0 Two-component transcriptional regulator/diguanyl... 82 6e-15 UniRef50_P08368 Transcriptional regulatory protein creB n=64 Tax... 82 6e-15 UniRef50_B7KB48 Multi-component transcriptional regulator, winge... 82 6e-15 UniRef50_UPI0001AEBEBF two component transcriptional regulator, ... 82 6e-15 UniRef50_B1HZW1 Transcriptional regulatory protein cutR (Defecti... 82 6e-15 UniRef50_B6GBG2 Putative uncharacterized protein n=2 Tax=Collins... 82 6e-15 UniRef50_C0QFG8 Two-component DNA-binding response regulator n=1... 82 6e-15 UniRef50_C7QI13 Two component transcriptional regulator, winged ... 82 6e-15 UniRef50_C6B8S5 Two component transcriptional regulator, winged ... 82 6e-15 UniRef50_A5Z504 Putative uncharacterized protein n=5 Tax=Clostri... 82 6e-15 UniRef50_B5W2T9 Multi-component transcriptional regulator, winge... 82 6e-15 UniRef50_A8W7F8 Putative regulator n=1 Tax=Streptomyces refuineu... 82 7e-15 UniRef50_Q1LCD6 Two component transcriptional regulator, winged ... 82 7e-15 UniRef50_Q1QYP1 Two component transcriptional regulator, winged ... 82 7e-15 UniRef50_A6DFF3 DNA-binding response regulator n=2 Tax=Lentispha... 82 7e-15 UniRef50_C0YPJ5 DNA-binding response regulator n=1 Tax=Chryseoba... 82 7e-15 UniRef50_Q12PS6 Two component transcriptional regulator, winged ... 82 7e-15 UniRef50_UPI0001AF1AC1 two-component system response regulator n... 82 7e-15 UniRef50_D1VF89 Two component transcriptional regulator, winged ... 82 7e-15 UniRef50_B2XT10 Transcriptional regulatory protein 1 n=3 Tax=Het... 82 7e-15 UniRef50_C1A710 OmpR family two-component response regulator n=1... 82 7e-15 UniRef50_C1SI97 Response regulator with CheY-like receiver domai... 82 7e-15 UniRef50_C9XJX9 Two-component system response regulator n=108 Ta... 82 7e-15 UniRef50_B0RZK9 Two-component response regulator n=2 Tax=Finegol... 82 7e-15 UniRef50_C3X641 Two component transcriptional regulator n=1 Tax=... 82 7e-15 UniRef50_B6BUZ2 Two component transcriptional regulator, winged ... 82 7e-15 UniRef50_A4W108 Response regulator consisting of a CheY-like rec... 82 7e-15 UniRef50_UPI0001C321CD putative two component transcriptional re... 82 7e-15 UniRef50_Q1D8M8 DNA-binding response regulator PhoP2 n=4 Tax=Myx... 82 7e-15 UniRef50_D1B9J7 Two component transcriptional regulator, winged ... 82 8e-15 UniRef50_C7ND40 Two component transcriptional regulator, winged ... 82 8e-15 UniRef50_B2IXN9 Multi-component transcriptional regulator, winge... 81 8e-15 UniRef50_A6TSQ9 Two component transcriptional regulator, winged ... 81 8e-15 UniRef50_Q3Z753 DNA-binding response regulator n=2 Tax=Dehalococ... 81 8e-15 UniRef50_Q6AQP4 Probable two-component system response regulator... 81 8e-15 UniRef50_C8W041 Two component transcriptional regulator, winged ... 81 8e-15 UniRef50_Q1YN14 Putative transcriptional regulator n=1 Tax=Auran... 81 8e-15 UniRef50_Q01473 Protein rcaC n=1 Tax=Fremyella diplosiphon RepID... 81 8e-15 UniRef50_A4AIS8 Two-component system, regulatory protein n=2 Tax... 81 8e-15 UniRef50_B1HT37 Transcriptional regulatory protein srrA (Staphyl... 81 9e-15 UniRef50_Q1ASD3 Two component transcriptional regulator, winged ... 81 9e-15 UniRef50_Q0EY91 Two comoponent transcriptional regulator, winged... 81 9e-15 UniRef50_C7MDU8 Response regulator with CheY-like receiver domai... 81 9e-15 UniRef50_D1C556 Two component transcriptional regulator, winged ... 81 9e-15 UniRef50_UPI0001C1726B Multi-component Transcriptional regulator... 81 9e-15 UniRef50_Q98AP0 Phosphate regulatory protein n=2 Tax=Mesorhizobi... 81 9e-15 UniRef50_B1WTP9 Two-component response regulator n=12 Tax=Cyanob... 81 9e-15 UniRef50_B5HT18 Repressor-response regulator n=1 Tax=Streptomyce... 81 9e-15 UniRef50_A9BIE2 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_B1IAB9 VncR, response regulator n=69 Tax=Firmicutes Rep... 81 1e-14 UniRef50_B1I7Y4 Response regulator SaeR n=46 Tax=Firmicutes RepI... 81 1e-14 UniRef50_C3WA46 Two-component response regulator n=6 Tax=Fusobac... 81 1e-14 UniRef50_D0Z2F0 DNA-binding response regulator n=1 Tax=Photobact... 81 1e-14 UniRef50_Q020N6 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q0AKG2 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A6T3B9 Two components system response regulator n=48 Ta... 81 1e-14 UniRef50_C8WG99 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_C7S7A3 LRA-16 n=2 Tax=Bacteria RepID=C7S7A3_9BACT 81 1e-14 UniRef50_Q8DHN5 Two-component response regulator n=2 Tax=Chrooco... 81 1e-14 UniRef50_C6WIA6 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q9F5J0 Sim1 n=2 Tax=Streptomyces antibioticus RepID=Q9F... 81 1e-14 UniRef50_Q5WC24 Two-component response regulator n=1 Tax=Bacillu... 81 1e-14 UniRef50_A8ZMT3 Transcriptional regulatory protein, C terminal d... 81 1e-14 UniRef50_D1AQD9 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q7ULL1 Two-component system response regulator n=1 Tax=... 81 1e-14 UniRef50_C1FSZ1 Regulatory protein VanR n=16 Tax=Firmicutes RepI... 81 1e-14 UniRef50_B7GFY6 DNA-binding response regulator, OmpR family (REC... 81 1e-14 UniRef50_A8L7H2 Putative two component transcriptional regulator... 81 1e-14 UniRef50_C0Z911 Two-component response regulator n=4 Tax=Firmicu... 81 1e-14 UniRef50_B7IXR9 DNA-binding response regulator n=167 Tax=Bacilli... 81 1e-14 UniRef50_UPI0001C35523 two component transcriptional regulator, ... 81 1e-14 UniRef50_Q0VLF7 DNA-binding heavy metal response regulator, puta... 81 1e-14 UniRef50_C3JSB6 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A9F790 Two component system transcriptional regulatory ... 81 1e-14 UniRef50_Q01ZD3 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q3JG93 Response regulator protein n=61 Tax=Proteobacter... 81 1e-14 UniRef50_C1ACD7 OmpR family two-component response regulator n=1... 81 1e-14 UniRef50_D2R142 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A8L9L0 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_Q1IUD6 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_P15795 Cholera toxin transcriptional activator n=121 Ta... 81 1e-14 UniRef50_C4L2J9 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_C1F3P9 Transcriptional regulator, putative n=1 Tax=Acid... 81 1e-14 UniRef50_C1I8T8 Two-component system response regulator n=2 Tax=... 81 1e-14 UniRef50_B0MTN6 Putative uncharacterized protein n=1 Tax=Alistip... 81 1e-14 UniRef50_D1SG74 Putative two component transcriptional regulator... 81 1e-14 UniRef50_C9YZ98 Putative two component response regulator n=1 Ta... 81 1e-14 UniRef50_B3E0R0 DNA-binding response regulator KdpE (REC-wHTH do... 81 1e-14 UniRef50_Q47QJ3 Response regulator receiver n=1 Tax=Thermobifida... 81 1e-14 UniRef50_A4AF30 Two component transcriptional regulator, winged ... 81 1e-14 UniRef50_A4X6U8 Transcriptional regulator domain protein n=4 Tax... 81 1e-14 UniRef50_A8HY28 Response regulator receiver n=2 Tax=Alphaproteob... 81 1e-14 UniRef50_Q47PT2 Similar to Response regulators consisting of a C... 81 1e-14 UniRef50_Q6MHZ0 Two component response regulator n=1 Tax=Bdellov... 81 1e-14 UniRef50_C9B9W7 Transcriptional regulator n=12 Tax=cellular orga... 81 1e-14 UniRef50_B0S387 Two-component response regulator n=6 Tax=Clostri... 81 2e-14 UniRef50_C7H9H0 Subtilin biosynthesis regulatory protein SpaR n=... 81 2e-14 UniRef50_Q5LZ35 Response regulator (Homolog to RR01Spn & Sth) n=... 81 2e-14 UniRef50_A5CFS8 Transcriptional regulator n=1 Tax=uncultured mar... 81 2e-14 UniRef50_Q7NGT9 Two-component response regulator n=1 Tax=Gloeoba... 81 2e-14 UniRef50_B4WPA6 Response regulator receiver domain protein n=1 T... 81 2e-14 UniRef50_B0P857 Putative uncharacterized protein n=1 Tax=Anaerot... 81 2e-14 UniRef50_A7BNW6 Two component response regulator n=1 Tax=Beggiat... 81 2e-14 UniRef50_C6LHZ3 Regulatory protein VanR n=2 Tax=Clostridiales Re... 81 2e-14 UniRef50_B2V1F5 Two component response regulator n=6 Tax=Bacteri... 81 2e-14 UniRef50_C7Q2J4 Two component transcriptional regulator, winged ... 81 2e-14 UniRef50_D2LS32 Two component transcriptional regulator, winged ... 81 2e-14 UniRef50_C8NDP1 DNA-binding response regulator n=2 Tax=Firmicute... 81 2e-14 UniRef50_B2TMQ5 Regulatory protein VanR n=5 Tax=Clostridium RepI... 80 2e-14 UniRef50_C8WKQ8 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_A5GMH0 Two-component sytem response regulator n=10 Tax=... 80 2e-14 UniRef50_B2D6Y9 ToxR n=2 Tax=Vibrio cholerae RepID=B2D6Y9_VIBCH 80 2e-14 UniRef50_A9KX94 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_A9FLR1 DNA-binding response regulator n=1 Tax=Sorangium... 80 2e-14 UniRef50_A5MZN8 Predicted transcriptional regulator n=2 Tax=Clos... 80 2e-14 UniRef50_Q0I8A9 DNA-binding response regulator n=13 Tax=Cyanobac... 80 2e-14 UniRef50_B6QXV6 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_A8EX60 Two-component response regulator n=2 Tax=Epsilon... 80 2e-14 UniRef50_D2PKG5 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_C6LFN3 DNA-binding response regulator ResD n=21 Tax=Bac... 80 2e-14 UniRef50_C9ZA01 Putative two-component system response regulator... 80 2e-14 UniRef50_Q81I47 Two-component response regulator n=76 Tax=Firmic... 80 2e-14 UniRef50_C9PHD6 Transcriptional activator ToxR n=1 Tax=Vibrio fu... 80 2e-14 UniRef50_Q2JIE3 DNA-binding response regulator n=12 Tax=Cyanobac... 80 2e-14 UniRef50_B8HC02 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_B4CUK8 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_UPI000050FFEF putative two component transcriptional re... 80 2e-14 UniRef50_A4YSP3 Putative uncharacterized protein n=1 Tax=Bradyrh... 80 2e-14 UniRef50_C0YVQ4 Response regulator n=1 Tax=Chryseobacterium gleu... 80 2e-14 UniRef50_D1CB22 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_C0Z5X8 Two-component response regulator n=143 Tax=Firmi... 80 2e-14 UniRef50_Q0K8J0 Response regulator, OmpR-family n=10 Tax=Proteob... 80 2e-14 UniRef50_C9NBD5 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_Q2RYR0 Response regulator receiver domain protein n=2 T... 80 2e-14 UniRef50_C1F588 TcrA n=1 Tax=Acidobacterium capsulatum ATCC 5119... 80 2e-14 UniRef50_P76340 Probable transcriptional regulatory protein yedW... 80 2e-14 UniRef50_A6VYK9 Two component transcriptional regulator, winged ... 80 2e-14 UniRef50_Q3DCX6 DNA-binding response regulator n=7 Tax=Streptoco... 80 2e-14 UniRef50_A1SMF6 Transcriptional regulator domain protein n=1 Tax... 80 2e-14 UniRef50_B7RXJ1 Response regulator receiver domain protein n=1 T... 80 2e-14 UniRef50_C8WHK8 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_C4ZI38 DNA-binding response regulator, OmpR family (Rec... 80 3e-14 UniRef50_C7IHB4 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_Q12S47 Transcriptional regulatory protein-like protein ... 80 3e-14 UniRef50_A5FEG3 Two-component transcriptional regulator, winged ... 80 3e-14 UniRef50_A0PNV3 Two component regulator-receiver domain n=6 Tax=... 80 3e-14 UniRef50_C9XT65 Two-component response regulator n=18 Tax=Bacter... 80 3e-14 UniRef50_Q1N9M7 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_C6RM27 Transcriptional regulatory protein QseB n=1 Tax=... 80 3e-14 UniRef50_B2UQC6 Two component transcriptional regulator, winged ... 80 3e-14 UniRef50_C6LFE5 DNA-binding response regulator CsrR n=2 Tax=Firm... 80 3e-14 UniRef50_D2YQP0 Transmembrane regulatory protein ToxR n=7 Tax=Vi... 80 3e-14 UniRef50_C6D1N2 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_C1AAZ5 Phosphate regulon transcriptional regulatory pro... 79 3e-14 UniRef50_A0AHH4 Complete genome n=7 Tax=Listeria RepID=A0AHH4_LISW6 79 3e-14 UniRef50_Q2BRQ1 Transcriptional regulatory protein CpxR (Fragmen... 79 3e-14 UniRef50_Q03V75 DNA-binding response regulator, OmpR family (Rec... 79 3e-14 UniRef50_Q893J9 Transcriptional regulatory protein n=1 Tax=Clost... 79 3e-14 UniRef50_C7QB96 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_D1VGE4 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_C7I2P3 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_A4T1Y6 Response regulator receiver protein n=8 Tax=Myco... 79 3e-14 UniRef50_Q2NZ71 Two-component system regulatory protein n=18 Tax... 79 3e-14 UniRef50_Q82BP8 Putative two-component system response regulator... 79 3e-14 UniRef50_C6VUR1 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_B8IF93 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_C8SEM3 Two component transcriptional regulator, winged ... 79 3e-14 UniRef50_C6J108 Multi-component transcriptional regulator n=2 Ta... 79 3e-14 UniRef50_A8ZMZ0 Two-component response regulator n=1 Tax=Acaryoc... 79 4e-14 UniRef50_C8WMN2 Two component transcriptional regulator, winged ... 79 4e-14 UniRef50_B4WG55 Response regulator receiver domain protein n=1 T... 79 4e-14 UniRef50_A4TWE5 Two component response regulator n=1 Tax=Magneto... 79 4e-14 UniRef50_C6LDD6 DNA-binding response regulator n=3 Tax=Clostridi... 79 4e-14 UniRef50_B9Y2I0 Putative uncharacterized protein n=3 Tax=Firmicu... 79 4e-14 UniRef50_A8SYK9 Putative uncharacterized protein n=3 Tax=Clostri... 79 4e-14 UniRef50_C5B7S6 Transcriptional activator CadC n=2 Tax=Enterobac... 79 4e-14 Sequences not found previously or not previously below threshold: >UniRef50_P94504 Transcriptional regulatory protein yvrH n=5 Tax=Bacillus RepID=YVRH_BACSU Length = 237 Score = 116 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +FCE+P + S+ ++ +K+ G + TV V IR++R+ E P PE I T+ G Sbjct: 165 LQYFCEHPNVVLSKDQIYEKVWGYPSYGDNNTVMVHIRKLREKIERDPSNPEYIVTVRGL 224 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 225 GYRFIPNPE 233 >UniRef50_A8F5W8 Two component transcriptional regulator, winged helix family n=24 Tax=Bacteria RepID=A8F5W8_THELT Length = 263 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 39/70 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN GK+ SR LL K+ G + RTVDV IRR+R E P P+ I T+ G+ Sbjct: 193 LRFLAENEGKVFSRDVLLDKLWGYDYYGDTRTVDVHIRRLRTKIEEDPSNPKYIITVRGK 252 Query: 62 GYRFCGDLED 71 GY+F ++ Sbjct: 253 GYKFRDPGKE 262 >UniRef50_Q65F19 Two-component response regulator YvrH n=85 Tax=Firmicutes RepID=Q65F19_BACLD Length = 242 Score = 111 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 40/68 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +FC++P ++ S+ ++ +K+ G TV V IR++R+ E P +PE I TI G Sbjct: 168 LQYFCDHPNRVLSKDQIYEKVWGVPSYGDSNTVMVHIRKLREKIEKDPSSPEYIVTIRGL 227 Query: 62 GYRFCGDL 69 GY+F + Sbjct: 228 GYKFVPNP 235 >UniRef50_B2J8Q5 Two component transcriptional regulator, winged helix family n=8 Tax=Cyanobacteria RepID=B2J8Q5_NOSP7 Length = 239 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P + SR +L++K+ G + R VDV I ++RK E P PE I T+ G Sbjct: 166 ILHFLASHPNQAWSRPQLIQKIWGCDYVGDGRVVDVHIGQLRKKMEVDPSVPEFIKTVRG 225 Query: 61 EGYRFCGDLED 71 GY+F E+ Sbjct: 226 YGYKFEAPDEN 236 >UniRef50_Q1AZ24 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZ24_RUBXD Length = 234 Score = 109 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG++ SR +++ + G E R+ DV I+ +R+ E P P I T+ G Sbjct: 167 VLALLASNPGRVYSREQIMDHLWGGEFFGEPRSADVHIQHLRQKIEPDPKNPRYIQTVRG 226 Query: 61 EGYRFCG 67 GYRF Sbjct: 227 MGYRFAE 233 >UniRef50_D2Q6K7 Response regulator-like transcriptional regulatory protein n=7 Tax=Bifidobacterium RepID=D2Q6K7_9BIFI Length = 253 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ +RA+LL+++ G + RTVDV IRR+R + +I T+ Sbjct: 168 LKYLVQHPGRVFTRAQLLQEVWGYDYYGGTRTVDVHIRRLRAKLG--GEYEHVIGTVRNV 225 Query: 62 GYRFCGDLED 71 GYRF E+ Sbjct: 226 GYRFDPPEEE 235 >UniRef50_B7GTW3 Response regulator receiver protein n=6 Tax=Bifidobacteriaceae RepID=B7GTW3_BIFLI Length = 266 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ +RA+LL+++ G + RTVDV IRR+R + +I T+ Sbjct: 169 LKYLVQHPGRVFTRAQLLQEVWGYDYYGGTRTVDVHIRRLRAKLG--GEYEHLIGTVRNV 226 Query: 62 GYRFCGDLED 71 GYRF D Sbjct: 227 GYRFDPPETD 236 >UniRef50_C8VW64 Two component transcriptional regulator, winged helix family n=4 Tax=Clostridia RepID=C8VW64_DESAS Length = 229 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ ++A LL K+ D TV V IRR+R+ E+ P PE I T+ G Sbjct: 162 LWLMASNPNRVFTKAHLLDKIWDSSFYGDDNTVTVHIRRLREKVETDPSNPEYIKTVWGM 221 Query: 62 GYRFCGD 68 GY+F + Sbjct: 222 GYKFEYE 228 >UniRef50_Q2RZP5 Response regulator DrrA n=11 Tax=Bacteria RepID=Q2RZP5_SALRD Length = 245 Score = 107 bits (270), Expect = 9e-23, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +PG+ SR ELL ++ G + + TV+ I R+R E P P + T+ G Sbjct: 171 LLLFARHPGRAFSRDELLDEVWGYQYSGYSHTVNTHINRLRNKIEPDPSEPRYVKTVWGV 230 Query: 62 GYRFCGDLE 70 GYRF E Sbjct: 231 GYRFAEREE 239 >UniRef50_Q1IMA9 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q1IMA9_ACIBL Length = 230 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R +LL + R+VDV +RRIR+ E P+ P + T+ G Sbjct: 163 LEYLARHPGRVFTRDQLLDAVWRETHYVTPRSVDVYVRRIREKIEENPEDPRYLKTVRGA 222 Query: 62 GYRFCGD 68 GYRF Sbjct: 223 GYRFEVP 229 >UniRef50_Q05943 Transcriptional regulatory protein glnR n=102 Tax=Bacteria RepID=GLNR_STRCO Length = 267 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ +RA+LL+++ G + RTVDV +RR+R P+ +I T+ Sbjct: 158 LKYLAQHPGRVFTRAQLLQEVWGYDYFGGTRTVDVHVRRLRAKLG--PEHESLIGTVRNV 215 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 216 GYRFVTPEK 224 >UniRef50_C6JFQ6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFQ6_9FIRM Length = 139 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG++ S+ ++ + V I IR+ E P P I T+ G Sbjct: 68 ILQLLAQNPGRVFSKEQIYDIVWKESYFGDYNIVMSHISHIREKIEDDPGNPVYIQTVWG 127 Query: 61 EGYRFCGD 68 GY+F Sbjct: 128 VGYKFNEK 135 >UniRef50_Q8DLA7 Two-component response regulator n=20 Tax=Bacteria RepID=Q8DLA7_THEEB Length = 256 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ R +LL ++ G + +TVDV IR +R+ E+ P P+ I T+ G Sbjct: 192 LELFMRHPRRVWPREQLLDQVWGPDFVGDSKTVDVHIRWLREKIETDPSHPQYILTVRGF 251 Query: 62 GYRF 65 GYRF Sbjct: 252 GYRF 255 >UniRef50_Q7NMA6 Two-component response regulator n=2 Tax=Bacteria RepID=Q7NMA6_GLOVI Length = 238 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 41/69 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG++ SR ELL+++ G + + RT+DV +R++R+ E P P + T+ G Sbjct: 170 LAQLADHPGRVYSRDELLERVWGYDFEGGHRTIDVHVRKLREKLEPDPTRPVYVLTVWGV 229 Query: 62 GYRFCGDLE 70 GY+F G Sbjct: 230 GYKFAGPPR 238 >UniRef50_A4J267 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J267_DESRM Length = 232 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P +I SR +LL+++ + + TV V IRR+R+ E PE+I T+ G Sbjct: 164 LWLMASHPNQIFSRLQLLEQIWESHFEGDEDTVTVHIRRLRRKIERDAAKPELIKTVWGV 223 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 224 GYKFEAPKE 232 >UniRef50_Q2BDN1 Two component transcriptional regulator, winged helix family protein n=2 Tax=Firmicutes RepID=Q2BDN1_9BACI Length = 234 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G++ S L + G++ RTV V I +RK E P PE I T+ G Sbjct: 168 LCCLAENAGRVFSAEHLFDSIWGKDSFGDIRTVMVHISNLRKKIEQDPARPEYIITVRGM 227 Query: 62 GYRFCG 67 GY+F G Sbjct: 228 GYKFNG 233 >UniRef50_A6EAJ4 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAJ4_9SPHI Length = 206 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 41/67 (61%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+F NP K+ +R L+ ++ G + RT+D+ I R+RK E+ PD P+++ T+ G Sbjct: 139 ILLYFLRNPNKVINRDALMLEVWGYNSDVNTRTLDMHIVRLRKKIEANPDNPQLLQTVRG 198 Query: 61 EGYRFCG 67 GYRF Sbjct: 199 IGYRFNP 205 >UniRef50_C9KKD5 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKD5_9FIRM Length = 235 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG+ SR ELL+++ G E RTVDV IR +R + P + I T+ G Sbjct: 167 LKLLVTNPGRAFSRDELLERIWGYEYYGDTRTVDVHIRHLRAKLKDDPTVSDAIETVRGV 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFA 231 >UniRef50_C3KZU0 DNA-binding response regulator n=14 Tax=Firmicutes RepID=C3KZU0_CLOB6 Length = 235 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 37/68 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F ENP ++ ++ ++ + G E TV V +RR+R E P+ P++I T+ G Sbjct: 166 ILKLFFENPNRVFTKVQIYDSVWGEEFLSDYNTVTVHMRRLRSKIEDDPNNPKLIETVWG 225 Query: 61 EGYRFCGD 68 GY+ GD Sbjct: 226 IGYKLTGD 233 >UniRef50_A8FHC6 Response regulator n=3 Tax=Bacillus RepID=A8FHC6_BACP2 Length = 240 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 38/66 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +FC++P + S+ ++ +K+ G + TV V IR++R+ E P PE I TI G Sbjct: 168 LKYFCDHPNVVLSKDQIYEKVWGVPSYGDNNTVMVHIRKLREKIELDPSQPEYIVTIRGM 227 Query: 62 GYRFCG 67 GY+F Sbjct: 228 GYKFIP 233 >UniRef50_UPI0001C164FC Two component Transcriptional regulator, Winged helix family n=2 Tax=Nostocaceae RepID=UPI0001C164FC Length = 259 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG+ SR +L++K+ G + R VDV I ++RK E TPE I T+ G Sbjct: 187 ILHFLACHPGQAWSRPQLIQKIWGCDYVGDGRVVDVHIGQLRKKMEVDSSTPEFIKTVRG 246 Query: 61 EGYRFCGDLED 71 GY+F + Sbjct: 247 YGYKFESPEHN 257 >UniRef50_C3IWQ5 Two-component response regulator n=2 Tax=Bacillus thuringiensis RepID=C3IWQ5_BACTU Length = 214 Score = 105 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +PG+I ++ ++ + + D T+ V I R+R+ E +P P I TI G Sbjct: 141 ILTLFMGDPGRIFTKKQIFESVWSDYYCADDNTIMVHISRLREKLEDSPKNPVYIKTIRG 200 Query: 61 EGYRFCGDLE 70 GYRF E Sbjct: 201 LGYRFARKEE 210 >UniRef50_C1F3E6 Response regulator DrrA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3E6_ACIC5 Length = 232 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ SR LL + G R+VDV +RRIR+ ES P+ P + T+ G Sbjct: 163 LDYLARHPGRVFSRDHLLDAVWGDARFVTPRSVDVYVRRIREKIESDPENPRFLKTVRGA 222 Query: 62 GYRFCGD 68 GYRF Sbjct: 223 GYRFEIP 229 >UniRef50_P39663 Alkaline phosphatase synthesis transcriptional regulatory protein sphR n=34 Tax=Cyanobacteria RepID=SPHR_SYNE7 Length = 257 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 37/64 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR +LL+K+ G + +T+DV IR +R+ E+ P P + T+ G Sbjct: 193 LELFMRHPRRVWSRDQLLEKIWGIDFMGDSKTIDVHIRWLREKIEANPSNPSYLLTVRGF 252 Query: 62 GYRF 65 GYR Sbjct: 253 GYRL 256 >UniRef50_A7GKH0 Two component transcriptional regulator, winged helix family n=68 Tax=Firmicutes RepID=A7GKH0_BACCN Length = 238 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ ++ +L + + D TV V IR++RK E+ P P+ I T+ G Sbjct: 167 LKFFASNPEQVFTKTQLFRNVWDSNYIEDDNTVMVHIRKLRKKIEADPSNPKFIQTVWGI 226 Query: 62 GYRFCGD 68 GY+F G+ Sbjct: 227 GYKFVGE 233 >UniRef50_A0PXH1 Transcriptional regulatory protein n=11 Tax=Clostridium RepID=A0PXH1_CLONN Length = 232 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN GK+ ++ ++ + + D + V I +R E P I TI G Sbjct: 164 ILFYLLENKGKVFTKKQIFEYVWEEPFYGDDNAIMVHISNLRDKIEDDSKNPHYIKTIRG 223 Query: 61 EGYRFCGDL 69 GY+ ++ Sbjct: 224 LGYKLDSNI 232 >UniRef50_B8I014 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridium RepID=B8I014_CLOCE Length = 233 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +NP K+ ++ +L K + G + TV V IRR+R+ E P P I TI G Sbjct: 166 ILKLFLQNPRKVFTKNQLFKSIWGENYINDENTVMVHIRRLREKIEKDPSNPSYIQTIWG 225 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 226 IGYKLVEE 233 >UniRef50_O07130 Sensory transduction protein regX3 n=97 Tax=Actinobacteria (class) RepID=REGX3_MYCBO Length = 227 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R +L+ ++ G + +T+DV ++R+R E+ P P + T+ G Sbjct: 162 LEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGL 221 Query: 62 GYRFCG 67 GY+ G Sbjct: 222 GYKLEG 227 >UniRef50_C6XZP6 Response regulator receiver n=3 Tax=Sphingobacteriaceae RepID=C6XZP6_PEDHD Length = 233 Score = 104 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 40/67 (59%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+F NP K+ +R EL+ + G + RT+D+ I R+RK E PD P+++ T+ G Sbjct: 166 ILLYFLRNPNKVINRDELMLVVWGYNSDVNTRTLDMHIVRLRKKIELNPDNPQLLQTVRG 225 Query: 61 EGYRFCG 67 GYRF Sbjct: 226 VGYRFNP 232 >UniRef50_B8FSL6 Two component transcriptional regulator, winged helix family n=14 Tax=Bacteria RepID=B8FSL6_DESHD Length = 237 Score = 104 bits (262), Expect = 7e-22, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ENPGK R E+L + G + +T+DV IRR+R+ E P P I TI G Sbjct: 165 LKMFMENPGKALRREEMLNGIWGEDYFGDTKTLDVHIRRLREKIEDNPSDPRYIKTIWGS 224 Query: 62 GYRFCGD 68 GYR+ + Sbjct: 225 GYRWQPE 231 >UniRef50_Q67MV1 Two-component response regulator n=7 Tax=Clostridiales RepID=Q67MV1_SYMTH Length = 229 Score = 104 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG + +R ELL + G + +RTVDV +RRIR+ E P P + T G Sbjct: 162 LELLARHPGVVYTRQELLDLVWGYDFAGDERTVDVHVRRIREKLEEDPSRPRYLRTKWGV 221 Query: 62 GYRFCGDL 69 GY + Sbjct: 222 GYYLEAEP 229 >UniRef50_C1XV31 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Meiothermus RepID=C1XV31_9DEIN Length = 256 Score = 104 bits (261), Expect = 9e-22, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 38/68 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E G++ SR E+L ++ G ++ P RTVD I R+RK FE P P + T+ G Sbjct: 174 ILRLLAERAGEVVSRDEILDRVWGGDIFPSSRTVDNFIVRLRKLFEPDPAHPIYLHTVWG 233 Query: 61 EGYRFCGD 68 GYRF + Sbjct: 234 VGYRFTPE 241 >UniRef50_Q2S3D0 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3D0_SALRD Length = 253 Score = 104 bits (261), Expect = 9e-22, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 38/69 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F E+ G+ SR +LL+ + G RT+D + +RK E TPD P + T++G Sbjct: 173 ILTYFIEHRGRTVSREQLLRDVWGISGDITTRTIDRHVASLRKKIEPTPDEPAYLQTVYG 232 Query: 61 EGYRFCGDL 69 GY+F D Sbjct: 233 IGYKFVTDD 241 >UniRef50_D2BG66 DNA-binding response regulator, two-component system, OmpR family n=8 Tax=Bacteria RepID=D2BG66_DEHSV Length = 256 Score = 104 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 36/64 (56%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 +N ++ SR +LL+K+ G + RTVDV I +R+ E+ P +P + T+ G GY Sbjct: 193 FMVQNRCRVFSREQLLEKVWGYDYPGWTRTVDVHISWLRQKIEADPSSPRHLITVRGTGY 252 Query: 64 RFCG 67 +F Sbjct: 253 KFEE 256 >UniRef50_Q9F868 Sensory transduction protein regX3 n=47 Tax=Bacteria RepID=REGX3_MYCS2 Length = 228 Score = 104 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R +L+ ++ G + +T+DV ++R+R E P P + T+ G Sbjct: 163 LEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGL 222 Query: 62 GYRFCG 67 GY+ G Sbjct: 223 GYKLEG 228 >UniRef50_C8W6G9 Putative two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W6G9_DESAS Length = 277 Score = 103 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P +I +R LL + + D TV V IRR+RK E P+ P I T+ G Sbjct: 210 LWLMASHPNQIFTRNNLLTTIWEADSAGDDNTVTVHIRRLRKKIEVNPNKPRYIKTVWGV 269 Query: 62 GYRFC 66 GYRF Sbjct: 270 GYRFE 274 >UniRef50_C4L703 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillales RepID=C4L703_EXISA Length = 229 Score = 103 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP +I S+ L ++ G D TV V IRR+R+ E P P I T+ G Sbjct: 164 LACFLRNPNRILSKETLFTQVWGESFFGSDNTVMVHIRRLREKVEPNPSEPTYIKTVKGL 223 Query: 62 GYRFC 66 GYR Sbjct: 224 GYRLT 228 >UniRef50_C0Z8X3 Two-component response regulator n=3 Tax=Firmicutes RepID=C0Z8X3_BREBN Length = 240 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G++ ++A + + + G+E + + V I ++R+ E P P + TI G Sbjct: 173 ILSLLMKHAGRVFTKASIYEHVWGQEYIGDENLIMVYISKLREKIEDNPRKPVYLITIRG 232 Query: 61 EGYRFCGD 68 GYRF Sbjct: 233 LGYRFEKK 240 >UniRef50_C6LDL3 DNA-binding response regulator YycF n=2 Tax=Firmicutes RepID=C6LDL3_9FIRM Length = 237 Score = 102 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 34/67 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP + SR +L +K+ G + TV V I RIR+ E P+I+ T+ G Sbjct: 171 LKFLAMNPNIVFSREQLFEKIWGYDYVGDSVTVMVHINRIREKIEDDSKNPKILETVWGA 230 Query: 62 GYRFCGD 68 GYRF D Sbjct: 231 GYRFNKD 237 >UniRef50_B1HYB3 DNA-binding response regulator n=2 Tax=Bacillaceae RepID=B1HYB3_LYSSC Length = 233 Score = 102 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + C+N G++ S+ ++ +++ G + D TV V IR++R+ E P P I T+ G Sbjct: 165 LKYLCDNAGQVLSKEQIYERVWG-DCLFDDNTVMVHIRKLREKIEKNPGKPTCIITVRGI 223 Query: 62 GYRFCGDL 69 GY+ GD+ Sbjct: 224 GYKLVGDV 231 >UniRef50_A5UYZ0 Two component transcriptional regulator, winged helix family n=17 Tax=Bacteria RepID=A5UYZ0_ROSS1 Length = 236 Score = 102 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 39/68 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ SR +LL +++G + +RT+DV IR +R E+ P P+ I T++G Sbjct: 159 ILATLMAAPGQVFSRLDLLDRVSGDAFEGSERTIDVHIRNLRAKIEADPRHPQYIETVYG 218 Query: 61 EGYRFCGD 68 GYRF Sbjct: 219 MGYRFALP 226 >UniRef50_Q04N97 Response regulator n=6 Tax=Leptospira RepID=Q04N97_LEPBJ Length = 241 Score = 102 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PGK+ SR +L+ + G E +R +D ++RIR E PE I TI G Sbjct: 166 ILQLMAASPGKVFSREMILEAVWGMEWDGFERMIDSHVKRIRSKLEKNSAQPEWIETIWG 225 Query: 61 EGYRFCGDLED 71 GYRF + ++ Sbjct: 226 IGYRFTDNYDN 236 >UniRef50_C4L1R5 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L1R5_EXISA Length = 230 Score = 102 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +P ++ + ++ + + G D TV V I +IR+ E TP P II T+ G Sbjct: 166 ILAYFMRHPNQVLTVEQIYEAVWGEAAFEVDNTVMVHITKIREKLEDTPRKPTIIKTVWG 225 Query: 61 EGYRF 65 GYR Sbjct: 226 VGYRL 230 >UniRef50_Q892Y1 Alkaline phosphatase synthesis transcriptional regulatory protein phoP n=1 Tax=Clostridium tetani RepID=Q892Y1_CLOTE Length = 175 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 35/67 (52%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F EN K SR ELL + G + + VDV IRR+R E P P+ I T+ G Sbjct: 108 ILKIFLENEEKAFSRDELLDLVWGYDFVGDPKIVDVNIRRLRAKIEDEPSNPKYIETVWG 167 Query: 61 EGYRFCG 67 +GYR+ Sbjct: 168 KGYRWRK 174 >UniRef50_C6VLR9 Response regulator n=52 Tax=Firmicutes RepID=C6VLR9_LACPJ Length = 242 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F E G++ SR +L + G + R VD+ I +R+ E+ P P +I T+ G Sbjct: 173 LVYFVEREGRVLSRDAILNHVWGYDYASETRIVDIHISHLREKIEADPKQPRLIRTVRGF 232 Query: 62 GYRFCGD 68 GY F GD Sbjct: 233 GYEFVGD 239 >UniRef50_P94413 Uncharacterized transcriptional regulatory protein yclJ n=77 Tax=Bacilli RepID=YCLJ_BACSU Length = 227 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +NP ++ SR +LL+++ G + +RTVDV I+R+RK + + T+ G Sbjct: 163 LYYLVQNPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRKKL--ASEDKPFLYTVWGV 220 Query: 62 GYRFCGD 68 GY+F D Sbjct: 221 GYKFDED 227 >UniRef50_C4W819 Two component transcriptional regulator, winged helix family n=3 Tax=Staphylococcus RepID=C4W819_STAWA Length = 225 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N +I S+ ++ K+ G E D T+ V IR +R+ E P+ P+ I T+ G+ Sbjct: 156 LYFFISNKNQILSKEQIYSKVWGYETFVDDNTLMVHIRTLRRKIEENPNQPKFIKTMRGK 215 Query: 62 GYRFCGDLED 71 GY F G+ + Sbjct: 216 GYIFKGENHE 225 >UniRef50_P72948 OmpR subfamily n=21 Tax=Bacteria RepID=P72948_SYNY3 Length = 245 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 37/68 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ +R +L++K+ G + +R VD IRR+RK E P P I T+ G Sbjct: 178 LATFMSYPGRVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGL 237 Query: 62 GYRFCGDL 69 GY+F Sbjct: 238 GYKFEDPD 245 >UniRef50_Q03GZ5 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GZ5_PEDPA Length = 234 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N ++ SR ++L+K+ G E R VD+ I +R E+ P P++I TI G Sbjct: 165 LRYLYKNANQVLSRDQILEKVWGYEYGGQTRIVDIHISHLRDKLENDPKHPQLIKTIRGF 224 Query: 62 GYRFCGD 68 GY F Sbjct: 225 GYEFVSK 231 >UniRef50_A7ZAG8 MrsR2 n=2 Tax=Bacillus RepID=A7ZAG8_BACA2 Length = 240 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++FCE+P +I S+ ++ K + G E D TV V +RR+R+ E P P I T+ G+ Sbjct: 168 LIYFCEHPNQILSKHQIYKDVWG-EFYGGDSTVMVHVRRLREKLEEDPSRPRWIKTVRGQ 226 Query: 62 GYRFCGDL 69 GY F + Sbjct: 227 GYIFEAEP 234 >UniRef50_Q38WB3 Two component system, response regulator n=58 Tax=Firmicutes RepID=Q38WB3_LACSS Length = 246 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP ++ SR +LL+ + + +RTVD I+++R+ E P++I T+ G Sbjct: 177 LKTLAKNPRQVFSREQLLELVWDYQYFGDERTVDAHIKKLRQKIEEVG--PQVIQTVWGV 234 Query: 62 GYRFC 66 GY+F Sbjct: 235 GYKFD 239 >UniRef50_A3I5H1 DNA-binding response regulator n=2 Tax=Bacillaceae RepID=A3I5H1_9BACI Length = 235 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N ++ S+++LL + G + + T+ V IRRIR+ E P P + T+ G Sbjct: 166 LFFLAKNRNQVFSKSQLLDAVWGYDTYGDENTITVYIRRIREKIEINPSHPVYLQTVWGV 225 Query: 62 GYRFCG 67 GY+F Sbjct: 226 GYKFST 231 >UniRef50_B5Y819 DNA-binding response regulator YycF n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y819_COPPD Length = 236 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ +R LL ++ G + RT+DV I+ +R E P+ P+ I T+ G Sbjct: 166 LRILMSRAGEVLTREYLLNEIWGADYYGDKRTLDVHIKWLRDKIEPNPNEPKYILTVRGV 225 Query: 62 GYRFCGDLE 70 GY+F GD+ Sbjct: 226 GYKFNGDVR 234 >UniRef50_B0TE19 Transcriptional regulator, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TE19_HELMI Length = 234 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E P ++ + A++ + + G+E D TV V I R+R E P P+ + T+ G Sbjct: 167 LKYLAERPNRVVTIAQIYESVWGKEFIHDDNTVMVHISRLRNKIEEDPANPQRLQTVRGL 226 Query: 62 GYRFC 66 GYR Sbjct: 227 GYRLV 231 >UniRef50_Q21EC1 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=Q21EC1_SACD2 Length = 232 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 37/64 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +PG++ SR +LL + G + ++ TV+ I R+R E+ P+ + T+ G Sbjct: 167 LLYMASHPGQVFSREKLLDAVWGYQHSGYEHTVNSHINRLRTKLETDTSNPKYVLTVWGV 226 Query: 62 GYRF 65 GY+F Sbjct: 227 GYKF 230 >UniRef50_A5UPS1 Two component transcriptional regulator, winged helix family n=7 Tax=Chloroflexi RepID=A5UPS1_ROSS1 Length = 245 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G SR LL+++ G + +RT+DV +R +R+ E P P +I T+ G Sbjct: 162 LACLMHNAGVALSRDLLLERVWGSDFLGSNRTIDVHVRWLREKLEPDPANPTLIRTVRGI 221 Query: 62 GYRFCGDLED 71 GY F D Sbjct: 222 GYCFQDPATD 231 >UniRef50_B8FYB6 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfitobacterium hafniense RepID=B8FYB6_DESHD Length = 237 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +NP ++ +R ELL + G + RTVDV IRR+R S P E + T+ G Sbjct: 164 LYHLAQNPQRVFTREELLGAVWGYDYFGDQRTVDVHIRRLRTKLASLP--HEYLQTVWGV 221 Query: 62 GYRFCGDLE 70 GY+F ++ Sbjct: 222 GYKFTPPVK 230 >UniRef50_A8ZYB8 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYB8_DESOH Length = 234 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G +R LL +GR+ + DR++DV I RIRK E P P I T+ G Sbjct: 168 ILNALISHKGTPLTRDRLLDLASGRDFETFDRSIDVHISRIRKKLEDDPSAPRYIKTVWG 227 Query: 61 EGYRFCG 67 +GY + Sbjct: 228 KGYMWAE 234 >UniRef50_Q63F03 Response regulator n=15 Tax=Firmicutes RepID=Q63F03_BACCZ Length = 240 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +NP +I S+A L + + G +D + V +R +R+ E P P + T+ G Sbjct: 169 ILLFLIKNPNQIFSKARLYEAVWGETYLGNDNIMMVHMRHLREKIEDNPSKPNYLITVRG 228 Query: 61 EGYRFCGDLE 70 GY+ + Sbjct: 229 LGYKLNTKGD 238 >UniRef50_B8I272 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiaceae RepID=B8I272_CLOCE Length = 237 Score = 101 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++P + S +L + G + RTV V I +RK E P P++I TI G Sbjct: 166 ILSLLSQHPNMVFSLTQLYDHIWGVDNIGDTRTVMVHISNLRKKIEKDPANPKLIVTIKG 225 Query: 61 EGYRFCG 67 GY+ Sbjct: 226 IGYKLDT 232 >UniRef50_D2LZ20 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZ20_BACS4 Length = 236 Score = 101 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ EN + S ++ ++ G + +TV V I +R+ E P P++I T+ G Sbjct: 164 LMLLVENKNHVFSAEKIYDQIWGIDHCGDLKTVMVHISNLRRKIEENPSKPKLIKTVRGF 223 Query: 62 GYRFCGDLED 71 GY+F ED Sbjct: 224 GYKFSTADED 233 >UniRef50_C4IFN3 Transcriptional regulator n=15 Tax=Bacteria RepID=C4IFN3_CLOBU Length = 167 Score = 101 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G + ++ ++ + + D + IR++RK E PD P I TI G Sbjct: 99 ILYFLAQNQGTVFTKEQIYNAVWDEDYFLSDSNIMAFIRKLRKKIEPNPDEPIYIITIWG 158 Query: 61 EGYRFCGD 68 GY+F + Sbjct: 159 VGYKFNDN 166 >UniRef50_C8WP93 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WP93_EGGLE Length = 235 Score = 101 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 36/71 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +PG + S+ +L++ G+E ++ V I+++R+ E P P +I T+ G Sbjct: 164 IFFALASSPGLVLSKEQLVEAAWGKEFVGETSSITVFIKKLREKVEDDPSDPRVIQTVWG 223 Query: 61 EGYRFCGDLED 71 GYRF + + Sbjct: 224 IGYRFEPEGRE 234 >UniRef50_B1C9A4 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9A4_9FIRM Length = 226 Score = 101 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ EN G++ +R ELL ++ G + + RT+D+ ++ +R S D + I TI G Sbjct: 161 ILLYMLENKGRVVTREELLNEVWGYDFEGESRTLDMHMKTLRNKIGSEDDKYKYIKTIRG 220 Query: 61 EGYRF 65 GY+ Sbjct: 221 IGYKL 225 >UniRef50_UPI000050FEDE response regulator receiver protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FEDE Length = 327 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +R E+L + G + RTVDV +RR+R + I T+ Sbjct: 200 LKFFALHPERVFTRDEILLAVWGDDYFGGTRTVDVHVRRVRAKLGKDFENA--IHTVRYV 257 Query: 62 GYRFCGD 68 GYRF D Sbjct: 258 GYRFSPD 264 >UniRef50_A1HRL8 Two component transcriptional regulator, winged helix family n=2 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRL8_9FIRM Length = 231 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 42/67 (62%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR +L++K+ + ++RTVD I+ +RK ++PD P I TI+G Sbjct: 162 LELFLAHPGQVFSRLQLIEKVQDYAFEGYERTVDSHIKNLRKKLGASPDEPHYIKTIYGV 221 Query: 62 GYRFCGD 68 GY+ G+ Sbjct: 222 GYKLVGE 228 >UniRef50_B7CCF4 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B7CCF4_9FIRM Length = 233 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +NP +I S +L +K + T+ V IR +RK E P P I TI Sbjct: 167 ILSTLMKNPKQIFSAEQLYEKAWNEPYYYSANNTIMVHIRNLRKKIEKDPANPVYIKTIW 226 Query: 60 GEGYRFC 66 G+GYRF Sbjct: 227 GKGYRFE 233 >UniRef50_Q1AZL3 Two component transcriptional regulator, winged helix family n=24 Tax=Bacteria RepID=Q1AZL3_RUBXD Length = 227 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR ++L + P VDV +R +R+ P P +I T+ G Sbjct: 158 LEYLMRHPRQVLSRQQILSAVWDYAFDPGSNVVDVYVRYLRRKL-DRPGEPSLITTVRGA 216 Query: 62 GYRFCGDLED 71 GYRF E+ Sbjct: 217 GYRFDPPREE 226 >UniRef50_A1SKV6 Response regulator receiver n=7 Tax=Bacteria RepID=A1SKV6_NOCSJ Length = 232 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ SRA+LL+++ G + +R VDV IR +R P +IAT+ G Sbjct: 164 LHALVRAPGRVFSRAQLLEQVWGNDFYGDERVVDVHIRNLRAELGDDATDPHLIATVRGV 223 Query: 62 GYRFCGDLE 70 GY+F G Sbjct: 224 GYKFIGRPR 232 >UniRef50_A1Z6C8 Response regulator receiver n=1 Tax=Sulfobacillus acidophilus RepID=A1Z6C8_9FIRM Length = 229 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR LL ++ G + RTVDV + R+R+ ++ E + T+ G+ Sbjct: 159 LYFLASHPKQVFSREHLLDRVWGLDFDGDSRTVDVHVTRLRQKLLASNTPYEYLETVWGQ 218 Query: 62 GYRFCGDLE 70 GYRF Sbjct: 219 GYRFVVKAR 227 >UniRef50_C7G9Y4 DNA-binding response regulator n=6 Tax=Bacteria RepID=C7G9Y4_9FIRM Length = 167 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G + S+ ++ + V IR IR+ E P P I T+ G Sbjct: 97 ILKLLAKHSGIVFSKEQIYDIVWKESYSGDYNIVMSHIRNIREKIEDNPSKPIYIQTVWG 156 Query: 61 EGYRFCGD 68 GYRF + Sbjct: 157 VGYRFNKN 164 >UniRef50_C0D8Y6 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C0D8Y6_9CLOT Length = 243 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F N G++ ++ +L + + G + + V I +R E P +P I T+ G G Sbjct: 176 KLFISNVGRVFTKEQLYELVWG-NSIVDENAIMVYISHLRNKIEDNPKSPRYIKTVWGLG 234 Query: 63 YRFCGDLED 71 Y+F + + Sbjct: 235 YKFTVNEGE 243 >UniRef50_A9AYM0 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AYM0_HERA2 Length = 231 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 38/70 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG + SR +LL + +G+ + ++RT+DV IR +R E P P I T++G Sbjct: 160 ILATLMASPGHVFSRLDLLDRTSGQAYEGYERTIDVHIRNLRSKIEPDPKNPRYIETVYG 219 Query: 61 EGYRFCGDLE 70 GYRF Sbjct: 220 VGYRFARPKR 229 >UniRef50_A0KCT7 Two component transcriptional regulator, winged helix family n=55 Tax=cellular organisms RepID=A0KCT7_BURCH Length = 239 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PGK+ SR +LL + G + + ++ TV+ I R+R E+ P P I T+ G Sbjct: 168 LYFFARHPGKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAEPVRILTVWGR 227 Query: 62 GYRFCGDLE 70 GY+ + Sbjct: 228 GYKLAAPGQ 236 >UniRef50_B5YEK3 Response regulator DrrA n=5 Tax=Bacteria RepID=B5YEK3_DICT6 Length = 232 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 35/71 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG++ +R ++K + G R VDV IR +R+ E P P+ I T+ Sbjct: 159 ILKLLLSSPGRVWTRDMIIKHIWGENFWGEPRAVDVYIRWLREKVEDDPSHPKYIITVRN 218 Query: 61 EGYRFCGDLED 71 GY+F ED Sbjct: 219 LGYKFQEGNED 229 >UniRef50_A7Z5A0 YvrH n=28 Tax=Firmicutes RepID=A7Z5A0_BACA2 Length = 267 Score = 100 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 38/66 (57%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 +F ++P ++ S+ L + + G + D TV V IRR+R+ E+TP P+ + T+ G GY Sbjct: 201 YFLQHPNRVISKETLYQAVWGEDFFGSDNTVMVHIRRLREKIENTPSKPDFLVTVKGLGY 260 Query: 64 RFCGDL 69 +F Sbjct: 261 KFVVKD 266 >UniRef50_D0AFB3 Putative uncharacterized protein n=4 Tax=Firmicutes RepID=D0AFB3_ENTFC Length = 103 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ ++ +L + + G + P+ + IR++RK E PD P+ I T+ G Sbjct: 35 LYFMYSHKGQVFTKEQLYQNVWGDDDIPNANNMTSFIRKLRKKIEPNPDNPQYILTVWGV 94 Query: 62 GYRFCGD 68 GY+F + Sbjct: 95 GYKFSEE 101 >UniRef50_C6PZ92 Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZ92_9CLOT Length = 235 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 38/65 (58%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NP K+ +++++ + G++ +D TV V I+R+R E D+PE I+T+ G Sbjct: 169 ILKLFLLNPNKVFTKSQIYDSIWGQDALRNDNTVMVHIKRLRDKIEHDADSPEYISTVWG 228 Query: 61 EGYRF 65 GY+ Sbjct: 229 VGYKL 233 >UniRef50_B2A1Z8 Two component transcriptional regulator, winged helix family n=2 Tax=Firmicutes RepID=B2A1Z8_NATTJ Length = 233 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP ++ +R E+L+K+ G RTVD ++RIRK E +I T+ G Sbjct: 165 LYLLIKNPERVFTREEILEKIWGFSFAGGTRTVDEHVKRIRKKLEPESGFDSLIQTVWGV 224 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 225 GYKFEVKNE 233 >UniRef50_A9CWP6 Putative response regulator n=1 Tax=Shewanella benthica KT99 RepID=A9CWP6_9GAMM Length = 181 Score = 100 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++P ++ SR +LL+ + G ++ TV+ I R+R T +++ T+ G Sbjct: 109 LLFMAKHPKQVFSRMQLLEAVWGYSYSGYEHTVNSHINRLRAKLSHCASTADLVKTVWGV 168 Query: 62 GYRFCGDLE 70 GY+F + Sbjct: 169 GYKFSPPTQ 177 >UniRef50_B3QW38 Two component transcriptional regulator, winged helix family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW38_CHLT3 Length = 239 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NPG+ SR ELL + G ++ TV+ I R+R E P P+ I T+ G Sbjct: 168 LSLFMKNPGRTYSRTELLDLVWGASYSGYEHTVNSHINRLRMKIEENPAKPKYILTVWGV 227 Query: 62 GYRFC 66 GY+F Sbjct: 228 GYKFN 232 >UniRef50_A7B4Z9 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A7B4Z9_RUMGN Length = 236 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP K+ SR L +++ D TV+V + +RK + I T+ G Sbjct: 171 ILYLLIQNPQKVYSREHLYEQVWKGGYYGEDNTVNVHVSNLRKKIQKADKEESYIKTVWG 230 Query: 61 EGYRFC 66 G++ Sbjct: 231 IGFKLE 236 >UniRef50_C9YME3 Two-component response regulator n=32 Tax=Firmicutes RepID=C9YME3_CLODR Length = 247 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 39/68 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ ++ GKI ++ ++ +++ G E D + I R+RK E P +P+ I T+ G Sbjct: 180 LLYCAKHQGKILTKQQIYEEVWGEEYFYDDSNIMAIISRLRKKLEVNPSSPKYIQTVKGI 239 Query: 62 GYRFCGDL 69 GYRF ++ Sbjct: 240 GYRFNKEV 247 >UniRef50_C2E0K8 Response regulator PhoP n=9 Tax=Lactobacillus RepID=C2E0K8_9LACO Length = 238 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N G + SR +LL+K+ G +L R VD+ I +R E P+ I T G Sbjct: 174 LVYLAQNKGNVISREQLLQKIWGYDLLGSSRIVDIHISHLRDKLEDDSSHPQHILTKRGF 233 Query: 62 GYRFC 66 GYRF Sbjct: 234 GYRFI 238 >UniRef50_B4U3Y8 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=36 Tax=Bacilli RepID=B4U3Y8_STREM Length = 247 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 36/64 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ ++P +R LL+++ G + R VDV I ++R+ E P P+ I TI G Sbjct: 175 LLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLREKIEDNPKAPQYIQTIRGY 234 Query: 62 GYRF 65 GY+F Sbjct: 235 GYKF 238 >UniRef50_D1C683 Two component transcriptional regulator, winged helix family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C683_SPHTD Length = 231 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P ++ +R +L +++ G TV V I R+R+ E P P I T+ G Sbjct: 164 LQLFAEHPRQVFTREQLFQRLWGE--FGDRHTVTVHIGRLREKIEEDPANPRYIVTVWGV 221 Query: 62 GYRFCGDLE 70 GYRF G+ Sbjct: 222 GYRFDGEAR 230 >UniRef50_UPI00017F4CF5 two-component response regulator n=2 Tax=Clostridium difficile RepID=UPI00017F4CF5 Length = 124 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N +I S+ +L K+ G + D T+ V IR+IR+ E P PE I TI G Sbjct: 55 ILSLFAHNQNQIISKEKLWDKVWGEDYVGFDNTIMVHIRKIREKLEDNPSKPEYILTIKG 114 Query: 61 EGYRFCGDLE 70 GY+ + Sbjct: 115 LGYKLAVKED 124 >UniRef50_C4Z0U9 Two-component system, OmpR family, phosphate regulon response regulator OmpR n=3 Tax=Clostridiales RepID=C4Z0U9_EUBE2 Length = 238 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 37/65 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGK+ SR LLK + G++ RTVDV +RR+R+ E+ P P+ + T G Sbjct: 173 LEILAVNPGKVYSRDNLLKAVWGQDYTGDARTVDVHMRRLREKIENNPSEPKYVHTKWGV 232 Query: 62 GYRFC 66 GY F Sbjct: 233 GYYFN 237 >UniRef50_B4WRK5 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRK5_9SYNE Length = 262 Score = 99.8 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ +R++L+ K+ G + +R VD I R+RK E P P + T+ G Sbjct: 196 LATFMSYPGRVWNRSQLIDKLWGEDFFGDERVVDTHIARLRKKIEPDPSAPTFVKTVVGV 255 Query: 62 GYRFCGD 68 GYRF + Sbjct: 256 GYRFEDE 262 >UniRef50_C6CSH8 Two component transcriptional regulator, winged helix family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSH8_PAESJ Length = 240 Score = 99.8 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F +PGK+ SR EL+ + G + DR +DV I +RK E P P +I T+ G G Sbjct: 169 KLFLSHPGKVFSREELINTIRGFDSFVTDRAIDVHIVNLRKKIEQNPKEPRLIRTVWGFG 228 Query: 63 YRFCGD 68 Y++ D Sbjct: 229 YKYTTD 234 >UniRef50_P42244 Uncharacterized transcriptional regulatory protein ycbL n=84 Tax=Firmicutes RepID=YCBL_BACSU Length = 226 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 34/64 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP K+ ++ ++ + + E ++V +RR+R+ E P +P+ I T+ G Sbjct: 160 LCLFASNPKKVFTKEQIYRSVWNEEYFDDQNIINVHMRRLREKIEDDPSSPQYIKTLWGI 219 Query: 62 GYRF 65 GY+ Sbjct: 220 GYKL 223 >UniRef50_D2RD26 Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RD26_GARVA Length = 296 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ++P ++ +R LL+++ G + RTVDV IRR+R + +I T+ Sbjct: 205 LKYFVQHPRRVFTRTHLLQEVWGYDYYGGTRTVDVHIRRLRAKLGVEYEH--LIGTVRNV 262 Query: 62 GYRFCGDLED 71 GYRF D Sbjct: 263 GYRFDPSESD 272 >UniRef50_A4X1M5 Two component transcriptional regulator, winged helix family n=2 Tax=Salinispora RepID=A4X1M5_SALTO Length = 251 Score = 99.4 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + + SR +LL + T+ V I+R+RK E+ + +I T+ G Sbjct: 174 LYFFMTHADRTVSREQLLSAVWDGSTGESSNTLTVHIKRLRKRLEAEGEPQPLIITVRGL 233 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 234 GYRFTPPEQ 242 >UniRef50_A5UT44 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=A5UT44_ROSS1 Length = 261 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT--PEIIATIH 59 + +PG++ SR ELL+++ G + RTVDV + R+R E + +I+T Sbjct: 174 LHLLASHPGRVFSREELLERVWGYSYMGNTRTVDVHVNRLRHKLELAGEGSCNNMISTEW 233 Query: 60 GEGYRFCGD 68 G GY+ Sbjct: 234 GAGYKLESP 242 >UniRef50_Q0HYY3 Two component transcriptional regulator, winged helix family n=6 Tax=Shewanella RepID=Q0HYY3_SHESR Length = 253 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL + G + TV+ I R+R P + E++ T+ G Sbjct: 180 LTFLARHPQQVFSRTQLLDAVWGYRFDGFEHTVNSHINRLRGKLAHIPGSRELVQTVWGV 239 Query: 62 GYRFCGD 68 GY+F Sbjct: 240 GYKFTLP 246 >UniRef50_Q488W3 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q488W3_COLP3 Length = 260 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 35/64 (54%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 FC++P ++ SRA+LL + G ++ TV+ I R+R E P+II T+ G GY Sbjct: 186 FFCQHPDQVFSRAQLLDGVWGYHHNGYEHTVNSHINRLRSKLEEDCTEPKIIQTVWGVGY 245 Query: 64 RFCG 67 + Sbjct: 246 KLNS 249 >UniRef50_C3ALG3 Two-component response regulator n=5 Tax=Bacillales RepID=C3ALG3_BACMY Length = 238 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 33/69 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG+I ++ ++ + + D T+ V I R+R+ E P P + TI G Sbjct: 166 LKLFMGEPGRIFTKKQIFENVWSDHYYSDDNTIMVQISRLREKIEDHPRNPVYLKTIRGL 225 Query: 62 GYRFCGDLE 70 GYRF E Sbjct: 226 GYRFAKKEE 234 >UniRef50_D0MGG0 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGG0_RHOM4 Length = 246 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ +R +LL+ + RT+D I IRK E P I T++G Sbjct: 168 VLRYLIHHRGEVVTREQLLRDVWHIVGDVETRTIDRHIASIRKKIEPDLRQPRYIETVYG 227 Query: 61 EGYRFCGDLE 70 +GYR + + Sbjct: 228 KGYRLRAEDQ 237 >UniRef50_C6CSM8 Two component transcriptional regulator, winged helix family n=6 Tax=Bacillales RepID=C6CSM8_PAESJ Length = 246 Score = 99.0 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK+ SR++LL ++ TV V +RR+R+ E P P I T+ G Sbjct: 176 LHLLAMYPGKVFSRSQLLNQVWDIAFDGDTTTVTVHVRRLREKIEPNPSDPTWIKTVWGI 235 Query: 62 GYRFC 66 GY+ Sbjct: 236 GYKLD 240 >UniRef50_C6IXU0 Transcriptional regulator domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXU0_9BACL Length = 265 Score = 98.6 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E+ G + SR ELL ++ G VDV I+ +RK P I T+ G Sbjct: 200 LIKLLEHEGTVLSREELLSEVWGTTFLGGSNVVDVHIKSLRKKLGDNASRPTYITTVRGV 259 Query: 62 GYRFC 66 GYR Sbjct: 260 GYRLA 264 >UniRef50_Q3Z7C3 Transcriptional regulator, putative n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z7C3_DEHE1 Length = 238 Score = 98.6 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R LL+ + G + RTVDV IRR+R + I T+ G Sbjct: 169 LKYLASNRGRVYTRESLLETIWGFDYYGGTRTVDVHIRRLRSKIGD--FNEKYIKTVRGV 226 Query: 62 GYRFCG 67 GY F Sbjct: 227 GYTFRA 232 >UniRef50_C9KN64 DNA-binding response regulator VicR n=2 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN64_9FIRM Length = 233 Score = 98.6 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+P + SR L +++ G E TV V I RIR+ E P P + TI G Sbjct: 164 LAFLAEHPNIVFSREALFERVWGAEALGDSATVMVHINRIREKIEEDPAHPRYLETIRGA 223 Query: 62 GYRFC 66 GYRF Sbjct: 224 GYRFR 228 >UniRef50_Q7NGM9 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NGM9_GLOVI Length = 229 Score = 98.6 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G+ R ++ +++ G + +RT+D I R+R E P P I T+HG Sbjct: 160 VLECLFRSAGQTVDREKIYQEVWGYDTAVTNRTIDFHIARLRSKLEDNPKEPRYILTVHG 219 Query: 61 EGYRFCGDL 69 GYRF Sbjct: 220 SGYRFVVPE 228 >UniRef50_Q97MA9 Response regulator (CheY domain, HTH domain) n=1 Tax=Clostridium acetobutylicum RepID=Q97MA9_CLOAB Length = 235 Score = 98.6 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 34/64 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + EN I S+ +++ + + +D T+ V IR++R+ E P P+ I T+ G Sbjct: 170 LKYLVENKNIILSKEKIVNAVWEDDYVGYDNTIMVHIRKLRQKLEDDPSNPKYILTVKGL 229 Query: 62 GYRF 65 GY+ Sbjct: 230 GYKL 233 >UniRef50_UPI0001692EE0 response regulator n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692EE0 Length = 230 Score = 98.2 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP + EL +K+ + RT+ V + +RK E P P+ I T+ G Sbjct: 165 LSLLASNPNHVFRIEELFEKVWSVDSLGDPRTLIVHVSNLRKKIEPNPADPKYIITVRGV 224 Query: 62 GYRFCG 67 GY+F G Sbjct: 225 GYKFNG 230 >UniRef50_A9KR75 Two component transcriptional regulator, winged helix family n=64 Tax=Firmicutes RepID=A9KR75_CLOPH Length = 238 Score = 98.2 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +P ++ +R +LL + G E RTVDV I+R+R+ + ++T+ G G Sbjct: 173 YFLASHPNQVFTREQLLDHIWGYEYIGDTRTVDVHIKRLREKIKDHIS--WRLSTVWGIG 230 Query: 63 YRFC 66 Y+F Sbjct: 231 YKFE 234 >UniRef50_A0LVZ4 Two component transcriptional regulator, winged helix family n=13 Tax=Actinomycetales RepID=A0LVZ4_ACIC1 Length = 245 Score = 98.2 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ SR +LL+++ G + R VDV +RR+R E P P I+ T+ G Sbjct: 178 LCELASAPDRVYSREQLLERVWGYDYFGDGRIVDVHVRRLRTKIEEDPAHPRILVTVRGL 237 Query: 62 GYRFCG 67 GY+ Sbjct: 238 GYKIQP 243 >UniRef50_Q67RH7 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67RH7_SYMTH Length = 231 Score = 98.2 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG +R LL ++ + TV V IRR+R+ E P P I T+ G Sbjct: 162 LWLMASHPGHPFTRESLLARVWHGDAPTDQSTVTVCIRRLREKIEDNPAQPRWIKTVWGI 221 Query: 62 GYRFCG 67 GY+F Sbjct: 222 GYKFDP 227 >UniRef50_A9AWM9 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWM9_HERA2 Length = 232 Score = 98.2 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R LL ++ G + RTVDV IRR+R +I T G Sbjct: 166 LAYLASHPGQVFTREVLLGQVWGYDEYVDARTVDVHIRRLRSKLSEIDAESNLIQTEWGI 225 Query: 62 GYRFCG 67 GYRF Sbjct: 226 GYRFIE 231 >UniRef50_C0QG14 Response regulator, CheY-like receiver domain protein n=4 Tax=Bacteria RepID=C0QG14_DESAH Length = 247 Score = 98.2 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + P ++ SR +LL + GR DR+VDV I +R+ P P I T+ Sbjct: 176 LLTLAKFPARVLSRDQLLDAVAGRSYDVFDRSVDVHISSLRRKLGEDPRNPRFIQTVRTV 235 Query: 62 GYRFCGDL 69 GY F Sbjct: 236 GYMFNDPD 243 >UniRef50_C6LD48 DNA-binding response regulator ResD n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LD48_9FIRM Length = 238 Score = 98.2 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ +R +LL + G + RT+DV I+RIR+ + + T+ G Sbjct: 170 LYFLASSPNQVFTREQLLDHIWGYDYIGDARTIDVHIKRIREKIKDH--ETWSLDTVWGV 227 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 228 GYKFRTAEE 236 >UniRef50_B4WME0 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WME0_9SYNE Length = 236 Score = 98.2 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R ++L+ + G + P VDV I+R+RK I ++ G Sbjct: 170 LEYLMRSPGRVFTRTQMLEHVWGYDFNPSTNVVDVCIQRLRKKI-DMKGNERWIESVRGV 228 Query: 62 GYRFC 66 GYRF Sbjct: 229 GYRFR 233 >UniRef50_Q5WGW1 Two-component response regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WGW1_BACSK Length = 228 Score = 98.2 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +PG++ ++ EL + + RTV V ++ +R + P+ I T+ G Sbjct: 160 LLFLANHPGRVFTKEELYAAVWNGDGF-DSRTVTVHVKNVRHKLKDGTKHPKYIETVWGV 218 Query: 62 GYRFCG 67 GY+F G Sbjct: 219 GYKFIG 224 >UniRef50_Q1AYG8 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYG8_RUBXD Length = 229 Score = 97.8 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ R LL+++ G + +RTV+V ++R+R P P++I T+ G Sbjct: 161 LYTLARSPGRVFPRGTLLRQVWGEDEYIDERTVNVYVQRLRNKLGDDPSDPKLIETVRGF 220 Query: 62 GYRFCGDL 69 GYR Sbjct: 221 GYRLVRPE 228 >UniRef50_C6CZ95 Two component transcriptional regulator, winged helix family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ95_PAESJ Length = 238 Score = 97.8 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L C++ GK+ SR +LL + R VDV I +R E TPE I T+ Sbjct: 164 LLFLCKHRGKVLSRQQLLHGVWDYHFLGDTRIVDVHISHLRDKIEQNARTPEYIMTVRNV 223 Query: 62 GYRFCGD 68 GY+ Sbjct: 224 GYKLHAP 230 >UniRef50_A0Y0H8 DNA-binding response regulator n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y0H8_9GAMM Length = 241 Score = 97.8 bits (244), Expect = 8e-20, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F +P + SR +LL K+ G + ++ TV+ I R+R E TP II T+ G Sbjct: 173 LVYFARHPNHVFSRQQLLDKVWGYQHSGYEHTVNSHINRLRAKLELHQSTP-IIETVWGV 231 Query: 62 GYRFCG 67 GY+ Sbjct: 232 GYKLNP 237 >UniRef50_C5CFK4 Two component transcriptional regulator, winged helix family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CFK4_KOSOT Length = 226 Score = 97.8 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENPGK+ +R E+L ++ G + RTVDV I ++R+ E I T+ G Sbjct: 160 LKLMIENPGKVFNRQEILDRVWGMDFFGDFRTVDVHISKLREKIG-----SEFIKTVRGV 214 Query: 62 GYRFCGDLED 71 GY+ ++ Sbjct: 215 GYKLVIPEDE 224 >UniRef50_B1JFX2 Two component transcriptional regulator, winged helix family n=30 Tax=Bacteria RepID=B1JFX2_YERPY Length = 235 Score = 97.8 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + ++ G++ +R L + G + P RT+D I ++RK E P P +I T+HG Sbjct: 162 ILRYLYQHKGRVITRDMLFDAVWGYDHLPQSRTLDQHISKLRKTIELDPVHPVLIRTVHG 221 Query: 61 EGYR 64 GYR Sbjct: 222 AGYR 225 >UniRef50_Q5WBT6 Two-component response regulator n=3 Tax=Bacillaceae RepID=Q5WBT6_BACSK Length = 238 Score = 97.8 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + FCENP +I + A+L +++ G ++ ++TV + I ++RK P+II + G Sbjct: 165 LHFFCENPNRIFTTAQLYERVWGNDVFGEEKTVTIHISKLRKKLGDDTRKPKIIVNLRGI 224 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 225 GYKFIPPNE 233 >UniRef50_D1CH01 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CH01_THET1 Length = 238 Score = 97.8 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 31/70 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ +++++ G + + V IRR+R P+ P I T G Sbjct: 163 LELLVRHAGQVLPHDLIMERVWGPTYVGDHQLLKVFIRRLRHKLGDDPEQPRYIQTEWGM 222 Query: 62 GYRFCGDLED 71 GYRF G + Sbjct: 223 GYRFVGQSAE 232 >UniRef50_P45606 Phosphate regulon transcriptional regulatory protein phoB n=201 Tax=Proteobacteria RepID=PHOB_SHIDY Length = 229 Score = 97.8 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR +LL + G + DRTVDV IRR+RK E ++ T+ G Sbjct: 163 LHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEP-GGHDRMVQTVRGT 221 Query: 62 GYRFCG 67 GYRF Sbjct: 222 GYRFST 227 >UniRef50_C8WVL8 Two component transcriptional regulator, winged helix family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WVL8_ALIAD Length = 233 Score = 97.8 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 40/67 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +P ++ SR EL++++ G + + RT+D ++ +R E P +P I T++G Sbjct: 165 LVILSRHPRRVFSREELIERVFGMDFRGDVRTIDAHVKNLRAKIEDDPKSPVYIQTVYGM 224 Query: 62 GYRFCGD 68 GYRF GD Sbjct: 225 GYRFGGD 231 >UniRef50_B0MRC9 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRC9_9FIRM Length = 222 Score = 97.4 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ EN G+I ++ L ++ G + +T+ V I+R+R+ E P P+ I T+ G Sbjct: 156 LVLLIENKGRILTKEYLFNQIWGSDSFSEQQTLTVHIKRLRQKIEDDPKNPKHIQTVWGV 215 Query: 62 GYRFCG 67 GY++ Sbjct: 216 GYKYES 221 >UniRef50_B2A0K7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B2A0K7_NATTJ Length = 246 Score = 97.4 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 35/64 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G++ +R +LL+K+ G + RTVDV IR +R+ P+++ T+ G Sbjct: 179 LNIMVTNSGQVLTREKLLEKIWGYDFLGDTRTVDVHIRHLRQKISEAGGPPDLVETVRGI 238 Query: 62 GYRF 65 GYR Sbjct: 239 GYRL 242 >UniRef50_D0WFD8 DNA-binding response regulator VicR n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WFD8_9ACTN Length = 242 Score = 97.4 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+PG + S+ +L + G+E T+ V ++++R E P P II T+ G Sbjct: 168 IIRTLMEHPGVVFSKNQLTEAGWGKEFVGETTTITVFMKKLRSKVEDDPTDPRIIETVWG 227 Query: 61 EGYRFCGD 68 GYR D Sbjct: 228 VGYRLDAD 235 >UniRef50_A8VSS8 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VSS8_9BACI Length = 229 Score = 97.4 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LHF ++P ++ + +L ++ + + TV V I +R+ E TP+ PE I T+ G Sbjct: 161 LLHFAKHPNQVWTHEQLYDRIWNLDATGYVETVKVHISHLRRKIERTPNRPEYIQTVRGF 220 Query: 62 GYRFCG 67 GYRF Sbjct: 221 GYRFVP 226 >UniRef50_A9BR19 Two component transcriptional regulator, winged helix family n=30 Tax=cellular organisms RepID=A9BR19_DELAS Length = 252 Score = 97.4 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 41/69 (59%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E G++ +R ++++ + GREL+ DR++DV + RIR E+ P P+ I T+ G Sbjct: 184 LVTLAERAGRVLTRDQIMEAVRGRELEAFDRSIDVHMGRIRAAIEADPKAPKRILTVRGV 243 Query: 62 GYRFCGDLE 70 GY F + Sbjct: 244 GYVFAKQQD 252 >UniRef50_A9AXY0 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXY0_HERA2 Length = 225 Score = 97.4 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P +I SR +LL+ + + DR++D I R+R+ E P+ I T++G Sbjct: 160 LATFMRHPNQILSREQLLEAVFAGDYAGFDRSLDAHIARLRQRIEHDRTNPQYIVTVYGL 219 Query: 62 GYRFC 66 GY+F Sbjct: 220 GYKFV 224 >UniRef50_D1YA87 Transcriptional regulatory protein, C-terminal domain protein n=2 Tax=Propionibacterium acnes RepID=D1YA87_PROAC Length = 237 Score = 97.4 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R LL + G + RTVDV IRR+R P+ I T+ Sbjct: 172 LKYLVGHPGRVLTRDLLLSDVWGYDYYGGTRTVDVHIRRLRAKVG--PEYEGHIQTVRSV 229 Query: 62 GYRFCGD 68 GYRF + Sbjct: 230 GYRFQAE 236 >UniRef50_B0MNE2 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0MNE2_9FIRM Length = 232 Score = 97.4 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 33/61 (54%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 N ++ SR ELL K+ G + RT+D+ I +RK + +I T+ G GYRF G Sbjct: 172 NRARVVSREELLTKVWGIDFVGETRTLDMHIGTLRKKLSDDAENAHLIKTVRGVGYRFIG 231 Query: 68 D 68 + Sbjct: 232 E 232 >UniRef50_B8G223 Two component transcriptional regulator, winged helix family n=11 Tax=Clostridia RepID=B8G223_DESHD Length = 234 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 33/64 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+P ++ +R +L M E T+ V IR++R+ E P P+ I T+ G Sbjct: 169 LTFMAEHPDQVFTREQLFAHMWRDEYVNDTSTITVFIRKLREKIERDPAKPQYIQTVWGI 228 Query: 62 GYRF 65 GY+F Sbjct: 229 GYKF 232 >UniRef50_C7N7D7 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=17 Tax=Bacteria RepID=C7N7D7_SLAHD Length = 232 Score = 97.1 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFEST-PDTPEIIATIHG 60 + ENPG+ +R++LLK + RTVD I+ +R+ P I TI G Sbjct: 164 LRKLMENPGRAFTRSQLLKDVWDVSFVGETRTVDTHIQTLRRKLNDAYPGAGNAIETIRG 223 Query: 61 EGYRFCGD 68 GYRF + Sbjct: 224 VGYRFSKE 231 >UniRef50_Q2JED0 Two component transcriptional regulator, winged helix family n=72 Tax=Bacteria RepID=Q2JED0_FRASC Length = 321 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+ +R ELL+ + G TV V IRR+R+ E P P ++ T+ G Sbjct: 216 LAFLLRRPGRAFTRGELLEHVWGWSY-GDPSTVTVHIRRLREKIEDDPTAPRMLVTVWGV 274 Query: 62 GYRFCG 67 GYR+ Sbjct: 275 GYRYDP 280 >UniRef50_C8PCG6 DNA-binding response regulator n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PCG6_9LACO Length = 238 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHD-RTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN + SR +LL + E + + R VD+ I +R E+ P P++I T+ G Sbjct: 169 LKFLFENQNHVLSREQLLDGVWEYEDEYNTTRIVDMHISNLRDKIEADPANPQLIKTVRG 228 Query: 61 EGYRFCGD 68 GY Sbjct: 229 LGYMLKLP 236 >UniRef50_A8MLN3 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiaceae RepID=A8MLN3_ALKOO Length = 231 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F ENPG++ ++ +L + + D + V I ++RK E +P+ I T+ G G Sbjct: 168 KFFMENPGQVFTKEQLYENIWN-NSIIDDNAIMVYIHQLRKKLEDNVKSPKHIVTVWGIG 226 Query: 63 YRFCG 67 Y+F Sbjct: 227 YKFIA 231 >UniRef50_A8MFP9 Two component transcriptional regulator, winged helix family n=16 Tax=Bacteria RepID=A8MFP9_ALKOO Length = 231 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+P K+ ++A L +++ E D TV+V I +R E I T+ G Sbjct: 165 ILELLMEHPKKVFTKANLFEQVWNDEFLGDDNTVNVHISNLRSKLAKADPATEYIHTVWG 224 Query: 61 EGYRFCG 67 G++ Sbjct: 225 IGFKMNE 231 >UniRef50_Q01RV3 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q01RV3_SOLUE Length = 235 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NP + +R +L + G E P+ RTVD + ++R+ E P+TP+ T+HG Sbjct: 170 LTYFLHNPDRPLTRDMILNSVWGYEFFPNTRTVDAHVVKLRQKLEPDPNTPKHFLTVHGV 229 Query: 62 GYRFCG 67 GYRF Sbjct: 230 GYRFIP 235 >UniRef50_C5D1A0 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=C5D1A0_VARPS Length = 248 Score = 97.1 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 42/68 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR LL++ GRE P DRT+DV + R+RK E+ PD P+I+ ++ G Sbjct: 178 LCAFARHPGRVLSRDFLLEQTRGREASPFDRTIDVQVGRLRKKIEADPDEPQIVKSVRGA 237 Query: 62 GYRFCGDL 69 GY + Sbjct: 238 GYILVPPV 245 >UniRef50_C7M2G6 Putative two component transcriptional regulator, winged helix family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2G6_ACIFD Length = 217 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ SR LL ++ G E RTVDV +RR+R + +I T+ Sbjct: 153 LKFLASHPGKVFSRETLLSRVWGYEYYGGARTVDVHVRRLRAKLGEAHEH--LIHTVRSV 210 Query: 62 GYRF 65 GYRF Sbjct: 211 GYRF 214 >UniRef50_A6LVN5 Two component transcriptional regulator, winged helix family n=3 Tax=Firmicutes RepID=A6LVN5_CLOB8 Length = 228 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + S ++ +K+ G D TV V IR+IR+ E P+ P I T+ G Sbjct: 164 ILELLASNKGIVFSIEKIYEKIWGDVFFESDNTVMVHIRKIREKIEEEPENPRYIRTVWG 223 Query: 61 EGYR 64 GYR Sbjct: 224 VGYR 227 >UniRef50_C6PCZ0 Two component transcriptional regulator, winged helix family n=4 Tax=Clostridia RepID=C6PCZ0_CLOTS Length = 231 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG++ S+ ++ +K+ G + + TV I+ IR E+ E I T+ G Sbjct: 163 VLELLSLHPGQVFSKEQIYEKVWGFDAEGDTTTVTEHIKNIRAKIENLDPDTEYIKTVWG 222 Query: 61 EGYRFCG 67 GY++ Sbjct: 223 IGYKWEK 229 >UniRef50_UPI0001C425A1 two component transcriptional regulator, winged helix family protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C425A1 Length = 233 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P ++ +R +LL ++ G + RT+DV I+RIR+ I TI G Sbjct: 165 LYYLASYPNQVFTRQQLLDQIWGYAFEGDPRTIDVHIKRIREKLTEADAKWT-IKTIRGV 223 Query: 62 GYRFCGDLED 71 GY+F + Sbjct: 224 GYKFLEKEHE 233 >UniRef50_D1CA41 Two component transcriptional regulator, winged helix family n=3 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CA41_SPHTD Length = 310 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H ++ G SR L+++ G + VDV IRR+R+ E P +P + T+ G Sbjct: 163 ILAHLMQSSGTPVSRKRLIERTWGVDFLHESNRVDVYIRRLREKIEPEPSSPIYVRTVRG 222 Query: 61 EGYRFCGDLE 70 GY FC + Sbjct: 223 VGYVFCPPEK 232 >UniRef50_A9VV65 Two component transcriptional regulator, winged helix family n=24 Tax=Bacillus RepID=A9VV65_BACWK Length = 236 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++P ++ SR++LL+ + + TV V + R+R+ E I T+ G Sbjct: 164 VLYVMAKHPKQVFSRSQLLELIWDFGHEGASNTVTVLVSRLREKLEKHTIKNHWIHTVWG 223 Query: 61 EGYRFCGDLED 71 GYRF + + Sbjct: 224 IGYRFEPNGRN 234 >UniRef50_A1SN97 Response regulator receiver n=41 Tax=Bacteria RepID=A1SN97_NOCSJ Length = 297 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E P + SR +L+ ++ G + + VDV I +R+ + + + T+ G Sbjct: 229 LATLAERPRLVFSRRQLIDRVWGEDWVGDEHLVDVHIGHLRRKLDDDASRGQYLRTVRGV 288 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 289 GYRMGTGEE 297 >UniRef50_Q01T10 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01T10_SOLUE Length = 237 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG + SR +LL + G++ DR VDV + R+R+ E P +P +I ++ G Sbjct: 165 LEFLMNRPGVVFSREQLLNAVWGQDRAITDRAVDVYVLRLRQKVEKDPASPILIHSVRGF 224 Query: 62 GYRFCG 67 GY F Sbjct: 225 GYTFEP 230 >UniRef50_Q67J79 Two-component response regulator, CheY-like n=1 Tax=Symbiobacterium thermophilum RepID=Q67J79_SYMTH Length = 232 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR +LL ++ G + + RTVD I+ +R +I T+ G Sbjct: 164 LALLAAHPGQVFSREKLLDRIWGPDFQGDARTVDAHIKNLRDKLGEGAG---LILTVWGV 220 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 221 GYRFAEVPD 229 >UniRef50_C2W6L0 Two-component response regulator n=5 Tax=Firmicutes RepID=C2W6L0_BACCE Length = 250 Score = 96.7 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C +P +I + +L +++ G D+TV + I ++RK E P P I + G Sbjct: 180 LTFLCTHPNRIFTAEQLYEQVWGLTSIGDDKTVVMHISKLRKKIEENPKLPTYIVNLRGI 239 Query: 62 GYRFCGDLED 71 GY+F ++ Sbjct: 240 GYKFIPHTKE 249 >UniRef50_B2V3E9 Transcriptional regulatory protein ResD n=5 Tax=Clostridiales RepID=B2V3E9_CLOBA Length = 233 Score = 96.3 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ SR E+L K+ G + R VD I+RIRK + I T++G Sbjct: 166 ILYLLATNEGRVLSREEILDKVWGYDYFGDTRVVDTQIKRIRKKIPEEGEKWS-IKTVYG 224 Query: 61 EGYRFC 66 GY+F Sbjct: 225 IGYKFE 230 >UniRef50_A6LQJ3 Two component transcriptional regulator, winged helix family n=4 Tax=Clostridium RepID=A6LQJ3_CLOB8 Length = 231 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 28/66 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK+ ++ ++ +++ + V + IR+ E P P I TI G Sbjct: 159 ILKLLVSNLGKVFTKKQIYEEVWEEAYFGDSNNIMVHLSHIREKIEDDPKNPIYIKTIRG 218 Query: 61 EGYRFC 66 GY+ Sbjct: 219 IGYKIE 224 >UniRef50_Q0AWC5 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWC5_SYNWW Length = 227 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (56%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ENPG++ SR +L+++ G + ++RT+D I +R E+T + I T++G Sbjct: 159 ILLLLAENPGQVFSRLHILERVFGDIYEGYERTIDTHISNLRHKIEATGKSEISIKTVYG 218 Query: 61 EGYRFCGDL 69 GY+ + Sbjct: 219 IGYKLVAEE 227 >UniRef50_B6FPY5 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPY5_9CLOT Length = 114 Score = 96.3 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ + ++ + + G+E + V I IRK E P P I T+ G Sbjct: 46 ILFFLASYPGQVFTHRQIYETVWGKEYFCDEGNVTAHIGHIRKKIELDPRNPVFIQTVRG 105 Query: 61 EGYRFC 66 GY+F Sbjct: 106 IGYKFA 111 >UniRef50_A6X2C4 Two component transcriptional regulator, winged helix family n=59 Tax=cellular organisms RepID=A6X2C4_OCHA4 Length = 255 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G++ +R LL+ + P +DV I R+R E ++ T+ G Sbjct: 179 LEYLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIEK-GFDGPLLHTVRGA 237 Query: 62 GYRFCG 67 GY Sbjct: 238 GYMLKA 243 >UniRef50_B5JD22 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JD22_9BACT Length = 239 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R ++L+ + G + P VDV ++R+RK +I T+ G Sbjct: 174 LEYLMRSPGRVLTRTQILEHVWGYDFDPSTNVVDVCVQRLRKKV-DAGHDVHLIETVRGA 232 Query: 62 GYRFCGD 68 GYR + Sbjct: 233 GYRMRKE 239 >UniRef50_C0GHG5 Two component transcriptional regulator, winged helix family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHG5_9FIRM Length = 237 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L N G+ R +LL+++ G E RT+D I+R+R+ + T+ G Sbjct: 167 LLILARNAGRTLKREQLLEQVWGYEYPGSTRTIDEHIKRLRQKISQLEPGYTFVQTVWGV 226 Query: 62 GYRFCGDLED 71 GY+ D Sbjct: 227 GYKLEVKEND 236 >UniRef50_UPI0001C421AD two-component response regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C421AD Length = 246 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E PG++ S+ +L ++ ++ RTV V I+ +R+ P I T+ G Sbjct: 175 LLTLAEAPGQVFSKEQLYNRVWKQDDADDIRTVTVHIKNVRRKLGDGSKHPRFIDTVWGI 234 Query: 62 GYRFCGDLED 71 GY+F G + Sbjct: 235 GYKFIGQKHE 244 >UniRef50_A5V0J0 Two component transcriptional regulator, winged helix family n=7 Tax=Chloroflexaceae RepID=A5V0J0_ROSS1 Length = 229 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G++ S +++L K+ G + + V V IRR+R E D P I T+ Sbjct: 161 LYYLMQNTGRVLSASQILSKVWGYDYEGESNLVAVYIRRLRAKIEPDIDAPRYIITVRNL 220 Query: 62 GYRFCGDLE 70 GY+F Sbjct: 221 GYKFVVQDR 229 >UniRef50_Q897D5 Two-component response regulator n=8 Tax=Clostridiales RepID=Q897D5_CLOTE Length = 233 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + S ++ +++ E D TV V IR++R+ E P P+ + T+ G Sbjct: 166 ILELLARNKGIVFSIEKIYERVWKEEFFKSDNTVMVHIRKLREKIEENPRKPKYVKTVWG 225 Query: 61 EGYR 64 GY+ Sbjct: 226 VGYK 229 >UniRef50_C0W5Y5 Response regulator n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W5Y5_9ACTO Length = 223 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +R LL ++ G + RTVDV +RR+R + +I T+ Sbjct: 157 LKYLAANQGRVLTRETLLDEVWGEDYIGGSRTVDVHVRRLRAKLG--TEHDHLIGTVRNV 214 Query: 62 GYRFCGDLE 70 GYR +E Sbjct: 215 GYRLDALVE 223 >UniRef50_Q067N9 Two component transcriptional regulator, winged helix family protein n=1 Tax=Synechococcus sp. BL107 RepID=Q067N9_9SYNE Length = 234 Score = 95.9 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 39/64 (60%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ SR +L+ ++ G + +TVDV IR +R+ E+ P P ++T+ G Sbjct: 170 LELFIQNPKRVWSRDDLIDQIWGVDYIGDRKTVDVHIRWLREKIEANPSDPTKLSTVRGF 229 Query: 62 GYRF 65 GYRF Sbjct: 230 GYRF 233 >UniRef50_UPI00017890B9 putative two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017890B9 Length = 272 Score = 95.9 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ ++ G + +R +L+ K+ + VDV I+ +RK P IAT+ G Sbjct: 207 LMLLLDSEGAVCTREDLMCKIWDTDFMGGSNVVDVHIKSLRKKLNDNAGAPRYIATVRGV 266 Query: 62 GYRFC 66 GYR Sbjct: 267 GYRLA 271 >UniRef50_B1XM84 Two-component response regulator n=8 Tax=Cyanobacteria RepID=B1XM84_SYNP2 Length = 241 Score = 95.9 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ +R ++L+ + G E + ++V IR +R E+ +I T+ G Sbjct: 175 LKYLMSHPQQVLTREQILENVWGNEFQGESNVIEVYIRYLRLKIEAKGQK-RLIQTVRGV 233 Query: 62 GYRFCGDL 69 GY D Sbjct: 234 GYVLKKDP 241 >UniRef50_C7ILM1 Two component transcriptional regulator, winged helix family n=3 Tax=Firmicutes RepID=C7ILM1_9CLOT Length = 232 Score = 95.9 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 40/68 (58%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P KI +R ELL+ + G + R+VD+TI R+RK E +TP+ + TI+G Sbjct: 163 ILETLFKRPKKIFTRDELLEIVWGYDYSGDSRSVDMTIMRLRKKIEEDSETPKYVKTIYG 222 Query: 61 EGYRFCGD 68 GY+ GD Sbjct: 223 FGYQLGGD 230 >UniRef50_B0S1J7 Two-component response regulator n=16 Tax=Clostridia RepID=B0S1J7_FINM2 Length = 239 Score = 95.5 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP KI +R E+++ G + + DR +D I+ IR E P P I TI+G Sbjct: 169 IIKTLFSNPNKIFTRDEIIELSFGYDYEAFDRAIDTHIKNIRHKIEDNPKKPRYIKTIYG 228 Query: 61 EGYRF 65 GY+ Sbjct: 229 VGYKL 233 >UniRef50_Q02A31 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q02A31_SOLUE Length = 231 Score = 95.5 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G+ +R +LL ++ G RTVDV + +R+ E P P + T+ G Sbjct: 163 LGYLIDHCGETVTREDLLTQVWGYSATTDTRTVDVHVAWLRQKLEENPKYPRYLQTVRGL 222 Query: 62 GYRFCGDL 69 GY+ + Sbjct: 223 GYKLSDEE 230 >UniRef50_C2EBW1 Two-component response regulator n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EBW1_9LACO Length = 247 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G++ SR +LL+ + G ++ R VD+ I +R E+ P+TP I T G Sbjct: 176 LDYLAKHCGQVLSREQLLQGVWGYDILGTSRIVDIHISHLRDKLEADPNTPLWIKTNRGF 235 Query: 62 GYRFCGDLE 70 GY F G ++ Sbjct: 236 GYSFSGKIK 244 >UniRef50_A9KHT5 Two component transcriptional regulator, winged helix family n=12 Tax=Bacteria RepID=A9KHT5_CLOPH Length = 233 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 NP K+ +R LL + G + RTVD I+R+R + I TI G G Sbjct: 164 WTLASNPNKVFTRDNLLDSLWGFDYFGDSRTVDSHIKRLRAKLDMLEHPNWSIKTIWGVG 223 Query: 63 YRFCGDLE 70 Y+F D + Sbjct: 224 YKFEVDED 231 >UniRef50_C4G2P7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2P7_ABIDE Length = 257 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG++ S ++ ++ + + TV V IRR+R+ E +II T+ G Sbjct: 191 ILCLLASNPGRVFSTDDIFTRVWNEKAFEGNNTVMVHIRRLREKIEMDARNAKIIKTVWG 250 Query: 61 EGYRFCG 67 GY+ Sbjct: 251 VGYKIEK 257 >UniRef50_C6D5Y8 Putative two component transcriptional regulator, winged helix family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5Y8_PAESJ Length = 255 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + G + +R + + G + VDV I+ +R+ + + P IAT+ G Sbjct: 186 LLMFLTSDGAVLTREAMFDAVWGSQYFGGSNVVDVHIKTLRRKLKDSAVAPHYIATVRGV 245 Query: 62 GYRFCGD 68 GYR + Sbjct: 246 GYRLVEE 252 >UniRef50_C7N0N0 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=42 Tax=Bacteria RepID=C7N0N0_SLAHD Length = 240 Score = 95.5 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 38/67 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ SR EL++K+ G + + ++RT+D ++ +R P P+ + T+HG Sbjct: 168 LTTLSRYPGRVYSRMELVEKVLGYDFEGYERTIDSHVKNLRAKIGDNPRNPKWLHTVHGV 227 Query: 62 GYRFCGD 68 GYRF Sbjct: 228 GYRFEDP 234 >UniRef50_C7MNN6 Response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MNN6_CRYCD Length = 236 Score = 95.1 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ SR LL+++ G + RTVDV +RR+R + T+ G Sbjct: 173 LAFLAAHPGRTFSRDALLQRVWGFDYYGGSRTVDVHVRRVRSKLGPDLAH--HLETVRGV 230 Query: 62 GYRF 65 GY + Sbjct: 231 GYLW 234 >UniRef50_A9BP99 Two component transcriptional regulator, winged helix family n=60 Tax=Proteobacteria RepID=A9BP99_DELAS Length = 262 Score = 95.1 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ +I +R LL+ + P +DV I R+R P +I T+ G Sbjct: 189 LAFLMQHAHQIVTRTMLLESVWDYRFDPQTNVIDVHISRLRGKV-DKGFEPALIHTVRGV 247 Query: 62 GYRFCGDLED 71 GY +D Sbjct: 248 GYSLSDRPQD 257 >UniRef50_C7N7W6 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N7W6_SLAHD Length = 224 Score = 95.1 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+I SR LL ++ G + RTVDV +RR+R P+ + I T+ G Sbjct: 161 LSFLATHPGRIYSREVLLSQVWGFDYYGGSRTVDVHVRRLRAKLG--PEVAQHIETVRGA 218 Query: 62 GYRFC 66 GY + Sbjct: 219 GYLWN 223 >UniRef50_B0TDB2 Two-component response regulator n=3 Tax=Bacteria RepID=B0TDB2_HELMI Length = 235 Score = 95.1 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P ++ + EL ++ G + RTV I IRK ++ P PE I I G Sbjct: 170 LFFLAQHPNQVFTAQELYTRIWGYKDIGDYRTVMTHISNIRKKIKTDPSAPERIQNIRGF 229 Query: 62 GYRFC 66 GY+F Sbjct: 230 GYKFN 234 >UniRef50_A7WWQ5 Transcriptional regulatory protein walR n=685 Tax=Bacteria RepID=WALR_STAA1 Length = 233 Score = 95.1 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 35/63 (55%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + ++ G++ +R LL+ + G + RTVDVTIRR+R+ E P PE I T G G Sbjct: 167 HYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVG 226 Query: 63 YRF 65 Y Sbjct: 227 YFL 229 >UniRef50_Q0RNB1 Putative response regulator (Response regulator protein) (Partial match) n=1 Tax=Frankia alni ACN14a RepID=Q0RNB1_FRAAA Length = 309 Score = 95.1 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ +R +LL+++ G R +DV +RR+R+ E+ P P I T+ G Sbjct: 184 LCELAVAGGRAVTRKQLLERIWGYNYFGGARMLDVHVRRLRRKVEADPSAPTHILTVRGI 243 Query: 62 GYR 64 GYR Sbjct: 244 GYR 246 >UniRef50_C8WK97 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=C8WK97_EGGLE Length = 237 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ SR L + + V+V + IRK + + I T+ G Sbjct: 172 ILHVLMRSPDKVFSRELLYELVWKNGYYGEQNAVNVHVSNIRKKLAAAGGAGDYIKTVWG 231 Query: 61 EGYRFC 66 G++ Sbjct: 232 IGFKLA 237 >UniRef50_B0N9X7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0N9X7_EUBSP Length = 152 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G I S+ ++ + E D + IRR+RK E P PE I T+ G Sbjct: 82 ILYVLALHQGSILSKEQIYNFVWNGEYLWDDSNITSHIRRLRKKIEDDPSRPEYIQTVRG 141 Query: 61 EGYRFC 66 GYR Sbjct: 142 VGYRMN 147 >UniRef50_A8SR47 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SR47_9FIRM Length = 239 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 35/64 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ EN G++ ++ +++ + G TV V +R +R+ E+ P P++I T+ G Sbjct: 172 LVYMAENRGRVLTKEQIMSAVWGLYSDVEPSTVAVHVRWLREKLETDPSHPQLIRTVWGT 231 Query: 62 GYRF 65 GY Sbjct: 232 GYVL 235 >UniRef50_A6LXP4 Two component transcriptional regulator, winged helix family n=5 Tax=Clostridiales RepID=A6LXP4_CLOB8 Length = 227 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK+ +R ++++ G E DR++DV I+ +RK E +P+ I T+ Sbjct: 159 ILYILASNQGKVFTREAIIERAFGMEFDGSDRSIDVHIKNLRKKIEEDTKSPQYIVTVTK 218 Query: 61 EGYRF 65 GY+F Sbjct: 219 IGYKF 223 >UniRef50_A7HL55 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=A7HL55_FERNB Length = 229 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +N ++ S+ E+L + G + D TV+V + IRK +PE+I TI G Sbjct: 162 LLYLAKNKDRVVSKEEILDAVWGIDYYGSDNTVEVYVNYIRKKL-----SPELIKTIRGV 216 Query: 62 GYRFCGD 68 GY+ G+ Sbjct: 217 GYKLVGE 223 >UniRef50_B1YFK7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillales RepID=B1YFK7_EXIS2 Length = 230 Score = 94.8 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 38/67 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + HF +N ++ SR ELL + G +TVDV IRR+R+ E P P+ I T+ G Sbjct: 163 LCHFIKNEDQVMSRDELLDAVWGENYFGDRKTVDVNIRRLRQKIEENPAEPQFIETLWGH 222 Query: 62 GYRFCGD 68 GY++ + Sbjct: 223 GYKWRNE 229 >UniRef50_C1YUF6 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YUF6_NOCDA Length = 243 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M + G++ SR EL ++ + L P + T+ V IRR+R + P I T+ G Sbjct: 173 IMDFLLRHSGRVVSREELWTEVWHKPLPPVNNTIAVHIRRLRHKLGDSEAQPRFIHTVRG 232 Query: 61 EGYRFCG 67 GYR Sbjct: 233 IGYRLDT 239 >UniRef50_Q1J3D6 Two component transcriptional regulator, winged helix family n=4 Tax=Deinococci RepID=Q1J3D6_DEIGD Length = 244 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG +R LL+++ G + +R VDV I +R+ + P I T+ G Sbjct: 169 LFTLAQYPGLAWTRERLLERVWGVDYPRMERVVDVHITGLRRKLGDHAEHPRYIETVRGV 228 Query: 62 GYRFCGDLE 70 GYRF + + Sbjct: 229 GYRFRENGQ 237 >UniRef50_Q3Z7F8 Transcriptional regulator n=5 Tax=Dehalococcoides RepID=Q3Z7F8_DEHE1 Length = 223 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ SR LL K+ G + DRTVDV I R+R E T + T+ Sbjct: 158 LKFLAQNRGRVFSREALLNKVWGYDYYGGDRTVDVHITRLRGKIED--QTHTFVETVRNI 215 Query: 62 GYRF 65 GYRF Sbjct: 216 GYRF 219 >UniRef50_Q1J251 Two component transcriptional regulator PhoB n=5 Tax=Deinococci RepID=Q1J251_DEIGD Length = 229 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ +R ELL ++ G + +RTVD + ++R H P P + T+ G+ Sbjct: 159 LAFLTQNAGRVYTRTELLDRVWGADFLGGERTVDQHVTQLRAHLGDDPARPRFLETVRGK 218 Query: 62 GYRFCG 67 GYR Sbjct: 219 GYRMRP 224 >UniRef50_Q12T20 Two component transcriptional regulator, winged helix family n=11 Tax=Gammaproteobacteria RepID=Q12T20_SHEDO Length = 225 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+P K+ SR L + + P +DV I ++R+ FE PE+I T+ G Sbjct: 159 LKYLMEHPNKVISRTLLFEAVWDYHFDPRTNVIDVHIAKLRRKFEEIGF-PEMIETVRGA 217 Query: 62 GYRFCG 67 GYR Sbjct: 218 GYRLSK 223 >UniRef50_B9YDA4 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDA4_9FIRM Length = 235 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G+ +EL + G+ RTV V I +RK E P P+++ ++ G Sbjct: 163 ILAFLMQHAGQCYKASELYNHIWGKSSYGDHRTVVVHIHNLRKKIEQDPAEPQLLQSVWG 222 Query: 61 EGYRFCGD 68 +GY F + Sbjct: 223 KGYCFIDE 230 >UniRef50_C5D2L7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillaceae RepID=C5D2L7_GEOSW Length = 225 Score = 94.8 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++ G++ SR +LL ++ G + + RTVD I+ +R + + I T+ G Sbjct: 162 LLFLAKHHGQVFSREDLLAQVWGYDYTGNARTVDTHIKTLRMKLKQAS---DFIQTVWGI 218 Query: 62 GYRFC 66 GY+F Sbjct: 219 GYKFE 223 >UniRef50_Q026B5 Two component heavy metal response transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026B5_SOLUE Length = 238 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G+ SR +++ + + VDV IR +R ++I T+ G Sbjct: 156 ILEYMMRNKGRPLSRTMIVEHVWDMDYDGLTNIVDVYIRHLRSKI-DDRFQQKLIQTVRG 214 Query: 61 EGYRFCGDLE 70 GY + Sbjct: 215 IGYMIEAPDK 224 >UniRef50_Q3DDJ6 Phosphate regulon response regulator PhoB n=11 Tax=Bacteria RepID=Q3DDJ6_STRAG Length = 225 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F NP ++ +R ELL K+ G + RTVDV I +R +IAT+ G Sbjct: 160 LVLFFRNPNRVFTRQELLDKVWGEQFLGETRTVDVHIGTLRTKLGEDGY---LIATVRGV 216 Query: 62 GYRFCGDLE 70 GYR + Sbjct: 217 GYRLEERHD 225 >UniRef50_A6BHI5 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHI5_9FIRM Length = 140 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 32/68 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG+I S+ ++ ++ + V IRRIRK E P I + G Sbjct: 70 ILYLLAKNPGRIFSKEQIYTQVWKEPYYGAEDNVMGIIRRIRKKIEPDSAKPRYILNVWG 129 Query: 61 EGYRFCGD 68 GY+F G+ Sbjct: 130 MGYKFNGE 137 >UniRef50_Q3A924 DNA-binding response regulator n=3 Tax=Bacteria RepID=Q3A924_CARHZ Length = 236 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NPGK SR ELL+ G + ++RT+D I +RK E P PE I T+ G Sbjct: 162 LEAFLKNPGKAYSRLELLEYAIGEAYEGYERTIDTHISNLRKKIEKDPANPEYIQTVFGI 221 Query: 62 GYRFCGDLE 70 GY+ E Sbjct: 222 GYKLKPRGE 230 >UniRef50_B6FYV2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FYV2_9CLOT Length = 232 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 31/57 (54%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 N GK+ SR LL ++ G E RTVDV IR +RK E + I TI G GY+ Sbjct: 174 NRGKVLSRNFLLDEIWGYEYYGETRTVDVHIRYLRKKLEEAGADEKYIETIRGVGYK 230 >UniRef50_Q24Q12 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24Q12_DESHY Length = 168 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ +R +L + G + T+ V IR++R+ E P PE I T+ G Sbjct: 103 LSFMANHPGQVFTRQQLFDNLWGEKYLGDSGTITVFIRKVREKVELDPGRPEYILTVWGV 162 Query: 62 GYRFCG 67 GY+F G Sbjct: 163 GYKFAG 168 >UniRef50_D1PMF3 DNA-binding response regulator RegX3 n=3 Tax=Clostridiales RepID=D1PMF3_9FIRM Length = 239 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 36/70 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G I + L + + G++ ++ +++V IR +R+ E TP P + T+ G Sbjct: 169 ILQKLGENRGHIITYDALCEAVWGQDYYGYENSLNVHIRHLREKLEETPGKPRWLLTVRG 228 Query: 61 EGYRFCGDLE 70 GY+ G+ Sbjct: 229 IGYKLAGEAR 238 >UniRef50_Q5SMC3 Response regulator n=4 Tax=Deinococci RepID=Q5SMC3_THET8 Length = 223 Score = 94.4 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 41/67 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + PG++ +R ELL+++ G E + +R VD +R +RK P+ P I T+ G Sbjct: 157 LLVFAQAPGRVFTRGELLERVWGPEFEGSERVVDAYVRLLRKKLRDDPEAPRFIETVVGL 216 Query: 62 GYRFCGD 68 GYRF GD Sbjct: 217 GYRFLGD 223 >UniRef50_C6D6P8 Two component transcriptional regulator, winged helix family n=17 Tax=Firmicutes RepID=C6D6P8_PAESJ Length = 238 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHD-RTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P K+ S + +++ G TV V IR +RK + I T+ Sbjct: 171 ILYLLASHPKKVFSAEHIFQQVWGEAYYESGGNTVMVHIRTLRKKLGEDKQHQQWIKTVW 230 Query: 60 GEGYRFCG 67 G GY F G Sbjct: 231 GVGYAFQG 238 >UniRef50_D1C280 Two component transcriptional regulator, winged helix family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C280_SPHTD Length = 240 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG++ SR LL ++ G + DRTVD I R+RK E I T+ G Sbjct: 169 LHLLAANPGRVFSRDYLLHRVWGEDYVGVDRTVDTHILRLRKKLGGPGSPAERIVTLWGV 228 Query: 62 GYRFCGDLE 70 GY++ + Sbjct: 229 GYKYERPRD 237 >UniRef50_Q38YC7 Two-component system, response regulator (Possibly involved in phosphate regulation) n=12 Tax=Lactobacillales RepID=Q38YC7_LACSS Length = 237 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F K+QSR +LL + G + R VD+ + +R+ E P P + T+ G Sbjct: 166 LVYFMHRLNKVQSREKLLNAVWGFDYPAETRMVDIQVSHLREKIEDNPRHPVYLKTVRGF 225 Query: 62 GYRFCGDLED 71 GY+ D Sbjct: 226 GYQLEDPAHD 235 >UniRef50_C9XR57 Two-component response regulator n=11 Tax=Clostridiales RepID=C9XR57_CLODC Length = 244 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 33/69 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N + SR ++L ++ G + VDV IRRIR E P P+ I TI G Sbjct: 176 IVKYLISNAKQSLSRDQILDEVWGTNYLYDFKIVDVNIRRIRNKIEDDPSKPKYIQTIWG 235 Query: 61 EGYRFCGDL 69 GY F + Sbjct: 236 YGYCFRKEE 244 >UniRef50_C0D765 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D765_9CLOT Length = 260 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +F N KI ++ ++ + + + D T+ V IRR+R E +P P + I G G Sbjct: 186 KYFLSNQNKILTKDQIYRYVWNDDF-VDDNTIMVHIRRLRMKIEDSPGHPVYLKNIRGMG 244 Query: 63 YRFCGDL 69 Y+F + Sbjct: 245 YQFVAEE 251 >UniRef50_Q2SPE2 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=18 Tax=Proteobacteria RepID=Q2SPE2_HAHCH Length = 226 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NPG++ +R LL+K+ P +DV I R+R + +TP ++ TI G Sbjct: 160 LEYFMRNPGQVLTRTMLLEKVWDYHFDPQTNVIDVHISRLRAKIDKDFETP-LLHTIRGA 218 Query: 62 GYRFCG 67 GY Sbjct: 219 GYVLRE 224 >UniRef50_C7I0W4 Two component transcriptional regulator, winged helix family n=4 Tax=Proteobacteria RepID=C7I0W4_THIIN Length = 365 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +L+ + G E DR++DV + R+R+ E P P + TI G+ Sbjct: 295 LQAMVAHPNRVLSRDQLIDWLKGYERDAFDRSIDVRVARLRRKIEDDPARPVYVRTIRGQ 354 Query: 62 GYRFCG 67 GY F Sbjct: 355 GYLFNP 360 >UniRef50_Q3AEH2 DNA-binding response regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEH2_CARHZ Length = 226 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP +I ++ +++ ++ V V +RR+R+ E P +P II T+ G Sbjct: 160 LELLFKNPNRIFTKEQIMDRLWPDTFPEDPNIVSVLVRRLREKIEEDPSSPRIIKTVWGV 219 Query: 62 GYR 64 GY+ Sbjct: 220 GYK 222 >UniRef50_B1YJZ1 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YJZ1_EXIS2 Length = 220 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ENPG++ R +L++++ G + R +D I+ +RK I T+ G Sbjct: 157 ILHLLLENPGRVLEREQLIQQLWGFDAFGDTRFLDTHIKNLRKKI-----NVPYIQTVKG 211 Query: 61 EGYRFCG 67 GY+ Sbjct: 212 VGYKLEA 218 >UniRef50_C2EDI8 Response regulator n=11 Tax=Firmicutes RepID=C2EDI8_9LACO Length = 243 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + ++PGKI S + + + TV V IR++R E P P+ I T+ Sbjct: 172 ILRLMMQHPGKIFSTQNIYESVWREPYFYTCGNTVMVHIRKLRTKIEPDPQKPQYIKTVW 231 Query: 60 GEGYRFC 66 G+GYRF Sbjct: 232 GKGYRFE 238 >UniRef50_B8HQE6 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B8HQE6_CYAP4 Length = 228 Score = 94.4 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F +PG++ SR +LL ++ G + P VDV + +RK E+I T+ G G Sbjct: 164 ETFFRHPGQVLSREQLLDRVWGYDYDPGSNIVDVYVGYLRKKLG-----NELIETVRGMG 218 Query: 63 YRFCGDL 69 YR + Sbjct: 219 YRLKLPV 225 >UniRef50_Q1K367 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K367_DESAC Length = 233 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 32/64 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + + SR ++ + + G E DR+VD+ I R+R P P+++ T+ G Sbjct: 168 LWYLARHARTVLSRDQIYEALFGLEYNGVDRSVDIYISRLRNKLGEDPSRPQLLKTVRGV 227 Query: 62 GYRF 65 GY Sbjct: 228 GYLL 231 >UniRef50_B1ZTF2 Two component transcriptional regulator, winged helix family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTF2_OPITP Length = 248 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + G SR L + G P RT+D + R+RK T + P I + G Sbjct: 173 ILDLLARYAGTPVSRERLFDLVWGYTYLPETRTLDTHVWRLRKKIGDTGEEPRWIKNVPG 232 Query: 61 EGYRFC 66 GY+ Sbjct: 233 VGYQLD 238 >UniRef50_C0CI50 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CI50_9FIRM Length = 224 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +N G++ +R ++L+ + E +RT++V +RR+R+ E P P I T+ G Sbjct: 157 LEYFLKNRGQVLTREQILENVWDSYENFVDERTLNVNVRRLREKIEKDPKNPRYIVTMFG 216 Query: 61 EGYRF 65 GY++ Sbjct: 217 IGYKW 221 >UniRef50_D1C5Q5 Two component transcriptional regulator, winged helix family n=52 Tax=Bacteria RepID=D1C5Q5_SPHTD Length = 244 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +P ++ +R +++++ G + ++V + +R+H E+ P ++ T+ G Sbjct: 169 LLLFMRHPNQVLTRDVIMERVWGYDFPGESNVLEVYVSNLRRHLEA-GGEPRLLQTVRGA 227 Query: 62 GYRFCGDLED 71 GY E+ Sbjct: 228 GYALRLPTEE 237 >UniRef50_C7TA80 Two-component response regulator n=2 Tax=Lactobacillus rhamnosus GG RepID=C7TA80_LACRG Length = 218 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG + S+ + +K+ G + TV+V I+R+R + I T+ G Sbjct: 152 LKLLMIHPGHVFSKQAIYEKVWGESYIGDENTVNVCIKRLRDKIQDV--NQRYIRTVWGI 209 Query: 62 GYRFCGDLE 70 GY +E Sbjct: 210 GYVLEAGVE 218 >UniRef50_B0NH75 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NH75_EUBSP Length = 227 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +N ++ S+ L + + + D T+ V + R+RK E P+ I T+ G Sbjct: 162 IIRLFMDNVNRVFSKDALYEMVWDND-IVDDSTIVVYMNRLRKKLEEDFSNPKYILTVRG 220 Query: 61 EGYRFCG 67 GYRF Sbjct: 221 LGYRFVA 227 >UniRef50_C6C1C7 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfovibrio RepID=C6C1C7_DESAD Length = 232 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NPG+ +R +L+ + G++ DR++DV I ++R F+ PD I T+ G Sbjct: 166 LKALMDNPGRPMTRDDLMTSVWGKDFNAFDRSIDVHISKLRALFKPYPDHESRIKTVWGT 225 Query: 62 GYRFCGD 68 GY F + Sbjct: 226 GYMFVSE 232 >UniRef50_C4IAX3 DNA-binding response regulator n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAX3_CLOBU Length = 234 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG++ S+A+L + + G D T+ V I +R+ E P P+ I T+ G Sbjct: 166 ILAKLMKYPGRVYSKAQLYESINGEYCDSDDSTMMVHISNLREKIEEDPKNPKYIKTVRG 225 Query: 61 EGYRFC 66 GY+ Sbjct: 226 IGYKIE 231 >UniRef50_B3DZZ9 DNA-binding response regulator, OmpR family (REC-wHTH domains) n=6 Tax=Bacteria RepID=B3DZZ9_METI4 Length = 268 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ +R ++ +++ P VDV I+++RK + ++I T+ G Sbjct: 202 ILELLMRTPGRVFTRTQVCERVWNYHFDPGTNLVDVYIQKLRKKI-DEGEEQKLIQTVRG 260 Query: 61 EGYRFCG 67 GY+ Sbjct: 261 VGYKIEA 267 >UniRef50_Q04AR8 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=8 Tax=Bacteria RepID=Q04AR8_LACDB Length = 225 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG + SR E++ ++ RTVDV +R +R+ I T+ G Sbjct: 161 LKLLITHPGTVFSREEIMDQIWETGFYGETRTVDVHVRTLRQKLGEAGKH---IETVRGV 217 Query: 62 GYR 64 GYR Sbjct: 218 GYR 220 >UniRef50_Q5HR28 Response regulator saeR n=60 Tax=Staphylococcus RepID=SAER_STAEQ Length = 229 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ S++ELL+K+ G + TV+V I RIR+ E P I T+ G Sbjct: 162 LWYLASREGEVISKSELLEKVWGYDYYEDANTVNVHIHRIREKLEKHDFLPYTITTVWGL 221 Query: 62 GYRFC 66 GY+F Sbjct: 222 GYKFE 226 >UniRef50_UPI0001C379A1 regulatory protein VanR n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C379A1 Length = 239 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 32/68 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ENP K+ S+A L + + G D TV V + IR+ + E I T+ G Sbjct: 163 ILQLMLENPTKLWSKANLFESVWGENYLSDDNTVKVHMSNIRQKLKKLDPDTEYIETVWG 222 Query: 61 EGYRFCGD 68 GYR GD Sbjct: 223 MGYRLVGD 230 >UniRef50_A7HMZ4 Two component transcriptional regulator, winged helix family n=7 Tax=Thermotogaceae RepID=A7HMZ4_FERNB Length = 229 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P ++ SR E+L+ + E DR VDV I +RK I T+ G Sbjct: 156 ILKLLAQRPDRVYSREEILETIWTDEYDVFDRVVDVHINSLRKKLGKD-----WIITVRG 210 Query: 61 EGYRFCGDLE 70 GY+F + Sbjct: 211 VGYKFSKKGD 220 >UniRef50_C7N5H9 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5H9_SLAHD Length = 234 Score = 94.0 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P + +R ++L + G V V IR++R+ E+ P P I T G Sbjct: 169 ILLLMARRPNVVFTRQQILDSVWGYGYVGSSGVVAVFIRKLREKIEADPSRPVHIITEWG 228 Query: 61 EGYRFC 66 GYR Sbjct: 229 VGYRIV 234 >UniRef50_D0WJB9 Transcriptional regulator n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WJB9_9ACTN Length = 227 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P +I SR LL ++ G + RTVDV +RR+R P+ + I T+ G Sbjct: 164 LSFLVTHPDRIYSREVLLSQVWGFDYYGGSRTVDVHVRRLRAKLG--PEVAQRIETVRGA 221 Query: 62 GYRF 65 GY + Sbjct: 222 GYLW 225 >UniRef50_C7T954 Two-component response regulator n=10 Tax=Lactobacillus RepID=C7T954_LACRG Length = 228 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S E+ +++ +E +TV V + +R E D ++I T+ G Sbjct: 162 ILYLLASHPNRVFSADEIFERVWQQESIVSAKTVMVHVSHLRDKIEEATDGEKVIETVWG 221 Query: 61 EGYRFCG 67 GY+ Sbjct: 222 VGYKVEA 228 >UniRef50_C7H5J1 Two-component system response regulator (Fragment) n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5J1_9FIRM Length = 119 Score = 93.6 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +P + EL +K+ G+E RTV V I +R E P P + + G Sbjct: 47 ILTLFIRHPNTFFTANELYRKIWGKESLGDVRTVQVHIHNLRSKIEPDPAKPIYLKNVWG 106 Query: 61 EGYRFCGDLE 70 +GY F + E Sbjct: 107 KGYIFRPEGE 116 >UniRef50_A7ICZ4 Two component transcriptional regulator, winged helix family n=2 Tax=Alphaproteobacteria RepID=A7ICZ4_XANP2 Length = 255 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ +R LL R+ +P DR++DV + R+RK E+ P P+ I T+ G Sbjct: 185 LRVFLQNPNRVLTRDRLLDLAHDRDNEPFDRSIDVRVTRLRKKIEADPAKPQAIKTVRGV 244 Query: 62 GYRFCGDLE 70 GY F Sbjct: 245 GYLFVPGPR 253 >UniRef50_A5IKU4 Two component transcriptional regulator, winged helix family n=6 Tax=Thermotogaceae RepID=A5IKU4_THEP1 Length = 220 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L EN GK+ +R +LL+ E R VD I+RIRK E P+ P I TI G Sbjct: 153 ILLFLAENAGKVVTREKLLETFW--EDPVSPRVVDTVIKRIRKAIEDDPNRPRYIKTIWG 210 Query: 61 EGYRFCGDLE 70 GY F G Sbjct: 211 VGYMFTGGER 220 >UniRef50_C7NAQ8 Two component transcriptional regulator, winged helix family n=10 Tax=Bacteria RepID=C7NAQ8_LEPBD Length = 227 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N GKI R + + E + +DV IR +RK TP++I TI G Sbjct: 157 ILEYLIRNKGKILPRERIEDHIWNYEYEGGTNVIDVYIRYLRKKI-DDSYTPKLIHTIRG 215 Query: 61 EGYRFCGDLED 71 GY D E+ Sbjct: 216 LGYVLRVDNEN 226 >UniRef50_C7NFF7 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=11 Tax=Actinomycetales RepID=C7NFF7_KYTSD Length = 244 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ SR +L+++ + +T+D+ + +RK P IAT+ G Sbjct: 177 LHILVRDMGRVVSREQLMREAWQTDWVGSTKTLDMHVSGLRKKLGDDHSDPRFIATVRGV 236 Query: 62 GYRFCG 67 G+R Sbjct: 237 GFRLVT 242 >UniRef50_B2G959 Two-component response regulator n=13 Tax=Lactobacillus RepID=B2G959_LACRJ Length = 236 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G++ +R +L+ + G ++ R VD+ I +R E P + T+ G Sbjct: 172 LSYLVDHKGQVLNRDQLVNGVWGYDILDTSRIVDIHISHLRDKLEDDSQHPTHLLTVRGF 231 Query: 62 GYRFC 66 GY+F Sbjct: 232 GYKFV 236 >UniRef50_A4IPQ9 DNA-binding response regulator n=16 Tax=Bacillales RepID=A4IPQ9_GEOTN Length = 222 Score = 93.2 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 34/64 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +F + +I ++ +L + + G D+T+ V IR +R+ E P PEII TI G Sbjct: 156 IFQYFLRHLNQILTKEQLYEGVWGEPYIEGDKTLMVHIRYLREKLEKDPKNPEIIETIRG 215 Query: 61 EGYR 64 GYR Sbjct: 216 IGYR 219 >UniRef50_D1BPS5 Two component transcriptional regulator, winged helix family n=3 Tax=Veillonella RepID=D1BPS5_VEIPT Length = 224 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + SR ++L + + + + +DV I+ +RK T + ++I T+ G Sbjct: 158 LFYLASNENIVLSRQQILDHVWEYDYESYSNLIDVYIKNLRKKI-DTDENVKLIQTVRGV 216 Query: 62 GYRFCGD 68 GY + Sbjct: 217 GYVLKTE 223 >UniRef50_A5WBW4 Two component transcriptional regulator, winged helix family n=20 Tax=Gammaproteobacteria RepID=A5WBW4_PSYWF Length = 238 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+I SR ++ +++ G E DR++DV I RIR P+ P+ I T+ + Sbjct: 170 LWLLASNAGRILSREDIFERLRGIEYDGQDRSIDVRISRIRPKIGDDPENPKRIKTVRSK 229 Query: 62 GYRFCGD 68 GY F + Sbjct: 230 GYLFVKE 236 >UniRef50_Q2S514 Response regulator DrrA n=3 Tax=Rhodothermaceae RepID=Q2S514_SALRD Length = 237 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P K +R +LL+ + + +RTVD I+ +R+ I T+ G Sbjct: 168 LRYLVRHPRKAFTRQQLLETIWKDAMMVTERTVDAHIKNLREKLGDFAKH---IQTVRGV 224 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 225 GYRFVQEEE 233 >UniRef50_C8WRL2 Two component transcriptional regulator, winged helix family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL2_ALIAD Length = 231 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP K+ S+ +L ++ G + V+ + +RK PD P I T+ G Sbjct: 159 LELFMRNPNKVLSKEVILDRVWGPDADVIGNAVENYVHFLRKKI-DEPDLPSYITTVRGV 217 Query: 62 GYRFCGDL 69 GY F D Sbjct: 218 GYMFHPDP 225 >UniRef50_D1BL25 Two component transcriptional regulator, winged helix family n=3 Tax=Veillonella RepID=D1BL25_VEIPT Length = 229 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N + S+ EL ++ G + TV V I R+R+ E P + I T+ G Sbjct: 165 LEFLMRNRDIVFSKEELYSRVWGLDSYGDYATVAVHINRLREEIEDNPSDSKHIITVWGV 224 Query: 62 GYRFC 66 GY+F Sbjct: 225 GYKFV 229 >UniRef50_B1YK44 Two component transcriptional regulator, winged helix family n=5 Tax=Bacillales RepID=B1YK44_EXIS2 Length = 228 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N K+ SR +LL ++ G + + RTVD I+ +R + I T+ G Sbjct: 165 LHLFVQNNDKVFSREQLLDQIWGADYIGNLRTVDTHIKTLRLKLGEAGGS---IQTVWGI 221 Query: 62 GYRFCG 67 GY+F Sbjct: 222 GYKFEE 227 >UniRef50_A6TM13 Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TM13_ALKMQ Length = 231 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +PGK+ SR +LL K+ G R +D+ I +RK ++I TI G Sbjct: 167 LLLFVTHPGKVFSRDDLLTKLWGESFVSETRVIDMHISSLRKKL--DDSDNQLIETIRGV 224 Query: 62 GYRFCG 67 GYR Sbjct: 225 GYRLRK 230 >UniRef50_B5I213 Regulatory protein n=3 Tax=Streptomyces RepID=B5I213_9ACTO Length = 221 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +NP ++ +R +L+ + G RTVDV I R+R+ + I T+ Sbjct: 154 LAHLVQNPHRVHTRDQLVTTVWGYGHVGDGRTVDVHIARLRRKLGADFRGA--IQTVRRV 211 Query: 62 GYRFCGDLED 71 GY++ D Sbjct: 212 GYKYTPPTGD 221 >UniRef50_A7GIT8 DNA-binding response regulator n=11 Tax=Clostridium RepID=A7GIT8_CLOBL Length = 230 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ +EL +++ G+E +D ++ IR +R+ T + I T+ G Sbjct: 162 ILCLLARNKGRVFPSSELYERVWGQEFLENDNSLLTHIRNLREKLNDTVKNSKYIKTVWG 221 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 222 VGYKIEKE 229 >UniRef50_C1D266 Putative response regulator, OmpR n=1 Tax=Deinococcus deserti VCD115 RepID=C1D266_DEIDV Length = 700 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 NPG++ +RAE+L ++ E R +D ++++R+ I T+ G GY Sbjct: 157 LLARNPGRLYTRAEILDRVWESEYVGDGRVIDTYVKKLRQKLSVD-----CIETVRGLGY 211 Query: 64 RFCGDL 69 RF D+ Sbjct: 212 RFATDV 217 >UniRef50_C4L0X3 Two component transcriptional regulator, winged helix family n=10 Tax=Firmicutes RepID=C4L0X3_EXISA Length = 230 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 32/63 (50%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 H +N + SR LL + G +TVDV IRR+R+ E P P I T+ G GY Sbjct: 164 HLVQNEEIVLSRDALLDAVWGVNYFGDRKTVDVNIRRLRQKIEDDPSHPVYIETLWGHGY 223 Query: 64 RFC 66 ++ Sbjct: 224 KWR 226 >UniRef50_A4XGM2 Two component transcriptional regulator, winged helix family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XGM2_CALS8 Length = 221 Score = 92.8 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +N ++SR E+L+K+ G + RTVDV I+++R+ + +I T+ G Sbjct: 156 LLFLAKNKDLVKSRDEILEKVWGFDFIGETRTVDVHIKQLREKLKDYKF---LIKTVWGV 212 Query: 62 GYRFCGDLE 70 GY+ D E Sbjct: 213 GYKLSEDKE 221 >UniRef50_B2GF54 Two-component response regulator n=14 Tax=Lactobacillus RepID=B2GF54_LACF3 Length = 229 Score = 92.4 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 31/64 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S ++ +++ +E +TV V + +R E+ ++I T+ G Sbjct: 162 ILYLLASHPNRVFSADDIFERVWQQESVVSAKTVMVHVSHLRDKIEAATGGEKVIETVWG 221 Query: 61 EGYR 64 GY+ Sbjct: 222 VGYK 225 >UniRef50_B8G869 Two component transcriptional regulator, winged helix family n=3 Tax=Chloroflexus RepID=B8G869_CHLAD Length = 245 Score = 92.4 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +R LL ++ G V+V I +R+ ++I T++G Sbjct: 175 LEQFMRHPRRVFTRQTLLSRVWGFTYVGDSNIVEVHISNLREKIGDH--ERKLIRTVYGV 232 Query: 62 GYRFCGDLE 70 GY D E Sbjct: 233 GYTLRPDDE 241 >UniRef50_B9XEM3 Two component transcriptional regulator, winged helix family n=1 Tax=bacterium Ellin514 RepID=B9XEM3_9BACT Length = 226 Score = 92.4 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG+ SR L + G P RTVD I +R ES P+ P I T+HG Sbjct: 161 LRLLSEAPGEPISRERFLDVVWGYAAFPTTRTVDNHIASLRAKIESDPEKPRWIKTVHGV 220 Query: 62 GYRFCG 67 GYR G Sbjct: 221 GYRLEG 226 >UniRef50_A9WLJ1 Two-component response regulator n=4 Tax=Actinomycetales RepID=A9WLJ1_RENSM Length = 248 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 40/65 (61%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++PG+++SR +LL+ + G E R VD +I+R+R E P P+I+ T+ G Sbjct: 181 LLELLQHPGQVRSREQLLRSVWGAEYLLDSRMVDASIQRLRSKNEDDPSNPQIVVTVRGF 240 Query: 62 GYRFC 66 GYRF Sbjct: 241 GYRFD 245 >UniRef50_A4AL32 Putative two-component system response regulator n=2 Tax=Actinobacteria (class) RepID=A4AL32_9ACTN Length = 266 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG+ SR +LLK + G E TV VT+RR+R+ E+ P P I+AT+ G Sbjct: 198 LAFLLKHPGQAFSREQLLKSVWGWEF-GDLSTVTVTVRRLREKIETDPTHPTILATVWGV 256 Query: 62 GYRFC 66 GYR Sbjct: 257 GYRLN 261 >UniRef50_A5N471 VanR n=21 Tax=Bacteria RepID=A5N471_CLOK5 Length = 232 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + C N G++ S EL ++ G + + TV V IR +R+ + + P+ I T+ Sbjct: 165 ILWVLCSNRGRVVSSEELFHEVWGDKYFTNSNNTVMVHIRHLREKMHGSAEHPKYIKTVW 224 Query: 60 GEGYRFCG 67 G GY+ Sbjct: 225 GVGYKIEK 232 >UniRef50_C9LC31 Regulatory protein VanR n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LC31_RUMHA Length = 243 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 32/64 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P + ++ L + + G++ D T++V I ++RK E + I T+ G Sbjct: 178 LQLLIKHPKQTFTKESLYQLIWGKDYISDDNTLNVHISKLRKKLEHIGNQAPYIDTVWGI 237 Query: 62 GYRF 65 GY+ Sbjct: 238 GYKL 241 >UniRef50_C6QDD0 Two component transcriptional regulator, winged helix family n=5 Tax=Proteobacteria RepID=C6QDD0_9RHIZ Length = 262 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G++ +R LL+ + P +DV + R+R + D P ++ T+ G Sbjct: 195 LEYLMQHAGQVVTRTMLLEHVWDYHFDPQTNVIDVHVSRLRAKIDKNFDKP-LLHTVRGA 253 Query: 62 GY 63 GY Sbjct: 254 GY 255 >UniRef50_C6J6L0 Response regulator n=2 Tax=Bacillales RepID=C6J6L0_9BACL Length = 241 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ PG + +R +L+ + G + RTVDV + +RK E P + I +I G Sbjct: 168 VLLYLARKPGVVMTRDDLMNAVWGFDYIGGQRTVDVHVSSLRKKLELDPQS-VHIDSIRG 226 Query: 61 EGYRFC 66 GY+ Sbjct: 227 VGYKLV 232 >UniRef50_UPI000196AEE3 hypothetical protein CATMIT_00609 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AEE3 Length = 238 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ +PG + S ++ K+ E + T+ V IR++R+ E P TP I T+ G Sbjct: 172 ILVLLASHPGTVFSTEDIYTKIWHEEATHANNTIMVHIRKLREKIERQPRTPRHIITVWG 231 Query: 61 EGYRFC 66 GY+F Sbjct: 232 IGYKFE 237 >UniRef50_C2H8S4 Response regulator n=8 Tax=Enterococcus RepID=C2H8S4_ENTFC Length = 244 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F ENP ++ S+ ++ + + E T+ V I +R E+ P + + TI G G Sbjct: 170 RFFMENPDQVFSKEQIYRSVWNDEHF-DANTIMVFINHLRNKIEADPKNAKYLKTIWGIG 228 Query: 63 YRFCGDLE 70 Y F D + Sbjct: 229 YTFLPDGD 236 >UniRef50_C7N1J8 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=4 Tax=Coriobacteriaceae RepID=C7N1J8_SLAHD Length = 231 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + GK+ SR +LL++ G E +TVD I+R+R + P II T+ G Sbjct: 166 LSALMKVAGKVASREDLLREAWGWEYITETKTVDTHIKRLRDKLAAAGFDPGIIETVRGY 225 Query: 62 GYRFCG 67 GYRF Sbjct: 226 GYRFRA 231 >UniRef50_Q21DY6 Phosphate regulon transcriptional regulatory protein phoB n=3 Tax=Gammaproteobacteria RepID=Q21DY6_SACD2 Length = 234 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + ++ +R +LL + G + +RTVDV IRR+RK I T+ G Sbjct: 164 LEFFLTHQERVYTRNQLLDHVWGGNVYVEERTVDVHIRRLRKALSLEG-HDRFIQTVRGA 222 Query: 62 GYRFCGDL 69 GYRF + Sbjct: 223 GYRFSNKV 230 >UniRef50_B8CXQ9 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B8CXQ9_HALOH Length = 227 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ NPG++ +R +L KK+ G E K +DRT+D I+ IRK + ++I T++G Sbjct: 162 ILVTLIRNPGQVFTREQLAKKVMGLEYKGYDRTIDAHIKNIRKKL--NLEKNQLIITVYG 219 Query: 61 EGYRFCGD 68 GY+F GD Sbjct: 220 VGYKFEGD 227 >UniRef50_B7K7W8 Multi-component transcriptional regulator, winged helix family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K7W8_CYAP7 Length = 799 Score = 92.4 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 35/69 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N +I S++ L++ + + P + V I+ +R+ + +P +I T++G Sbjct: 157 ILELFLRNRNRIFSQSALIEHLWSFDEAPTENAVRTQIKSLRQKLKKAGASPNLIETVYG 216 Query: 61 EGYRFCGDL 69 GYR ++ Sbjct: 217 LGYRLNKNV 225 >UniRef50_A6LXL2 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridiaceae RepID=A6LXL2_CLOB8 Length = 238 Score = 92.1 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 37/67 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NP ++ SR +L++K G + DRTVD I+ IR+ ES P I T++G Sbjct: 165 ILTVFLSNPTQVFSREKLVEKAFGANYEGFDRTVDSYIKNIRQKIESNHKEPTYITTVYG 224 Query: 61 EGYRFCG 67 GY+F Sbjct: 225 MGYKFIP 231 >UniRef50_Q2RUW2 Two component transcriptional regulator, winged helix family n=23 Tax=Proteobacteria RepID=Q2RUW2_RHORT Length = 249 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 38/65 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ +R LL ++ R+ P DRTVDV + R+R+ E+ P P I T+HG Sbjct: 166 LCCFASRPGRVMTRDNLLDYVSHRDWAPSDRTVDVLVGRLRRKIEADPKAPRHIITVHGI 225 Query: 62 GYRFC 66 GY F Sbjct: 226 GYVFA 230 >UniRef50_D1CG76 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CG76_THET1 Length = 243 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 31/70 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ SR +L G +DV I RIRK P+ P+ IATI G Sbjct: 167 ILQRLMSSPNRVVSRDDLAMYAAGYVADTSSNQIDVYIGRIRKKLGDDPNDPKYIATIRG 226 Query: 61 EGYRFCGDLE 70 GY+F Sbjct: 227 SGYKFLSPDR 236 >UniRef50_C9XSY6 Two-component response regulator n=15 Tax=Firmicutes RepID=C9XSY6_CLODC Length = 241 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +N + SR ++L+K+ +D T+ V I+R+R+ P I T+ G Sbjct: 168 LLILIQNKNTVLSRTQILEKLWDVTYDFVNDNTLTVYIKRLREKIGDDLCEPIYIETVRG 227 Query: 61 EGYRFCGDLE 70 GY++ G Sbjct: 228 IGYKWIGSEN 237 >UniRef50_Q894P5 Transcriptional regulatory protein n=4 Tax=Clostridiales RepID=Q894P5_CLOTE Length = 231 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 34/63 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LH + P ++ + EL + + G + TV V IRRIR+ E P P+ I T+ G Sbjct: 166 LLHMAQYPNRVFGKDELFESIWGLDSIGDSATVTVHIRRIREKIEFNPSKPQYIETVWGV 225 Query: 62 GYR 64 GYR Sbjct: 226 GYR 228 >UniRef50_D0LUI4 Putative two component transcriptional regulator, winged helix family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUI4_HALO1 Length = 258 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 5/72 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ G++ +R +LL+K+ E RTVD+ +RR+R + +I T+ Sbjct: 189 LRFLAQHRGRVFTRDQLLQKVWSYEYTGGTRTVDIHVRRVRAKLGAQGT---LIETVRNV 245 Query: 62 GYRFCG--DLED 71 GY+ +D Sbjct: 246 GYKMRASRPDDD 257 >UniRef50_Q5WKN6 Two-component response regulator n=2 Tax=Firmicutes RepID=Q5WKN6_BACSK Length = 227 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P + S +LL K+ + TV V + R+R+ E+ P+ P+ I + G Sbjct: 163 LQLFLEHPRHVFSYDQLLDKLW--DGVGDKHTVRVHLSRLREKIEANPNDPQYIVNVWGI 220 Query: 62 GYRFCG 67 GYRF G Sbjct: 221 GYRFEG 226 >UniRef50_B2TJU3 Regulatory protein VanR n=9 Tax=Firmicutes RepID=B2TJU3_CLOBB Length = 230 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S E+ +K+ + + TV V + R+R E + +II T+ G Sbjct: 164 ILYLLATNRGRVFSAEEIFEKVWKEKYYQSNNTVMVHMSRLRDKLEKHMEGNKIIHTVWG 223 Query: 61 EGYRFCG 67 GY+ Sbjct: 224 VGYKIEK 230 >UniRef50_A7GA24 DNA-binding response regulator n=10 Tax=Clostridium RepID=A7GA24_CLOBL Length = 225 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP KI SR EL+ ++ + +DR +D I+ IR + P I TI G Sbjct: 159 ILFILARNPNKIFSREELMDYISRDNICIYDRIIDTHIKNIRAKLDQDSKNPTYIKTIRG 218 Query: 61 EGYRFC 66 GYRF Sbjct: 219 MGYRFN 224 >UniRef50_A8SVV6 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SVV6_9FIRM Length = 228 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +N G++ +R +++K+ E + T++V IRR+R+ E PE + T+ Sbjct: 160 ILELLIKNKGRVLTRDMIIQKIWDDNENYVDENTLNVHIRRLRQKIEKDAGNPEYVITVF 219 Query: 60 GEGYRF 65 G GY F Sbjct: 220 GIGYTF 225 >UniRef50_C0WUJ3 Response regulator n=3 Tax=Lactobacillus RepID=C0WUJ3_LACBU Length = 242 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + + ++ SR +LL+ + G + R VD+ I +R+ E P P+ + TI G G Sbjct: 172 QYLVGHENQVLSRDQLLQGVWGFDYSGQSRMVDIQIAHLREKIELDPKRPKYLKTIRGFG 231 Query: 63 YRFCGDLED 71 Y F +D Sbjct: 232 YEFSTGGDD 240 >UniRef50_B2TJI4 Regulatory protein VanR n=4 Tax=Clostridiales RepID=B2TJI4_CLOBB Length = 226 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N ++ S+A L + + E D+T+ I +R + + E I T+ G Sbjct: 159 ILELLMKNKNRVFSKANLYEFIWESEYLGDDKTIKTHISNLRSKLKEVNENEEYIETVWG 218 Query: 61 EGYRFCGD 68 GYR Sbjct: 219 MGYRLSKK 226 >UniRef50_C7N192 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Bacteria RepID=C7N192_SLAHD Length = 229 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M F ++PG++ ++ ++ + + + +V V + R+R I TI G Sbjct: 165 IMAMFMQHPGRVFTKQQIYECGWDEDYVAAENSVMVCMSRLRSKLGDDGQEA--IKTIRG 222 Query: 61 EGYRFCG 67 GYR Sbjct: 223 LGYRLEK 229 >UniRef50_B1WRX4 Two component transcriptional regulator n=11 Tax=Cyanobacteria RepID=B1WRX4_CYAA5 Length = 225 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR ++L+++ G + ++V +R +R E+ + +I T+ G Sbjct: 161 LEYLMSHPKQVLSRDQILERVWGYDFMGDSNIIEVYVRYLRLKLEAEQEK-RLIQTVRGV 219 Query: 62 GYRFC 66 GY Sbjct: 220 GYVLR 224 >UniRef50_Q49ZT8 Heme response regulator hssR n=7 Tax=Staphylococcus RepID=HSSR_STAS1 Length = 224 Score = 92.1 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ +R L++K+ G + + +RTVDV I+R+RK E + I T+ G Sbjct: 158 LFLLASNPRQVFNRDALIEKIWGFDYEGDERTVDVHIKRLRKRLEKIDAS-VTIHTVRGL 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_B7K5A2 Two component transcriptional regulator, winged helix family n=8 Tax=Cyanobacteria RepID=B7K5A2_CYAP8 Length = 231 Score = 92.1 bits (229), Expect = 6e-18, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ +R ++L+ + G + + ++V IR +R ES +I T+ G Sbjct: 166 LKYLMSHPKEVLTREKILENVWGYDFQGESNVIEVYIRYLRLKIESEG-HKRLIHTVRGV 224 Query: 62 GYRFCG 67 GY Sbjct: 225 GYVLRE 230 >UniRef50_A5ZNL8 Putative uncharacterized protein n=3 Tax=Ruminococcus RepID=A5ZNL8_9FIRM Length = 137 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ++PG+I + + + V I IR+ E P P I T+ G Sbjct: 66 ILLLLAKSPGRIFGKEMVYDLVWNEPYSGDYNVVMRHICNIREKIEDDPGQPLYIQTVRG 125 Query: 61 EGYRFCGD 68 GYRF G+ Sbjct: 126 VGYRFNGN 133 >UniRef50_B2TJG9 Regulatory protein VanR n=6 Tax=Firmicutes RepID=B2TJG9_CLOBB Length = 231 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L N G + S ++ K++ + + TV V I R+R+ E P P+II T+ G Sbjct: 165 ILLLLANNLGTVFSAEDIFKEVWKEKYFEGNNTVMVHIWRLREKIEENPKEPKIIETVWG 224 Query: 61 EGYRFCG 67 GY+ Sbjct: 225 VGYKIEE 231 >UniRef50_B3E8G4 Two component transcriptional regulator, winged helix family n=4 Tax=Desulfuromonadales RepID=B3E8G4_GEOLS Length = 233 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ SR EL+ K G + ++R+VD I+ +R+ E PE I T++G Sbjct: 163 LQALAASPGRTYSRDELVSKALGYQFDGYERSVDAHIKNLRQKIELDSRKPEFIKTVYGI 222 Query: 62 GYRFCGDLE 70 GY F G+ + Sbjct: 223 GYLFSGERD 231 >UniRef50_A9AVR8 Two component transcriptional regulator, winged helix family n=6 Tax=Chloroflexi (class) RepID=A9AVR8_HERA2 Length = 248 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G++ R L +++ G E VDV +RR+R+ E P P I T+ G Sbjct: 179 LYFLAANSGQVFDREVLFREVWGYEYVGQTNLVDVCVRRLREKIEEQPSKPRRILTVRGV 238 Query: 62 GYRFC 66 GY+ Sbjct: 239 GYKLA 243 >UniRef50_B9XFI9 Two component transcriptional regulator, winged helix family n=1 Tax=bacterium Ellin514 RepID=B9XFI9_9BACT Length = 226 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG+ +R ++L + G ++ +DR+VD + +R E+ P P +I TI Sbjct: 161 LEFFATRPGRALTRDQILDGVWGNDIVVNDRSVDRCVTTLRAKIETNPHQPVLIQTIRDV 220 Query: 62 GYRFCG 67 GYRF Sbjct: 221 GYRFES 226 >UniRef50_Q2S085 Response regulator DrrA n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S085_SALRD Length = 236 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR E+L ++ GR++ DRTVDV IR+IR+ E I T+ G Sbjct: 176 LYFLASHPGRVFSRQEILDEVWGRDVYVVDRTVDVHIRKIREKIG-----SEYIETVKGV 230 Query: 62 GYRF 65 GYR Sbjct: 231 GYRM 234 >UniRef50_Q2FY79 Transcriptional regulatory protein srrA n=168 Tax=Firmicutes RepID=SRRA_STAA8 Length = 241 Score = 91.7 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT-PEIIATIHG 60 +++ + P K+ R +LLK++ E RTVD ++R+R+ +I T+ G Sbjct: 167 LIYLAKTPNKVFDREQLLKEVWHYEFYGDLRTVDTHVKRLREKLNRVSSEAAHMIQTVWG 226 Query: 61 EGYRFCGDLED 71 GY+F D Sbjct: 227 VGYKFEVKSND 237 >UniRef50_A4J2J4 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J2J4_DESRM Length = 223 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + HF +P ++ +R +++ ++ G + ++V I +R+ E II T+ G Sbjct: 158 LAHFMHHPNQVLTREQIIDRVWGLDFTGGSNVLEVYINMLRQKIEDYGS--RIIHTVRGV 215 Query: 62 GYRFCGD 68 GY Sbjct: 216 GYVLKEQ 222 >UniRef50_A9G6M8 Two-component response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G6M8_SORC5 Length = 233 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ +RA+L+ ++ G DRT+D ++ +RK ++I T+ G Sbjct: 159 LACMLAAPGRVFTRAQLIDRVWGDGFAITDRTIDSHVKGLRKKVVEAGGDADLIETVRGV 218 Query: 62 GYR 64 GYR Sbjct: 219 GYR 221 >UniRef50_Q01YI3 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=Q01YI3_SOLUE Length = 225 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F G++ SR +L+ GR+ R VD I +R+ P P + + G Sbjct: 160 LDVFIRARGRVLSRDQLIAATWGRDTFTSARIVDNHIANLRRKIGDDPAEPRYLRNVRGL 219 Query: 62 GYRFCG 67 GYRF G Sbjct: 220 GYRFDG 225 >UniRef50_Q1DCL7 DNA-binding response regulator n=6 Tax=Cystobacterineae RepID=Q1DCL7_MYXXD Length = 232 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 35/65 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + HF +PG+ +R ELL G + RTVD +R++R FE P+ P T+ G Sbjct: 167 LAHFLAHPGRTFTREELLSGAWGYHYEGSARTVDNFMRQLRLKFEPDPEAPRHFLTVRGL 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFE 231 >UniRef50_A6LXW1 Two component transcriptional regulator, winged helix family n=5 Tax=Firmicutes RepID=A6LXW1_CLOB8 Length = 238 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 39/71 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + P K +R EL+ G + +DR VD ++ IR+ E+ P P+ I T+HG Sbjct: 165 ILMTLLKYPNKTFTREELISTALGDDYDGYDRNVDTHVKNIRQKIETNPKDPQYIITVHG 224 Query: 61 EGYRFCGDLED 71 GYRF G+ + Sbjct: 225 TGYRFGGEFNE 235 >UniRef50_B0TCF4 Two-component response regulator resd n=4 Tax=Firmicutes RepID=B0TCF4_HELMI Length = 240 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFEST-PDTPEIIATIHG 60 +L+ +N G++ SR LL ++ G E RTVD +RR+R+ P + T+ G Sbjct: 172 LLYLAQNAGRVLSRDLLLDRVWGYEFAGDSRTVDTHVRRLREKLSRISPAVASYVGTVRG 231 Query: 61 EGYRFCGDL 69 GY+F + Sbjct: 232 SGYKFEVNP 240 >UniRef50_A4FEZ3 Two-component response regulator n=4 Tax=Bacteria RepID=A4FEZ3_SACEN Length = 234 Score = 91.7 bits (228), Expect = 7e-18, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +PG+ SRAELL+++ G TV V +RR+R+ E P P I T+ G Sbjct: 168 LVFLLRHPGRAFSRAELLEQVWGWSF-GDHSTVTVHMRRLREKVEPDPARPVRINTVWGV 226 Query: 62 GYRFCG 67 GYR+ Sbjct: 227 GYRYDP 232 >UniRef50_Q5KTV1 Putative uncharacterized protein n=1 Tax=Staphylococcus aureus RepID=Q5KTV1_STAAU Length = 232 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 29/67 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ENP KI S+A L + + + + TV+V + +R T I TI G Sbjct: 166 ILQLLMENPQKIYSKANLFETVWEDKFHGDENTVNVHMSNLRNKLAQNNATDTYIETIWG 225 Query: 61 EGYRFCG 67 GYR Sbjct: 226 IGYRLKS 232 >UniRef50_C5D3X1 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=C5D3X1_GEOSW Length = 232 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + NP ++ +R +LL ++ G E RTVDV I+RIR I TI G G Sbjct: 165 YYLAMNPKQVLTRQQLLDRVWGYEFNGDPRTVDVHIKRIRDKLAEHKAKWS-IVTIRGVG 223 Query: 63 YRFCGD 68 YRF + Sbjct: 224 YRFEEN 229 >UniRef50_C0X3L2 Response regulator n=22 Tax=Enterococcus faecalis RepID=C0X3L2_ENTFA Length = 240 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F ENP ++ S+ ++ + G T+ V I R+R E P P + T+ G G Sbjct: 170 QFFLENPEQVFSKEQIYSSVWGTG-DVDANTIMVFINRLRSKLEENPKEPCYLRTVWGIG 228 Query: 63 YRFCGD 68 Y F D Sbjct: 229 YTFTPD 234 >UniRef50_B9CPY7 DNA-binding response regulator n=3 Tax=Staphylococcus RepID=B9CPY7_STACP Length = 225 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP I +R ++++K+ G + + DRTVDV I+R+R+ + I T+ G+ Sbjct: 159 LFLLVSNPKHIFTRNDIIEKIWGFDYEGDDRTVDVHIKRLRQKLSRLGASIS-IHTVRGQ 217 Query: 62 GYRFCGDL 69 GY+ D+ Sbjct: 218 GYKVNQDV 225 >UniRef50_B3WB53 Response regulator n=35 Tax=Bacilli RepID=B3WB53_LACCB Length = 233 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + + SR +LL + G + +DV IR +R + + ++I T+ G Sbjct: 163 LVELVAHQDEACSRDDLLAAVWGTDFDGQPNILDVYIRNLRHKIDDHSGSKKLIHTVRGV 222 Query: 62 GYRFCGDL 69 GY ++ Sbjct: 223 GYMLSANV 230 >UniRef50_C6IVK1 Response regulator (Fragment) n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVK1_9BACL Length = 113 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR LL+++ + RTVD+ ++R+RK + I T++G Sbjct: 48 LALLAGHPGRVYSREALLEQVWDMDFAGGTRTVDMHVQRLRKKLGQWN---DCIQTVYGI 104 Query: 62 GYR 64 GY+ Sbjct: 105 GYK 107 >UniRef50_Q8VTU3 Putative response regulator RR23 n=1 Tax=Listeria monocytogenes RepID=Q8VTU3_LISMO Length = 225 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+I +R EL++++ R+ DRTVDV I+R+R HF I T+ G Sbjct: 159 LYQLASYPGRIFTREELIERIWQRDYDGSDRTVDVHIKRLRDHF-DEEKDGIRIVTVRGV 217 Query: 62 GYRFCG 67 GY+ Sbjct: 218 GYKLEE 223 >UniRef50_B1YEH2 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YEH2_EXIS2 Length = 222 Score = 91.3 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ SR EL++ + G + DRTVDV I+R+R I T+ G Sbjct: 157 LHQLASFPGRVFSREELIEHVWGLDFMGDDRTVDVHIKRLRTRLHQ--TEAITIETVRGL 214 Query: 62 GYRFC 66 GYR Sbjct: 215 GYRLE 219 >UniRef50_B1ZQC8 Two component transcriptional regulator, winged helix family n=6 Tax=Bacteria RepID=B1ZQC8_OPITP Length = 241 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 35/70 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ SR +L G + +DR++D+ + R+R+ P P I T+ G Sbjct: 172 LGYLARNRGRVMSRDRILDGTRGIDWDAYDRSIDILVSRLRQKLGDDPKRPTFIRTVRGV 231 Query: 62 GYRFCGDLED 71 GY F G + Sbjct: 232 GYSFIGGGRE 241 >UniRef50_D0MGI0 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGI0_RHOM4 Length = 243 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ +R ELL ++ GR++ DRTVDV IR+IR+ I T+ G Sbjct: 183 LYFLAAHPGKVFTRQELLDEVWGRDVYVVDRTVDVHIRKIREKLG-----SHYIETVKGV 237 Query: 62 GYRFCG 67 GY+F Sbjct: 238 GYKFRE 243 >UniRef50_Q2JPV2 DNA-binding response regulator n=17 Tax=Bacteria RepID=Q2JPV2_SYNJB Length = 230 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+P ++ +R ++L+ + G + ++V IR +R E P +I T+ G Sbjct: 166 LRYLMEHPRQVLTRQQILEHVWGCDFTGDSNIIEVYIRYLRLKIE-GPGEKRLIQTVRGV 224 Query: 62 GYRFC 66 GY Sbjct: 225 GYVLR 229 >UniRef50_C4L340 Two component transcriptional regulator, winged helix family n=5 Tax=Bacillales RepID=C4L340_EXISA Length = 229 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N K+ SR +LL ++ G E + RTVD I+ +R I T+ G Sbjct: 165 LYLFITNDEKVFSREQLLDQIWGTEYHGNLRTVDTHIKTLRLKLGEAGG---YIQTVWGI 221 Query: 62 GYRFCGD 68 GY+F + Sbjct: 222 GYKFEAN 228 >UniRef50_Q2SNE0 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SNE0_HAHCH Length = 244 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATI 58 + + E+ + SR ELL K+ G +L RTVD+ I ++R+ E+ P P+ + T+ Sbjct: 174 VLQYLHEHSERPVSREELLNKVWGYARDLDIETRTVDIHIAKLRRKIEADPKQPQRLVTV 233 Query: 59 HGEGYRF 65 G GYR Sbjct: 234 RGGGYRL 240 >UniRef50_A6LZK7 Two component transcriptional regulator, winged helix family n=7 Tax=Firmicutes RepID=A6LZK7_CLOB8 Length = 226 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ S+A L + + E D T++V I IR +S E I TI G Sbjct: 161 ILFLLLSHPQKVFSKANLFESIWNEEYFSEDNTLNVHISNIRNKLKSANANEEYIETIWG 220 Query: 61 EGYRF 65 GY+ Sbjct: 221 MGYKL 225 >UniRef50_D2LY16 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillus RepID=D2LY16_BACS4 Length = 228 Score = 91.3 bits (227), Expect = 9e-18, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F ENP + SR +L++++ ++ DRT+D I+++R+ E P P+ I T+ G Sbjct: 162 LFYFMENPNIVLSREQLIQQIHPHTDVDILDRTIDAHIKKLREKIEDVPSKPKKIQTVRG 221 Query: 61 EGYRFC 66 GYRF Sbjct: 222 MGYRFV 227 >UniRef50_Q4ZQ24 Response regulator receiver:Transcriptional regulatory protein, C-terminal n=9 Tax=Gammaproteobacteria RepID=Q4ZQ24_PSEU2 Length = 247 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ SR E+ + G DR++DV I RIR P P +I T+ + Sbjct: 169 LWLLVANAGRTLSREEIFTALRGVGYDGQDRSIDVRISRIRPKIGDDPIHPRLIKTVRSK 228 Query: 62 GYRFCGD 68 GY F + Sbjct: 229 GYLFVPE 235 >UniRef50_Q182M4 Two-component response regulator n=14 Tax=Clostridiales RepID=Q182M4_CLOD6 Length = 242 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN + ++ +LL+ + D T+ V IRR+R+ E P P+ I T+ G Sbjct: 170 LKYLMENSMQTLTKEQLLESLWDSSGNFVDDNTIAVNIRRLRQKVEKNPSEPKYIKTVRG 229 Query: 61 EGYRF 65 GY + Sbjct: 230 VGYMW 234 >UniRef50_UPI0001AEBD7C two component transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBD7C Length = 250 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPD---TPEIIATI 58 + +FC +P ++ SR +LL ++ G + ++ TV+ I R+R + +++ T+ Sbjct: 172 LDYFCRHPNQVFSRNQLLSEVWGYNHEGYEHTVNTHINRLRTKLDKINSIENGGQLVETV 231 Query: 59 HGEGYRFC 66 G GY+ Sbjct: 232 WGVGYKLN 239 >UniRef50_Q02BS1 Response regulator receiver protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02BS1_SOLUE Length = 129 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ G+I R LL ++ G + RT+DV +RR+RK + I TI G Sbjct: 46 LALLVQHAGEIIPREALLMQVWGYGAEIRTRTLDVHVRRLRKKLG--GYADQYIETIFGI 103 Query: 62 GYRFCG 67 GYRF Sbjct: 104 GYRFQP 109 >UniRef50_C6LJU9 Two-component response regulator for energy transfer from phycobilisomes to photosystem n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LJU9_9FIRM Length = 141 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +PG + ++ ++ +++ + + D ++ IR +RK E+ P P+ I T+ G Sbjct: 72 LTYMARHPGWVFTKKQIYEELYEDVQTENIDNSIYCLIRGLRKKIEADPGNPKYIQTVRG 131 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 132 IGYKFTIPEE 141 >UniRef50_A5CZK5 Response regulator n=3 Tax=Clostridiales RepID=A5CZK5_PELTS Length = 240 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP + +L++ + R++ V I ++RK E P P+ I ++ G Sbjct: 167 ILALLAKNPNRFFGADQLMEVIWKTRESVDHRSLMVHISKLRKKIEEDPANPKFIISVRG 226 Query: 61 EGYRFCG 67 GY+F Sbjct: 227 FGYKFSS 233 >UniRef50_Q4ZUU7 Response regulator receiver:Transcriptional regulatory protein, C-terminal n=18 Tax=Proteobacteria RepID=Q4ZUU7_PSEU2 Length = 259 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 38/68 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E P ++ SR +LL GR ++ DR++D+ + R+R+ P P++I T+ GE Sbjct: 190 LRVFLERPHRVLSREQLLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKNPQLIKTVRGE 249 Query: 62 GYRFCGDL 69 GY F Sbjct: 250 GYLFDARE 257 >UniRef50_B8FS97 Two component transcriptional regulator, winged helix family n=6 Tax=Firmicutes RepID=B8FS97_DESHD Length = 239 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G I + L + + G +L ++ T+ V IRR+R+ E P +P + T+ G Sbjct: 170 LAKLYENRGSIVTGDSLCRAVWGDDLYGYENTLMVHIRRLREKIEPEPSSPRYLLTVRGL 229 Query: 62 GYRFCGDLE 70 GY+ G +E Sbjct: 230 GYKLTGVVE 238 >UniRef50_C0C3P9 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3P9_9CLOT Length = 241 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG+I +R +LL ++ G + + RTVD I+ +R+ I T+ Sbjct: 177 LYFLMVNPGQIFARDQLLNRIWGYDFEGTTRTVDTHIKTLRQKLGDEGKH---IVTLIRS 233 Query: 62 GYRFCGDL 69 GY+F + Sbjct: 234 GYKFEVAV 241 >UniRef50_B1WXJ7 Two-component response regulator n=2 Tax=Chroococcales RepID=B1WXJ7_CYAA5 Length = 226 Score = 90.9 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR ++L + G E + ++V IR +R E D +I T+ G Sbjct: 161 LKYLMSHPQEVLSREKILDNVWGEEFQGESNVIEVYIRYLRIKIE-NEDHKRLIHTVRGV 219 Query: 62 GYRFCG 67 GY Sbjct: 220 GYVLRE 225 >UniRef50_B1KWY3 DNA-binding response regulator n=33 Tax=Firmicutes RepID=B1KWY3_CLOBM Length = 237 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L EN G + SR LL+K+ + T++V I+R+R+ E P PE I T+ G Sbjct: 171 LLILVENKGNVLSRNILLEKIWDVDGSFVDGNTLNVYIKRLREKIEKDPKKPEYIETVRG 230 Query: 61 EGYRFCG 67 GYR+ Sbjct: 231 IGYRWSE 237 >UniRef50_C0WM98 Possible response regulator n=3 Tax=Lactobacillus RepID=C0WM98_LACBU Length = 248 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + + SR ++ + G R +D I +RK E P P+++ TI G Sbjct: 172 LLFFISHSNTVLSRTQIASAVWGNTSGATLRIIDTHISNLRKKIEKQPKNPQMLKTIRGF 231 Query: 62 GYRFCGD 68 GY F + Sbjct: 232 GYLFKVE 238 >UniRef50_A7X5Y5 Heme response regulator hssR n=71 Tax=Bacillales RepID=HSSR_STAA1 Length = 224 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P +I +R ++++K+ G + + +RTVDV I+R+R+ + T I T+ G+ Sbjct: 158 LFMLAARPKQIFTREQIIEKIWGYDYEGDERTVDVHIKRLRQRLKKLNATLT-IETVRGQ 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_UPI000050FA0F putative two-component system response regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FA0F Length = 338 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L E P + SR ++ + G E R VDV I+R+RK + +I T+ G Sbjct: 277 VLLLLTEQPEHVYSREKIAFTVWGYEWAGDSRVVDVHIQRLRKKIGAN-----MIETVRG 331 Query: 61 EGYRFCG 67 GYRF G Sbjct: 332 FGYRFAG 338 >UniRef50_Q186H9 Two-component response regulator n=28 Tax=Bacteria RepID=Q186H9_CLOD6 Length = 233 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + CE+ GK+ EL + + G + ++ TV I R+R+ P+ I T+ G Sbjct: 167 ILWYLCEHQGKVVPSEELFEAVWGEKYLDNNNTVMAHIGRLREKIHEPSKNPKFIKTVWG 226 Query: 61 EGY 63 GY Sbjct: 227 VGY 229 >UniRef50_B8IVD0 Two component transcriptional regulator, winged helix family n=10 Tax=Alphaproteobacteria RepID=B8IVD0_METNO Length = 245 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 40/69 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG++ SR L+ GRE DR++D + R+R+ E+ P P++I ++ G Sbjct: 175 LAAMAKHPGRVLSRDMLMDLTRGREWDALDRSIDAQVVRLRRKLEADPKNPKLIKSVRGA 234 Query: 62 GYRFCGDLE 70 GY F G +E Sbjct: 235 GYVFAGRIE 243 >UniRef50_C1XS75 Two component transcriptional regulator, winged helix family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS75_9DEIN Length = 219 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NPG+I +R E+L+++ G + +DV ++ +RK +I T+ G Sbjct: 157 VLELFVINPGRIFTREEVLERVWGPGFESDSNLIDVYVKNLRKKLYDN-----VIETVRG 211 Query: 61 EGYRFCG 67 GYRF Sbjct: 212 LGYRFAE 218 >UniRef50_Q2T1W7 DNA-binding response regulator n=22 Tax=Proteobacteria RepID=Q2T1W7_BURTA Length = 272 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G+ +R L + + G P +DV + R+RK + TP +I T+ G Sbjct: 208 VLEFMMRHAGQTITRMMLFEAVWGYHFDPGTNLIDVHMGRLRKKIDPPDATP-MIRTVRG 266 Query: 61 EGYRF 65 GY Sbjct: 267 AGYIL 271 >UniRef50_Q2SL72 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=56 Tax=Proteobacteria RepID=Q2SL72_HAHCH Length = 264 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ SR E+ + G E DR++DV + RIR P P I T+ + Sbjct: 197 LWLLASSAGRVLSREEIFTALRGIEYDGQDRSIDVRVSRIRPKIGDDPVHPRRIKTVRSK 256 Query: 62 GYRFCGD 68 GY F + Sbjct: 257 GYLFVKE 263 >UniRef50_C7LSY9 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfovibrionales RepID=C7LSY9_DESBD Length = 231 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 F N GK+ SR +LL G E + + RTVD +RR+RK + + T+ G GYR Sbjct: 167 FVRNEGKVLSREQLLSNAWGYEFEGYSRTVDTHVRRLRKKLGPYA---DWLETVRGIGYR 223 Query: 65 FCGD 68 + Sbjct: 224 MKRE 227 >UniRef50_B4U9Z2 Two component transcriptional regulator, winged helix family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9Z2_HYDS0 Length = 229 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN KI +R +++ + +DRTVDV I+ +R + I TI G Sbjct: 163 ILKYLLENIDKIMTRDKIINMLWSYGTDINDRTVDVHIKHLRDKLGDFG---KYIRTIRG 219 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 220 VGYKFSLKDE 229 >UniRef50_B2A8D5 Two component transcriptional regulator, winged helix family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A8D5_NATTJ Length = 234 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P K+ SR L ++ G + RT+D I+ +R+ E P P I T+ G Sbjct: 167 ILSTLALYPKKVFSRENLADRIYGYLWEGDSRTIDTHIKNLRRKIEQNPKKPIFIKTVFG 226 Query: 61 EGYRF 65 GY+F Sbjct: 227 AGYQF 231 >UniRef50_A6NWH9 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWH9_9BACE Length = 147 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 31/69 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ S+A+L G E +V+ I R+RK E P P I T+ G Sbjct: 73 LYCMASSPGQVFSKAQLYAAAWGEEYLHGTNSVENIIWRLRKKLEPDPRNPIYIKTVIGM 132 Query: 62 GYRFCGDLE 70 GY+ Sbjct: 133 GYKMVVPEN 141 >UniRef50_UPI0001C31E43 two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31E43 Length = 251 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++++R ELL+ + G R +DV +R +R+ E PD+P I T+ G Sbjct: 185 LEALMADPGRLRNRQELLRAIWGDSAYRDPRAIDVHVRHLREKLEPEPDSPRHIVTVRGA 244 Query: 62 GYRFCG 67 GYR Sbjct: 245 GYRLQA 250 >UniRef50_P0AA18 Transcriptional regulatory protein ompR n=242 Tax=Bacteria RepID=OMPR_ECO57 Length = 239 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P + SR +L+ GRE +R++DV I R+R+ E P P I T+ G Sbjct: 168 VLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWG 227 Query: 61 EGYRFCGD 68 GY F D Sbjct: 228 LGYVFVPD 235 >UniRef50_Q0IC97 DNA-binding response regulator n=3 Tax=Synechococcus RepID=Q0IC97_SYNS3 Length = 240 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + SR +L++ + G + + VDV +R +RK E+ +I T+ G Sbjct: 173 LDCFMRHPRQALSRGQLIQHVWGDDYFGDENVVDVFVRYLRKKLEAGGSE-RVIQTVRGV 231 Query: 62 GYRFCGDLE 70 G+ + + Sbjct: 232 GFALRMNDQ 240 >UniRef50_A6TKQ5 Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ5_ALKMQ Length = 236 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P ++ R EL++ + G + + DR +D+ I+R+RK +S I T+ G Sbjct: 167 LKYLMMYPNQVFKREELIEGIWGWDFEGEDRVIDLYIKRLRKRLKSKTKQSWSIKTVWGI 226 Query: 62 GYRFCGD 68 GY+F + Sbjct: 227 GYKFEVE 233 >UniRef50_C6MYB5 DNA-binding response regulator n=2 Tax=Legionella RepID=C6MYB5_9GAMM Length = 247 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 43/69 (62%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F E+PG+I +R +L+ + ++ DRT+DV I R+RK E P P+++ TI G Sbjct: 177 LLIFLEHPGRILNRDQLMDLLYDKDCDSQDRTIDVLIGRLRKKIEQDPRNPQLLLTIRGG 236 Query: 62 GYRFCGDLE 70 GY+F ++ Sbjct: 237 GYQFKTKVD 245 >UniRef50_B6WUI4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WUI4_9DELT Length = 254 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ SR ELL++ GR P+DR++DV I R+R P++I T+ G+ Sbjct: 168 LEIFLQNPQRVLSRDELLERTQGRNAVPYDRSIDVQISRLRTRLRDNGREPQLIKTVRGD 227 Query: 62 GYRFCGDLE 70 GY D+ Sbjct: 228 GYVLATDVR 236 >UniRef50_C6D0P6 Two component transcriptional regulator, winged helix family n=9 Tax=Bacillales RepID=C6D0P6_PAESJ Length = 216 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + +N G+I R LL ++ G + DRTVD IRR+R+ I T G G Sbjct: 153 KYLIQNKGQIVPRKMLLDQVWGFDYYGDDRTVDTHIRRLREKIGE-----TRIKTFRGLG 207 Query: 63 YRFCGDLED 71 Y ++ Sbjct: 208 YSLEEHPDE 216 >UniRef50_B1XXD9 Two component transcriptional regulator, winged helix family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXD9_LEPCP Length = 263 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL + G + RTVD IRR+R+ FE+ E+I T+ G Sbjct: 185 LGCLMAHPDRVLSRDQLLALVWGEDGTTDPRTVDQNIRRLRRCFEAAGA-GELIRTVRGL 243 Query: 62 GYRFC 66 GYR Sbjct: 244 GYRLT 248 >UniRef50_A5WB94 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=A5WB94_PSEP1 Length = 240 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 37/65 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG+I +R ELL K++GR +P DR++D I R+R+ E P P I T G Sbjct: 169 LAALLEKPGEIVTRDELLNKVSGRASEPFDRSIDNQISRLRRKIEPDPKNPIYIRTHWGG 228 Query: 62 GYRFC 66 GY F Sbjct: 229 GYAFV 233 >UniRef50_Q2BM87 DNA-binding response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BM87_9GAMM Length = 236 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++P +I SR +LL G P+DR++DV + R+RK E P PE+I T++G Sbjct: 170 LLALLKHPYQILSRDQLL----GENCVPYDRSIDVRMSRLRKKIEEDPQQPELIKTVYGA 225 Query: 62 GYRFCGDLE 70 GY F ++ Sbjct: 226 GYMFTSEVR 234 >UniRef50_B1IEF4 Regulatory protein VanR n=17 Tax=Firmicutes RepID=B1IEF4_CLOBK Length = 233 Score = 90.5 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPE-IIATIH 59 + NP K+ S+A + + + G E D TV+V + R+R + E I T+ Sbjct: 166 VLELLLNNPNKVYSKANIFESIWGEEFLGDDNTVNVHVSRLRSKLSKANNNGEDYIETVW 225 Query: 60 GEGYRFCG 67 GYR Sbjct: 226 AMGYRLRK 233 >UniRef50_A0LPJ2 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=A0LPJ2_SYNFM Length = 263 Score = 90.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ +RAE+L+ + G P V+V I R+R+ E P+ P ++ T Sbjct: 190 LEYLMRNKGRVVTRAEILENVWGYNFVPATNVVEVHICRLREKLER-PNKPRLLQTFRKA 248 Query: 62 GYRFCGD 68 GY D Sbjct: 249 GYALVED 255 >UniRef50_C0D2V9 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2V9_9CLOT Length = 229 Score = 90.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 HF N + S+ +L + D TV VTIR +R+ E P +P+ + T++G G Sbjct: 164 QHFLHNVNHVFSKEQLYTAVWKDNC-VDDNTVMVTIRNLRQKIEDDPKSPKYLLTVYGIG 222 Query: 63 YRFC 66 Y+F Sbjct: 223 YKFV 226 >UniRef50_D0WLW8 DNA-binding response regulator RegX3 n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WLW8_9ACTO Length = 262 Score = 90.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ + ELL K+ G + T+ V +RR+R+ E PD P I T+ G Sbjct: 166 LAYLVANRGRVVEKRELLNKVWGGAVTGDG-TLAVHVRRLRRRIEPDPDNPVYICTVWGR 224 Query: 62 GYRFCG 67 GYRF Sbjct: 225 GYRFRE 230 >UniRef50_C9ZHF5 Putative regulatory protein n=6 Tax=Streptomyces RepID=C9ZHF5_STRSW Length = 202 Score = 90.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +P ++ +R +L+ + G RTVDV I R+R+ + I T+ Sbjct: 135 LAHLVAHPHRVHTRDQLVTTVWGYGHVGDGRTVDVHIARLRRKLGAEFRQA--IQTVRRV 192 Query: 62 GYRFCGDLE 70 GY++ L+ Sbjct: 193 GYKYTPPLD 201 >UniRef50_C3RMH7 Signal transduction regulator n=8 Tax=Bacteria RepID=C3RMH7_9MOLU Length = 229 Score = 90.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N ++ R ELL ++ G + R +DV IR +R + I TI Sbjct: 160 LVYLMDNKHRVVEREELLNEIWGYDFIGESRALDVHIRALRSKLNDDG--HKYIKTIRSV 217 Query: 62 GYRFCGDLE 70 GYRF + + Sbjct: 218 GYRFYEEGD 226 >UniRef50_C6VZ09 Two component transcriptional regulator, winged helix family n=28 Tax=Bacteroidetes RepID=C6VZ09_DYAFD Length = 236 Score = 90.5 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P K+ SR ELL+K+ G ++ +RTVDV IR++R+ I T+ G Sbjct: 173 LFFLAQTPNKVFSRDELLQKIWGADIYVLERTVDVHIRKLREKLGD-----TYIKTLKGV 227 Query: 62 GYRFCGDLE 70 GY F + E Sbjct: 228 GYMFSNERE 236 >UniRef50_A0PYF5 Two-component response regulator n=8 Tax=Firmicutes RepID=A0PYF5_CLONN Length = 234 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 36/67 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +N K+ ++ EL + + ++ + T+ V ++ +R+ + P+ I T+ G Sbjct: 165 LVVLAQNEHKVFTKKELYENVWNQDNLEGNNTITVHVKGLRQKLKDNVKNPKYIQTVWGT 224 Query: 62 GYRFCGD 68 GY+F G+ Sbjct: 225 GYKFIGE 231 >UniRef50_A1SYE4 Two component transcriptional regulator, winged helix family protein n=4 Tax=Proteobacteria RepID=A1SYE4_PSYIN Length = 246 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ SR +LL+ + G E DRTVDV I R+R+ E +P I T G Sbjct: 174 LESLATRPKRVISREQLLEYLRGAEGDTFDRTVDVLISRLRQKLEINSRSPRYIRTERGI 233 Query: 62 GYRFCGDL 69 GY F ++ Sbjct: 234 GYSFSENV 241 >UniRef50_A0LU58 Two component transcriptional regulator, winged helix family n=16 Tax=Bacteria RepID=A0LU58_ACIC1 Length = 240 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 29/69 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ + +LL + G + + V + ++R+ E P P + T G Sbjct: 158 ILDILARHAGRLVTTRQLLHDVWGPTYRNETHYLRVYMAQLRRKLEPDPAHPRYLRTEPG 217 Query: 61 EGYRFCGDL 69 GYR + Sbjct: 218 IGYRLVVEP 226 >UniRef50_C0WE14 Two-component system transcriptional regulator n=1 Tax=Acidaminococcus sp. D21 RepID=C0WE14_9FIRM Length = 234 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P ++ SR +LL+K G + +RT+D IR +RK E P P I T++G Sbjct: 163 LDILASAPDRVFSRMQLLEKAMGGAYYEGAERTIDTHIRNLRKKLEPDPSQPIYIVTVYG 222 Query: 61 EGYRFCGDLED 71 GY+F G + Sbjct: 223 VGYKFQGANHE 233 >UniRef50_D1VIP6 Two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VIP6_9ACTO Length = 248 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ SRA++L + V+ I +RK ++ P P +I T+ G Sbjct: 184 LRFLLRNAGRAVSRAQILDHVWDYGFDGESTVVETFISSLRKKVDTAP--PTLIHTVRGV 241 Query: 62 GYRFCGD 68 GYR + Sbjct: 242 GYRLSEE 248 >UniRef50_Q04VZ3 Response regulator n=6 Tax=Leptospira RepID=Q04VZ3_LEPBJ Length = 234 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F NPG +R +LL ++ G+++ DR VDV I+R+R E + TI G Sbjct: 170 ILNLFMTNPGVAFTRDKLLDRVWGKDIYVTDRAVDVNIKRLRDKLGD---EKERLETIRG 226 Query: 61 EGYRFCG 67 GYRF Sbjct: 227 IGYRFNE 233 >UniRef50_A8DJW5 Transcriptional regulatory protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJW5_9BACT Length = 242 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ G++ +R LL ++ G + RT+DV IRR+R+ I T G Sbjct: 163 LKLLAQSKGRVLTREYLLDRVWGIDYDGETRTLDVHIRRVRQKLGIDG----YIETAVGI 218 Query: 62 GYRFCG 67 GYRF Sbjct: 219 GYRFVE 224 >UniRef50_B0CFF1 Two-component transcriptional regulator n=7 Tax=Cyanobacteria RepID=B0CFF1_ACAM1 Length = 235 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+P +I +R ++L+ + G + + ++V IR +R + P+ +I T+ G Sbjct: 170 LRYLMEHPREILTREQILENVWGFDFRGESNVIEVYIRYLRLKVQVAPEK-RLIHTVRGV 228 Query: 62 GYRFCG 67 GY Sbjct: 229 GYVLRE 234 >UniRef50_A1B7Z0 Two component transcriptional regulator, winged helix family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B7Z0_PARDP Length = 255 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG++ SR +LL R P+DR+VDV I +IR+ P I TI G Sbjct: 188 LSVLAQRPGRVLSRDQLLDLTVSRHWSPYDRSVDVMIGKIRRKIGDNGPEPRRIRTIRGT 247 Query: 62 GYRFCGDL 69 GY F + Sbjct: 248 GYMFSPEP 255 >UniRef50_B1C9W9 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9W9_9FIRM Length = 150 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P ++ + +++ + + + R V+ + +R+ +TPD+P+ I ++ Sbjct: 79 ILALLITHPKRVFTYELIMQLVWNEDYSYYSRKAVNNHVSNLRRKLRTTPDSPDYIKSVI 138 Query: 60 GEGYRFC 66 G GY+F Sbjct: 139 GVGYKFE 145 >UniRef50_D2SFJ3 Two component transcriptional regulator, winged helix family n=6 Tax=Actinomycetales RepID=D2SFJ3_9ACTO Length = 238 Score = 90.1 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ +R LL+++ G R V+V ++R+R E P+ PEI+ T+ G Sbjct: 172 LVALARKPRQVFTRELLLEQVWGYRHAADTRLVNVHVQRLRAKIERDPEKPEIVLTVRGV 231 Query: 62 GYR 64 GY+ Sbjct: 232 GYK 234 >UniRef50_B8G179 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridiales RepID=B8G179_DESHD Length = 234 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + P ++ SR LL+K+ G + RTVDV I +R +S II ++ G Sbjct: 164 LHIFMKRPNQVFSREYLLQKVWGYTVSGDTRTVDVHISNLRSKLKSVSP---IIESVRGV 220 Query: 62 GYRFC 66 GYR Sbjct: 221 GYRLA 225 >UniRef50_C4Z7A3 Two-component system, OmpR family, response regulator n=2 Tax=Eubacterium RepID=C4Z7A3_EUBE2 Length = 261 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP ++ S+ ++ + +T+DV I IRK ++ E I TI G Sbjct: 196 ILELLLKNPKQVFSKEDIFEYAWDEPYMGETKTLDVHISNIRKKIKTVTPD-EYIETIWG 254 Query: 61 EGYRF 65 GYR Sbjct: 255 IGYRL 259 >UniRef50_A9BP07 Two component transcriptional regulator, winged helix family n=14 Tax=cellular organisms RepID=A9BP07_DELAS Length = 239 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 30/67 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG+I SR LL + G++ DRTVD ++ +R + + I T G Sbjct: 172 LRCLLERPGRILSREFLLDSIWGQDSDSTDRTVDTHVKTLRAKLRAQAPQQDFITTHRGM 231 Query: 62 GYRFCGD 68 GY Sbjct: 232 GYSLTLP 238 >UniRef50_C7H3Q1 KDP operon transcriptional regulatory protein KdpE n=2 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3Q1_9FIRM Length = 143 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 36/70 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++PGK+ ++ ++ + + ++ + + R V TI RIR+ E D P I T+ Sbjct: 66 VLSLMAQHPGKLFTKEQIFEAVWHKDSESYLRAVTSTIGRIRQKIEDDKDHPRYIKTVSN 125 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 126 IGYQFVPSSE 135 >UniRef50_Q2JAC4 Two component transcriptional regulator, winged helix family n=90 Tax=cellular organisms RepID=Q2JAC4_FRASC Length = 283 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ +R ++ + VD +R +R+ PD P +I T+ G Sbjct: 187 LHLLMRHPDEVLTRTYIVDHVWDFAFDGTSNIVDQYVRYVRRKI-DIPDGPSLIETVRGV 245 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 246 GYRLRTPAE 254 >UniRef50_C9KL69 DNA-binding response regulator ArlR n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL69_9FIRM Length = 230 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + +R ++L+K+ G + VDV IR +R + I T+ G Sbjct: 166 LEYMMRNKRTVLTRDQILEKVWGYDYSGDTNVVDVYIRYLRAKL-DDRFHEKYIYTVRGV 224 Query: 62 GY 63 GY Sbjct: 225 GY 226 >UniRef50_A8ZSJ7 Two component transcriptional regulator, winged helix family n=9 Tax=Bacteria RepID=A8ZSJ7_DESOH Length = 233 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG + +R +++ K+ G DR+VDV I +RK E E I T+ G Sbjct: 167 ILSFLASRPGLVFTRWQIVDKIRGEHYAVTDRSVDVLISGLRKKLEDYG---EYIETVRG 223 Query: 61 EGYRFCGDLE 70 GYRF E Sbjct: 224 VGYRFREIEE 233 >UniRef50_Q0SQL4 Two-component response regulator n=10 Tax=Firmicutes RepID=Q0SQL4_CLOPS Length = 233 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P KI +R E+++ + G + DR +D I+ +R E P+ I T++G Sbjct: 164 ILLCLSSYPKKIFTRDEIIELVLGDKSDSFDRVIDSHIKNLRGKIEENTRKPKFIVTVYG 223 Query: 61 EGYRFCGD 68 GY+F G Sbjct: 224 VGYKFEGK 231 >UniRef50_B8H4H9 Two-component response regulator protein n=9 Tax=Proteobacteria RepID=B8H4H9_CAUCN Length = 242 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR +L + G + P VDV +RR+R P I T+ G Sbjct: 169 LELFLSSPGRVLSRERILSNVWGVDEDPLTNVVDVYVRRLRAKI-DPPLASSFITTVRGL 227 Query: 62 GYRFCGDL 69 GYR D Sbjct: 228 GYRLEPDP 235 >UniRef50_A9VUJ1 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus weihenstephanensis KBAB4 RepID=A9VUJ1_BACWK Length = 225 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN GK SR ELL ++ G + + V IRR+R+ E P P+ + T+ G Sbjct: 160 ILRCLMENQGKPISRDELLNEIWGVNYVVKTKVIGVNIRRLRQKIEPNPSGPQFLRTVWG 219 Query: 61 EGYRFC 66 +GY + Sbjct: 220 KGYVWR 225 >UniRef50_A6G9H9 Two-component response regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9H9_9DELT Length = 230 Score = 89.7 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ENP ++ SR EL +K+ + P+ R VD I R+RKH E +P P ++ G Sbjct: 164 LRYFIENPNRVLSRQELQEKVWKLDNYPNSRMVDNFILRLRKHLEPSPKEPRYFVSVRGA 223 Query: 62 GYRFCGD 68 GY+F + Sbjct: 224 GYKFVPE 230 >UniRef50_UPI0001B559F0 two-component system, response regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B559F0 Length = 247 Score = 89.7 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +AE+L+++ + R VD ++ +R+ P ++ T+ G Sbjct: 173 LACFLAHPERVLEKAEILQRVWRYDFSGDTRIVDTYVKNLRRKL-DHGGAPALLHTVRGV 231 Query: 62 GYRFCGDLED 71 GY ++ Sbjct: 232 GYCLRLPRDE 241 >UniRef50_B0C620 Two component transcriptional regulator, winged helix family n=19 Tax=Bacteria RepID=B0C620_ACAM1 Length = 226 Score = 89.7 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 1 AM-LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P ++ S+ +LL ++ G + P ++V IR +R+ F + I T+ Sbjct: 161 ILAEVLLRHPMQVMSKEQLLNRVWGYDYDPGSNIIEVYIRHLRRKFG-----SQYIETVR 215 Query: 60 GEGYRFCG 67 G GYR Sbjct: 216 GMGYRLNS 223 >UniRef50_A9KM61 Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM61_CLOPH Length = 224 Score = 89.7 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L+ ++P + ++ EL + G D T++V IR++R+ E P+ PEII TI G G Sbjct: 161 LYLFQHPNIVITKDELFANVWGDAFF-SDGTLNVHIRKLREKIEKDPNNPEIIKTIWGTG 219 Query: 63 YRFC 66 YR Sbjct: 220 YRME 223 >UniRef50_Q8ESP1 Two-component response regulator n=1 Tax=Oceanobacillus iheyensis RepID=Q8ESP1_OCEIH Length = 227 Score = 89.7 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ENP + SR ELL K+ G + DR VD I+RIRK + P + T+ G Sbjct: 164 LLLLAENPNRAFSREELLMKIWGNDYFGSDRAVDDLIKRIRKKMGNIP-----LETVWGF 218 Query: 62 GYRFCGDLE 70 GYR D E Sbjct: 219 GYRLRKDEE 227 >UniRef50_C1I3L5 Alkaline phosphatase synthesis transcriptional regulatory protein phoP n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3L5_9CLOT Length = 227 Score = 89.7 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N K+ SR +L+ + RTVD+ IRRIR T P +I T+ G Sbjct: 164 LEFFVQNRNKVFSREQLIDNIWEFSYDGDIRTVDIHIRRIRSKL-DTNGHPSVIETVFGV 222 Query: 62 GYRFC 66 GY Sbjct: 223 GYMMR 227 >UniRef50_C8X3Y5 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3Y5_DESRD Length = 236 Score = 89.7 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 38/65 (58%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+ G++ SR ELL+ + E RTVD I R+RK+FE+ P PE I ++ Sbjct: 168 VLKYLIEHEGRVVSRKELLENVWQVEGTVQTRTVDAFIARLRKYFEADPKHPEFITSVRE 227 Query: 61 EGYRF 65 GY+F Sbjct: 228 VGYQF 232 >UniRef50_A4CEI9 Transcriptional regulatory protein RstA n=3 Tax=Gammaproteobacteria RepID=A4CEI9_9GAMM Length = 245 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G +R EL++ + G + DRTVD+ + ++RK P P I T+ G+ Sbjct: 177 LWLLAERAGNTVTRDELIQALRGFDYDGFDRTVDLIVSKLRKKLNDNPSKPYRIKTVWGK 236 Query: 62 GYRFCG 67 GY Sbjct: 237 GYLLVK 242 >UniRef50_A6LVA4 Two component transcriptional regulator, winged helix family n=7 Tax=Firmicutes RepID=A6LVA4_CLOB8 Length = 234 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG++ S E+ +K+ E D TV V +R IR+ E P+ + + G Sbjct: 168 ILQLLMKNPGRVFSAEEIYEKVWNEEAINTD-TVMVHVRNIREKIEIDTKNPKYLKVVWG 226 Query: 61 EGYRFCGD 68 GY+ Sbjct: 227 VGYKIEKQ 234 >UniRef50_C8QI30 Two component transcriptional regulator, winged helix family n=1 Tax=Pantoea sp. At-9b RepID=C8QI30_9ENTR Length = 248 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + K+ +R +LL+ L DRT+DV I R+R+ E P P +I TI G Sbjct: 168 LRALVCHARKVLTRDQLLELTHSETLDVFDRTIDVLIMRLRRKIEMNPHQPSLIRTIRGL 227 Query: 62 GYRFCGDL 69 GY F D+ Sbjct: 228 GYVFSADV 235 >UniRef50_Q0ASG1 Two component transcriptional regulator, winged helix family n=15 Tax=Proteobacteria RepID=Q0ASG1_MARMM Length = 229 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++PG++ SR +LL + G ++ RTVDV + R+RK + + I T+ Sbjct: 163 LDYLMQHPGRVFSREQLLDAVWGSDVYVEARTVDVHVGRLRKALN-NKEERDPIRTVRSA 221 Query: 62 GYRFC 66 GY F Sbjct: 222 GYAFD 226 >UniRef50_C6LEL9 DNA-binding response regulator RegX3 n=3 Tax=Clostridiales RepID=C6LEL9_9FIRM Length = 234 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F EN ++ + ++L ++ + T+ V IRR+R E P I T+HG Sbjct: 159 LKYFLENKNQVLLKEQILARVWDSGGSFVEENTLMVNIRRLRTKVEEDASHPRYIKTVHG 218 Query: 61 EGYRFCGDLED 71 GY + + Sbjct: 219 MGYLWEDRPAE 229 >UniRef50_UPI0001C42B3F two component transcriptional regulator, winged helix family protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42B3F Length = 231 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E+ G++ +R LL + G + + +RTVD I+ +R + +I T+ G Sbjct: 167 LLFLFEHQGQVFTREHLLTSVWGLDYEGTERTVDTHIKTLRMKLKPYG---NVIQTVWGI 223 Query: 62 GYRFC 66 GY+ Sbjct: 224 GYKLV 228 >UniRef50_C7IFX1 Two component transcriptional regulator, winged helix family n=5 Tax=Clostridiales RepID=C7IFX1_9CLOT Length = 217 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N SR LL+ + G + + RTVDV I+++RK E + I T++ Sbjct: 154 LEVLVNNRNIALSRERLLELVWGYDFEGDTRTVDVHIQKLRKKLEWE----DRIKTVYKL 209 Query: 62 GYRFC 66 GYR Sbjct: 210 GYRLE 214 >UniRef50_Q3K1Z3 DNA-binding response regulator n=9 Tax=Bacteria RepID=Q3K1Z3_STRA1 Length = 234 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG+I ++ +L +K+ GR L+ + T+ V I IR E P+ I T+ G Sbjct: 163 ILHILMSSPGRIYTKTQLYEKINGRYLEGDETTIMVHISNIRDKIEDDSKYPKYIKTLRG 222 Query: 61 EGYRFCGD 68 GY+ Sbjct: 223 VGYKIEKP 230 >UniRef50_A6TL65 Two component transcriptional regulator, winged helix family n=6 Tax=Bacteria RepID=A6TL65_ALKMQ Length = 240 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ N G++ R E+ + + G RT+DV ++ +R+ + +I T G Sbjct: 174 ILVLLIRNKGRVFGREEIFQLVWGEPCY-DTRTIDVHVKNLREKLKDIKTKGPMIETKWG 232 Query: 61 EGYRFCGD 68 GY F D Sbjct: 233 VGYYFRKD 240 >UniRef50_B2JBG7 Two component transcriptional regulator, winged helix family n=3 Tax=Cyanobacteria RepID=B2JBG7_NOSP7 Length = 228 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +NP ++ +R+ +L K+ + + TV I +RK + + + I T++G Sbjct: 157 ILECFLKNPTQVLTRSAILDKLWEFDKLSGEETVKTHITNLRKKLRAVGSSEDFIETVYG 216 Query: 61 EGYRFCGDL 69 GYR C Sbjct: 217 IGYRLCPKE 225 >UniRef50_A1U3N6 Two component transcriptional regulator, winged helix family n=3 Tax=Gammaproteobacteria RepID=A1U3N6_MARAV Length = 242 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L +N G++ +R LL+++ G + RTVD + R+R+ P+ I TI+ G Sbjct: 161 LFLFQNQGRLLTREMLLERVWGLTRDINTRTVDTHMSRLRRRLGLNPENGFRIKTIYQRG 220 Query: 63 YRFCG 67 YR Sbjct: 221 YRLEA 225 >UniRef50_C7I0A5 Two component transcriptional regulator PhoB, winged helix family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0A5_THIIN Length = 244 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ SR LL K+ G + +RTVDV I+R+R+ E++ T+ G Sbjct: 170 LHYLMAHPERVHSRGALLDKVWGDHVFIEERTVDVHIKRLREALSPVQC-AEMVETVRGA 228 Query: 62 GYRFCGDLE 70 GYRF Sbjct: 229 GYRFTAQAR 237 >UniRef50_C1SP47 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SP47_9BACT Length = 234 Score = 89.4 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP + SR L ++TG + ++RTVD+++ R+R P +P+ I T+ G Sbjct: 163 ILSLMVRNPYILLSRDRLYNELTGFDCDAYNRTVDISVSRLRTKLNDDPKSPKYIKTVWG 222 Query: 61 EGYRFCGD 68 EGY F D Sbjct: 223 EGYMFIAD 230 >UniRef50_A9G298 Two-component response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G298_SORC5 Length = 241 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L E G++ SR ++ K+ G RT+D I ++R E TP + T+ G Sbjct: 175 VLLCLAEAGGRVLSREQIQAKVWGPTHHGTPRTIDNFILQLRNKLEENATTPRHLLTVRG 234 Query: 61 EGYRFCG 67 GYRF Sbjct: 235 VGYRFVP 241 >UniRef50_B9E984 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E984_MACCJ Length = 223 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + K+ +R +L++++ G + +RTVDV ++RIRK D+ I T+ G Sbjct: 158 LYYLVRHYPKVATREQLIEEIWGYDFDGDERTVDVHVKRIRKRL-DAFDSGVEIQTVRGV 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_C9RLA0 Two component transcriptional regulator, winged helix family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLA0_FIBSS Length = 238 Score = 89.4 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATI 58 + +F + G++ R +LL+ + G E P RT+D I +R+ E P+II +I Sbjct: 170 ILKYFWQRRGEVVLREDLLQDLWGYTPENMPSTRTIDNHIVNLRRKLEDDQANPKIILSI 229 Query: 59 HGEGYRFCG 67 G GY+F Sbjct: 230 RGAGYKFDA 238 >UniRef50_C1ZG07 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZG07_PLALI Length = 264 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +F E+ G++ SR +L + + RT+D + R+RK E P P I ++ G G Sbjct: 186 KYFIEHQGEVLSRTRILNHVWDEHAEVTTRTIDNFVLRLRKLIEPDPSKPVHILSVRGTG 245 Query: 63 YRFCG 67 YRF Sbjct: 246 YRFLP 250 >UniRef50_B6FSP5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSP5_9CLOT Length = 226 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F EN G+I +R ++L + ++ T+ V I+R+R+ E P+ P+II T+ Sbjct: 159 ILALFFENKGRILTRGQILSGIWDESGNFVNNNTLTVYIKRLREKIEEDPNAPKIIKTVR 218 Query: 60 GEGYR 64 G GY+ Sbjct: 219 GMGYK 223 >UniRef50_P54443 Uncharacterized transcriptional regulatory protein yrkP n=4 Tax=Bacillus RepID=YRKP_BACSU Length = 231 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + KI S + + + G+ + TV V IR++R E P P I T Sbjct: 163 ILKLLMNKRNKIFSAQNIYESVWGQPYFYCSNNTVMVHIRKLRSKIEDDPARPVYIKTEW 222 Query: 60 GEGYRF 65 G GYRF Sbjct: 223 GRGYRF 228 >UniRef50_A4SZ97 Two component transcriptional regulator, winged helix family n=3 Tax=cellular organisms RepID=A4SZ97_POLSQ Length = 237 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SRA LL K+ G E+ +RTVDV I+R+R I T+ G Sbjct: 168 LQFFMANPERVHSRASLLDKVWGSEVYIEERTVDVHIKRLRAALVPFDCD-RYIETVRGS 226 Query: 62 GYR 64 GYR Sbjct: 227 GYR 229 >UniRef50_Q26IA7 Transcriptional regulatory protein n=3 Tax=Bacteroidetes RepID=Q26IA7_9BACT Length = 238 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG+ SR+ELL + G ++ TV+ I R+R E P I T G Sbjct: 171 LILLANYPGRSYSRSELLDVIWGYNFSGYEHTVNSHINRLRAKIEPDMGNPIYILTTWGI 230 Query: 62 GYRFCGDL 69 GYRF D+ Sbjct: 231 GYRFNEDI 238 >UniRef50_B0G6A2 Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6A2_9FIRM Length = 85 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+PG + S E+ + + E V I ++RK + I T+ G Sbjct: 15 VLKYLTEHPGWVFSHEEIYRNVWKEEPIDCANAVMCCISQLRKKLKVDSRNWNYIRTVRG 74 Query: 61 EGYRFCG 67 GY+F Sbjct: 75 VGYKFQP 81 >UniRef50_Q2N765 DNA-binding response regulator n=8 Tax=Proteobacteria RepID=Q2N765_ERYLH Length = 248 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P K+ R LL + GRE DR VD + R+R+ E+ P I T+ G Sbjct: 173 LRAFLDHPKKVLDRDRLLDLVQGREAHLFDRAVDNQVSRLRRKIEADSRNPHFIQTVRGG 232 Query: 62 GYRFCGDL 69 GYRF D+ Sbjct: 233 GYRFAADV 240 >UniRef50_A9AYH1 Two component transcriptional regulator, winged helix family n=2 Tax=Chloroflexi RepID=A9AYH1_HERA2 Length = 238 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG+ SR LL + G+ DR+VD + R+RK D I T+ G Sbjct: 171 ILDLLLRNPGRAFSRNYLLDTIWGQSYVGGDRSVDNAMLRLRKKLADFGDA---IETVWG 227 Query: 61 EGYRFCGD 68 GYR + Sbjct: 228 LGYRLQAE 235 >UniRef50_A6M0T3 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridium RepID=A6M0T3_CLOB8 Length = 228 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ N + SR ++L K+ G RT+D I+ +R + + I TI G Sbjct: 160 LLYLVGNINTVLSREQILDKVWGYNFDGDIRTIDTHIKTLRAKL---SEQGDWIKTIRGS 216 Query: 62 GYRFCGD 68 GY F + Sbjct: 217 GYMFEVE 223 >UniRef50_A0RCN7 Two-component response regulator n=65 Tax=Bacillus RepID=A0RCN7_BACAH Length = 247 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ + E+ + + + TV V I R+R E P P+ I + G Sbjct: 181 ILYLMAAAENRVFTIEEIYESVWKERAYESNNTVMVHIARLRNKIEENPKEPKFIQNVWG 240 Query: 61 EGYRFC 66 GY+ Sbjct: 241 VGYKIE 246 >UniRef50_C2V3X6 Two component transcriptional regulator, winged helix n=4 Tax=Bacillus cereus RepID=C2V3X6_BACCE Length = 233 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 39/68 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN K SR ELL K+ G + + +DV I R+R+ E++P PE + T+ G Sbjct: 162 ILRYLMENSMKPISRNELLNKIWGINCVGNTKVIDVNINRLRQKIETSPSNPEFLLTVRG 221 Query: 61 EGYRFCGD 68 +GYR+ + Sbjct: 222 KGYRWNEN 229 >UniRef50_UPI0001C36ECD response regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36ECD Length = 226 Score = 89.0 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 33/64 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+ G+I + +L + G + TV V IR +R+ E P+ P+II T+ Sbjct: 159 LRTMMEHQGEIMDKNKLFDTVWGFDCFSEPSTVSVHIRWLREKIEDDPNEPKIIQTVWKA 218 Query: 62 GYRF 65 GYRF Sbjct: 219 GYRF 222 >UniRef50_B1Y714 Two component transcriptional regulator, winged helix family n=2 Tax=Betaproteobacteria RepID=B1Y714_LEPCP Length = 265 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P +I R++LL ++ G + +R VD+ +RR+R+ E + +I TI G Sbjct: 164 LHFFMTHPDRILGRSQLLDQVWGDHVCVEERAVDIHVRRLRRALEPSG-HAALIETIRGM 222 Query: 62 GYRFCGDL 69 GYRF + Sbjct: 223 GYRFRREE 230 >UniRef50_O78428 Probable transcriptional regulator ycf27 n=18 Tax=cellular organisms RepID=YCF27_GUITH Length = 254 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK--PHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + G+ SRA++L+++ G + R VDV I R+R E+ P P++I T Sbjct: 178 LELLISRSGQPFSRADILQEVWGYTPERHVDTRVVDVHISRLRAKLETDPSNPDLILTAR 237 Query: 60 GEGYRF 65 G GY F Sbjct: 238 GTGYLF 243 >UniRef50_D1U371 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U371_9DELT Length = 239 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENP +R EL+ GR+ +DR++DV + ++R + I T+ G Sbjct: 172 LRALMENPDTALTRDELMSLAWGRDFSAYDRSIDVHVSKLRSLLRPYAGHDKRIRTVWGT 231 Query: 62 GYRFCG 67 GY F G Sbjct: 232 GYMFVG 237 >UniRef50_C9XMT9 Two-component response regulator n=94 Tax=Bacteria RepID=C9XMT9_CLODC Length = 238 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S E+ +++ D TV V +R IR+ E P P+ + + G Sbjct: 172 ILSLLMRNAGRVFSADEIYERVWNENAINTD-TVMVHVRNIREKIEIDPKNPKYLKVVWG 230 Query: 61 EGYRFCG 67 GY+ Sbjct: 231 VGYKIEK 237 >UniRef50_Q2IGB7 Two component transcriptional regulator, winged helix family n=5 Tax=Cystobacterineae RepID=Q2IGB7_ANADE Length = 227 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 + G++ SR L++ + G+E + + VDV + +R E I ++ G GYR Sbjct: 159 LARHAGEVLSRTRLIETVWGQEFEGNSNVVDVYVGYLRTKLERLGAPGVRIESVRGVGYR 218 Query: 65 FCGDL 69 Sbjct: 219 LVVPP 223 >UniRef50_C7NK44 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NK44_KYTSD Length = 261 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +PG++ +R ELL+ + RTVDV +RR+R P+ +I T+ Sbjct: 196 LAHLATHPGRVFTREELLEDLWEGTRLSGTRTVDVHVRRLRSKLG--PEHEGLIVTVRNV 253 Query: 62 GYRFCG 67 GYR Sbjct: 254 GYRMEA 259 >UniRef50_B8G7R1 Two component transcriptional regulator, winged helix family n=3 Tax=Chloroflexus RepID=B8G7R1_CHLAD Length = 234 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ N ++ SR +L++K+ G + DR VDV + ++R+ E+ +I T G Sbjct: 161 LIALARNHNRVLSREDLIEKVWGADFYGTDRVVDVYVSQVRRKIEALTGE-NLIRTARGV 219 Query: 62 GYRFC 66 GYRF Sbjct: 220 GYRFV 224 >UniRef50_O34903 Uncharacterized transcriptional regulatory protein ykoG n=5 Tax=Bacillales RepID=YKOG_BACSU Length = 228 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ ++P ++ +R ++L + G + VDV IR IRK P ++I TI G Sbjct: 164 LVYMLKHPQQVLTREQILSSVWGFDYIGDTNVVDVYIRYIRKKL-DYPYEKQLIHTIRGV 222 Query: 62 GY 63 GY Sbjct: 223 GY 224 >UniRef50_B7ILX3 DNA-binding response regulator n=102 Tax=Firmicutes RepID=B7ILX3_BACC2 Length = 230 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++F +N G + +R +L+ ++ G E DRTV+ IR +R + I T+ Sbjct: 165 ILVYFMKNQGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGE---KAKYITTVVR 221 Query: 61 EGYRFCGDL 69 GY+F G++ Sbjct: 222 TGYKFEGNV 230 >UniRef50_A0YP32 Two-component response regulator n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YP32_9CYAN Length = 824 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ ++ +L+ + E +P++ TV I+R+R+ ++ +II T++G Sbjct: 158 LELFLRNPKRVLTQTAILEHLWSFESQPNEHTVRAHIKRLRRKLKTVNAD-KIIETVYGV 216 Query: 62 GYRFCG 67 GYR Sbjct: 217 GYRLKP 222 >UniRef50_A5UWJ8 Two component transcriptional regulator, winged helix family n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UWJ8_ROSS1 Length = 231 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ ++ LL+ + + P TV V I +R+ T I T+ G Sbjct: 157 ILSYLMRHQGEVITQEMLLEHVWDGTVNPFTNTVRVHINALRRKLRDTIAPYRYIETVVG 216 Query: 61 EGYRF 65 GYR Sbjct: 217 VGYRL 221 >UniRef50_B7CCX3 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCX3_9FIRM Length = 228 Score = 89.0 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G+ SR EL+ ++ G + RT+DV I +RK + I ++ Sbjct: 160 LKYLAKNEGRAVSREELINQIWGYDFIGESRTLDVHINSLRKKLG--NEYAHWIQSVRQV 217 Query: 62 GYRFCGDLED 71 GYR D Sbjct: 218 GYRLVSGDND 227 >UniRef50_D1CC84 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CC84_THET1 Length = 233 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N GK+ + LL ++ G E + + V I R+R+ + P+ P+ I T G Sbjct: 163 ILEQLVQNAGKVMTHQMLLNRVWGPEYTEENEYLRVYIGRLRRKLDPGPNGPKFIVTEQG 222 Query: 61 EGYRFC 66 GYRF Sbjct: 223 VGYRFV 228 >UniRef50_A5UQY1 Two component transcriptional regulator, winged helix family n=6 Tax=Chloroflexi (class) RepID=A5UQY1_ROSS1 Length = 227 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G+ SR ++L + + + VDV I +R+ ++ + + I T+ G Sbjct: 160 LEYLMRNAGQALSRQQILDHVWSYDHDVQPQMVDVYIAYLRRKLNASGER-DPIVTVRGV 218 Query: 62 GYRFCG 67 GYR Sbjct: 219 GYRLEA 224 >UniRef50_B6BN62 Two-component system response regulator n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BN62_9PROT Length = 230 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N G + SR ++L + G DR++DV I R+R P P+ ++ G Sbjct: 162 VLKLFLLNRGIVFSREQILDSVEGMNWSSGDRSIDVIISRLRTKLNDNPRDPKYFESVRG 221 Query: 61 EGYRF 65 GYR Sbjct: 222 IGYRM 226 >UniRef50_A7K1J9 DNA-binding response regulator n=13 Tax=Vibrionaceae RepID=A7K1J9_VIBSE Length = 243 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ S+ ELL + + TV TI R+R + I T+ G Sbjct: 176 LQFLATRPGRVYSKDELLDHVWNTSHSGYHHTVCSTINRLRSKLSLSDSDHHFIQTVWGV 235 Query: 62 GYRFCG 67 GY+F Sbjct: 236 GYKFQP 241 >UniRef50_C7H8D4 Two-component response regulator n=12 Tax=Bacteria RepID=C7H8D4_9FIRM Length = 299 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ N G SR ++L+K+ + DRTVD ++ +R IAT+ G Sbjct: 233 LVFLASNKGIALSREKILQKVWNYDYFGEDRTVDTHVKMLR---GHLGKCRGYIATVWGI 289 Query: 62 GYRFCGD 68 GY+F D Sbjct: 290 GYKFDPD 296 >UniRef50_B8JG70 Two component transcriptional regulator, winged helix family n=2 Tax=Cystobacterineae RepID=B8JG70_ANAD2 Length = 238 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G++ +R +LL G + DR++D I R+R P P ++ T+ G Sbjct: 168 LRVLAERAGRVLTREQLLDLTKGSADEAFDRSIDAHISRLRHKLGDDPRRPALLKTVRGA 227 Query: 62 GYRFCGDLE 70 GY E Sbjct: 228 GYVLAAGPE 236 >UniRef50_A0RK71 DNA-binding response regulator n=69 Tax=Bacillus cereus group RepID=A0RK71_BACAH Length = 232 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ + + +++ + TV V IR +RK ++I T+ G Sbjct: 166 ILYLLASHPKKVYNVENIFQQVWADDYFEGGNTVMVHIRTLRKKLGEDKRKNKLIKTVWG 225 Query: 61 EGYRFCG 67 GY F G Sbjct: 226 VGYTFNG 232 >UniRef50_A3CKZ7 Two-component response transcriptional regulator (CheY-like receiver and winged-helix DNA-binding domains), putative n=7 Tax=Firmicutes RepID=A3CKZ7_STRSV Length = 226 Score = 88.6 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 30/68 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P KI ++ EL +++ P D T++ + +RK T E I T+ G Sbjct: 159 ILQLLLRHPKKIYTKEELFEQVWEESYLPGDNTLNTHLSNLRKKLAQLDPTEEYIETVWG 218 Query: 61 EGYRFCGD 68 G R D Sbjct: 219 LGVRLKED 226 >UniRef50_C3RJ29 Response regulator gtcR n=2 Tax=Bacteria RepID=C3RJ29_9MOLU Length = 226 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+P ++ ++ L + + E D T++V I +IR + E I T+ G Sbjct: 161 LKILLESPTRVFTKDILFEMVWDHEDSGDDNTLNVHISKIRSKLKQANPNQEYIETVWGI 220 Query: 62 GYR 64 GY+ Sbjct: 221 GYK 223 >UniRef50_Q07HV3 Two component transcriptional regulator, winged helix family n=8 Tax=Proteobacteria RepID=Q07HV3_RHOP5 Length = 245 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F E P + +R +LL +GR + DRT+D + R+R+ E P P+II T+ Sbjct: 174 LVAFLERPRFVLTREQLLDITSGRSAEVFDRTIDNQVSRLRRKIEDDPAHPKIITTVRSG 233 Query: 62 GYRFCGDLED 71 GY D+ + Sbjct: 234 GYSLAADVRE 243 >UniRef50_B7JEB2 Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=9 Tax=Bacillus cereus group RepID=B7JEB2_BACC0 Length = 220 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ +N G+ S +L ++ G + TV I+ +R II T+ G Sbjct: 157 ILMLLVQNNGRTLSHEVILSRVWGYDFDGDGSTVHTHIKNLRAKLPDN-----IIKTVRG 211 Query: 61 EGYRFCG 67 GYR Sbjct: 212 VGYRLEE 218 >UniRef50_A5N716 Transcriptional regulator n=15 Tax=Firmicutes RepID=A5N716_CLOK5 Length = 237 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ PGKI +R EL+ G+ K +DRT+D I+ +R E P PE I T+ G Sbjct: 170 ILITMIRYPGKIFTREELIIVTLGQNFKGYDRTIDSHIKNLRYKIEDNPKEPEYIVTMRG 229 Query: 61 EGYRF 65 GY+F Sbjct: 230 IGYKF 234 >UniRef50_D2M1X4 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M1X4_BACS4 Length = 225 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + SR L+K + E + T+ V + R+RK S P + I T+ G Sbjct: 160 ILAVLIRNRGNVVSRTRLMKALWDDESFVDENTLTVNVNRLRKKLASLPSDDDFIKTVKG 219 Query: 61 EGYRF 65 EGYR Sbjct: 220 EGYRL 224 >UniRef50_A5VEY8 Two component transcriptional regulator, winged helix family n=7 Tax=Proteobacteria RepID=A5VEY8_SPHWW Length = 225 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ +R+ LL+ + P +D + R+R+ +I T+ G Sbjct: 158 ILEYLVRSAGRVVTRSMLLEHVWDYNFDPQTNIIDQHVSRLRQKL-DRGFDTPLIETVRG 216 Query: 61 EGY 63 GY Sbjct: 217 TGY 219 >UniRef50_Q03AM3 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=7 Tax=Lactobacillus RepID=Q03AM3_LACC3 Length = 215 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F NP +I +R +LL + RE D T+ VTI+R+R+ E P +I T+ G Sbjct: 149 LAYFFANPNQILARDQLLAALWDTREQFVADNTLTVTIKRLREKLEDDPAHTTLIRTVRG 208 Query: 61 EGY 63 GY Sbjct: 209 MGY 211 >UniRef50_C2D6V6 Possible response regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6V6_9ACTN Length = 238 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ SR +LL ++ G E RTVDV IRR+R P IAT+ G Sbjct: 175 LSFLVTHPGRAYSREKLLHQVWGFEYCGGTRTVDVHIRRVRSKVG--PQIASHIATVRGV 232 Query: 62 GYRFCG 67 GY F Sbjct: 233 GYLFKS 238 >UniRef50_B8I717 Two component transcriptional regulator, winged helix family n=7 Tax=Firmicutes RepID=B8I717_CLOCE Length = 228 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G++ +R +L+++ G E + V V +RR+R+ E P P+ I T+ G Sbjct: 158 LTLLTQNSGQVLTRDIILQRLWGTDEAFVDENAVSVNMRRLRQKIEDDPKNPKYIKTVFG 217 Query: 61 EGYRFCGD 68 GY + + Sbjct: 218 IGYTWGEE 225 >UniRef50_C8WRL6 Two component transcriptional regulator, winged helix family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL6_ALIAD Length = 221 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ N + SR ELL+++ G + VDV I +R+ + I T+ G+ Sbjct: 156 LLYLLRNVNRTCSRQELLERVWGFQAPGDTNVVDVYIGYLRQKLDP---ERRYIKTVRGQ 212 Query: 62 GYRFCGDL 69 GYR + Sbjct: 213 GYRLEVEE 220 >UniRef50_A4EGJ5 Two component transcriptional regulator, winged helix family protein n=4 Tax=Rhodobacteraceae RepID=A4EGJ5_9RHOB Length = 236 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 35/71 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +P ++ R ++L + +DR++DV + R+R II T++G Sbjct: 165 ILKMFLASPNRLIKREQILDYLGSSADDAYDRSIDVKVSRLRTKLGDDAQNARIIKTVYG 224 Query: 61 EGYRFCGDLED 71 GY F ++++ Sbjct: 225 AGYIFIAEVKE 235 >UniRef50_Q3A7S2 Putative two component response regulator n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7S2_PELCD Length = 242 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G + SR ++ + RE DR+VD+ I R+RK P P ++ TI G+ Sbjct: 177 LWYLASHAGIVVSRNDIHLALYNREYNGIDRSVDMYISRLRKKLGDCPAHPTLLKTIRGD 236 Query: 62 GYRFCG 67 GY F G Sbjct: 237 GYLFVG 242 >UniRef50_C4KB06 Two component transcriptional regulator, winged helix family n=18 Tax=Bacteria RepID=C4KB06_THASP Length = 242 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 42/69 (60%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + G++ SR +L+ + RE P+DRTVDV + R+R+ + P P +I T HG Sbjct: 174 LMALLSHAGQVLSRDQLMDAIHDREWTPNDRTVDVLVGRVRRKLDDNPADPRLILTAHGA 233 Query: 62 GYRFCGDLE 70 GY F G+L+ Sbjct: 234 GYLFAGELD 242 >UniRef50_B8FQL7 Two component transcriptional regulator, winged helix family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQL7_DESHD Length = 234 Score = 88.6 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + S L +++ G P + TV V IR +R+ E+ P P+ I T+ G Sbjct: 169 LAFLVRNRGTVFSVQNLYEQLLGESYLPSANNTVMVHIRNLRQKIEADPQHPKYILTVWG 228 Query: 61 EGYRFC 66 EGY+F Sbjct: 229 EGYKFA 234 >UniRef50_A8GAJ9 Two component transcriptional regulator, winged helix family n=54 Tax=Gammaproteobacteria RepID=A8GAJ9_SERP5 Length = 246 Score = 88.2 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 38/68 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++ K+ +R LL+ L+ DRT+DV I R+R+ E P PE+I TI G Sbjct: 172 LLALVQHARKVLTRDRLLELTHSETLEVFDRTIDVLIMRLRRKIEINPHQPELIRTIRGL 231 Query: 62 GYRFCGDL 69 GY F D+ Sbjct: 232 GYVFAADV 239 >UniRef50_Q189I8 Two-component response regulator n=5 Tax=Clostridiales RepID=Q189I8_CLOD6 Length = 229 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+ S+ +L + ++ ++ I R+R + I T+ G Sbjct: 162 IVKLLATNQGRAFSKEQLYNAIWKEPYYGNENVLNTHINRLRNKLSDGMEKNNYIKTLWG 221 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 222 IGYKMEEE 229 >UniRef50_B8DZ94 Two component transcriptional regulator, winged helix family n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8DZ94_DICTD Length = 224 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N +I S+ +++ + G E V+ I+ +RK E II TI G Sbjct: 159 ILEYLMRNVNRIISKEQIISHVWGYESDTLSNVVEAHIKNLRKKLERK-RDENIIETIRG 217 Query: 61 EGYR 64 GYR Sbjct: 218 MGYR 221 >UniRef50_A6L7N3 Two-component system response regulator n=9 Tax=Bacteroides RepID=A6L7N3_BACV8 Length = 229 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +N G++ SR ++L K+ E+ DRT+DV I R+RK + I T G Sbjct: 165 ILLLLLQNKGRVFSREDILAKVWQEEVYVLDRTIDVNITRLRKKIGEYG---KCIVTRLG 221 Query: 61 EGYRFCGD 68 GY F + Sbjct: 222 YGYCFECE 229 >UniRef50_C6JBE6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBE6_9FIRM Length = 142 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ ++A++ + + E + V I +RK E P I T+ G Sbjct: 75 LCCLATSPGRVFTKAQIFEAVWSLESESCQSNVANVICNLRKKIEPDSGKPTYIKTVLGV 134 Query: 62 GYRFCG 67 GY+F Sbjct: 135 GYKFAS 140 >UniRef50_A5G0J5 Two component transcriptional regulator, winged helix family n=36 Tax=Proteobacteria RepID=A5G0J5_ACICJ Length = 262 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + P ++ +R LL + GR+ P DR +DV I R+R+ E +II T+ G Sbjct: 192 LLALLDRPNRVLTRDMLLDLLRGRQAGPFDRAIDVAISRLRRKLEDDGRHAQIIKTVRGG 251 Query: 62 GYRFCGDLE 70 GY +E Sbjct: 252 GYVLAVPVE 260 >UniRef50_C4Z2E0 Two-component system, OmpR family, phosphate regulon response regulator OmpR n=13 Tax=Bacteria RepID=C4Z2E0_EUBE2 Length = 229 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +NP +I SR ++L+ + E + T+ V IRR+R+ E P P I I G Sbjct: 159 LTFFLQNPKQILSRTQILENVFDLEGDFVDENTIAVNIRRLREKIEDNPAAPVYIKNIRG 218 Query: 61 EGYRFCGDLE 70 GY + ++ Sbjct: 219 LGYIWNQEVR 228 >UniRef50_B4WSE4 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WSE4_9SYNE Length = 243 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 3 LHFCENPGKIQSRAELLKKMTGRE--LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 PG I SR ++L+ + G + +TVDV I R+R T P+ I TI G Sbjct: 175 ELLASRPGHIFSRGDILEALWGYDANSAADTKTVDVHISRLRIKLNETTHNPKYIVTIRG 234 Query: 61 EGYRF 65 GY F Sbjct: 235 RGYMF 239 >UniRef50_Q4HSL5 Phosphate regulon response regulator PhoB n=3 Tax=Campylobacterales RepID=Q4HSL5_CAMUP Length = 224 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N ++ SR +LL+ + G RT+D+ I+ +R+ I TI G Sbjct: 160 LGFLLKNQNRVFSRDDLLEILWGYSYSGESRTIDIHIKTLRQKLGIAS---RFIKTIRGV 216 Query: 62 GYRFCGD 68 GY+ D Sbjct: 217 GYKISKD 223 >UniRef50_Q2SHD7 Probable transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHD7_HAHCH Length = 487 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 37/69 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ENPG+ SR L++K+ ++ ++ I ++RK F + + PE I TI Sbjct: 39 VLLALAENPGRTVSRETLIQKVWNENEYVGEQALNTAIWQLRKAFNDSSEAPEYIETIPK 98 Query: 61 EGYRFCGDL 69 +GYR ++ Sbjct: 99 KGYRLLKEV 107 >UniRef50_C0BXI5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0BXI5_9CLOT Length = 237 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P ++ + ++ + + + R V+ + +RK + PD P+ I ++H Sbjct: 170 ILALLISHPRRVFTYEMIMDLVWKEDYTYYSRKAVNNHVSNLRKKLKVAPDVPDYIKSVH 229 Query: 60 GEGYRFCG 67 GY+F Sbjct: 230 SVGYKFMP 237 >UniRef50_Q3KAS5 Two-component system, response regulator n=2 Tax=Proteobacteria RepID=Q3KAS5_PSEPF Length = 235 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + GKI SR ++L +M G +R+VDV I ++R + P P I T+ G+ Sbjct: 165 LWLLASAAGKILSRDDILNRMRGIAFDGLNRSVDVYISKLRNKLKDNPREPVCIKTVWGK 224 Query: 62 GYRFCG 67 GY F Sbjct: 225 GYLFNP 230 >UniRef50_C7H3P4 DNA-binding response regulator SrrA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3P4_9FIRM Length = 232 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ ++ + + + D ++V I +RK F + I T+ G Sbjct: 166 ILQLLMSSPSKVFTKNNIFESVWNENFVGDDNAINVHIGNLRKKFAKVNPEEKYIQTVWG 225 Query: 61 EGYRFCG 67 G++ G Sbjct: 226 LGFKMQG 232 >UniRef50_A4FNN5 Response regulator, two-component system n=12 Tax=Actinomycetales RepID=A4FNN5_SACEN Length = 237 Score = 88.2 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPD--TPEIIATIH 59 + ++ G++ +R E+L+++ + +T+D+ I +R+ + + IAT+ Sbjct: 169 LRVLMQHAGQVVTREEILEEVWPEPSRKGSKTLDMHISWLRRKLGDSNGRFDDQRIATVR 228 Query: 60 GEGYRFCGD 68 G G+RF D Sbjct: 229 GVGFRFNAD 237 >UniRef50_B8FLX7 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=B8FLX7_DESAA Length = 235 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 39/67 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PGK+ SR EL+ K+ GR + +DR +D I+ +RK + E I +++G Sbjct: 168 LHAFMAHPGKVFSRDELIAKIQGRTYEGYDRNIDWHIKNLRKKLIAAQPGLEPIESVYGV 227 Query: 62 GYRFCGD 68 GY+F + Sbjct: 228 GYKFILE 234 >UniRef50_A6TT79 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiales RepID=A6TT79_ALKMQ Length = 232 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N GK+ SR EL+ K+ G + +DRT+DV I+ +R E + + I T++G Sbjct: 166 LSIFIQNSGKVFSRDELVVKVLGYDYVGYDRTIDVHIKNLRHKIE--CEYYKYIVTVYGV 223 Query: 62 GYRFCG 67 GYRF Sbjct: 224 GYRFVK 229 >UniRef50_Q52990 Phosphate regulon transcriptional regulatory protein phoB n=193 Tax=cellular organisms RepID=PHOB_RHIME Length = 227 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR++LL + G ++ +RTVDV + R+RK + P++I T+ G Sbjct: 163 LEFLMSSPGRVFSRSQLLDGVWGHDIYVDERTVDVHVGRLRKALN-FSNMPDVIRTVRGA 221 Query: 62 GYRFCG 67 GY Sbjct: 222 GYSLES 227 >UniRef50_C7LY45 Two component transcriptional regulator, winged helix family n=2 Tax=Actinobacteria (class) RepID=C7LY45_ACIFD Length = 236 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + + +++ + + + V+V I +RK P + I TI G Sbjct: 158 LELLLRNKGHVLRKQDIIAHVWDYDFEGDSNIVEVYIGYLRKKI-DVPFGTKAITTIRGV 216 Query: 62 GYRFCGD 68 GYR D Sbjct: 217 GYRLEED 223 >UniRef50_A7GEN9 DNA-binding response regulator n=18 Tax=Firmicutes RepID=A7GEN9_CLOBL Length = 229 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S+ ++ +K+ G + + TV I++IR F + IAT+ G Sbjct: 160 IVELLALHPEQVFSKEQIYEKVWGYDAEGDANTVAEHIKKIRAKFIKRNASLNHIATVWG 219 Query: 61 EGYRFC 66 GYR+ Sbjct: 220 VGYRWE 225 >UniRef50_Q030C5 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=6 Tax=Lactococcus lactis RepID=Q030C5_LACLS Length = 234 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E+ G+I SR ++L+++ G TVD +R +RK + +I TI G Sbjct: 172 LLFLFEHQGEIISRDDILEEVWGMNFGGQLNTVDTYVRYLRKKLDKN-----MIETIRGL 226 Query: 62 GYRFCGD 68 GYR D Sbjct: 227 GYRLNKD 233 >UniRef50_Q1GXN5 Two component transcriptional regulator, winged helix family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXN5_METFK Length = 241 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 36/70 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+P + SR L++ + G+E DR++DV I R+R H E+ P II T+ Sbjct: 169 VLRALLEHPNRPLSRDFLVEHVYGKESHAMDRSIDVCISRLRHHIEADTRNPTIIRTVRN 228 Query: 61 EGYRFCGDLE 70 GY ++ Sbjct: 229 AGYMLASQVK 238 >UniRef50_Q1NA75 DNA-binding response regulator n=3 Tax=Alphaproteobacteria RepID=Q1NA75_9SPHN Length = 236 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + ++ G++ +R LL+ + P VDV + R+R+ E DTP + T+ G G Sbjct: 166 RYLMDHAGEVVTREMLLRHVWKLSFDPQTNVVDVNVGRLRRKLEEGFDTPVL-ETVWGTG 224 Query: 63 YRFCGDLE 70 YR + Sbjct: 225 YRLIARAD 232 >UniRef50_C6NV64 Two component transcriptional regulator, winged helix family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NV64_9GAMM Length = 247 Score = 88.2 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 36/70 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F + P + SR LL+ + G + DR++DV + R+RK E P P + T G Sbjct: 160 LLVFAQRPNRALSRDHLLQALGGDDDGRFDRSIDVRVTRLRKLIEENPRQPRFLRTERGV 219 Query: 62 GYRFCGDLED 71 GYRF + Sbjct: 220 GYRFVPRENE 229 >UniRef50_B4WSX3 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WSX3_9SYNE Length = 640 Score = 87.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ S ++ + E P + V ++ +R+ ++ + I T++G Sbjct: 184 LELFLRHPNQVFSIDAIIDNLWSFEDPPSEDAVRTHVKGLRQKLKAGGAPKDFIQTVYGL 243 Query: 62 GYRFCG 67 GYR Sbjct: 244 GYRLKA 249 >UniRef50_C4LLE8 Two-component system, response regulator n=19 Tax=Corynebacterium RepID=C4LLE8_CORK4 Length = 268 Score = 87.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG++ +R +L+ ++ +R VDV I +R+ + I T+ G Sbjct: 202 LVALALRPGQVLTRHDLVTEVWDTTWVGDERIVDVHIGNLRRKLGTDTRGRGFIDTVRGV 261 Query: 62 GYR 64 GYR Sbjct: 262 GYR 264 >UniRef50_C5ENX8 Two-component response regulator n=2 Tax=Clostridiales RepID=C5ENX8_9FIRM Length = 233 Score = 87.8 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F N I +R +LL + G + + RTVD IRR+R+ E I T G Sbjct: 170 LRYFLNNQRIILTREQLLNHVWGMDFEGDSRTVDTHIRRLRRKIGE-----EYIKTRIGI 224 Query: 62 GY 63 GY Sbjct: 225 GY 226 >UniRef50_C0ZDC3 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDC3_BREBN Length = 231 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N + SR ++L + G + + VDV IR +R ES P ++I T+ G Sbjct: 167 LYYMVQNKEQAVSREQILTAVWGFDFMGNTNIVDVYIRYLRNKIESDPS-VKLIHTVRGI 225 Query: 62 GYRFC 66 GY Sbjct: 226 GYTLR 230 >UniRef50_B0TXI9 Response regulator receiver protein n=14 Tax=Francisella RepID=B0TXI9_FRAP2 Length = 229 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ ++ S+ +LK++ + P V+V I R+R P+ I TI G Sbjct: 164 VLHLLLKHKNEVVSKTMILKEVWDYDFDPQTNVVEVHISRLRNKLTENGL-PDPIKTIRG 222 Query: 61 EGY 63 GY Sbjct: 223 FGY 225 >UniRef50_B1QW07 Regulatory protein VanR n=6 Tax=Clostridiales RepID=B1QW07_CLOBU Length = 235 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + N KI S + + D + V I+ +RK E P P+ I T Sbjct: 169 ILELLALNRKKIFSMENIYSSIWNDSYIGASDNAIMVHIKNLRKKIEKNPKEPKYIKTSW 228 Query: 60 GEGY 63 G GY Sbjct: 229 GRGY 232 >UniRef50_D0WIB8 DNA-binding response regulator VicR n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WIB8_9ACTN Length = 244 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ ++ ++ ++ G E V V I ++R P IAT+ G Sbjct: 181 LSLFMSHPGRVFTKQQIFEEGWGEEYVASGNNVMVGISKLRAKLSDDPGA--YIATVRGL 238 Query: 62 GYRFCG 67 GYR Sbjct: 239 GYRMEA 244 >UniRef50_C6CWW2 Two component transcriptional regulator, winged helix family n=2 Tax=Paenibacillus RepID=C6CWW2_PAESJ Length = 239 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ + PG + +R +L+ + G + RTVDV + +RK E I +I G Sbjct: 166 VLLYLVQRPGMVITRDDLMNVVWGFDYIGGQRTVDVHVSSLRKKLEL--GQSVQIESIRG 223 Query: 61 EGYRFC 66 GY+ Sbjct: 224 VGYKLV 229 >UniRef50_A5N8U3 Transcriptional regulator n=3 Tax=Clostridium RepID=A5N8U3_CLOK5 Length = 229 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S L + + +D TV + I+ +R+ + + I TI G Sbjct: 161 ILYTLAYNRGRVYSTKILYEMLWKDNFMQNDNTVTMHIKNLREKLGDSVKQGKYIKTIWG 220 Query: 61 EGYRFCGDL 69 GY+ ++ Sbjct: 221 VGYKIEKNI 229 >UniRef50_Q6F7B5 Two-component response regulator n=55 Tax=Bacteria RepID=Q6F7B5_ACIAD Length = 254 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 35/71 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++P + +R +L+ GRE +R++DV + R+R+ E P I T+ G Sbjct: 184 VLKALVQHPREPLTRDKLMNLARGREWGAMERSIDVQVSRLRRLIEDNPARARYIQTVWG 243 Query: 61 EGYRFCGDLED 71 GY F D + Sbjct: 244 IGYVFVPDGAE 254 >UniRef50_P45189 Phosphate regulon transcriptional regulatory protein phoB n=18 Tax=Pasteurellaceae RepID=PHOB_HAEIN Length = 231 Score = 87.8 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P K+ SR +LL ++ +L+ RTVD IRR+R++ I T+ G Sbjct: 161 LHFFMRHPEKVYSREQLLNRIWHNDLEVEYRTVDSYIRRLRRNLAPFQCE-HYIQTVRGS 219 Query: 62 GYRFCGDLED 71 GYRF L D Sbjct: 220 GYRFSSYLRD 229 >UniRef50_B8DS40 Two component transcriptional regulator, winged helix family n=29 Tax=Proteobacteria RepID=B8DS40_DESVM Length = 275 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + P ++ SR +LL GR + DR++DV + R+R P+II T+ G+ Sbjct: 173 LRFFLKYPNRVMSRDQLLDLTQGRAAEAFDRSIDVLVSRLRTRLRDNGREPQIIKTVRGD 232 Query: 62 GYRFCGDLE 70 GY D+E Sbjct: 233 GYYLATDVE 241 >UniRef50_A6WIX6 Two component transcriptional regulator, winged helix family n=3 Tax=Bacteria RepID=A6WIX6_SHEB8 Length = 227 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKH---FESTPDTPEIIATI 58 + H +P ++ +R +LL+ + G + P VDV I+RIR E I +I Sbjct: 158 LEHLMRSPNQVLTRGQLLEHVWGYDFDPCTNVVDVCIKRIRSKMASLEKAGKMVGAIESI 217 Query: 59 HGEGYRF 65 G GYR Sbjct: 218 RGTGYRL 224 >UniRef50_B8HEE3 Two component transcriptional regulator, winged helix family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HEE3_ARTCA Length = 265 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F P ++ ++ LL+++ G E + V+V I +R+ + +II T+ G Sbjct: 195 LAAFMGAPRRVWTKESLLRRVWGDEWATDEHLVEVHIGNLRRKIRAGGSEAQIIRTVRGV 254 Query: 62 GYRFCGD 68 GY Sbjct: 255 GYGLVPP 261 >UniRef50_B2V706 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=B2V706_SULSY Length = 224 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ +R +L DRTVDV I RIRK P P+ I ++ G Sbjct: 159 LSMLIKNKGRVLTRDYILDNSIYLNYDSIDRTVDVIIGRIRKKIGDDPKNPKYIISVRGF 218 Query: 62 GYRFC 66 GY+F Sbjct: 219 GYKFE 223 >UniRef50_C7LNV6 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNV6_DESBD Length = 229 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +PG+ +R + + G L H R VDV ++R+RK E P P II T+ G Sbjct: 161 LELFVAHPGETLTRDFIQSQNWGDSKLYSHSRAVDVHVQRLRKKIEENPQAPRIILTVAG 220 Query: 61 EGYRFCGDL 69 GYRF + Sbjct: 221 VGYRFEPNP 229 >UniRef50_B8HDW6 Two component transcriptional regulator, winged helix family n=21 Tax=Bacteria RepID=B8HDW6_ARTCA Length = 232 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F EN GK+ SR +LL ++ G + VDV + +R PE ++ G G Sbjct: 161 RVFVENSGKLLSREQLLSRVWGYDFDGSSNVVDVYVGYLRTKLG-----PEHFQSVRGAG 215 Query: 63 YRFCG 67 YRF Sbjct: 216 YRFTP 220 >UniRef50_UPI0001C35F78 two-component response regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35F78 Length = 244 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 +L EN K + ++ + + + TV V IR +RK E P P I + Sbjct: 178 ILLLLAENRKKTYTTQDIYEAVWNEPFLFSSNNTVMVHIRNLRKKLEDDPQNPRCIRNVW 237 Query: 60 GEGYR 64 G+GYR Sbjct: 238 GKGYR 242 >UniRef50_A6CG62 Two-component response regulator n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CG62_9PLAN Length = 244 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F E+ G + +R+++L+ + G RT+D + R+RK E+ P P I ++ G Sbjct: 173 LKYFIEHEGMVLTRSQILEDVWGEQSAFVTTRTIDNFVLRLRKLVEANPAEPVHIVSVRG 232 Query: 61 EGYRFCGDL 69 GYRF + Sbjct: 233 AGYRFMPED 241 >UniRef50_P0A5Z5 DNA-binding response regulator mtrA n=76 Tax=Bacteria RepID=MTRA_MYCBO Length = 225 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 34/63 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ +R LL+++ G R V+V ++R+R E P+ P ++ T+ G Sbjct: 159 LVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGV 218 Query: 62 GYR 64 GY+ Sbjct: 219 GYK 221 >UniRef50_Q9KAM3 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9KAM3_BACHD Length = 231 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG+ +R +LL R+++ +DR VD I+ IR E +I T+ G Sbjct: 159 VLHRLLSNPGRTYTREQLLDLAWDRQVEIYDRNVDAHIKNIRDKLEKVGADSTVIQTVWG 218 Query: 61 EGYRFCG 67 GY++ Sbjct: 219 VGYKYVE 225 >UniRef50_A9KP45 Two component transcriptional regulator, winged helix family n=15 Tax=Bacteria RepID=A9KP45_CLOPH Length = 224 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F N G SR ++L + + RT+D ++++R + I TI G Sbjct: 161 LTYFITNRGVALSREKILNNVWNYDYFGDARTIDTHVKKLRSKMGD---KGDYIKTIWGM 217 Query: 62 GYRFC 66 GY+F Sbjct: 218 GYKFE 222 >UniRef50_C5VNC3 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VNC3_CLOBO Length = 231 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 31/64 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F EN G SR +LL G + VDV IRR+R E P P+ + T+ G Sbjct: 165 LKIFIENIGISLSRDKLLDLAWGYNFVGDPKIVDVNIRRLRSKLEDDPSYPKYLQTVWGT 224 Query: 62 GYRF 65 GY + Sbjct: 225 GYIW 228 >UniRef50_Q3B3K7 Two component transcriptional regulator, winged helix family n=9 Tax=Bacteroidetes/Chlorobi group RepID=Q3B3K7_PELLD Length = 232 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N ++ +R+ +++ + +DV + +R+ E+ T +I T+ G Sbjct: 157 LEYLLRNLDRVCTRSRIIEHVWDIHFDADTSVIDVYVNFLRRKLEAAGCTG-LIKTVRGV 215 Query: 62 GYRFCGDLED 71 GY + Sbjct: 216 GYVIRTPEAN 225 >UniRef50_C9RRV7 Two component transcriptional regulator, winged helix family n=16 Tax=Bacteria RepID=C9RRV7_FIBSS Length = 225 Score = 87.8 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG + SR ++L+K+ G + RTVD+ ++ +R+ + I+ T+ Sbjct: 164 LKLLMSRPGTVFSRQQILEKIWGVDFDMDTRTVDMHVKTLRQKLGAHGS---IVQTVRNV 220 Query: 62 GYR 64 GY+ Sbjct: 221 GYK 223 >UniRef50_UPI0001C37170 two component transcriptional regulator, winged helix family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37170 Length = 262 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+ R +L ++ G + DR VD I+++RK S I T+ G Sbjct: 199 ILRYLMEHQDWTIDRDTILNRVWGYDYFGSDRVVDSHIKKLRKALGSAGKQ---IKTVVG 255 Query: 61 EGYRFCG 67 GYR Sbjct: 256 RGYRLSK 262 >UniRef50_B1VZK5 Putative transcriptional regulator n=8 Tax=Streptomyces RepID=B1VZK5_STRGG Length = 220 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +P ++ +R +L+ + G RTVDV + R+R+ + + I T+ Sbjct: 157 LSHLVAHPHRVHTRDQLVTTVWGYGHVGDGRTVDVHVARLRRKLGA--EYRRSIQTVRRV 214 Query: 62 GYRFCG 67 GY++ Sbjct: 215 GYKYTP 220 >UniRef50_D2MMT6 Putative regulatory protein VanR n=1 Tax=Bulleidia extructa W1219 RepID=D2MMT6_9FIRM Length = 232 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +NP K+ + ++ +++ E + T+ V IR +R+ E P P I + G Sbjct: 162 ILKYFIQNPKKLLTSQDIYQEVWKEEPIGSESTIAVHIRHLREKIEIDPSHPRYIKVVWG 221 Query: 61 EGYRFCGDLE 70 GY+ D E Sbjct: 222 RGYKAESDYE 231 >UniRef50_Q01RB2 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01RB2_SOLUE Length = 242 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ +R L+ + G E T+DV IR++R E T +++ T+ G Sbjct: 173 ILEILMRSSGRVITRTRLIDAVWGHERDVQSNTLDVFIRQLRTKIEPAGTT-KLLHTVRG 231 Query: 61 EGYRFCGDL 69 GY + Sbjct: 232 IGYTLREEE 240 >UniRef50_A4E8P8 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E8P8_9ACTN Length = 220 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P + SR LL ++ G E RTVDV IRRIR P I T+ G Sbjct: 157 LSFLATHPNRAYSREVLLHRVWGFEYCGGTRTVDVHIRRIRSKVG--PQIAAHITTVRGV 214 Query: 62 GYRF 65 GY F Sbjct: 215 GYLF 218 >UniRef50_C0Z5U8 Two-component response regulator n=3 Tax=Firmicutes RepID=C0Z5U8_BREBN Length = 261 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ ++PG + SR +LL+++ G + RT+DV I++IR+ + P + I T+ G Sbjct: 196 LVQLVKSPGSVWSREQLLEQVWGFDYFGDVRTIDVHIKKIRQRLDKLPY--DCIQTVWGI 253 Query: 62 GYRF 65 GY+F Sbjct: 254 GYKF 257 >UniRef50_A9H3V0 Two component Transcriptional regulator n=96 Tax=Proteobacteria RepID=A9H3V0_GLUDA Length = 258 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + P ++ +R LL+ + P VDV I ++R+ P +I +I G Sbjct: 192 LEYLMRRPNQVLTRTMLLEDVWNYRFIPQTNLVDVHIGKLRRKI-DDPGAQPLIQSIRGT 250 Query: 62 GYRFCGDL 69 G+ Sbjct: 251 GFMLRVPE 258 >UniRef50_UPI0001C355EA transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355EA Length = 234 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ ++ ++ + ++ +V+ I R+RK E P I TI G Sbjct: 164 LYYLASNQGQVINKEQIYYHLWKEDIGVGSNSVETLIMRLRKKLEPDKSDPIFIETIRGG 223 Query: 62 GYRFCGD 68 GYRF + Sbjct: 224 GYRFKLE 230 >UniRef50_D1VK99 Putative two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VK99_9ACTO Length = 196 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 6/71 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHD----RTVDVTIRRIRKHFESTPDTPEIIA 56 + +PG++ SRA LL+ + G + RTVDV + R+R+ I Sbjct: 121 VLDFLVRHPGRVYSRAALLRHVWGHRVDDDPGQAGRTVDVLVTRLRRKLGPD--NRSRIE 178 Query: 57 TIHGEGYRFCG 67 T+ GYR+ Sbjct: 179 TVRRVGYRYRP 189 >UniRef50_C5CE19 Two component transcriptional regulator, winged helix family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CE19_KOSOT Length = 228 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NPG + SR ++L K+ +P VDV + +RK + + I T+H Sbjct: 159 LELFMRNPGVVFSREQILDKLWESGFEPRSNIVDVYVLYLRKKLKPFGYDEK-IETVHNI 217 Query: 62 GYRFCGDLE 70 GYR + + Sbjct: 218 GYRLKKEDD 226 >UniRef50_C8PDN3 DNA-binding response regulator n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDN3_9LACO Length = 237 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ SR +LL+ + G E RT+D ++ +R+ E P +I T+ G Sbjct: 168 ILTILASSPTQVFSRKKLLELVWGNEYFGDARTIDTHVKTLRQKLEKVG--PHVIITVWG 225 Query: 61 EGYRFCG 67 GY++ Sbjct: 226 VGYKYDE 232 >UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GQ2_SACD2 Length = 425 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++ EN ++ SR EL +K+ T+ I+ RK + I T+ G Sbjct: 33 IIVYLIENRNRLVSRDELFEKIWDARAVSDT-TLSNHIKSARKALGDDGEQQHTIKTVRG 91 Query: 61 EGYRFCGDL 69 GY+F ++ Sbjct: 92 RGYQFIAEV 100 >UniRef50_Q3AVF0 Response regulator receiver domain protein (CheY-like) n=2 Tax=Synechococcus RepID=Q3AVF0_SYNS9 Length = 227 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ++ G++ SR +LL+++ E V+V +R +R+ E+ ++ T+ G Sbjct: 158 LLTLLQHQGRVLSRDQLLQQVWQDERASSGNVVEVYVRYLRQKLEAEG-EGRLLHTVRGR 216 Query: 62 GYRFCG 67 GY Sbjct: 217 GYCLGP 222 >UniRef50_A9ASF4 Two component transcriptional regulator, winged helix family n=3 Tax=Burkholderia RepID=A9ASF4_BURM1 Length = 253 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F PG++ SR +LL+ + +DR++DV I R+R+ E P P I T+ G Sbjct: 172 LNAFLAAPGRVLSRDQLLESSRLYD-DVYDRSIDVQILRLRRKIEPDPSHPVFIRTVRGA 230 Query: 62 GYRFCGDL 69 GY + Sbjct: 231 GYVLDVPV 238 >UniRef50_C9L5Y5 Regulatory protein VanR n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5Y5_RUMHA Length = 299 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + CE G + S EL ++ E + T+ V IR +R+ E + + P+ I T+ Sbjct: 232 ILAILCEQKGNVVSAEELFHQIWKDEYYSKSNNTITVHIRHLREKMEDSFENPKYIKTVW 291 Query: 60 GEGYRFCG 67 G GY+ Sbjct: 292 GCGYKIEK 299 >UniRef50_Q1AXX7 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AXX7_RUBXD Length = 231 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG+ +RA++ + ++ R +DV I R+R E P PEII T+ Sbjct: 162 ILALLLRRPGQAFTRAQISEAVSTGSHYLASRYIDVHISRLRSKIERDPSRPEIIQTVPS 221 Query: 61 EGYR 64 GYR Sbjct: 222 VGYR 225 >UniRef50_Q0F0D6 Response regulator in two-component regulatory system with PhoR (Or CreC), regulates pho regulon (OmpR family) protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0D6_9PROT Length = 254 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PGK +SR LL + G ++ RTVDVT++R+RK + + T+ G Sbjct: 185 LQMLMKKPGKTRSRDYLLDHVWGNDVYVEPRTVDVTVKRLRKALKELGRK-NCVETVRGM 243 Query: 62 GYRFCGDLE 70 GYRF E Sbjct: 244 GYRFLPPSE 252 >UniRef50_Q44006 Transcriptional activator protein czcR n=330 Tax=cellular organisms RepID=CZCR_RALME Length = 225 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ SR + ++ G VDV IRR+R P ++I T+ G Sbjct: 157 LHLLMRRRGEVLSRTTIASQVWGVNFDTDTNVVDVAIRRLRSKV-DDPFDQKLIHTVRGM 215 Query: 62 GYRFCGD 68 GY + Sbjct: 216 GYVLDPE 222 >UniRef50_B9CKZ5 Transcriptional regulator domain protein n=2 Tax=Atopobium RepID=B9CKZ5_9ACTN Length = 224 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P + SR LL+++ G E RTVDV +RR+R P I T+ G Sbjct: 161 LAFLANHPSRAYSREVLLQRVWGFEYCGGTRTVDVHVRRVRSKIG--PQAAAHIETVRGV 218 Query: 62 GYRFC 66 GY F Sbjct: 219 GYLFR 223 >UniRef50_B9L1T3 Phosphate regulatory protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1T3_THERP Length = 253 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G++ +R ELL + G++ R VDV I RIR+ PD +I T+HG Sbjct: 176 LTALVERAGRVCTRQELLDLVWGQD-VVDLRNVDVHIHRIREALGGEPDGSNLIRTVHGI 234 Query: 62 GYRFCGD 68 GYRF + Sbjct: 235 GYRFVPE 241 >UniRef50_UPI00016B25CE two component transcriptional regulator, winged helix family protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25CE Length = 224 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ G+ S+ ++++ + + TV+ I+ +RK + I T+ G Sbjct: 160 LQYLMKSSGQTLSKEQIMEHVWNFDADILPNTVEAYIKALRKKI-DEKYKVKYIKTVRGI 218 Query: 62 GYRFCG 67 GYR Sbjct: 219 GYRLEE 224 >UniRef50_Q21BK9 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BK9_RHOPB Length = 242 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 41/68 (60%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+I SR +LL M+ RE +DRTVDV + R+R+ E+ P P+II T +G Sbjct: 174 LAALVRHPGRIMSRNDLLDVMSSREWDSNDRTVDVLVGRLRRKIEADPGKPQIIVTEYGL 233 Query: 62 GYRFCGDL 69 GY F + Sbjct: 234 GYVFAEKV 241 >UniRef50_C9YCY7 Transcriptional regulatory protein ompR n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCY7_9BURK Length = 248 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 39/68 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+ G+ RA L+++ GR+L P DR++DV + R+R+ P +I T+ G Sbjct: 175 LRFFAEHAGETLDRARLMEQTRGRDLGPLDRSLDVQVSRLRQRLHDDGKQPVLIKTVRGS 234 Query: 62 GYRFCGDL 69 GY F D+ Sbjct: 235 GYVFSADV 242 >UniRef50_P51358 Probable transcriptional regulator ycf27 n=96 Tax=cellular organisms RepID=YCF27_PORPU Length = 243 Score = 87.4 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + G+ SRA +L+++ G E R VDV I R+R E P P++I T Sbjct: 169 LELLVSKAGEPFSRASILQEVWGYTPERHVDTRVVDVHISRLRAKLEDDPSNPDLILTAR 228 Query: 60 GEGYRF 65 G GY F Sbjct: 229 GTGYLF 234 >UniRef50_A1ULT5 Two component transcriptional regulator, winged helix family n=5 Tax=Corynebacterineae RepID=A1ULT5_MYCSK Length = 247 Score = 87.0 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ E G++ S E+ + + G TV V +RR+R+ P E I TI G Sbjct: 180 LVYLIERHGRVASSDEISRAVWG--HPADTNTVAVHVRRLREKLGHDPQHGEFIRTIRGA 237 Query: 62 GYRFCG 67 GYR Sbjct: 238 GYRLAP 243 >UniRef50_Q251C7 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q251C7_DESHY Length = 231 Score = 87.0 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PGK+ +R +L+ + G+E + ++ V IRRIR+ E P P ++ T+ Sbjct: 165 IIALMANHPGKVFTREDLIDCIWGKEFETGSISIPVYIRRIREKIEQDPSEPTLLKTVWR 224 Query: 61 EGYRF 65 GY+ Sbjct: 225 FGYKL 229 >UniRef50_Q06239 Regulatory protein vanR n=26 Tax=Firmicutes RepID=VANR_ENTFC Length = 231 Score = 87.0 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + CEN G + S L ++ G E + T+ V IR +R+ T D P+ I T+ Sbjct: 164 ILRILCENKGNVVSSELLFHEIWGDEYFSKSNNTITVHIRHLREKMNDTIDNPKYIKTVW 223 Query: 60 GEGYRFCG 67 G GY+ Sbjct: 224 GVGYKIEK 231 >UniRef50_B2IIX2 Two component transcriptional regulator, winged helix family n=3 Tax=Proteobacteria RepID=B2IIX2_BEII9 Length = 237 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F E+ ++ +R +LL G DR++DV + R+R E P P +I T+ Sbjct: 167 LLAFAEHSQRVLTRDQLLDLARGLSHAAFDRSIDVQVSRLRHKLEDDPKKPSVIRTVRNG 226 Query: 62 GYRFCGDL 69 GY F + Sbjct: 227 GYIFTPVV 234 >UniRef50_P35163 Transcriptional regulatory protein resD n=162 Tax=Bacteria RepID=RESD_BACSU Length = 240 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFES-TPDTPEIIATIHG 60 + + P K+ R +LLK++ E RTVD ++R+R+ +P+ + I T+ G Sbjct: 171 LYFLAKTPDKVYDREKLLKEVWQYEFFGDLRTVDTHVKRLREKLNKVSPEAAKKIVTVWG 230 Query: 61 EGYRFCGDLE 70 GY+F E Sbjct: 231 VGYKFEVGAE 240 >UniRef50_C8WJL3 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJL3_EGGLE Length = 234 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +PG++ ++A+L + ++ + ++ V I IR E P+ P I T+ G Sbjct: 168 IFSKLFSSPGRVYTKAQLYELISASSHGGGEDSIMVHISNIRSKIEDDPNNPAHIVTVRG 227 Query: 61 EGYRFCG 67 GYRF G Sbjct: 228 LGYRFEG 234 >UniRef50_C3WCS3 Two-component system response regulator n=4 Tax=Bacteria RepID=C3WCS3_FUSMR Length = 223 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N SR +LL ++ G + DRT+D I+ +RK I TI G Sbjct: 163 LVYLIKNNKIALSREKLLNEVWGYDFLGDDRTIDTHIKNLRKKIGKNA-----IKTIRGI 217 Query: 62 GYRFC 66 GY+ Sbjct: 218 GYKLD 222 >UniRef50_B1ZTF3 Two component transcriptional regulator, winged helix family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTF3_OPITP Length = 269 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 29/65 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ SR LL+ + G P R+VD + R+R+ T P I ++ G Sbjct: 187 LDLLVHARGRAVSRERLLRAIWGNVNPPASRSVDTHVWRLRRKIGDTGHEPHWIKSVPGV 246 Query: 62 GYRFC 66 GY+ Sbjct: 247 GYQLE 251 >UniRef50_C4FAP3 Putative uncharacterized protein n=3 Tax=Bacteria RepID=C4FAP3_9ACTN Length = 258 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG++ R + + + G + V +RRIR + + I T+ G Sbjct: 191 IVALLSKRPGQVFDRDAIYEHVWGWDAAGDPSQVREHVRRIRNKLAAAGVAEDPIETVWG 250 Query: 61 EGYRFCGD 68 GY++ Sbjct: 251 VGYKWVAK 258 >UniRef50_Q3MGM2 Sensor protein n=22 Tax=Bacteria RepID=Q3MGM2_ANAVT Length = 1629 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 32/70 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + ++ S + +L+ + E P + V I+ +R + +++ T++G Sbjct: 158 LELFLRHSRRVFSCSMILEHIWSYEDTPGEEAVRTHIKGLRMKLRNAGAPGDLVETVYGI 217 Query: 62 GYRFCGDLED 71 GYR E+ Sbjct: 218 GYRLKAQEEE 227 >UniRef50_C0BVZ7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BVZ7_9CLOT Length = 225 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F NPGK + + + G + +T+ V I+ +R E P P+ I T+ G Sbjct: 159 LLLFVRNPGKTLRKEYIFGNVWGTDSFSESQTLTVHIKMLRAKIEENPREPKRILTVWGV 218 Query: 62 GYRFCG 67 GYR+ Sbjct: 219 GYRYEE 224 >UniRef50_Q46TX9 Response regulator receiver:Transcriptional regulatory protein, C-terminal n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46TX9_RALEJ Length = 231 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +PG I S++ L + + ++ T++V + R+R+ +I T+ G Sbjct: 164 VLDYLMHHPGAIVSKSTLTEHIYAQDFDRDSNTIEVFVGRLRRKLGVD-----VIETVRG 218 Query: 61 EGYRFCGDL 69 +GYR Sbjct: 219 QGYRLRPPP 227 >UniRef50_C9XRL7 Two-component response regulator n=4 Tax=Clostridium difficile RepID=C9XRL7_CLODC Length = 225 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L EN ++ S+ E+ ++ TV V I ++RK S + I T+ G Sbjct: 159 ILLFLAENKEQVFSKIEIYNQVWKMPDIGDQHTVQVHIAQMRKKINSLSREHQYIQTVWG 218 Query: 61 EGYRFCG 67 +GY+F Sbjct: 219 KGYKFVP 225 >UniRef50_Q1GLX1 Two component transcriptional regulator, winged helix family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GLX1_SILST Length = 238 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 38/65 (58%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +N G++ +R +LL++ R + DR++D+ I R+R+ E P PE I T+ G Sbjct: 174 LRVFAQNRGRVLNRDQLLEQAHDRGWEHFDRSIDLRISRLRRKIEQNPTKPETIRTVRGI 233 Query: 62 GYRFC 66 GY F Sbjct: 234 GYIFD 238 >UniRef50_A8F5U3 Two component transcriptional regulator, winged helix family n=1 Tax=Thermotoga lettingae TMO RepID=A8F5U3_THELT Length = 228 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NPG + SR E+++K+ E +DV I +R + I T+ G Sbjct: 163 LELFLRNPGIVFSREEIMEKVWENEKIIKSNVIDVYILYLRNKLKPYGYD-RYIQTVPGY 221 Query: 62 GYRFCGD 68 GYRFC + Sbjct: 222 GYRFCEE 228 >UniRef50_B8GBX2 Two component transcriptional regulator, winged helix family n=9 Tax=Chloroflexi RepID=B8GBX2_CHLAD Length = 247 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +N G + + LL K+ G E + + + I +R+ E P P I T G Sbjct: 167 LYHLVQNAGYVLTHEMLLSKVWGPEYRDESHYLRLYITYLRQKIEEDPSNPRYILTERGV 226 Query: 62 GYRFC 66 GYRF Sbjct: 227 GYRFV 231 >UniRef50_A9AXT6 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXT6_HERA2 Length = 231 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P K+ + LL+ + G + + + V I R+R+ E+ P P + T G Sbjct: 166 LAYLITHPNKVLTHRMLLQHVWGDQYRDEAEYLRVYIGRLRRKLEADPSNPRHLLTEAGI 225 Query: 62 GYRFCG 67 GYRF Sbjct: 226 GYRFVS 231 >UniRef50_B4CW77 Two component transcriptional regulator, winged helix family n=2 Tax=Verrucomicrobia RepID=B4CW77_9BACT Length = 229 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 30/67 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ SR ++ + G + + R++D + +R E P P I+ T+ Sbjct: 162 LTFLVTNAGRALSRDRIMSTVWGYDSRVTPRSIDRFVNALRNKIEPDPAEPRILKTVREF 221 Query: 62 GYRFCGD 68 GY+F Sbjct: 222 GYKFELP 228 >UniRef50_Q01N64 Two component transcriptional regulator, winged helix family n=2 Tax=Acidobacteria RepID=Q01N64_SOLUE Length = 245 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ GK SR +L+++ G R +D I R+R++ E P P + T+ G Sbjct: 174 LRYLIQHEGKPVSRKAMLEEVWGLHEDTDTRAIDNFIVRLRRYVEEEPTKPRHLLTVRGV 233 Query: 62 GYRFCG 67 GYRF Sbjct: 234 GYRFVA 239 >UniRef50_B1VIL1 Two-component system response regulator n=3 Tax=Corynebacterium RepID=B1VIL1_CORU7 Length = 256 Score = 87.0 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + S++++L + + V+ + +R+ P +I T+ G Sbjct: 190 LRYLMVNAEVVLSKSKILDHVWNYDFGGDGNVVESYVSYLRRKI--DTKEPRLIHTVRGV 247 Query: 62 GYRFCGD 68 GY Sbjct: 248 GYVLRKP 254 >UniRef50_Q1LHM7 Two component transcriptional regulator, winged helix family n=25 Tax=Proteobacteria RepID=Q1LHM7_RALME Length = 261 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 39/69 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F E+P ++ R L+ GR+L DR++D+ + R+R+ P +I T+ GE Sbjct: 192 LLTFIEHPNRVLDREMLINTARGRDLDVFDRSIDLLVSRLRQKLRDDPRDSALIRTVRGE 251 Query: 62 GYRFCGDLE 70 GY F G +E Sbjct: 252 GYVFTGTVE 260 >UniRef50_D2LRZ5 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LRZ5_BACS4 Length = 236 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + ++PG++ SRA+LL+K+ + ++R++DV I+ +RK E P+ I T+ Sbjct: 161 IITIMAKHPGRVFSRADLLQKIQEDSFFEGYERSIDVHIKNLRKKLEVNTKQPKYILTVF 220 Query: 60 GEGYRF 65 G GY+F Sbjct: 221 GMGYKF 226 >UniRef50_C6BIK6 Two component transcriptional regulator, winged helix family n=9 Tax=cellular organisms RepID=C6BIK6_RALP1 Length = 280 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL ++ G + +RTVDV +R++R TP +I T+ G Sbjct: 168 LHFLVAHPQRVHSRTQLLDRVWGNHVFVGERTVDVHVRKLRVALAGTPCDG-LIQTVRGG 226 Query: 62 GYRFCG 67 GYR Sbjct: 227 GYRLVA 232 >UniRef50_Q1CZP3 DNA-binding reponse regulator n=2 Tax=Myxococcales RepID=Q1CZP3_MYXXD Length = 231 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E PG+ +RA++ + + DRTVD I RIRK I T G Sbjct: 163 VLAYLAERPGRALTRAQIAQHALPPSEERDDRTVDSHIARIRKKLGPAGA---RIQTSWG 219 Query: 61 EGYRFCGDLE 70 GYRF D E Sbjct: 220 IGYRFVPDEE 229 >UniRef50_B3DXI2 Phosphate regulon transcriptional regulatory protein phoB n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DXI2_METI4 Length = 258 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E G +QSR +LLK++ G + RT+D IRR+R + + T+ G Sbjct: 194 LSTLVEREGAVQSREQLLKEVWGYDKTVDTRTIDTHIRRLRDKLGRAS---QYLRTVRGI 250 Query: 62 GYRFCG 67 GYRF Sbjct: 251 GYRFKK 256 >UniRef50_A9KGK4 Phosphate regulon transcriptional regulatory protein n=6 Tax=Coxiella burnetii RepID=A9KGK4_COXBN Length = 248 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P K SR +L+ + G + DRTVDV +RR+R + D +I TI G Sbjct: 178 LHFFMKHPNKTYSRDQLITYIWGGNIYIDDRTVDVQVRRLRDKLKKY-DHHHLIKTIRGA 236 Query: 62 GYRFCGDL 69 GY+ D Sbjct: 237 GYQLSTDD 244 >UniRef50_D2LRZ1 Two component transcriptional regulator, winged helix family n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LRZ1_BACS4 Length = 230 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 N GK+ SR LL+ G E + +RTVD ++ IR+ ++ T II T+ G Sbjct: 162 IFYRLASNRGKVYSRDHLLELEWGMEYEGDNRTVDTHVKNIREKLKAVGYTDAIIETVWG 221 Query: 61 EGYR 64 GY+ Sbjct: 222 IGYK 225 >UniRef50_B4WP26 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WP26_9SYNE Length = 676 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP + SR ++ + P + TV ++ +R+ + ++I T++G Sbjct: 159 LELFLRNPAQAFSREAIIDNLWSYSDAPGEETVTSHMKGLRRKLRTVGAPADLIETVYGV 218 Query: 62 GYRFCG 67 GYR Sbjct: 219 GYRLKP 224 >UniRef50_Q3A190 Two component signal transduction response regulator n=4 Tax=Bacteria RepID=Q3A190_PELCD Length = 238 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + R LL G + + RT+D I ++RK E P P++I T+HG Sbjct: 168 LEAFYRHPDEALPRNTLLNLAWGIDYQGTTRTLDQHIAQLRKKIEPDPAAPQVIMTVHGI 227 Query: 62 GYRFCG 67 GYR+ Sbjct: 228 GYRYVA 233 >UniRef50_D1XII5 Two component transcriptional regulator, winged helix family n=1 Tax=Streptomyces sp. ACTE RepID=D1XII5_9ACTO Length = 253 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPG + R +++ ++ G RT+DV + +R PE I T+ G Sbjct: 186 LAALVANPGVVLERRDIISRVWGENWFGSTRTIDVHVGSLRGKLG----CPEWIQTVRGV 241 Query: 62 GYRFCGD 68 GY+ Sbjct: 242 GYKLTAP 248 >UniRef50_UPI0001C318D2 two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C318D2 Length = 224 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F +P + SR ++L + G + P V+V IR +R+ E P P I T+ Sbjct: 158 LAYFLRHPDQALSRQQILSAVWGYDFDPGTNVVEVYIRYLRRKLE-LPGRPTPIDTLRSV 216 Query: 62 GYRFCGDL 69 GYR Sbjct: 217 GYRLTTRP 224 >UniRef50_B4U9M6 Two component transcriptional regulator, winged helix family n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9M6_HYDS0 Length = 225 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP K R LL K+ G VDV I+ IR E P P++I TI G Sbjct: 159 LKVLAQNPNKTIRREVLLNKVWGIASDYDSNIVDVYIKNIRNKLEDKP--PKLILTIRGR 216 Query: 62 GYRFCGD 68 GY + Sbjct: 217 GYMLSTE 223 >UniRef50_C3X860 Response regulator receiver protein n=2 Tax=Oxalobacter formigenes RepID=C3X860_OXAFO Length = 233 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ SR++LL K+ +L +RTVDV + R+RK + ++ T+ G Sbjct: 166 LKFLMANPDRVFSRSQLLDKVWSNQLDIEERTVDVHVLRLRKALK---GQENLVRTVRGM 222 Query: 62 GYRFCGDLE 70 GY + Sbjct: 223 GYMLSEKDK 231 >UniRef50_B2V7Q1 Two component transcriptional regulator, winged helix family n=3 Tax=Hydrogenothermaceae RepID=B2V7Q1_SULSY Length = 231 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + GK+ SR +++ + + +DRT+DV I+++R+ + I TI G Sbjct: 165 LLALVNSQGKVLSRDYIIEHVWAWDKDVYDRTIDVHIKKLRELLKEYG---NCIKTIRGV 221 Query: 62 GYRFCGDL 69 GY++ + Sbjct: 222 GYKWECEP 229 >UniRef50_C7RUD8 Two component transcriptional regulator, winged helix family n=16 Tax=Proteobacteria RepID=C7RUD8_9PROT Length = 235 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + NP + + +LLK + G V V + +RK E P P+ + T G Sbjct: 164 LSYLIANPDCVLTHRQLLKNVWGPGHVEDSHYVRVYMGNLRKKIEDDPARPKHLRTEAGV 223 Query: 62 GYRFCG 67 GYRF G Sbjct: 224 GYRFVG 229 >UniRef50_D1BX45 Two component transcriptional regulator, winged helix family n=26 Tax=Actinomycetales RepID=D1BX45_XYLCX Length = 227 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + R L++ + G + +T+D+ + +R+ + P ++T+ G Sbjct: 159 LKVLVANAGSVVVRDTLMRDVWGSDPVGSTKTLDMHVSWLRRKLGDDANAPRYVSTVRGL 218 Query: 62 GYRFCG 67 G+RF Sbjct: 219 GFRFEA 224 >UniRef50_C0ZH45 Two-component response regulator n=2 Tax=Bacillales RepID=C0ZH45_BREBN Length = 229 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+P + SR ELL + G + DR VD IRRIRK + P + T+ G Sbjct: 161 VLSLLSEHPNRAFSRDELLSLIWGFDYFGSDRVVDDLIRRIRKKLDKIP-----LETVWG 215 Query: 61 EGYRFCG 67 GYR Sbjct: 216 FGYRLRT 222 >UniRef50_C5QMK0 Hemin DNA-binding response regulator n=3 Tax=Bacillales RepID=C5QMK0_STAEP Length = 234 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 NP I +R ++++K+ G + + DRTVDV I+R+RK + I T+ G+GY Sbjct: 170 LLVSNPKHIFTRDDIIEKIWGFDYEGDDRTVDVHIKRLRKRLMQLEAS-VSIHTVRGQGY 228 Query: 64 R 64 Sbjct: 229 M 229 >UniRef50_A6FSM2 Probable two-component response regulator protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSM2_9RHOB Length = 228 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 39/68 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR E+ + G+ P DRT+D + R+R+ + D P +I ++ G Sbjct: 142 LELFVRHPGRVLSRDEISLALRGQAWSPLDRTIDGHVARLRRKIDPGHDEPLLIRSVRGV 201 Query: 62 GYRFCGDL 69 GY F G++ Sbjct: 202 GYVFTGEV 209 >UniRef50_P52108 Transcriptional regulatory protein rstA n=163 Tax=Proteobacteria RepID=RSTA_ECOLI Length = 239 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+I R LLK + G DR+VDV I R+RK P I T+ + Sbjct: 170 LWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNK 229 Query: 62 GYRFCG 67 GY F Sbjct: 230 GYLFAP 235 >UniRef50_C6NVH5 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVH5_9GAMM Length = 247 Score = 86.7 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SR LL + GR+ +RTVDV IRR+R+ II T+ GE Sbjct: 171 LRLFATNPDRVYSREALLDHIWGRQSFIEERTVDVHIRRLRRALAKVGY-ANIIETVRGE 229 Query: 62 GYR 64 GYR Sbjct: 230 GYR 232 >UniRef50_UPI0001C32387 two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32387 Length = 284 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 N G++ R + +++ G + DR+VDV +R++R+ E I T G G Sbjct: 188 RLLAGNAGQVLEREAIYQRVWGYAMAHGDRSVDVFVRKLRQKLERASPQWRYIHTHFGVG 247 Query: 63 YRFCGD 68 YRF + Sbjct: 248 YRFAPE 253 >UniRef50_C4ZP42 Two component transcriptional regulator, winged helix family n=2 Tax=Proteobacteria RepID=C4ZP42_THASP Length = 242 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 40/70 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +PG+I R L + ++G + P DR+VDV +RR+R + T +IATI G Sbjct: 169 VLALLVRHPGEILDRDRLSRAVSGHDWSPQDRSVDVLVRRLRAKLDDPARTDSLIATIRG 228 Query: 61 EGYRFCGDLE 70 EGYR D+E Sbjct: 229 EGYRLAADVE 238 >UniRef50_C6RFL7 Two component transcriptional regulator, winged helix family n=1 Tax=Campylobacter showae RM3277 RepID=C6RFL7_9PROT Length = 224 Score = 86.3 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGKI +R E+++++ G + +R VD ++++R+ E T IAT+ G Sbjct: 159 LFLLLSNPGKIFTRLEIMQEIWGYDTDSDERAVDTHVKKLRRKLE--GCTDFEIATVRGI 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_C9LLD5 DNA-binding response regulator ResD n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLD5_9FIRM Length = 234 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFES-TPDTPEIIATIHG 60 + +P ++ S+ +L +++ + TV V I R+R + + E I T+ G Sbjct: 167 LYFLATHPNEVFSKEQLFEQIWSLDPIGEPATVTVHINRLRSKLKKVSGRAYERIETVWG 226 Query: 61 EGYRF 65 GYRF Sbjct: 227 SGYRF 231 >UniRef50_A6W3G3 Two component transcriptional regulator, winged helix family n=9 Tax=Gammaproteobacteria RepID=A6W3G3_MARMS Length = 244 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F +PG + +R + + GR+ P DR +DV + R+R+ P++I TI G+ Sbjct: 170 LMLFLTHPGAVLTRELIAENTRGRDSAPLDRFIDVHVSRLRQRLREDARQPQLIKTIRGQ 229 Query: 62 GYRFCGDLE 70 GY +E Sbjct: 230 GYILTASVE 238 >UniRef50_UPI0001B518F4 two-component system response regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B518F4 Length = 206 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 4/68 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H +PG + SR +++ ++ RT+DV + +R+ P I TI Sbjct: 126 LAHLARDPGAVCSRQQIMDQVWDPHFFGPTRTLDVHVAALRRKLGD----PAWIETIRRV 181 Query: 62 GYRFCGDL 69 G+R Sbjct: 182 GFRLRVPD 189 >UniRef50_C7PII2 Two component transcriptional regulator, winged helix family n=5 Tax=Sphingobacteriales RepID=C7PII2_CHIPD Length = 235 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G++ +R ++L+ + G + P RT+D I RK+FE ++ G Sbjct: 170 LKLLIENKGEVVTREKILQVVWGYNVYPTTRTIDNFILNFRKYFEEDSRNSRYFHSVRGV 229 Query: 62 GYRFCG 67 GY+F Sbjct: 230 GYKFTE 235 >UniRef50_UPI0001C424C1 hypothetical protein BpOF4_12950 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C424C1 Length = 377 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ SR +LL + G E P DRTVD I R+RK + + I TI G+ Sbjct: 30 LHFLYRHPNQVFSRDKLLDAVWG-EGTPTDRTVDDHIYRVRKKLGTL-KSGIKINTIRGQ 87 Query: 62 GYRFCG 67 GY Sbjct: 88 GYCLIK 93 >UniRef50_Q8RBP2 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain n=3 Tax=Clostridia RepID=Q8RBP2_THETN Length = 224 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 N GK+ SR + L ++ G + RTVD I+++R+ +I T+ G GY+ G Sbjct: 167 NKGKVVSREKCLNEVWGYDFYGDLRTVDTHIKQLREKLGE---KRNLIKTVWGIGYKLEG 223 Query: 68 D 68 D Sbjct: 224 D 224 >UniRef50_B1XLL2 Two-component response regulator n=3 Tax=Synechococcus RepID=B1XLL2_SYNP2 Length = 249 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ S +E+LK++ G + T+ V +R +R E P P+ I T++G Sbjct: 166 LHCLLQRHGQTISPSEILKEVWGYDPSDDIETIRVHVRHLRTKLEPEPRRPQYIKTVYGA 225 Query: 62 GYRFCGDLE 70 GY Sbjct: 226 GYCLELPSR 234 >UniRef50_B0P738 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P738_9FIRM Length = 224 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N + +R +++ + + DRTVD I+ +R + I T+ Sbjct: 160 LYYLIRNTNIVLTRDQIICTVWDMDYAGDDRTVDTHIKCLRAKLGPYA---KCIVTVRKV 216 Query: 62 GYRFC 66 GY+F Sbjct: 217 GYKFE 221 >UniRef50_D0KWS3 Two component transcriptional regulator, winged helix family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWS3_HALNC Length = 262 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 37/66 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E P ++ +R +++ + G E DR++DV I R+R+ E+ P P + TI GE Sbjct: 178 LQFFMERPNRVINRDQIMDYLKGYERSAFDRSIDVRITRLRRKIETNPTEPRYLVTIWGE 237 Query: 62 GYRFCG 67 GY F Sbjct: 238 GYLFAP 243 >UniRef50_P69229 Transcriptional regulatory protein baeR n=214 Tax=Bacteria RepID=BAER_ECOL6 Length = 240 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK+ SR +LL + DRT+D I+ +R+ ES I ++G Sbjct: 169 LKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGV 228 Query: 62 GYRFCGD 68 GYR+ D Sbjct: 229 GYRWEAD 235 >UniRef50_B2IER4 Two component transcriptional regulator, winged helix family n=9 Tax=Proteobacteria RepID=B2IER4_BEII9 Length = 277 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG+ +RA LL+ + P VDV I ++RK P ++I ++ G Sbjct: 213 LEYLMRRPGQTVTRAMLLEDVWNYNFLPQTNLVDVHIGKLRKKI-DQPGEVQMIESVRGA 271 Query: 62 GYRFC 66 G+R Sbjct: 272 GFRLN 276 >UniRef50_B4DAQ3 Two component transcriptional regulator, winged helix family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAQ3_9BACT Length = 230 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G+ ++ +LL+++ P VDV + R+R ++I T+ G Sbjct: 165 LELLVRNRGRALTKMQLLERLWDYSFDPQTNVVDVLVCRLRNKL-DRGFDTKLIHTLRGI 223 Query: 62 GYRFCGD 68 GY F + Sbjct: 224 GYVFRPE 230 >UniRef50_B5EQN9 Two component transcriptional regulator, winged helix family n=3 Tax=Proteobacteria RepID=B5EQN9_ACIF5 Length = 243 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SR LL ++ GR+ +RTVDV IRR+R+ E +II T+ GE Sbjct: 168 LRLFVTNPERVFSRDMLLDQIWGRQSFVEERTVDVHIRRLRRGLEHHGY-AQIIETVRGE 226 Query: 62 GYR 64 GYR Sbjct: 227 GYR 229 >UniRef50_A0L7S7 Two component transcriptional regulator, winged helix family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L7S7_MAGSM Length = 250 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR ++L G++ +P RT+D+ + R+RK P +I T+ Sbjct: 170 LRVFLHHPNRVLSRDQILDLTYGKDQEPFGRTIDMQVSRLRKRLVDNAKDPSLIKTVRNA 229 Query: 62 GYRFCGDL 69 GY FC + Sbjct: 230 GYVFCSRV 237 >UniRef50_D2QGK1 Two component transcriptional regulator, winged helix family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGK1_9SPHI Length = 244 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 28/69 (40%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK SR ++L + G ++ TV I R+R E P I T G Sbjct: 167 LTLLASYPGKSFSRQKILSLVWGYHHDGYEHTVTAHINRLRIKIEPDFTRPIYILTTWGI 226 Query: 62 GYRFCGDLE 70 GYRF Sbjct: 227 GYRFADSDN 235 >UniRef50_C4ZFF8 DNA-binding response regulator n=60 Tax=Bacteria RepID=C4ZFF8_EUBR3 Length = 248 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + G + S EL + E + T+ V IR +R+ T DTP+ I TI Sbjct: 183 ILHVLLSSAGNVVSIEELFHAVWKDEYYSKNSSTITVHIRHLREKLNDTSDTPQYIKTIW 242 Query: 60 GEGYR 64 G GY+ Sbjct: 243 GVGYK 247 >UniRef50_A4CE30 Probable two-component response regulator transcription regulator protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CE30_9GAMM Length = 227 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 28/66 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK SR +L + G E+ P VDV I ++RK +I T G Sbjct: 159 ILELLMTNTGKYLSRERILSNVWGMEMDPMTNVVDVYIGKLRKKLTIESKGESMIETKRG 218 Query: 61 EGYRFC 66 GYR Sbjct: 219 IGYRLN 224 >UniRef50_UPI00019732E7 DNA-binding response regulator n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019732E7 Length = 236 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ SR +L + + + D TV I+ +RK TP E I + G Sbjct: 165 LFCLASHVGQVLSREQLYQMVWDENSVYNVDETVKAHIKSLRKKL--TPSGAEYIKNVWG 222 Query: 61 EGYRFCGDLE 70 GYRF D Sbjct: 223 IGYRFSTDEN 232 >UniRef50_B2TMR2 Transcriptional regulatory protein ResD n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TMR2_CLOBB Length = 227 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 35/69 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L NP KI SR ELL+ + + DR +D I+ +R+ E +II TI+G Sbjct: 159 ILLLMASNPQKIYSREELLESVIEEYYEKMDRVIDSHIKNLRQKIEVNSRDCKIIKTIYG 218 Query: 61 EGYRFCGDL 69 GYRF Sbjct: 219 VGYRFELQD 227 >UniRef50_Q1NHM9 DNA-binding response regulator n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHM9_9SPHN Length = 224 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ SRA LL+++ P V+ + R+R+ + + I T+ G Sbjct: 158 LEQLIRQQDQVVSRAMLLEQVWHFHFDPQTNIVETHMSRLRQKLNA-GFDCDPIQTVRGV 216 Query: 62 GYRFCGD 68 GY+ D Sbjct: 217 GYKLRSD 223 >UniRef50_A4X7Q0 Response regulator receiver n=46 Tax=Actinomycetales RepID=A4X7Q0_SALTO Length = 334 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 32/68 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E G++ SR EL+ ++ + ++T+DV I +R+ T P ++ T+ G Sbjct: 266 VLTYLAERVGQVVSRRELMTEVWRQARIGEEQTIDVHISWLRRKLGETAAKPRLLHTVRG 325 Query: 61 EGYRFCGD 68 G Sbjct: 326 VGVMMVDQ 333 >UniRef50_A6CDX9 Two component transcriptional regulator, winged helix family protein n=2 Tax=Bacteria RepID=A6CDX9_9PLAN Length = 231 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F NPGK+ SR + + T++V ++ +R E+ P +I T+ G Sbjct: 160 LLFFLRNPGKVLSRTRIYDTVWDDSYDGLSNTLEVHVKELRHKLEACG--PRVIQTLRGR 217 Query: 62 GYRFCGDLED 71 GY +D Sbjct: 218 GYVLETTSDD 227 >UniRef50_C6I3R1 Two-component system response regulator n=20 Tax=Bacteroidales RepID=C6I3R1_9BACE Length = 229 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G++ SR ++L ++ E+ DRT+DV I R+RK + + I T G Sbjct: 165 ILFLLLQNKGRVFSREDILSRIWSDEVYVLDRTIDVNITRLRKKIGTYG---KRIVTRLG 221 Query: 61 EGYRFCGD 68 GY F + Sbjct: 222 YGYCFETE 229 >UniRef50_A3WKN2 Response regulator (CheY,wHTH domains) n=1 Tax=Idiomarina baltica OS145 RepID=A3WKN2_9GAMM Length = 225 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ S+ +L GR++ P DR++DV I IRK P PE I T+ G Sbjct: 161 ILRCLMQQAGQMVSKDQLSVAALGRKMGPFDRSLDVHISNIRKKL---PANPERIQTVRG 217 Query: 61 EGYRFCGD 68 GYR + Sbjct: 218 RGYRLVNE 225 >UniRef50_B0G2J4 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G2J4_9FIRM Length = 257 Score = 86.3 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N + S L + + + TV V IR +R E P PE+I T+ G Sbjct: 192 LELLVANRHQTFSAQRLFESVWQEPYYYGANNTVTVHIRNLRSKVEDHPGNPELIKTVWG 251 Query: 61 EGYR 64 +GYR Sbjct: 252 KGYR 255 >UniRef50_D0SP77 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Acinetobacter junii SH205 RepID=D0SP77_ACIJU Length = 240 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P K+ SR +L+ + +RTVD I+ +R+ + + I T G Sbjct: 173 LFLLIQHPEKVFSRQQLMDHIWEHPEHSLERTVDTHIKSLRQKLKQITPDDDPIRTHRGF 232 Query: 62 GYRFCG 67 GY Sbjct: 233 GYSLVK 238 >UniRef50_UPI000185BED4 KDP operon transcriptional regulatory protein KdpE n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BED4 Length = 247 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++ ++ G++ ++ ELLK + G + + + V I ++R E + + T G Sbjct: 178 ILVYLVQHRGELVTKLELLKAVWGDQYEKETNYLRVYISQLRHKIEPQQAHNKYLRTEVG 237 Query: 61 EGYRFCGDLE 70 GYR D E Sbjct: 238 VGYRMVLDEE 247 >UniRef50_C7LZ74 Two component transcriptional regulator, winged helix family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ74_ACIFD Length = 225 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F +P +R ELL + G E DRTVDV + ++RK I+T+ G Sbjct: 161 LGYFFAHPATALTRRELLDGVWGPEWYGDDRTVDVHVLQLRKKLGGAIA----ISTVWGV 216 Query: 62 GYRFCGDL 69 GYRF + Sbjct: 217 GYRFDPEE 224 >UniRef50_C6HUL5 Two component transcriptional regulator, winged helix family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUL5_9BACT Length = 232 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ G++ R LL + G + + DRTVDV IRR+RK + + T+ Sbjct: 164 LVALMRVAGRVLDRETLLNTVWGDDYEGTDRTVDVHIRRLRKKMGESAA---WVETVKQI 220 Query: 62 GYRFCGD 68 GYRF + Sbjct: 221 GYRFREE 227 >UniRef50_C6J181 Two-component system response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J181_9BACL Length = 225 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ +R L+ ++ G + + ++V + +R E+ P +I T+ G Sbjct: 161 LCFFMKHPQQVLTRELLMDRVWGFDFRGESNVLEVYVGYLRSKLEAQN-EPRLIHTVRGA 219 Query: 62 GYRFCG 67 GY Sbjct: 220 GYVLRE 225 >UniRef50_B5EH76 Two component transcriptional regulator, winged helix family n=9 Tax=Bacteria RepID=B5EH76_GEOBB Length = 246 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ + +++LK++ G + V IR +R+ E P P I T G Sbjct: 180 LRLLVTHAGRVLTHSQILKQIWGVAYVEQQNVLRVNIRNLRQKIEPDPSRPFYITTEVGV 239 Query: 62 GYRFCGD 68 GYR + Sbjct: 240 GYRLRSE 246 >UniRef50_C2Z9H3 DNA-binding response regulator n=4 Tax=Bacillaceae RepID=C2Z9H3_BACCE Length = 226 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+I S+ ++ +K+ G + T+ V I +R + I T+ G Sbjct: 160 ILELLTVNLGQIFSKEQIYEKIWGLDAVGDLNTIIVHINNLRAKLS-LGMSTYHIKTVWG 218 Query: 61 EGYRFCG 67 GY+ Sbjct: 219 VGYKLEK 225 >UniRef50_C0Z621 Two-component response regulator n=5 Tax=Firmicutes RepID=C0Z621_BREBN Length = 239 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN G + +R ++ ++ G TV V I+ +R+ E + I T G Sbjct: 175 LTFLAENAGIVFTREQIYDRVWGYGY-GSLNTVTVHIKNLREKLE---TERQFIKTQWGT 230 Query: 62 GYRFCGD 68 GY F G+ Sbjct: 231 GYVFIGE 237 >UniRef50_UPI0001C3717E DNA-binding response regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3717E Length = 225 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP K ++AEL + + D T++V + +R + E I T+ G Sbjct: 160 LELFMKNPKKTYTKAELYESVWNDVYYYEDNTINVHVSNLRNKLKKV-SGREHIETVWGI 218 Query: 62 GYRFCGD 68 GYR + Sbjct: 219 GYRLRSE 225 >UniRef50_D1VT61 Regulatory protein VanR n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT61_9FIRM Length = 227 Score = 85.9 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP KI S+ L + + E D T++V I +R + E I T+ Sbjct: 162 ILKILLKNPNKIFSKENLYRSVWNDEYFFEDDTINVHISNLRSKIKKLDTE-EYIETVWA 220 Query: 61 EGYRFCG 67 GYR Sbjct: 221 VGYRLKK 227 >UniRef50_C8PVM6 Putative transcriptional regulator OmpR n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVM6_9GAMM Length = 245 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F + GK+ SR +L M + + DR +DV I R+R E P P+ I T+ G Sbjct: 176 LHYFATHSGKVLSREQLWHAMPNDDSSDNIDRAIDVHISRLRALIEDNPRQPKRIITVRG 235 Query: 61 EGYRFCGD 68 GY+F D Sbjct: 236 VGYQFATD 243 >UniRef50_A5F0A5 Transcriptional regulator n=77 Tax=Proteobacteria RepID=A5F0A5_VIBC3 Length = 245 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L N G++ +R ELL + G P RTVD + ++R+ I T+ G Sbjct: 185 LLFLASNLGRVFTRDELLDHVWGYNHFPTTRTVDTHVLQLRQKL-----PGLEIETLRGV 239 Query: 62 GYRFCG 67 GY+ Sbjct: 240 GYKMKA 245 >UniRef50_UPI0001B9ECAC two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ECAC Length = 317 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P +I SR LL+K+ + D T++V I R+RK + + T+ G Sbjct: 246 ILDELMKKPEQIVSRDRLLEKIWDDQAFVDDNTLNVYITRVRKKLAALGIEDGL-QTVRG 304 Query: 61 EGYRFCGDLED 71 GYR D Sbjct: 305 RGYRLVPSWRD 315 >UniRef50_B6IQC2 Cell cycle transcriptional regulator, putative n=3 Tax=Alphaproteobacteria RepID=B6IQC2_RHOCS Length = 256 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 N G++ S+ ++ + + G P D+ +DV I ++RK I T++ Sbjct: 158 IFSVLALNVGRVVSKEKIYETVYGLTGSDPLDKVIDVYICKLRKKLAEATGGDRYIETVY 217 Query: 60 GEGYRFCGDLED 71 G GY+F E+ Sbjct: 218 GRGYKFEAPSEE 229 >UniRef50_UPI0000164CF1 response regulator n=1 Tax=Deinococcus radiodurans R1 RepID=UPI0000164CF1 Length = 243 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ +R EL+ ++ VD +R +R+ E++ T+ G Sbjct: 181 LEVLASHPGRVYTRDELIDRVWDGRFDAESNVVDTYVRNLRRKLGD-----EVVQTMRGV 235 Query: 62 GYRF 65 GY F Sbjct: 236 GYSF 239 >UniRef50_Q0TNL1 DNA-binding response regulator n=8 Tax=Clostridium perfringens RepID=Q0TNL1_CLOP1 Length = 232 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+F +NP SR ++L + G E RTVDV +RR+R+ + EII TI G Sbjct: 166 LLYFLDNPNIALSRDQILDGVWGDEYFGDFRTVDVHVRRLRQKL----NNEEIIETIFGL 221 Query: 62 GYRFCGD 68 GY F G+ Sbjct: 222 GYMFKGE 228 >UniRef50_A1VI78 Two component transcriptional regulator, winged helix family n=54 Tax=Bacteria RepID=A1VI78_POLNA Length = 282 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + PG++ +R EL ++ DRT+D I+ +R ++ E I T G Sbjct: 211 ILRLLVLRPGRVFTRDELFDQVWTDGSGSLDRTIDAHIKTLRAKLKAVAPHAEPIRTSRG 270 Query: 61 EGYRFCG 67 GY Sbjct: 271 SGYALSE 277 >UniRef50_UPI000196BAD1 hypothetical protein CATMIT_00504 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD1 Length = 223 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 +NP +I +R +L++K+ G + DRTVDV I+RIR++ P + T+ G GY+ Sbjct: 162 LAKNPNQIFTREQLIEKIWGMDYDGFDRTVDVHIKRIRENLGHLPG--FKVVTVRGLGYK 219 Query: 65 FCGD 68 + Sbjct: 220 IEVE 223 >UniRef50_B1ZVS5 Two component transcriptional regulator, winged helix family n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B1ZVS5_OPITP Length = 228 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G+ ++ +L+ + P VDV + R+R + I T+ G Sbjct: 164 LEYLLRHAGRPVTKVMILEHVWDYSFDPQTNVVDVLMSRLRSKIDPD---KTRIETLRGV 220 Query: 62 GYRFCG 67 GY F Sbjct: 221 GYVFKA 226 >UniRef50_B0TF57 Transcriptional regulator, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF57_HELMI Length = 277 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ K+ +R +LL ++ G + R+VD ++R+RK + T E I T+ G Sbjct: 205 LSFLAKHKKKVFTREQLLDQIWGYHFAGNLRSVDDLVKRLRKKLAQSGSTLE-IKTVWGY 263 Query: 62 GYR 64 GY+ Sbjct: 264 GYK 266 >UniRef50_A5WHF9 Two component transcriptional regulator, winged helix family n=3 Tax=Psychrobacter RepID=A5WHF9_PSYWF Length = 240 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F + GK+ +R +L + M + + DR +DV I R+R E P P+ I T+ G Sbjct: 171 LHYFATHAGKVLNREQLWQAMPNDDSSDNIDRAIDVHISRLRALIEDNPRQPKRIITVRG 230 Query: 61 EGYRFCGD 68 GY+F D Sbjct: 231 VGYQFATD 238 >UniRef50_Q2W608 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W608_MAGSA Length = 228 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + + +LK + G + V + ++R+ E P P +I T G Sbjct: 159 LAFFARHPDHVLTHKHILKGVWGPAHVDDTAYLRVYVNQLRQKLEDDPARPRLIVTDPGV 218 Query: 62 GYRFCGDLE 70 GYR D + Sbjct: 219 GYRLRSDPQ 227 >UniRef50_D0MFI7 Putative two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFI7_RHOM4 Length = 265 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG SR E+L + G VDV + +R+ E+ +I TI G Sbjct: 192 LDFLLSRPGVACSRHEILAHVWGITFDTGTNMVDVYMYFLRRKLEAHGLK-NVIRTIRGY 250 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 251 GYRLDLPAE 259 >UniRef50_D0LLH3 Two component transcriptional regulator, winged helix family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLH3_HALO1 Length = 226 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +NP ++ SR ELL+++ + RTVD + ++R ES P+ P T+ G Sbjct: 162 LAFLVKNPSRVFSREELLRQVWKQSS-GTLRTVDNFVAQLRSKLESDPENPRFFITVRGS 220 Query: 62 GYRFCG 67 GYRF Sbjct: 221 GYRFDS 226 >UniRef50_C7N3P1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3P1_SLAHD Length = 242 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHD-RTVDVTIRRIRKHFESTPDTPEIIATIH 59 +LH E G+ S +L ++ G TV V IR +RK + I T+ Sbjct: 169 VLLHLAERAGEPVSARDLYERAWGETYDASAGNTVMVHIRHLRKKCADVDSSQTFIDTVW 228 Query: 60 GEGYRFCGDLE 70 G GYR G Sbjct: 229 GVGYRLHGPQR 239 >UniRef50_B8FI17 Two component transcriptional regulator, winged helix family n=6 Tax=Proteobacteria RepID=B8FI17_DESAA Length = 229 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 34/66 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P ++ SR ELL G + + +DRT+D IR +RK + E I +I+G Sbjct: 162 ILKVMMSRPNRVFSRNELLDLAIGSQFEGYDRTIDSHIRNLRKKIKKALPDLECIHSIYG 221 Query: 61 EGYRFC 66 GY+F Sbjct: 222 AGYKFN 227 >UniRef50_P0A5Z7 Transcriptional regulatory protein prrA n=41 Tax=Actinomycetales RepID=PRRA_MYCBO Length = 233 Score = 85.9 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+ + SRA+LL+ + G + VDV I +R+ E+ P ++ T+ G Sbjct: 168 LAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA-GGGPRLLHTVRGV 226 Query: 62 GYRFC 66 G+ Sbjct: 227 GFVLR 231 >UniRef50_C9RQT3 Two component transcriptional regulator, winged helix family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQT3_FIBSS Length = 242 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE--LKPHDRTVDVTIRRIRKHFESTPDTPEIIATI 58 + + N R+ELL+K+ G E RTVD+ I ++RK E P P+++ T Sbjct: 166 ILEYLWNNRDHAIPRSELLRKVWGYENAESVDTRTVDIHITKLRKKIEDDPAHPKLLVTF 225 Query: 59 HGEGYRFCGDLE 70 GEGY+ E Sbjct: 226 RGEGYQMRSAPE 237 >UniRef50_C4L1Q9 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L1Q9_EXISA Length = 224 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ +R +LL ++ G E + RTVDV I R+R + I+T+ G Sbjct: 159 LYFLATHLNQVFTRQQLLDRIWGYETESETRTVDVHINRLRARLKPIDAFQ--ISTVWGL 216 Query: 62 GYRFC 66 GYR Sbjct: 217 GYRLE 221 >UniRef50_Q5NY91 Response regulator n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY91_AZOSE Length = 236 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 35/69 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENP + SR +L R++ P DR+VD+ + R+RK E P+ P I T+ Sbjct: 168 LKALVENPNRALSRERILNLSQQRDMDPFDRSVDLRVMRLRKKIEPDPEHPRFIRTVRNA 227 Query: 62 GYRFCGDLE 70 GY F E Sbjct: 228 GYVFVPSGE 236 >UniRef50_C1SGQ1 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGQ1_9BACT Length = 223 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P ++ +R ++L + G E + RTVD + +RK + I ++ Sbjct: 161 LQLLLKHPKRVFTRNQILNAVWGYESDVYTRTVDTHVSSLRKKLGTRGS---FIKSVPKI 217 Query: 62 GYR 64 GYR Sbjct: 218 GYR 220 >UniRef50_Q07HK8 Two component transcriptional regulator, winged helix family n=13 Tax=cellular organisms RepID=Q07HK8_RHOP5 Length = 258 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + FCE G++ SR LL+ G DR++DV + RIR+ E+ P +I T+ Sbjct: 179 LRAFCERAGRVLSREVLLELTQGPNCGSFDRSIDVLVSRIRRKIEADPADALMIKTVRSG 238 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 239 GYMFTPVVE 247 >UniRef50_B7QTW7 Two-component response regulator n=1 Tax=Ruegeria sp. R11 RepID=B7QTW7_9RHOB Length = 225 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+IQ+RA LL+++ +P V+ + R+R E P E I TI G Sbjct: 161 LEVLMRSKGRIQTRAMLLERVWDINFEPSTSVVETHMSRLRNKIEK-PFDAEYIRTIRGS 219 Query: 62 GYRFC 66 GY F Sbjct: 220 GYMFI 224 >UniRef50_Q3ATG7 Two component transcriptional regulator, winged helix family n=12 Tax=Chlorobiaceae RepID=Q3ATG7_CHLCH Length = 253 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + G+ QSR LL + + RT+D I RIR+ + +I T+ G Sbjct: 183 LVALLKRKGEAQSRETLLSDVWDIDKSISTRTIDTHITRIREKLGNYGA---LIKTVRGL 239 Query: 62 GYRFCGDLED 71 GYR ++ Sbjct: 240 GYRLEPQEDE 249 >UniRef50_A0L527 Two component transcriptional regulator, winged helix family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L527_MAGSM Length = 250 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 43/68 (63%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F G+ QSR +LL ++ RE P+DRT+DV + R+R+ E P+++ TIHG Sbjct: 174 LLAFVNRAGRAQSRDQLLDAVSNREWSPNDRTIDVMVNRLRRKLEVDARDPKLLITIHGV 233 Query: 62 GYRFCGDL 69 GY+F ++ Sbjct: 234 GYQFTPEV 241 >UniRef50_C8P1C0 Regulatory protein VanR n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1C0_ERYRH Length = 231 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHD-RTVDVTIRRIRKHFESTPDTPEIIATIH 59 + N GKI S + + + E TV V IR +RK E+ P+ P+II I Sbjct: 165 ILKLLATNRGKIFSIQSIYENVWQDEYLYSSANTVMVHIRNLRKKIENCPENPKIIKNIW 224 Query: 60 GEGYR 64 G GY+ Sbjct: 225 GRGYK 229 >UniRef50_D1A718 Putative two component transcriptional regulator, winged helix family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A718_THECD Length = 220 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ +R +LL+ + +RTVDV I ++R I T+ G Sbjct: 159 LCFLMGRPGRVFTREQLLEAAWEPGVSAGNRTVDVHIAQLRAKLGEASP----IRTVRGV 214 Query: 62 GY 63 GY Sbjct: 215 GY 216 >UniRef50_C7N3P4 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=4 Tax=Bacteria RepID=C7N3P4_SLAHD Length = 235 Score = 85.5 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G I + +L + + G + + V +RR+R+ E P P+ I T+ G Sbjct: 167 LSRLVRSRGSIVTSDDLAQAVWG-TSFGYANALMVHVRRLREKIEDDPSDPQWILTVRGL 225 Query: 62 GYRFCGD 68 GYR D Sbjct: 226 GYRLAKD 232 >UniRef50_A1WWM5 Response regulator receiver protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WWM5_HALHL Length = 160 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ++ +R EL++ + G RTVD +RR+R+ +I T+ G Sbjct: 88 LHFLAAHRHRVVTRDELIRGVWGPRAYLESRTVDAHVRRLRQALRPAGYD-RMIRTVRGV 146 Query: 62 GYRFCG 67 GY Sbjct: 147 GYHLDS 152 >UniRef50_B1ZLF1 Two component transcriptional regulator, winged helix family n=23 Tax=cellular organisms RepID=B1ZLF1_METPB Length = 291 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P + SR LL R+ DR +DV I RIRK E P P I T+ G Sbjct: 223 LKAFADHPKRALSRERLLDLADARDPDAFDRAIDVRINRIRKKVEPDPANPRFIRTVRGL 282 Query: 62 GYRFCGDLE 70 GY F D + Sbjct: 283 GYIFRPDGD 291 >UniRef50_B1ZS16 Two component transcriptional regulator, winged helix family n=3 Tax=Verrucomicrobia RepID=B1ZS16_OPITP Length = 265 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +NP ++ +R + +K+ +DV +RR+R+ E+ P P +I TI G Sbjct: 202 LELFLQNPRRVLTRTLIAEKVWEASYDLETNLIDVYVRRLRQKLEA-PGQPPLIKTIRGT 260 Query: 62 GYRF 65 GY+ Sbjct: 261 GYQL 264 >UniRef50_B6JIF2 DNA-binding response regulator OmpR n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JIF2_OLICO Length = 241 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ +R ++L + R P DR++DV I ++R+ +II T+ G Sbjct: 170 LAALVQRAGRVLTRDQILDLIANRHWTPFDRSIDVLIGKLRRKLNDNNRANQIIKTVRGA 229 Query: 62 GYRFCGDLE 70 GY F E Sbjct: 230 GYVFTLSPE 238 >UniRef50_A4G2G5 Phosphate regulon transcriptional regulatory protein PhoB n=3 Tax=Oxalobacteraceae RepID=A4G2G5_HERAR Length = 229 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P + SR +L+ ++ GR + +RTVDV + R+RK +I T+ G Sbjct: 166 LKYLLAHPNHVYSRDQLIDRVWGRHIAIDERTVDVNVLRLRKVLGE---GRYLIKTVRGV 222 Query: 62 GYRFCGD 68 GY Sbjct: 223 GYMLTEK 229 >UniRef50_Q47744 Regulatory protein vanRB n=13 Tax=Bacteria RepID=VANR_ENTFA Length = 220 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +N G+ + +L ++ G + TV I+ +R II TI G Sbjct: 157 ILLLLVQNKGRTLTHEIILSRIWGYDFDGDGSTVHTHIKNLRAKLPEN-----IIKTIRG 211 Query: 61 EGYRFCG 67 GYR Sbjct: 212 VGYRLEE 218 >UniRef50_Q97FK2 Response regulator (CheY-like receiver domain and HTH-type DNA-binding) n=2 Tax=Clostridium RepID=Q97FK2_CLOAB Length = 225 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NP K+ ++ + + + E +R V V + +R + I T+ G Sbjct: 161 ILELLISNPKKVFTKQNIFESVWSEEYILDERVVTVHVSNLRNKLKHGDT---YIKTVWG 217 Query: 61 EGYRF 65 GY+ Sbjct: 218 IGYKM 222 >UniRef50_B7K6Q7 Two component transcriptional regulator, winged helix family n=7 Tax=Cyanobacteria RepID=B7K6Q7_CYAP7 Length = 241 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHD--RTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +PGK+ SRAEL++K+ R VDV I +IR+ ++ +I T+ Sbjct: 167 LFFLASHPGKVWSRAELIEKVWKVSCSISSDLRVVDVHIGQIRRKIQAVSSRSYLIKTVR 226 Query: 60 GEGYRFC 66 G GY+F Sbjct: 227 GVGYKFE 233 >UniRef50_C7PP48 Two component transcriptional regulator, winged helix family n=20 Tax=Bacteria RepID=C7PP48_CHIPD Length = 235 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + NP ++ SR E+L+ + G + + + VDV + +RK D P +I T+ G Sbjct: 169 LEYMMRNPKRVLSRMEILENVWGVDFNMNTKVVDVYVNYLRKKVNRK-DQPALIQTVVGM 227 Query: 62 GYRFCGDL 69 GY + Sbjct: 228 GYMLKEEE 235 >UniRef50_B7K2S9 Two component transcriptional regulator, winged helix family n=2 Tax=Cyanothece RepID=B7K2S9_CYAP8 Length = 635 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 34/64 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ SR ++ ++ + P + T+ I+ +R+ ++ T +I T++G Sbjct: 158 LELFLRHPQRVFSRQVIIDQIWTLDKVPGEETISSHIKALRQKLKAVGMTQNMIKTVYGF 217 Query: 62 GYRF 65 GYR Sbjct: 218 GYRL 221 >UniRef50_C9XSJ2 Two-component response regulator n=15 Tax=Clostridiales RepID=C9XSJ2_CLODC Length = 228 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L F NP I +R LL ++ +D T+ V I+R+R+ E P +P+II T+ G Sbjct: 157 LLVFISNPKSIITRVRLLDELWDAAGEFVNDNTLTVYIKRLREKIEDDPSSPQIILTVRG 216 Query: 61 EGYRF 65 GYR Sbjct: 217 TGYRL 221 >UniRef50_A3ERN0 Putative two component transcriptional regulator, winged helix family n=2 Tax=Leptospirillum sp. Group II RepID=A3ERN0_9BACT Length = 231 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +N G++ R LL + G + + DRTVDV IRR+RK + + T+ Sbjct: 165 LLALVKNSGRVLDRQMLLDLVWGADYEGTDRTVDVHIRRLRKKLGDY---QDRVQTVKQI 221 Query: 62 GYRFCGDLE 70 GY+F + Sbjct: 222 GYKFMDRED 230 >UniRef50_A6LA64 Two-component system response regulator n=12 Tax=Bacteroidales RepID=A6LA64_PARD8 Length = 228 Score = 85.5 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G + SR E+L ++ E+ DRT+DV I R+RK I T G Sbjct: 165 ILKLLLENKGNVFSREEILSRIWKDEVYVLDRTIDVNITRLRKKIGPYGKN---IVTRLG 221 Query: 61 EGYRFC 66 GY F Sbjct: 222 FGYCFE 227 >UniRef50_Q39SW2 Two component transcriptional regulator, winged helix family n=20 Tax=Bacteria RepID=Q39SW2_GEOMG Length = 233 Score = 85.1 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + GK+ + +++L+++ G + V I +R+ E P P I T G Sbjct: 165 LRLLVVHAGKVLTHSQILRQIWGVSHLEQPHVLRVNISNLRRKIEMDPSRPRHILTEPGV 224 Query: 62 GYRFCGD 68 GYR D Sbjct: 225 GYRLRSD 231 >UniRef50_B2IZ13 Sensor protein n=11 Tax=Cyanobacteria RepID=B2IZ13_NOSP7 Length = 989 Score = 85.1 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 33/70 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N ++ S +L+ + E P + V I+ +R+ ++ +++ T++G Sbjct: 158 LELFLRNSRRVFSCGMILEHLWSYEDTPQEEAVRTHIKGLRQKLKAVGAPGDLVETVYGI 217 Query: 62 GYRFCGDLED 71 GYR ED Sbjct: 218 GYRLKPLEED 227 >UniRef50_P23620 Phosphate regulon transcriptional regulatory protein phoB n=218 Tax=Proteobacteria RepID=PHOB_PSEAE Length = 229 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + + +R +LL ++ G + +RTVDV IRR+RK + ++ T+ G Sbjct: 164 LQFFMTHQERAYTRGQLLDQVWGGNVYVEERTVDVHIRRLRKALGEVYEN--LVQTVRGT 221 Query: 62 GYRFCGD 68 GYRF Sbjct: 222 GYRFSTK 228 >UniRef50_Q1IVX4 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=Q1IVX4_DEIGD Length = 225 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGK+ SR E+ +K+ E VDV I +R+ E +I T+ G Sbjct: 161 LELLARNPGKVFSRFEIEEKVW-PEYTGGSNVVDVYIGYLRRKLEE-GGERRLIHTVRGV 218 Query: 62 GYRFCGD 68 GY + Sbjct: 219 GYVLREE 225 >UniRef50_UPI0001C16F99 Multi-component Transcriptional regulator, Winged helix family n=2 Tax=Nostocaceae RepID=UPI0001C16F99 Length = 1329 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N ++ S +L + E P + V I+ +R ++ +++ T++G Sbjct: 158 LELLMRNNRRVFSCGMILDHLWSYEDTPGEDAVRTHIKGLRMKLKAAGAPHDLVETVYGI 217 Query: 62 GYRFCGDLED 71 GYR D Sbjct: 218 GYRLKPQEND 227 >UniRef50_D0MIF5 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MIF5_RHOM4 Length = 231 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ SR + +++ G D T+DVT+ +R+ + I T+ G Sbjct: 159 LRFLARHPGEVLSRTRIAEQVWGDPFYVSDNTIDVTVSGLRQKLSEATPALQ-IETVRGV 217 Query: 62 GYRFCGDL 69 GY + Sbjct: 218 GYALRLEP 225 >UniRef50_A7ZEI3 Transcriptional activator protein CopR n=9 Tax=Bacteria RepID=A7ZEI3_CAMC1 Length = 219 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+I +R ++ + + + +DV I+ IRK E I T G Sbjct: 157 ILEFLMLNKGRILTRDQIKEHVWDFDYTGGSNVIDVLIKNIRKKLGE----CEAIQTKRG 212 Query: 61 EGY 63 GY Sbjct: 213 LGY 215 >UniRef50_B8FS42 Two component transcriptional regulator, winged helix family n=5 Tax=Clostridiales RepID=B8FS42_DESHD Length = 228 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G+ +RA+L+ + + + + VT+ R+R E P +P I T++G Sbjct: 161 LRLLLENRGQTLTRAQLVDAIWTEGAEYVDENALSVTVNRLRNKLEDLPSSPRFIKTVYG 220 Query: 61 EGYRFCGD 68 GY + Sbjct: 221 IGYTWAVP 228 >UniRef50_B7HUH0 DNA-binding response regulator n=65 Tax=Firmicutes RepID=B7HUH0_BACC7 Length = 215 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F + G I +R +LL + G + +RTVD +RR+RK II T G G Sbjct: 153 KCFLSHKGMILTRKKLLDIVWGFDYFGEERTVDTHVRRLRKKVGEN-----IIKTHRGLG 207 Query: 63 YRFCGDLE 70 Y E Sbjct: 208 YSLEEQSE 215 >UniRef50_B2TIW8 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=7 Tax=Clostridium RepID=B2TIW8_CLOBB Length = 231 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L +NP K+ +R ELL K+ G + R VD+ I+RIR+ ++I TI+G Sbjct: 168 IILLMVQNPFKVFTREELLDKIWGYSFVGNTRAVDIHIKRIRQKL---VGNEDVIKTIYG 224 Query: 61 EGYRFC 66 GYR Sbjct: 225 VGYRLE 230 >UniRef50_D2BK97 Two-component system, response regulator n=5 Tax=Lactococcus lactis RepID=D2BK97_LACLK Length = 236 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GKI SR ELL+ G RT+DV I +IRK I T G Sbjct: 172 ILELLAKREGKIVSREELLQHFWGISDTAETRTIDVLISKIRKKL-----NNHYIKTKRG 226 Query: 61 EGYRFCGDL 69 GY F + Sbjct: 227 FGYYFEENE 235 >UniRef50_A7GB96 DNA-binding response regulator n=16 Tax=Bacteria RepID=A7GB96_CLOBL Length = 232 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F ENP + S ++L ++ E + T+ V IRR+R E P P+ I T+ Sbjct: 160 LCMFMENPDIVLSPEQILSRLWDCNENYIDNNTLTVYIRRLRTKIEDNPGEPQKIVTVRR 219 Query: 61 EGYRFCG 67 GY++ Sbjct: 220 MGYKWST 226 >UniRef50_A8LHM5 Two component transcriptional regulator, winged helix family n=11 Tax=Actinobacteria (class) RepID=A8LHM5_FRASN Length = 270 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NP ++ SRA++L + R+ VD + +R+ P +I T G Sbjct: 184 LRYFLHNPNRVLSRAQILAAVWDRDFDGEPTVVDQYVSYLRRKLGQHG--PPLIHTQRGF 241 Query: 62 GYRFC 66 GY Sbjct: 242 GYALR 246 >UniRef50_B6FMI5 Putative uncharacterized protein n=7 Tax=Clostridiales RepID=B6FMI5_9CLOT Length = 243 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G++ ++ +L+ + G + D TV VTI R+R+ E + I + G Sbjct: 174 LEYLMRNQGQVLTKENILETIWGVDGQFVVDNTVSVTINRLRRKIEPDGERQGYIQNVFG 233 Query: 61 EGYRFCGDLE 70 GYR Sbjct: 234 LGYRIGEKER 243 >UniRef50_UPI0001C37682 two component transcriptional regulator n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37682 Length = 233 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +N ++ + E +K+ E T++V IR +R+ E +P +I TI G Sbjct: 167 LLYMLKNKNRVIPKDEFFEKVWETEYVGDV-TLNVHIRHLREKIEDDAGSPAVIKTIWGV 225 Query: 62 GYRFCGD 68 G+ + Sbjct: 226 GFMLEDN 232 >UniRef50_Q44929 Response regulator gtcR n=8 Tax=Firmicutes RepID=GTCR_ANEMI Length = 242 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%) Query: 12 IQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLE 70 I ++ +L ++ D T+ V I R+R E P P I T+ G GY+F + Sbjct: 178 IFTKQQLFEQAWSETYWEDDNTIMVQISRLRDKIEDQPRQPVYIKTVRGLGYKFASKDD 236 >UniRef50_B8HL49 Multi-component transcriptional regulator, winged helix family n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HL49_CYAP4 Length = 652 Score = 85.1 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +PG++ SR +L++ + + P + +V ++ +R+ ++ + I I+G Sbjct: 158 LELFLRHPGQVFSRGQLVEHLWTFDDPPLEESVKAHVKGLRQKLKAAGA-VDWIENIYGI 216 Query: 62 GYRFCGDLED 71 GYR + Sbjct: 217 GYRLNPPDSE 226 >UniRef50_Q72TM3 Response regulator n=2 Tax=Leptospira interrogans RepID=Q72TM3_LEPIC Length = 227 Score = 85.1 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 34/65 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ GK+ ++ ++++ + G K ++ V + +RK E P +PE++ T G Sbjct: 160 LTFLIQHAGKVLTQEQIIRHVWGPFAKNESGSLRVHVASLRKKIELDPSSPELLLTEPGV 219 Query: 62 GYRFC 66 GYR Sbjct: 220 GYRLA 224 >UniRef50_Q63CK0 Response regulator n=95 Tax=Firmicutes RepID=Q63CK0_BACCZ Length = 254 Score = 85.1 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ SR +L++ + G + + ++RT+DV I R+R+ F+ I TI G Sbjct: 188 LFTLGSKAGRTCSREQLIEDVWGYDFEGNERTLDVHINRLREKFQEEKSKFS-IKTIRGL 246 Query: 62 GYRFC 66 GYR Sbjct: 247 GYRLE 251 >UniRef50_A7BVU1 DNA-binding response regulator PhoB n=1 Tax=Beggiatoa sp. PS RepID=A7BVU1_9GAMM Length = 130 Score = 85.1 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + ++ SR++LL + G + +RTVDV I R+RK ++ ++ T+ G Sbjct: 59 LKFFMSHINRVYSRSQLLDFVWGENVFIEERTVDVHILRLRKILKTYDAD-NMLQTVRGI 117 Query: 62 GYRFCGDLED 71 GYRF DL + Sbjct: 118 GYRFSTDLTN 127 >UniRef50_Q2G7V2 Two component transcriptional regulator, winged helix family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G7V2_NOVAD Length = 227 Score = 84.7 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+PG + SR E+L+ + G E P V+V + R+R+ + P ++ + G Sbjct: 163 VLRLLMESPGTVISRTEILRAVWGMEDDPLTNIVEVYLSRLRRKLHALG--PPVVENVRG 220 Query: 61 EGYRFCG 67 GYR Sbjct: 221 FGYRLIA 227 >UniRef50_C3XKF1 DNA-binding response regulator n=4 Tax=Campylobacterales RepID=C3XKF1_9HELI Length = 222 Score = 84.7 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 28/65 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK SR L + + R++D IR +R TP+ I ++ G Sbjct: 156 ILNLLFLHKGKPFSRNSLSQAIASIAPDSSLRSIDTHIRNLRAKLGDDAKTPKYIQSVWG 215 Query: 61 EGYRF 65 GY+F Sbjct: 216 IGYKF 220 >UniRef50_B6ITF9 TorCAD operon transcriptional regulatory protein TorR n=1 Tax=Rhodospirillum centenum SW RepID=B6ITF9_RHOCS Length = 241 Score = 84.7 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 40/70 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G++ +R +L+ ++G + P+DRT+DV + R+R+ T +P +I T G Sbjct: 170 LALLVRSGGRVVTRDQLIDAVSGTDRNPNDRTIDVLVSRLRRKMCDTGVSPRLILTEKGL 229 Query: 62 GYRFCGDLED 71 GYR D+ D Sbjct: 230 GYRLGVDVTD 239 >UniRef50_D1AFR9 Two component transcriptional regulator, winged helix family n=4 Tax=Fusobacteriaceae RepID=D1AFR9_SEBTE Length = 221 Score = 84.7 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N GK+ +R LL ++ G + +R VD I+R RK ++I T+ G Sbjct: 156 LDYIIKNKGKLLTRDMLLNEVWGYDFDGDNRVVDTLIKRTRKKLSPYG---DLIKTVRGM 212 Query: 62 GYRFCG 67 GY F Sbjct: 213 GYMFDE 218 >UniRef50_A1R850 DNA-binding response regulator n=45 Tax=Actinobacteria (class) RepID=A1R850_ARTAT Length = 253 Score = 84.7 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 35/63 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ +R LL+++ G R V+V ++R+R E P+ PE++ T+ G Sbjct: 188 LVALARKPWQVFTRELLLEQVWGYRHAADTRLVNVHVQRLRSKIERDPEAPEVVLTVRGV 247 Query: 62 GYR 64 GY+ Sbjct: 248 GYK 250 >UniRef50_D1VT63 Regulatory protein VanR n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT63_9FIRM Length = 233 Score = 84.7 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP K+ S + + + E +TV V IRRIR+ E P P I G Sbjct: 163 ILEFLMKNPNKVFSIESIYEHVWN-EPAIEAKTVTVHIRRIREKIEVDPKRPMYIQVAWG 221 Query: 61 EGYRFCGDLE 70 GY+F + Sbjct: 222 LGYKFVDNKR 231 >UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJR7_CELJU Length = 499 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F ++PG++ + +L + ++ D ++ V I +RK P +P I TI G Sbjct: 52 LLMFIDHPGEVLEKERILATIWQGKVVNDD-SLAVAISHLRKALGDNPRSPRYIKTIPGV 110 Query: 62 GYRFC---GDLED 71 GY+F +E+ Sbjct: 111 GYQFIASAAPVEE 123 >UniRef50_B9YAL6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAL6_9FIRM Length = 269 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN K+ SR +++ K+ + + T+ V + R+R+ E + I T G Sbjct: 204 ILQLLLENKNKVVSREKIMLKLWNNDCFVDENTLTVNVNRLRRKMEQLGID-DCIETRKG 262 Query: 61 EGYRF 65 GY+ Sbjct: 263 LGYQL 267 >UniRef50_C6J4Z6 Two component transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4Z6_9BACL Length = 225 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L + GK+ R +L+++ G + VDV IR +RK + +++ TI G Sbjct: 162 LLFLMKRAGKVCGRDLILQQVWGYDFSTGTNVVDVYIRHLRKKI-DKGHSRKLLHTIRGT 220 Query: 62 GYRF 65 GY F Sbjct: 221 GYMF 224 >UniRef50_B7JF46 DNA-binding response regulator n=87 Tax=Bacteria RepID=B7JF46_BACC0 Length = 225 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+ SR EL++ + G + + +RTVDV ++R+R F D + I T+ G Sbjct: 160 LSQLASYPGRTFSREELIELVWGMDFEGDERTVDVHVKRLRDRFSKRTDDFQ-ITTVRGL 218 Query: 62 GYRFC 66 GY+ Sbjct: 219 GYKLE 223 >UniRef50_B5CLM3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLM3_9FIRM Length = 226 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +N G++ ++ +L+ + G + D +V V + R+RK E+ + P I + G Sbjct: 160 LEYLMKNQGQVLTKENILEHVWGIDGQYVVDNSVSVLVGRLRKKIEAAGERP-YIQNVFG 218 Query: 61 EGYRFCGD 68 GYR + Sbjct: 219 LGYRMEEE 226 >UniRef50_A5ZPI0 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A5ZPI0_9FIRM Length = 231 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+ G + +R+++L ++ G + DRT+D I+ +RK I T+ G Sbjct: 169 LKLLIEHKGLVLTRSQILDELWGYDYPIIDRTIDTYIKNLRKKLRLN-----CIVTVKGI 223 Query: 62 GYRFC 66 GY++ Sbjct: 224 GYKYE 228 >UniRef50_UPI00016988BE Two component Transcriptional regulator, Winged helix family protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016988BE Length = 175 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+ G++ SR L++ G E DR++DV + R+R+ E P P + T+ G Sbjct: 107 LRVFLEHSGRVLSRDMLMEITKGYERSHLDRSIDVCVNRLRRKIEPNPSEPIYLRTVWGA 166 Query: 62 GYRFCGDLE 70 GY F + E Sbjct: 167 GYLFSRNGE 175 >UniRef50_Q99U73 Response regulator arlR n=10 Tax=Firmicutes RepID=ARLR_STAAN Length = 214 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN + R ++L + G + VDV IR +R + ++I T+ G Sbjct: 151 LYLLAENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRD-KMIETVRGV 209 Query: 62 GY 63 GY Sbjct: 210 GY 211 >UniRef50_B9KBQ0 Response regulator n=6 Tax=Thermotogaceae RepID=B9KBQ0_THENN Length = 233 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N ++ ++ EL + + + T+ I+ +RK +II T+ G Sbjct: 167 ILEYLMMNKNRVVTKEELQEHLWSFDDTVFSDTLRSHIKNLRKKI-DRGFKKKIIHTVRG 225 Query: 61 EGY 63 GY Sbjct: 226 IGY 228 >UniRef50_Q04942 Transcriptional regulatory protein afsQ1 n=34 Tax=Actinomycetales RepID=AFSQ1_STRCO Length = 225 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 31/60 (51%) Query: 9 PGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGD 68 PG+ SR +LL+ + + R VD ++R+R E P +P +I T+ G GYR Sbjct: 165 PGQALSRQQLLRLVWEHDYLGDSRLVDACVQRLRAKVEDVPSSPTLIRTVRGVGYRLDPP 224 >UniRef50_Q47ZA2 DNA-binding response regulator n=20 Tax=Alteromonadales RepID=Q47ZA2_COLP3 Length = 238 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 37/67 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++Q+R + K + GRE DR+VDV I R+RK + DTP I TI G+ Sbjct: 169 LWLLAGKAGEVQNRDYIYKAVIGREYDGLDRSVDVRISRLRKKLHDSTDTPFRIKTIWGQ 228 Query: 62 GYRFCGD 68 GY F D Sbjct: 229 GYLFVPD 235 >UniRef50_A6M2A3 Two component transcriptional regulator, winged helix family n=13 Tax=Clostridium RepID=A6M2A3_CLOB8 Length = 242 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G + +R +LL ++ G + RTVDV IRR+R + + I+ T+ G Sbjct: 179 LSYLYKNKGIVFNRQQLLNEVWGYDYYGDTRTVDVHIRRLRANLGDDKEN-SIVETVFGV 237 Query: 62 GY 63 GY Sbjct: 238 GY 239 >UniRef50_D2QX61 Two component transcriptional regulator, winged helix family n=3 Tax=Planctomycetaceae RepID=D2QX61_9PLAN Length = 223 Score = 84.7 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ +R L + + + + V+V I R+R + P +I T+ G Sbjct: 158 LEFLMRYAGQVVTRKMLCEHLWESDWEGVTNVVEVHINRLRGKIDRGFSEP-LIQTVRGR 216 Query: 62 GYRFCG 67 GY Sbjct: 217 GYVLRT 222 >UniRef50_C8NR68 DNA-binding response regulator n=12 Tax=Bacteria RepID=C8NR68_COREF Length = 224 Score = 84.7 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+I SRA+LL + P VDV IR +RK E + TI G Sbjct: 165 LETLMRHPGQILSRAQLLNMVWDMSFDPGSNVVDVYIRALRKKIG-----TEKVETIRGS 219 Query: 62 GYRFC 66 GYR Sbjct: 220 GYRLV 224 >UniRef50_UPI0001C37B2E two component transcriptional regulator n=2 Tax=Clostridiales RepID=UPI0001C37B2E Length = 243 Score = 84.7 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ EN G++ ++ E L + + + T+ V IR IR+ E P+ P+II T+ G Sbjct: 176 LLYLLENRGRVVTKEEFLSNVW-EDSFIGEGTLPVHIRHIREKIEINPNEPQIIRTVWGV 234 Query: 62 GYRFCGDLE 70 GY E Sbjct: 235 GYIIGSAEE 243 >UniRef50_B3QUP3 Two component transcriptional regulator, winged helix family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUP3_CHLT3 Length = 227 Score = 84.7 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N GK+ SR LL+++ G + DRTVDV I ++R+ + I TI G Sbjct: 164 LWILATNKGKVFSREMLLRRVWGENIYVTDRTVDVHICKVRQRLGKFGEDA--IETIKGV 221 Query: 62 GYRF 65 GYR Sbjct: 222 GYRL 225 >UniRef50_A7VHB9 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=A7VHB9_9CLOT Length = 236 Score = 84.7 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + R ++ + G + + RT+D+ I+ +R+ +I T+ Sbjct: 175 LKLLMINAGIVLRREVIMMDVWGTDYEGESRTLDMHIKTLRQKLGDAG---NMIKTVRNV 231 Query: 62 GYRFC 66 GY+ Sbjct: 232 GYKME 236 >UniRef50_C1A8B6 OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8B6_GEMAT Length = 245 Score = 84.7 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ G I SR ELL+++ G + RTVD + +R+ E+ P P + T+ Sbjct: 179 LVALVRRDGAIASREELLREVWGYDDSVVSRTVDTHMAELRRKLETDPSEPRWLLTVRKT 238 Query: 62 GYRFC 66 GYR Sbjct: 239 GYRMA 243 >UniRef50_Q188S4 Putative lantibiotic resistance two-component response regulator n=6 Tax=Clostridium difficile RepID=Q188S4_CLOD6 Length = 230 Score = 84.7 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ SR ++ +K+ G + + TV +++IR F + E I+T+ G Sbjct: 163 IVELLALHAGQVFSREQIYEKVWGCDSEGDSSTVVERVKKIRAKFSAVTPEKEYISTVWG 222 Query: 61 EGYRFCG 67 GY++ Sbjct: 223 IGYKWNK 229 >UniRef50_Q187R8 Two-component response regulator n=6 Tax=Clostridiales RepID=Q187R8_CLOD6 Length = 223 Score = 84.7 bits (210), Expect = 9e-16, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN G+I + ++L + E D V V IRR+R E P P+ I T +G Sbjct: 155 LSYLIENKGQILLKEQILHHIWDSEENYVDDNIVSVNIRRLRVKVEDDPSNPKYIKTAYG 214 Query: 61 EGYRFCGDLE 70 GY + ++E Sbjct: 215 MGYLWN-EVE 223 >UniRef50_B2HJN8 Transcriptional regulatory protein n=15 Tax=Mycobacterium RepID=B2HJN8_MYCMM Length = 266 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + G+ +R L+ ++ G + RTVDV +RR+R + ++ T+ G G Sbjct: 170 HFLVRHAGQAFTRTRLMHEVWGYDCNGRARTVDVHVRRLRAKLGAD--HESMVDTVRGVG 227 Query: 63 YRFCGDL 69 Y Sbjct: 228 YMAVTPP 234 >UniRef50_C4KYM3 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4KYM3_EXISA Length = 224 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT-PEIIATIH 59 + F ++P ++ +R +L + + RTVD IR IR+ + + T+ Sbjct: 153 ILKLFLQHPNRLFNRLDLFDLVWPYSAESDPRTVDAHIRMIREKLGDAGFPIDDYLKTVW 212 Query: 60 GEGYRFCGD 68 G GYR+ + Sbjct: 213 GRGYRWTEE 221 >UniRef50_Q398T9 Two component transcriptional regulator, winged helix family n=23 Tax=Proteobacteria RepID=Q398T9_BURS3 Length = 395 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P + SR LL + GR+ DR+VDV I R+R+ E P P I T+ G Sbjct: 326 LHALGSSPNRAVSRENLLARARGRDHAALDRSVDVQILRLRQIVEDDPGKPRFIKTVWGI 385 Query: 62 GYRFCGDLE 70 GY ++ Sbjct: 386 GYMLVAGVD 394 >UniRef50_C1IA20 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IA20_9CLOT Length = 233 Score = 84.4 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C+N K+ SR +LL + G + RTVDV I R+RK + + I TI G Sbjct: 165 LTFLCKNTNKVHSRNQLLDLIWGYDFLGDTRTVDVHITRLRKKLKDNFN----IETIFGV 220 Query: 62 GYRFCGDL 69 GY Sbjct: 221 GYMLKEKD 228 >UniRef50_C0CKG8 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKG8_9FIRM Length = 223 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +N + +R ++L+K+ G + + RT+D I+ +R +S I TI G Sbjct: 159 LVYLMQNRDIVLTRDQILEKVWGFDYEGDIRTIDTHIKMLRMDLKSCGS---YIRTIRGM 215 Query: 62 GYRFCGD 68 GY + Sbjct: 216 GYTLSSE 222 >UniRef50_C3WHY2 Two-component response regulator n=8 Tax=Fusobacterium RepID=C3WHY2_9FUSO Length = 236 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F +N G SR +++ + G + ++ VDV I +RK + I TI G Sbjct: 170 ILEYFMKNKGLSCSREKIIIDVWGYDFDGEEKIVDVYINSLRKKIDLDN---RYIHTIRG 226 Query: 61 EGYRFCGDLE 70 GY F + Sbjct: 227 FGYMFQYKED 236 >UniRef50_C7R7C9 Two component transcriptional regulator, winged helix family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7C9_KANKD Length = 236 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 32/63 (50%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 F NPG++ SR LLKK+ G + RTVD I +RK D+ I T++ GY Sbjct: 165 LFLRNPGRLYSRKFLLKKVWGIDCDISTRTVDAHISSLRKKLNIKGDSLYRIKTVYQHGY 224 Query: 64 RFC 66 R Sbjct: 225 RLE 227 >UniRef50_B0S0W9 Two-component response regulator n=9 Tax=Clostridiales RepID=B0S0W9_FINM2 Length = 238 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N GK+ +R ++ K+ G + + RTVDV I +R+ ++ II TI Sbjct: 176 LYYLLSNVGKVLTRENIMTKIWGFDFEGESRTVDVHIATLRQKLKNASS---IIKTIRNL 232 Query: 62 GYR 64 GY+ Sbjct: 233 GYK 235 >UniRef50_C8WPK8 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WPK8_EGGLE Length = 236 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++PG++ R + +++ G E + + V IRRIRK + P+ + T+ G Sbjct: 170 IVAFLSKHPGQVFDRDRIHERVGGWENESDSQVVTEHIRRIRKKLAAAGAEPDPVETVWG 229 Query: 61 EGYRFCG 67 GYR+ Sbjct: 230 MGYRWRA 236 >UniRef50_Q1NLC6 Response regulator receiver n=3 Tax=Deltaproteobacteria RepID=Q1NLC6_9DELT Length = 298 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN + +R E+ K++ + R +DV I+ +R+ E TP P I T+ G Sbjct: 232 LACLMENRNHLVTREEIRKRLWRDSKIYSWSRVIDVHIQHLRQKVEETPSQPHHIVTVPG 291 Query: 61 EGYRF 65 GYRF Sbjct: 292 RGYRF 296 >UniRef50_C6D3C2 Two component transcriptional regulator, winged helix family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6D3C2_PAESJ Length = 225 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG++ SR EL++ + + + DRTVDV I+R+R+ F + I T+ G Sbjct: 158 LAQLAQYPGRLFSREELIRLVWAADFEGDDRTVDVHIKRLRQRFADYAEDFT-IQTVRGI 216 Query: 62 GYR 64 GY+ Sbjct: 217 GYK 219 >UniRef50_A6M1X5 Two component transcriptional regulator, winged helix family n=8 Tax=Firmicutes RepID=A6M1X5_CLOB8 Length = 229 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G S++ +L+K+ G + D V+V IR +R II T+ G Sbjct: 165 LSFLLMNNGIALSKSLILEKVWGYDFNGEDNIVEVYIRYLRDKIGD--KDHNIIKTVRGV 222 Query: 62 GYRFCGD 68 GY+ Sbjct: 223 GYKMVAQ 229 >UniRef50_A1VB66 Two component transcriptional regulator, winged helix family n=3 Tax=Desulfovibrio vulgaris RepID=A1VB66_DESVV Length = 242 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L EN G + +R ++K++ G + P +DV I ++R+ E P +I T+ G Sbjct: 173 LLLLMENAGTVVTRNMIVKRVWGYDFMPGSNIIDVQICQLREKTERNGA-PRVIHTMRGV 231 Query: 62 GYRF 65 GY F Sbjct: 232 GYVF 235 >UniRef50_A8VQC0 Response regulator receiver protein n=2 Tax=Bacillaceae RepID=A8VQC0_9BACI Length = 240 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++H ++P ++ SR EL++ + G + DR VD+ ++RIR+ D I TI GE Sbjct: 173 LIHLAKHPNRVWSRDELIEHVWGWDYTGSDRAVDLAVKRIRQALRKWDDEHGGIRTIRGE 232 Query: 62 GYRF 65 GY F Sbjct: 233 GYSF 236 >UniRef50_C7Q501 Two component transcriptional regulator, winged helix family n=2 Tax=Actinomycetales RepID=C7Q501_CATAD Length = 242 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G + +R +LL ++ G + + VD + +R+ E+ D P ++ T+ G Sbjct: 164 VLEVLVRNAGAVLTRDQLLDRVWGYDFQVRSDAVDTVVSYLRRKLEAD-DRPRVLHTVRG 222 Query: 61 EGYRFCGDLE 70 G+ G LE Sbjct: 223 VGFALRGGLE 232 >UniRef50_A7BB43 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=A7BB43_9ACTO Length = 247 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++ +R LL + G + R VD IR IR P P I T+ Sbjct: 178 LDYLMTHPGELHTRERLLSVLWGIDFASSTRAVDHRIREIRAALGEDPSDPVFIETVPSV 237 Query: 62 GYRFCGDL 69 GYRF G + Sbjct: 238 GYRFIGRV 245 >UniRef50_A8LWI8 Two component transcriptional regulator, winged helix family n=3 Tax=Actinomycetales RepID=A8LWI8_SALAI Length = 224 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + GK+ +R +LL + E + + TVDV + +R+ + TP + T+ G Sbjct: 155 LTYLAQRAGKVVTRRQLLDHVWRSEGRSLE-TVDVHVTWLRRKLGESASTPRYLHTVRGV 213 Query: 62 GYRFCGDLE 70 G R + Sbjct: 214 GIRLGAPED 222 >UniRef50_C8WIG3 Two component transcriptional regulator, winged helix family n=36 Tax=Bacteria RepID=C8WIG3_EGGLE Length = 248 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+I + L + G ++ ++ IRR+R+ E+ P P + T G Sbjct: 181 ILSVLARNAGRIVTIDSLCEACWG-TSFGYENSLMAHIRRLREKIEADPSAPVSLVTARG 239 Query: 61 EGYRFCG 67 GY+ Sbjct: 240 LGYKLVE 246 >UniRef50_B0G7M7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0G7M7_9FIRM Length = 231 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ENP I S+ EL K+ R D T+ V I+++R E P P I T+ G+ Sbjct: 167 LYLFIENPEYIFSKQELFSKVW-RSDNCDDSTILVYIKKLRDKLEDDPSHPTHICTVWGK 225 Query: 62 GYRF 65 GY+F Sbjct: 226 GYKF 229 >UniRef50_Q0IAU4 Two-component response regulator n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IAU4_SYNS3 Length = 199 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F +NPG + +R ++ + G+ D +DV IR +RK E P ++I T+ G Sbjct: 136 LVYFLQNPGMVLARKTIMNNVWGQSWTGDDNLLDVYIRYLRKKIER-PKLEKLIQTVRGV 194 Query: 62 GYRF 65 GY Sbjct: 195 GYIL 198 >UniRef50_B6BWN6 Two component transcriptional regulator, winged helix family n=1 Tax=beta proteobacterium KB13 RepID=B6BWN6_9PROT Length = 237 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 37/65 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F EN + SR ++++ G+EL DR++DV I RIRK E P+ P+ + T G Sbjct: 168 LKVFIENANQPLSRDQIMQLAKGKELDVFDRSIDVQISRIRKLIEEDPNKPKYLKTKWGF 227 Query: 62 GYRFC 66 GY F Sbjct: 228 GYVFE 232 >UniRef50_Q2JGV9 Response regulator receiver protein n=1 Tax=Frankia sp. CcI3 RepID=Q2JGV9_FRASC Length = 171 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 6/73 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTG----RELKPHDRTVDVTIRRIRKHFESTPDTPEIIA 56 + F +PG+ SR LL + G E P RTVDV + R+R+ P+ + I Sbjct: 96 VLDFFVRHPGQAYSREALLCSVWGHQVDDESAPDIRTVDVLVTRLRRKLG--PEHRDRIE 153 Query: 57 TIHGEGYRFCGDL 69 TI GYR+ Sbjct: 154 TIRRVGYRYRPAD 166 >UniRef50_P50351 Transcriptional regulatory protein chvI n=188 Tax=cellular organisms RepID=CHVI_RHISN Length = 241 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 36/67 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG ++SR L+ ++ DRT+D I+R+RK F+ ++I T++G Sbjct: 173 ILHSLAQRPGVVKSRDALMDAAYDEQVYVDDRTIDSHIKRLRKKFKMVDVDFDMIETLYG 232 Query: 61 EGYRFCG 67 GYRF Sbjct: 233 VGYRFRE 239 >UniRef50_A5MZ62 Transcriptional regulator n=27 Tax=Bacteria RepID=A5MZ62_CLOK5 Length = 228 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N SR +L+K+ G + VDV IR +R + I TI G Sbjct: 163 LKYLMVNKDIALSRENILEKVWGYDYLGDTNIVDVYIRYLRSKI-DDKFNKKYIYTIRGL 221 Query: 62 GYRFCGD 68 GY+F + Sbjct: 222 GYQFRYE 228 >UniRef50_Q7UPW2 Two-component response regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UPW2_RHOBA Length = 268 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ENP ++ +R+ELL ++ R VD I R+RK E +P P + T+ Sbjct: 191 LRYFVENPERVINRSELLTQVWEMSGNLQTRAVDQFIARLRKAIEPSPAEPVHLLTVRDA 250 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 251 GYRFVLEPE 259 >UniRef50_C8P150 Regulatory protein VanR n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P150_ERYRH Length = 231 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + NPG+I + +L + + TV V IR +RK E P+ P+I+ + Sbjct: 163 ILRLLLGNPGRIYTMEQLFEIVWEDTYFYSCSNTVMVHIRNLRKKVEDEPNKPKIVKNVW 222 Query: 60 GEGY 63 G+GY Sbjct: 223 GKGY 226 >UniRef50_UPI0001973D88 response regulator DrrA n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001973D88 Length = 162 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 NP ++ + LL + + + R ++ I +RK PD P+ + +++ Sbjct: 95 IFALLILNPKRVFTYEMLLDLVWHEDYSYYSRKAINNHISNLRKKLRVAPDLPDYVKSVY 154 Query: 60 GEGYRFC 66 G GY+F Sbjct: 155 GVGYKFE 161 >UniRef50_Q1GKH2 Two component transcriptional regulator, winged helix family n=28 Tax=Rhodobacterales RepID=Q1GKH2_SILST Length = 239 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F E+P ++ SRA++++++ G DR +DV I R+R P P +I TI+G Sbjct: 168 VLRLFLESPKRLISRAQMMERLGGGAGDSFDRAMDVRISRLRTKLREDPKNPRLIKTIYG 227 Query: 61 EGYRFCGDL 69 GY F GD+ Sbjct: 228 AGYIFLGDV 236 >UniRef50_C4Z360 Two-component system, OmpR family, response regulator ResD n=12 Tax=Bacteria RepID=C4Z360_EUBE2 Length = 220 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +N G++ S+ ++L+ + G + + +D T+ I+ IR F P I T+ G Sbjct: 156 ICEFLAKNRGQVFSKEQILEAVFGFDNESNDSTIITHIKNIRAKFADYDYMP--IKTVWG 213 Query: 61 EGYRFCG 67 GY++ Sbjct: 214 IGYKWEE 220 >UniRef50_C7MP89 Response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MP89_CRYCD Length = 243 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 6 CENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 + G+ + ++ + + P T+ V IR +RK E+ P P +I T+ G+GYR Sbjct: 182 ASHRGQTLTARKIYESIWDDAYLPQSSNTIMVHIRNLRKKLENDPRNPVVIQTVWGKGYR 241 >UniRef50_B2TI09 Two-component response regulator n=3 Tax=Clostridium botulinum RepID=B2TI09_CLOBB Length = 228 Score = 84.4 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ NP K+ +R ELL ++ G + K RT+DV I+R+R+ FE P+ I T+ + Sbjct: 164 LVFLINNPNKVFTRKELLDEIWGNDYKSDCRTIDVHIKRLREKFE--PNENYKIITLWRK 221 Query: 62 GYRF 65 GY+F Sbjct: 222 GYKF 225 >UniRef50_Q1IHU2 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHU2_ACIBL Length = 323 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + G++ +R E+ +K+ + D +++ I ++R T P I T+ Sbjct: 80 VLALLLDRAGQVVTREEIQQKLWPADTFVDFDHSLNTAINKLRDVLGDTASNPRFIETLP 139 Query: 60 GEGYRFCGDLE 70 GYRF +E Sbjct: 140 RRGYRFIAPVE 150 >UniRef50_C8UTJ5 Two-component response regulator n=9 Tax=Lactobacillus RepID=C8UTJ5_LACRG Length = 227 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P ++ +++L + + G D T++V I +R P+ I +I G Sbjct: 163 LALMMRDPHQVFDKSQLYEHVWGEPFLNADNTLNVHISNLRTKINELAHDPKYIISIWGI 222 Query: 62 GYRFC 66 G R Sbjct: 223 GVRLI 227 >UniRef50_Q0TP36 DNA-binding response regulator n=142 Tax=Bacteria RepID=Q0TP36_CLOP1 Length = 223 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ N G SR +L + G + RTVD I+R+R+ IAT+ G Sbjct: 160 LIYLSSNEGIALSRDRILDNVWGYDYFGDIRTVDTNIKRLREKLLD---KANYIATVRGS 216 Query: 62 GYRFC 66 GY+F Sbjct: 217 GYKFE 221 >UniRef50_C8WMT6 Two component transcriptional regulator, winged helix family n=2 Tax=Coriobacteriaceae RepID=C8WMT6_EGGLE Length = 226 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G + S+ L K+ G V+V + +RK T I TI G Sbjct: 157 ILEYLVSHQGSLISKERLFDKIWGFMSDTSSNVVEVYVSALRKALAPTGYD-RYIKTIRG 215 Query: 61 EGYRFCGDLED 71 GY F D D Sbjct: 216 AGYLFTEDDHD 226 >UniRef50_D2QKB6 Two component transcriptional regulator, winged helix family n=11 Tax=Bacteroidetes RepID=D2QKB6_9SPHI Length = 230 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N G++ SR ++ +K+ +DV + +RK + T ++I T+ G Sbjct: 165 LDYLMRNRGRVVSRVDIAEKVWDIHFDTGTNVIDVYVNFLRKKIDKDFPT-KLIHTVIGM 223 Query: 62 GYRFCGD 68 GY D Sbjct: 224 GYMLKED 230 >UniRef50_A9AWE4 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWE4_HERA2 Length = 975 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 32/64 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + G++ + LL+++ G+ + IRR+R E P P++I + G Sbjct: 165 LKLFIQYHGQVLTHRMLLQQVWGKSYSEDRAYLHAYIRRLRAKLEDDPTNPQLIHSESGI 224 Query: 62 GYRF 65 GYRF Sbjct: 225 GYRF 228 >UniRef50_D1CTN9 Phosphate regulon two component response regulator PhoB (Fragment) n=1 Tax=Sinorhizobium terangae RepID=D1CTN9_SINTE Length = 162 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H P ++ SR EL+ + G + R VDV I RIRK P I T+ GE Sbjct: 89 LQHLIARPRQVFSRDELIAAVWGYNIHVVPRAVDVHISRIRKALNEFG-EPNYIRTVRGE 147 Query: 62 GYRFCGDL 69 GY D+ Sbjct: 148 GYSIDSDI 155 >UniRef50_B5HID4 Two-component system response regulator n=3 Tax=Streptomyces RepID=B5HID4_STRPR Length = 285 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+PG + +R +++ ++ RT+DV + +R+ I T+ G Sbjct: 194 LALLAEDPGAVYTRRQIIDQVWDPHFHGPTRTLDVHVATLRRKLGDA----RWIETVRGV 249 Query: 62 GYRFCGDL 69 G+R + Sbjct: 250 GFRLADHV 257 >UniRef50_D0LJX0 Two component transcriptional regulator, winged helix family n=43 Tax=Bacteria RepID=D0LJX0_HALO1 Length = 243 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F G++Q+R LL + G E RTVD ++R+R+ + T+ G Sbjct: 173 LYAFISRRGRVQTRDALLSDVWGIEADVTTRTVDTHVKRLREKLGDAG---RYVETLRGV 229 Query: 62 GYRFC 66 GYRF Sbjct: 230 GYRFR 234 >UniRef50_A9FZS4 Response regulator n=2 Tax=Myxococcales RepID=A9FZS4_SORC5 Length = 270 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 37/58 (63%) Query: 10 GKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 G+ SR E+L+K+ G E P +RTVD I ++RK E +PD PE I T++G GY+ Sbjct: 213 GQPVSREEILQKIWGIEAGPSNRTVDNFIVKLRKKIERSPDKPEHILTVYGFGYKLAP 270 >UniRef50_C6WE10 Putative two component transcriptional regulator, winged helix family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WE10_ACTMD Length = 170 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LH CE+P ++ R L+ ++ G RTVDV IRRIR+ I+T+ G Sbjct: 86 LLHLCEHPDRVHRRHALMHRVWGASPVVDTRTVDVHIRRIRRKLGDAA---RFISTVRGV 142 Query: 62 GYRFC 66 GYR Sbjct: 143 GYRLE 147 >UniRef50_C1F979 DNA-binding response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F979_ACIC5 Length = 234 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SRA LL+++ + VDV + +R+ P +I T+ G Sbjct: 158 LECLMLHRGRPVSRARLLEEVWHESAENGTNIVDVYVNYLRRKLGDEGPAP-LIQTVRGL 216 Query: 62 GY 63 GY Sbjct: 217 GY 218 >UniRef50_B7IIP6 Transcriptional regulatory protein ResD n=34 Tax=Bacteria RepID=B7IIP6_BACC2 Length = 221 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N K+ +R +++K+ G + R +D I+ +RK I TI G Sbjct: 160 ILQLLFQNERKVLTRENIVEKVWGYDYFGETRIIDTHIKNLRKKL-----AIPYIKTIKG 214 Query: 61 EGYR 64 GY+ Sbjct: 215 IGYK 218 >UniRef50_A0PWB4 Response regulator mprA n=284 Tax=Bacteria RepID=MPRA_MYCUA Length = 232 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ +R+ +L+++ G + ++V + +R+ E+ P +I T+ G Sbjct: 165 LEMLIANPRRVLTRSRILEEVWGFDFPTSGNALEVYVGYLRRKTEAEG-EPRLIHTVRGV 223 Query: 62 GYRFCG 67 GY Sbjct: 224 GYVLRE 229 >UniRef50_C7TGP3 Two-component response regulator n=8 Tax=Lactobacillus RepID=C7TGP3_LACRL Length = 226 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 NPG++ SR +L +K+ G + + +R + IRRIR I T+ G GY+ Sbjct: 165 LSLNPGQVFSREQLYEKIWGYDAQGDERVITEHIRRIR-KLFDACQVTSPIVTVWGVGYK 223 Query: 65 F 65 + Sbjct: 224 W 224 >UniRef50_B5VWD3 Multi-component transcriptional regulator, winged helix family n=2 Tax=Arthrospira RepID=B5VWD3_SPIMA Length = 628 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N + S ++L K+ + P TV I+ +R+ ++ E I T++G Sbjct: 158 LELLMGNRQRTFSIDKILDKLWTFDDPPSANTVRAHIKGLRQKLKAAGAGAEFIETVYGL 217 Query: 62 GYRFCGDLE 70 GYR +LE Sbjct: 218 GYRLNQNLE 226 >UniRef50_B0SY74 Two component transcriptional regulator, winged helix family n=2 Tax=Caulobacter sp. K31 RepID=B0SY74_CAUSK Length = 235 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK+ + +LL + G + + V + ++R+ E+ P TP +I T G Sbjct: 168 VLARLAQARGKVLTHKDLLTAVWGPAHAQDTQYLRVFVGQLRQKLEADPSTPRMILTEPG 227 Query: 61 EGYRFCGD 68 GYRF GD Sbjct: 228 IGYRFIGD 235 >UniRef50_D1X187 Two component transcriptional regulator, winged helix family n=4 Tax=Streptomyces RepID=D1X187_9ACTO Length = 236 Score = 84.0 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P ++ SR LL+++ G + RTVDV + +RK E P PE + T+ G Sbjct: 161 ILAALAAGPDRVFSRQRLLEELHGFDRYISARTVDVHVMNLRKKIERAPRRPERLLTVFG 220 Query: 61 EGYRFCGDLE 70 GY+ + Sbjct: 221 VGYKLTDPAK 230 >UniRef50_Q2IUG0 Two component transcriptional regulator, winged helix family n=207 Tax=Bacteria RepID=Q2IUG0_RHOP2 Length = 257 Score = 84.0 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + G++ SR EL++ + ++ T++V + RIRK + II T+ G Sbjct: 186 LAYLMHHSGRVVSRTELVEHLYDQDFDRDSNTIEVFVGRIRKKLDVD-----IIQTVRGL 240 Query: 62 GYRFCGDLED 71 GY D Sbjct: 241 GYLLTPPPAD 250 >UniRef50_A4J7U5 Two component transcriptional regulator, winged helix family n=89 Tax=Firmicutes RepID=A4J7U5_DESRM Length = 239 Score = 84.0 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 38/71 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N K SR ++L ++ GR + VDV IRRIR+ E+ P P + + G Sbjct: 166 IIKLFLHNVDKAISRDDILNQIWGRHYIGDLKIVDVNIRRIRQKIENDPSNPATLEKVWG 225 Query: 61 EGYRFCGDLED 71 GYR+ G +E+ Sbjct: 226 YGYRWRGGVEN 236 >UniRef50_C5AL42 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Burkholderia glumae BGR1 RepID=C5AL42_BURGB Length = 229 Score = 84.0 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 + ++PG++ SR LL ++ G RTVD + R+RK + + I+G GY Sbjct: 161 YMFQSPGQLLSRDHLLNRVWGVHADVDTRTVDTHVSRLRKKLQLDGSNGWKVIPIYGYGY 220 Query: 64 R 64 R Sbjct: 221 R 221 >UniRef50_C9XRU4 Two-component system response regulator n=12 Tax=Clostridium RepID=C9XRU4_CLODC Length = 278 Score = 84.0 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N KI + L +++ G D T+ V IR IR+ E P P+I+ T+ G Sbjct: 210 LSYMAQNVNKIIGKERLYEQVWGVYSSICDNTIMVHIRHIREKIEDNPSNPKILITVKGL 269 Query: 62 GYRFCGDLE 70 GY+ ++ Sbjct: 270 GYKLVNRID 278 >UniRef50_UPI0001787E68 two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787E68 Length = 239 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L G++ +R ++LK++ + VDV I +R+ +++ TI G Sbjct: 162 LLFLARRQGQVCTREDILKQVWDYDFHTGTNVVDVYILHLREKI-DRGRKQKLLRTIRGA 220 Query: 62 GYRFCGDLE 70 GY+ E Sbjct: 221 GYKLLSQEE 229 >UniRef50_C0ET35 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ET35_9FIRM Length = 231 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F ++ G I SR ++L + G + R+VD ++++R I T++G Sbjct: 169 LEYFVKHKGMILSRDKILDSVWGFDYIGGYRSVDTLVKKLRAKL---TKEYPYIKTVYGV 225 Query: 62 GYRFC 66 GY F Sbjct: 226 GYCFD 230 >UniRef50_A5EYW4 Transcriptional regulator n=31 Tax=Bacteria RepID=A5EYW4_VIBC3 Length = 224 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F PG I SR +L + G P VDV +RR+RK P +I T G Sbjct: 158 ILELFLRKPGHIFSRERILANVWGIHQDPLTNVVDVYMRRLRKKI-DMPFAQPLIQTKRG 216 Query: 61 EGYRF 65 GY Sbjct: 217 MGYYL 221 >UniRef50_B1HXG4 DNA-binding response regulator n=2 Tax=Bacillaceae RepID=B1HXG4_LYSSC Length = 223 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ +R+ +++++ G + ++T++ ++R+R+ EII T+ G Sbjct: 157 LALLASRPNQVFTRSYIMEQVWGYDYDGDEQTLNTHVKRVRERLNRFDTAVEII-TVRGV 215 Query: 62 GYRFCG 67 GY+ Sbjct: 216 GYKLEA 221 >UniRef50_C4XS15 OmpR family two-component response regulator n=2 Tax=Desulfovibrio RepID=C4XS15_DESMR Length = 223 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NPGK+ S+ +++ + P VDV + R+R + +++ T+ G Sbjct: 159 LEYFMRNPGKVLSKTMIMEHVWDYHFDPQTNLVDVLVCRLRNKIDRD-YDRKMLHTLRGV 217 Query: 62 GYRF 65 GY Sbjct: 218 GYVL 221 >UniRef50_A5GA68 Two component transcriptional regulator, winged helix family n=8 Tax=Desulfuromonadales RepID=A5GA68_GEOUR Length = 243 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 33/69 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + G+ R LL+ + G RT+D I R+RK+FE P P T+ G Sbjct: 167 LSLFFQKEGEAIPRKTLLESVWGYSSDAETRTLDNFIVRLRKYFEPDPAKPVYFQTVRGV 226 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 227 GYRFSREAR 235 >UniRef50_A7GLY2 Two component transcriptional regulator, winged helix family n=9 Tax=Firmicutes RepID=A7GLY2_BACCN Length = 220 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N K+ +R +++++ G E R +D I+ IRK I T+ G Sbjct: 159 ILQLLLKNKRKVITRENIVERVWGYEPYGETRIIDTHIKNIRKKL-----NTPYIKTVKG 213 Query: 61 EGYRFCG 67 GY+ G Sbjct: 214 IGYKIDG 220 >UniRef50_Q3ZVS3 DNA-binding response regulator n=4 Tax=Dehalococcoides RepID=Q3ZVS3_DEHSC Length = 230 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G++ + LL+K+ G E + I +R E P+ P+II T G Sbjct: 163 LALLARNSGQVLTYRMLLEKVWGTEYSGDLNLLKKHIHNLRAKIEVNPEYPKIIVTERGL 222 Query: 62 GYRFC 66 GY Sbjct: 223 GYSLI 227 >UniRef50_A0RL52 DNA-binding response regulator n=93 Tax=Firmicutes RepID=A0RL52_BACAH Length = 241 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F NP ++ R ELL+K+ G E + R VD+ ++R+RK ++ E I TI+G G Sbjct: 180 QLFVSNPQRVFMRDELLEKVWGFEYIGNTRAVDIMVQRLRKKL---GNSGEYIKTIYGVG 236 Query: 63 YRFC 66 Y+ Sbjct: 237 YKLD 240 >UniRef50_Q6MA20 Putative two-component response regulator phoP n=2 Tax=Parachlamydiaceae RepID=Q6MA20_PARUW Length = 229 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GK+ +R +LL + E DR +DV I +RK D I T+ G Sbjct: 164 ILRRLLLNRGKVLTRNQLLDDVQNDEAFIIDRNIDVHIASLRKKLGPNFDG---IETVRG 220 Query: 61 EGYRFCGDL 69 GYRF D Sbjct: 221 VGYRFKDDE 229 >UniRef50_Q88HA6 Transcriptional regulatory protein RstA, putative n=5 Tax=Pseudomonas RepID=Q88HA6_PSEPK Length = 279 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 36/64 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ N G++ +R +L+++ G E DR+VDV I ++R+ F+ I T+ G+ Sbjct: 209 LVVLARNAGEVMNRDRILQQLRGIEFNGTDRSVDVAISKLRRKFDDNAGEARKIKTVWGK 268 Query: 62 GYRF 65 GY F Sbjct: 269 GYLF 272 >UniRef50_Q83N47 Two-component system response regulator n=8 Tax=Actinobacteridae RepID=Q83N47_TROWT Length = 251 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F NP ++ S++++L + + V+ I IR+ + II T G Sbjct: 186 LRYFMLNPNRVLSKSQILGHVWDYDFDGDSSIVESYISYIRRKLAAYSSE-TIIHTKRGF 244 Query: 62 GYRFCG 67 GY Sbjct: 245 GYIMRT 250 >UniRef50_C6PQ36 Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQ36_9CLOT Length = 233 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + SR ++L + + RTVD I+RIRK + ++I T++G Sbjct: 163 LYLLLSNSGTVYSREQILNIIWNMDYAGGTRTVDTHIQRIRKKLGNN--YQDLIQTVYGI 220 Query: 62 GYR 64 GY+ Sbjct: 221 GYK 223 >UniRef50_A1S1W0 Response regulator receiver protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1W0_SHEAM Length = 237 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G+I R +L K TG +RT+D I R+R+ D P I TI G Sbjct: 167 ILAQLAKHAGQIVCREDLFKYTTGAPYDGLNRTMDNRISRLRRKLGDNMDDPFKIKTIWG 226 Query: 61 EGYRFCGDL 69 +GY F D+ Sbjct: 227 KGYLFVPDI 235 >UniRef50_C8VYB2 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYB2_DESAS Length = 236 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PGK SR LLK+ ++ RTVDV IRRIR+ E + I T G Sbjct: 168 LYFLACQPGKYFSRYFLLKQFWEFDVSNDSRTVDVHIRRIRQKLEILNANQQYIETARGV 227 Query: 62 GYRFCG 67 GYRF Sbjct: 228 GYRFIE 233 >UniRef50_B9JNY4 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNY4_AGRRK Length = 226 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + NPG + +R ++L + G R VDV I R+RK + +II TI G Sbjct: 162 ILEFLMRNPGTVHTRTDVLTNVWGPHATVDPRVVDVHIGRLRKCIS-NSENDDIIRTIRG 220 Query: 61 EGYRF 65 GY Sbjct: 221 AGYAL 225 >UniRef50_C3M7Y9 Transcriptional regulator n=27 Tax=Vibrionaceae RepID=C3M7Y9_VIBC3 Length = 223 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L +NPG++ R ELL + G + P RTVD I +R+ I T+ G Sbjct: 160 LLMLLQNPGRVYHRDELLNLIWGYQYFPTTRTVDNHILHLRQKLPQLD-----IETLRGV 214 Query: 62 GYRFCG 67 GYR G Sbjct: 215 GYRLKG 220 >UniRef50_A6BKE3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BKE3_9FIRM Length = 221 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G + ++ +L+ + G + D TV VTI R+RK E+ +P + + G Sbjct: 154 LEYLMYNQGNVLTKENILEYVWGLDGQFVVDNTVSVTINRLRKKIETDAGSPIYLKNVFG 213 Query: 61 EGYRFC 66 GY+ Sbjct: 214 LGYKLE 219 >UniRef50_C9Y9A3 Transcriptional regulatory protein ompR n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9A3_9BURK Length = 274 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 38/67 (56%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F + P ++ SR +L+++ GR + +R++D+ + R+R+ PD P +I T+ G Sbjct: 198 LNTFLQTPRRLFSRDQLMEQARGRAMDAFERSIDLLVSRLRQKLADDPDEPSMIKTVRGA 257 Query: 62 GYRFCGD 68 GY F Sbjct: 258 GYMFNVQ 264 >UniRef50_B0G6B9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6B9_9FIRM Length = 133 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +P ++ ++ ++ + + D V ++ +RK E P+ P I TI G Sbjct: 68 LFYLALSPNRVFTKEQIYQHIYEDVESEVDNRVYGLVKNLRKKIEENPEEPHYIETIRGV 127 Query: 62 GYRFCG 67 GYRF Sbjct: 128 GYRFRA 133 >UniRef50_C6D0Z2 Two component transcriptional regulator, winged helix family n=4 Tax=Bacillales RepID=C6D0Z2_PAESJ Length = 231 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L G+I +RAELL+ + G + RTVD I+R+RK ++ ++I T+ G Sbjct: 167 LLALLGVRGRIFTRAELLESVWGYDFPGDMRTVDTHIQRLRKKLDAA----DLITTVFGI 222 Query: 62 GYRFCGDLE 70 GY+F E Sbjct: 223 GYKFEKRTE 231 >UniRef50_Q3A1Q2 Two component transcriptional regulator, winged helix family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1Q2_PELCD Length = 240 Score = 83.6 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G I R + +++ G DR++DV++ R+RK I T+ G+ Sbjct: 171 LTLLAGHAGTILDRDTINRRLRGIPYDGIDRSIDVSVSRLRKKLGDQKGHHSRIKTVWGK 230 Query: 62 GYRFCGD 68 GY F D Sbjct: 231 GYLFVPD 237 >UniRef50_Q2RPG3 Two component transcriptional regulator, winged helix family n=8 Tax=Alphaproteobacteria RepID=Q2RPG3_RHORT Length = 229 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 5/68 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G+ SR++++ + R+ +DV + R+R+ + +I T+ G Sbjct: 157 ILTYLLLRQGQTVSRSDIVDHVYDRDSDRDSNVIDVLVGRLRRKLGA-----PLIHTVRG 211 Query: 61 EGYRFCGD 68 GYR + Sbjct: 212 LGYRLEAE 219 >UniRef50_C0CLW6 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CLW6_9FIRM Length = 228 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 28/64 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E P KI S+A L + + E D T++V I +R E I T+ G Sbjct: 160 LRLLMEFPDKIFSKANLFQSVWNMEYISEDNTLNVHISNLRSKLRKICPDREFIDTVWGI 219 Query: 62 GYRF 65 GYR Sbjct: 220 GYRM 223 >UniRef50_B5VW75 Multi-component transcriptional regulator, winged helix family n=3 Tax=Arthrospira RepID=B5VW75_SPIMA Length = 621 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +NP +I SR +++ ++ + +P + V I+ +R+ + +IIAT++G Sbjct: 159 LLLFLKNPQRIFSRQDIIDQLWSFDNEPSEYAVTNLIKDLRRTLKDAGMMGDIIATVYGL 218 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 219 GYRLNPPPE 227 >UniRef50_C9Z8Q7 Putative two-component response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z8Q7_STRSW Length = 251 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + ENPG++ SR ++ +++ + VD I +R+ + +I T+ G Sbjct: 188 LRYLMENPGRVLSRGQIQERVWNHRDEGSG-VVDTYIYYLRRKLGEPGQS--LIRTVRGV 244 Query: 62 GYRFCG 67 GY+ C Sbjct: 245 GYQLCT 250 >UniRef50_B0ACA3 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACA3_9CLOT Length = 222 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN ++ +R +LL + G + R VD I+ IRK I T+ G Sbjct: 159 ILKSLIENYPQVVTREKLLDSIWGYDYFGDTRIVDAHIKNIRKKIIL-----PYIKTVKG 213 Query: 61 EGYRFCGDL 69 GY D+ Sbjct: 214 IGYTLQKDI 222 >UniRef50_A5FVA6 Two component transcriptional regulator, winged helix family n=6 Tax=Bacteria RepID=A5FVA6_ACICJ Length = 244 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + G++ +R LL+ + P V+ + R+R + E++ T+ G Sbjct: 179 VLEYLMRHAGRVVTRTMLLEDVWNFHFDPRTSVVESHVSRLRAKLGA---GRELLHTVRG 235 Query: 61 EGYR 64 GYR Sbjct: 236 AGYR 239 >UniRef50_C6X1B3 Phosphate regulon transcriptional regulatory protein phoB n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X1B3_FLAB3 Length = 227 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K+ R E+L+K+ G ++ +RT+DV IRR+R+ I T+ G Sbjct: 167 LYLLASNTNKVFKREEILEKVWGNDVIVGERTIDVHIRRLREKLGIGT-----IQTLKGI 221 Query: 62 GYRFC 66 GY+ Sbjct: 222 GYKLV 226 >UniRef50_B9XE94 Two component transcriptional regulator, winged helix family n=2 Tax=Verrucomicrobiales RepID=B9XE94_9BACT Length = 224 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG+I R +L+K+ + P VDV I+R+R+ P+++ T+ Sbjct: 158 LEFLMRTPGRICGRMAILEKVWDYDFDPGTNLVDVYIKRLREKV-DEGFEPKLLHTVRNV 216 Query: 62 GYRFCGD 68 GY Sbjct: 217 GYVMKEQ 223 >UniRef50_Q49XM7 Response regulator arlR n=145 Tax=Bacteria RepID=ARLR_STAS1 Length = 220 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN + R +++ + G + + VDV IR +R + + I T+ G Sbjct: 156 LFLLVENRNHVLQREQIITDVWGYDTEVETNVVDVYIRYLRNKLKPFGKD-KCIETVRGV 214 Query: 62 GY 63 GY Sbjct: 215 GY 216 >UniRef50_A0RG02 Two-component response regulator n=92 Tax=Bacteria RepID=A0RG02_BACAH Length = 236 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N + +R ++ + + + + +DV +R +RK + ++I T+ G Sbjct: 169 ILEYMIRNKEVVLTRDKIEQHVWNYDYEGGSNIIDVYVRYLRKKV-DSQFETKLIHTVRG 227 Query: 61 EGYRFCGD 68 GY + Sbjct: 228 TGYVLRVE 235 >UniRef50_Q2W3Z2 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=9 Tax=Proteobacteria RepID=Q2W3Z2_MAGSA Length = 278 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 36/69 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P ++ SR +L ++ DR +DV I RIRK E+ P +P +I T++G Sbjct: 208 LTALLRAPKRVLSREQLQGAEPEKDDIAFDRAIDVRISRIRKKIEADPKSPRLIKTVYGA 267 Query: 62 GYRFCGDLE 70 GY F D+ Sbjct: 268 GYLFSADVR 276 >UniRef50_A0YRX3 Two-component response regulator n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YRX3_9CYAN Length = 624 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P +I S++ LL + + P + V I+ +R+ + + ++I T++G Sbjct: 158 LELFLRHPHRIFSQSALLDHLWSFDDPPSESAVRTQIKGLRQKLKQSGAVRDLIETVYGL 217 Query: 62 GYRF--CGDLED 71 GYR D Sbjct: 218 GYRLKSTAPPND 229 >UniRef50_B6IYL9 Two-component response regulator GltR n=1 Tax=Rhodospirillum centenum SW RepID=B6IYL9_RHOCS Length = 262 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E G++ SR +LL G DR+VDV I R+R+ + PD P +I T+ Sbjct: 192 LLALVERAGRVLSRDQLLDVTHGHNTPAFDRSVDVQIARLRRKIQRDPDAPPVIRTVRNA 251 Query: 62 GYRFCGDL 69 GY F + Sbjct: 252 GYLFAARV 259 >UniRef50_D1CGU9 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGU9_THET1 Length = 233 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK+ + LL+++ G E + TI +IR+ P P I T G Sbjct: 165 VLKCLAVHGGKVVTHRMLLREVWGSEQPADTSNLRYTITQIRRKLGDDPTHPRYILTEPG 224 Query: 61 EGYRF 65 GYR Sbjct: 225 VGYRL 229 >UniRef50_C1I9Y7 Two component transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Y7_9CLOT Length = 241 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +N ++ +R +L+ + G + RTVD ++++R+ E + + T+ Sbjct: 178 LMFLIKNKNRVFTREDLITSVWGYDFYGDTRTVDTHVKKLREKLEFFREN---LKTVWRV 234 Query: 62 GYRFCGD 68 GY + Sbjct: 235 GYSLTIE 241 >UniRef50_A2CD17 Two-component response regulator n=58 Tax=Cyanobacteria RepID=A2CD17_PROM3 Length = 268 Score = 83.2 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ + + +LK++ G E T+ V +R +R E P P I T++G Sbjct: 168 LHCLLQRHGQTVAPSLILKEVWGYEPDDDIETIRVHVRHLRTKLEPDPRKPRFIKTVYGA 227 Query: 62 GYRFCGD 68 GY Sbjct: 228 GYCLELP 234 >UniRef50_A3ER20 Putative two component transcriptional regulator, winged helix family n=2 Tax=Leptospirillum sp. Group II RepID=A3ER20_9BACT Length = 259 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +++ + + R EL+K + G + + ++V I +R+ D+P I T+ G Sbjct: 176 ILVYLVSHEDVVIRREELMKVLWGESWEVDEHNLNVHIWALRRKLGEKSDSPRFIETLRG 235 Query: 61 EGYRFCG 67 GYRF Sbjct: 236 TGYRFRS 242 >UniRef50_Q47IJ9 Two component transcriptional regulator, winged helix family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IJ9_DECAR Length = 227 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 N G++ SR ELL + +E RTVD R+RK ++ ++++++G+GYR Sbjct: 161 LLRNVGRVLSREELLTSVWSKEAGVDTRTVDTHASRLRKKLGLAGESGLMLSSVYGQGYR 220 Query: 65 FCG 67 Sbjct: 221 LDT 223 >UniRef50_C7N0P4 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N0P4_SLAHD Length = 422 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + G++ ++ EL++ G + + V +RRIRK E P P+ + T+ G Sbjct: 354 ILYTLACRAGEVVTQRELVEAAWGEDYTEQMAGLAVYVRRIRKKIEDNPAEPQFLLTVWG 413 Query: 61 EGYRF 65 EGY F Sbjct: 414 EGYTF 418 >UniRef50_B8FY05 Two component transcriptional regulator, winged helix family n=13 Tax=Bacteria RepID=B8FY05_DESHD Length = 231 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 N K+ S E+ + + P + T+ V I+ +R+ E P+ I T+ Sbjct: 165 VFRLLLLNRRKVFSAKEIYEHIWQEPFLPLSNNTIMVHIKNLRRKLEKDVGRPQYIRTVW 224 Query: 60 GEGYRFC 66 G+GY Sbjct: 225 GKGYYIE 231 >UniRef50_UPI0001C4272B hypothetical protein BpOF4_20304 n=2 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4272B Length = 231 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 32/58 (55%) Query: 8 NPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRF 65 NP ++ +R +LL K+ G + +RTVD I+ IR + + II T+ G GY+ Sbjct: 169 NPKQVFNRDQLLLKIWGVDFLGDERTVDSHIKSIRLKLKKEGLSFTIIETVWGVGYKL 226 >UniRef50_C1A1E5 Turgor pressure transcriptional regulator n=5 Tax=Actinomycetales RepID=C1A1E5_RHOE4 Length = 226 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N GK+ + ELL+++ G + V + ++R+ E P P+ + T G Sbjct: 161 LEMLVRNRGKLVGQKELLREVWGPAYDTETHYLRVYLAQLRRKLEDDPANPKHLITEAGM 220 Query: 62 GYRFC 66 GYRF Sbjct: 221 GYRFV 225 >UniRef50_C4Z9T4 Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T4_EUBR3 Length = 145 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +N GKI ++ +L+++ + V V I R+RK E+ P I + Sbjct: 78 ILELLAKNQGKIVTKEVILEQVWDIDENFVDTHAVTVVINRLRKKIENNMTEPVYIRNVF 137 Query: 60 GEGYRF 65 G GY F Sbjct: 138 GVGYTF 143 >UniRef50_Q82EB1 Transcriptional regulatory protein cseB n=29 Tax=Actinobacteria (class) RepID=CSEB_STRAW Length = 235 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F PG + SR +LL+++ R VDV ++R+R I T+ G Sbjct: 175 LLEFSSAPGTVLSRDKLLERVWDYGWGGDTRVVDVHVQRLRTKIGQD-----RIDTVRGF 229 Query: 62 GYRFCG 67 GY+ Sbjct: 230 GYKLKA 235 >UniRef50_A3Z9V3 Two-component response regulator n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z9V3_9SYNE Length = 120 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ + + +LK++ G E T+ V +R +R E P P I T++G Sbjct: 24 LHCLLQRHGQTVAPSLILKEVWGYEPDDDIETIRVHVRHLRTKLEPDPRKPRFIKTVYGA 83 Query: 62 GYRFCGD 68 GY Sbjct: 84 GYCLELP 90 >UniRef50_D1VJ14 Two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VJ14_9ACTO Length = 284 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +PG++++R E+ +++ G + +DV I +R+ PE+I T++G Sbjct: 218 LAYLAADPGRVRTRREIFQEIWGP-WFGSTKVLDVHIGSLRRKLGR----PELIETVYGV 272 Query: 62 GYRFCGDLE 70 G+R E Sbjct: 273 GFRLADPAE 281 >UniRef50_Q2J7U7 Two component transcriptional regulator, winged helix family n=5 Tax=Actinomycetales RepID=Q2J7U7_FRASC Length = 272 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ S +L+ ++ G + ++ + I ++R+ E P P + T G Sbjct: 207 LEALVRHPGKLVSHQQLISQVWGPGVADDSSSLRLYINKLRRKLEPDPTRPRYLTTEPGL 266 Query: 62 GYRFCG 67 GYR+ Sbjct: 267 GYRYQP 272 >UniRef50_C7QZL8 Putative two component transcriptional regulator, winged helix family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QZL8_JONDD Length = 316 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H G + SR EL + ++ RT+DV +RR+R + I T+ G Sbjct: 241 LAHLVTRAGSVISRQELFASVWRTDVPSDSRTIDVHVRRLRDKLGLE----DHIITVRGA 296 Query: 62 GYRFC 66 GY+F Sbjct: 297 GYKFE 301 >UniRef50_B8IM29 Two component transcriptional regulator, winged helix family n=16 Tax=Proteobacteria RepID=B8IM29_METNO Length = 251 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 37/68 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C PG++ SR +LL GR P +R++DV + RIR+ E PE+I TI Sbjct: 181 LHAMCLRPGRVLSRDQLLDLTQGRAPGPFERSIDVLVSRIRQKIERDSRNPEMIKTIRSG 240 Query: 62 GYRFCGDL 69 GY F ++ Sbjct: 241 GYVFTPEV 248 >UniRef50_A9D5A2 Osmolarity response regulator n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D5A2_9RHIZ Length = 235 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SRA+L+++ GR+ + DR VDV I R+R+ D +I T+ G Sbjct: 167 LAAMVRSRGRPLSRAQLIERALGRDAEVTDRAVDVQIARLRRALGDRADDAGLIKTVWGV 226 Query: 62 GYRFCGD 68 GY D Sbjct: 227 GYVLVSD 233 >UniRef50_C0ZIT9 Two-component response regulator n=2 Tax=Bacillales RepID=C0ZIT9_BREBN Length = 226 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P +I +R +LL+ + G + + RT+DV I+R+R+ F +I+T+ G Sbjct: 159 LAQLASFPDRIFTRDQLLELVWGGDTESDSRTIDVHIKRLREKFTEK-TNDFVISTVRGL 217 Query: 62 GYRFC 66 GY+ Sbjct: 218 GYKLE 222 >UniRef50_B8I8Q2 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridium RepID=B8I8Q2_CLOCE Length = 231 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 25/69 (36%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ S L + + +D +V +R +R I TI G Sbjct: 163 ILRILASNRGRVYSTKMLYEIIWKEPFLENDNSVITHMRNLRDKIGDKVKDSRYIRTIWG 222 Query: 61 EGYRFCGDL 69 GY+ + Sbjct: 223 TGYKIEKED 231 >UniRef50_C6HXQ3 Two component transcriptional regulator, winged helix family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXQ3_9BACT Length = 269 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++H +PGK+ R EL+ + G + D + V I +RK D I T+ G Sbjct: 200 ILVHLVRDPGKVYPREELMSLLWGEHWEVEDHNLSVHIHGLRKKLARPEDDRTPIETVRG 259 Query: 61 EGYR 64 GYR Sbjct: 260 VGYR 263 >UniRef50_A4SHT1 Two-component system response regulator n=10 Tax=Proteobacteria RepID=A4SHT1_AERS4 Length = 218 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + ++ GK+ SR+EL+ + ++ TV+V I RIRK ++I T+ G Sbjct: 157 VLGYLMQHRGKVVSRSELIDHIYAQDFDRDSNTVEVFIGRIRKK-----THADLIETVRG 211 Query: 61 EGYR 64 GYR Sbjct: 212 LGYR 215 >UniRef50_C4I5X0 DNA-binding response regulator n=78 Tax=Bacteria RepID=C4I5X0_BURPS Length = 232 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG I S+ +L +++ + T++V + R+RK + E+I T+ G Sbjct: 171 LETLIQHPGMILSKPQLEERLYSFSDEVGSNTIEVHVSRLRKKLGA-----ELIETVRGL 225 Query: 62 GYRFCGD 68 GYR D Sbjct: 226 GYRLRRD 232 >UniRef50_B1XPE6 Two-component response regulator; transcriptional regulatory protein n=21 Tax=Cyanobacteria RepID=B1XPE6_SYNP2 Length = 267 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SR+ELL++ + + RT+D + +RK E P P +I T+ Sbjct: 161 LYVLAQANGEPLSRSELLRRAW-PDAIDNPRTIDTHVLSLRKKIEQDPRQPNLIQTVRNV 219 Query: 62 GYRFCGD 68 GYRF D Sbjct: 220 GYRFNLD 226 >UniRef50_A6VT30 Two component transcriptional regulator, winged helix family n=26 Tax=Gammaproteobacteria RepID=A6VT30_MARMS Length = 245 Score = 82.8 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP K SR E+ + + G E DR++D I +RK + P I T+ G+ Sbjct: 173 LWLLASNPEKTVSRDEISQSLRGIEYDGLDRSIDNKIVSLRKKLGDSNGLPRRIITVRGK 232 Query: 62 GYRFCGD 68 GY F D Sbjct: 233 GYLFITD 239 >UniRef50_A6TSH7 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiales RepID=A6TSH7_ALKMQ Length = 231 Score = 82.4 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 29/68 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG+ + EL K+ G + RTV V I IR E + P + G Sbjct: 160 ILSFLMQNPGQYYTPKELYYKIWGAKSYGDPRTVIVHIHNIRNKIEEDVNNPRFLKMEWG 219 Query: 61 EGYRFCGD 68 +GY F Sbjct: 220 QGYYFDPK 227 >UniRef50_C4ZEN6 Two component transcriptional regulator, winged helix family n=11 Tax=Clostridiales RepID=C4ZEN6_EUBR3 Length = 232 Score = 82.4 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N ++ +R +L ++ D T+ V +RR+R+ E+ P PE + TI G Sbjct: 163 LCLLVRNANRVVTRDIILNELWDDTGNFVDDNTLSVYVRRLREKVETNPSHPEHLITIRG 222 Query: 61 EGYRF 65 GY++ Sbjct: 223 FGYQW 227 >UniRef50_A9AUH9 Two component transcriptional regulator, winged helix family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AUH9_HERA2 Length = 229 Score = 82.4 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 28/69 (40%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P + R LL+ + G R VDV ++R+R + I T+ G Sbjct: 161 VLLQLMRQPSHVWGRLALLQTVWGTNFLGDSRIVDVCVQRLRAKINQLDANADPIQTVRG 220 Query: 61 EGYRFCGDL 69 GYR + Sbjct: 221 FGYRLKCEP 229 >UniRef50_C9ZAU5 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZAU5_STRSW Length = 464 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+PG + SR ++L ++ + +T+DV + +R+ P I T+ G Sbjct: 363 LALLTEDPGAVYSRQQILNRVWDDHYQGPTKTLDVHVATLRRKLGD----PAWIQTLRGV 418 Query: 62 GYRFC 66 G+R Sbjct: 419 GFRLA 423 >UniRef50_C7MMC5 Response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein n=2 Tax=Bacteria RepID=C7MMC5_CRYCD Length = 271 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N GKI R + +++ + D T+ V + +R + + I T G Sbjct: 163 ILSLLMRNAGKIVPRERIQEELWNSDEFIDDNTLTVNVSHLRHTLSTIGAD-DFIRTKRG 221 Query: 61 EGYRFC 66 GY F Sbjct: 222 IGYSFE 227 >UniRef50_A5VAJ0 Two component transcriptional regulator, winged helix family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VAJ0_SPHWW Length = 226 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L N I +RA LL+K+ G + +P VDV IRR+R + + I+T+ G Sbjct: 162 LLELVRNVDSIVTRAMLLEKVWGYDFEPATNLVDVHIRRLRAKLTANGG-GDPISTVRGV 220 Query: 62 GYRF 65 GY Sbjct: 221 GYLL 224 >UniRef50_B1YLJ6 Two component transcriptional regulator, winged helix family n=2 Tax=Exiguobacterium RepID=B1YLJ6_EXIS2 Length = 219 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++F E+ G+ +R ++L ++ G RTVD ++++R P + + T+H Sbjct: 155 LVYFFEHMGEALTRDQILDEVWGYTFGGDTRTVDTHVKQLRDKL---PTIKQQLKTVHRV 211 Query: 62 GYRFCG 67 GYR Sbjct: 212 GYRLEA 217 >UniRef50_A3Q549 Two component transcriptional regulator, winged helix family n=1 Tax=Mycobacterium sp. JLS RepID=A3Q549_MYCSJ Length = 246 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG + + ++L + G + V I +R+ P P ++ + G Sbjct: 180 ILATLAQRPGAVTTLQQMLDAVWGPRWAGSTAKLHVHIGNLRRKLGDNPARPLLVLNVRG 239 Query: 61 EGYRFC 66 GYR Sbjct: 240 IGYRLA 245 >UniRef50_C6LCG6 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LCG6_9FIRM Length = 224 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F ENP +I SR +LL + G + ++R VD I+++RK + +I TI Sbjct: 160 LLFFLENPKRIFSREQLLIRFWGYDFDGNERVVDNHIKKLRKLLGKSGS---MIRTIRKS 216 Query: 62 GYRFC 66 GYR Sbjct: 217 GYRME 221 >UniRef50_C0ZDJ8 Two-component response regulator n=5 Tax=Firmicutes RepID=C0ZDJ8_BREBN Length = 235 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L F N K R +LL K++ G + + T+ V I+R+R E P PE I T G Sbjct: 164 LLTFMMNAHKALKRDDLLMKVSEGEDAFFDENTLSVYIKRLRAKVEDDPKNPEFIVTQRG 223 Query: 61 EGYRFCGDL 69 GYR+ D+ Sbjct: 224 LGYRWNKDV 232 >UniRef50_A3NL94 DNA-binding response regulator n=27 Tax=pseudomallei group RepID=A3NL94_BURP6 Length = 245 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +RA+LL+ + DR VDV I R+RK E P PE+I T G Sbjct: 173 LAFFLGSPSRVVTRAQLLECTRAFD-DVFDRAVDVQIWRLRKKIEKDPKHPELIRTERGV 231 Query: 62 GYRFCGDL 69 GY F Sbjct: 232 GYYFDAKE 239 >UniRef50_C4RMB5 Two-component system response regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RMB5_9ACTO Length = 169 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NP ++ +R +LL + G E RTVDV +RR+R +T ++ T++G Sbjct: 98 LHFLAANPRRVFTRPQLLSNVWGYEHAVA-RTVDVHVRRLRAKL---GNTIPMVTTVYGV 153 Query: 62 GYRFCGDLE 70 GYR + Sbjct: 154 GYRLADEAR 162 >UniRef50_B8FQS3 Two component transcriptional regulator, winged helix family n=3 Tax=Clostridiales RepID=B8FQS3_DESHD Length = 226 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN GKI +R LL ++ G + +DR VD I+++R+ + I T+ Sbjct: 162 LKLLMENAGKIVTRETLLARIWGYDFSGNDRVVDNHIKKLRQTLGKGAEQ---IKTVVKS 218 Query: 62 GYRFCG 67 GYR Sbjct: 219 GYRLEE 224 >UniRef50_C4DQ28 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQ28_9ACTO Length = 256 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K+ SRA+LL+++ G E V+ I +R+ P +I T+ G Sbjct: 190 LTQLIRNVDKVLSRADLLRQVWGMEFDSDTSLVETYISYLRRKL--DNREPRLIRTVRGV 247 Query: 62 GYRFCGDLE 70 GY E Sbjct: 248 GYVLRRPRE 256 >UniRef50_O66657 Transcriptional regulator (PhoB-like) n=2 Tax=Aquificaceae RepID=O66657_AQUAE Length = 228 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G+ SR+ L++K+ E + +R +DV ++ IR +I T+ G Sbjct: 165 ILKTLMENFGRPVSRSSLVEKLWDYERETTERAIDVHVKHIRDKLGKYKG---LIKTVRG 221 Query: 61 EGYRFC 66 GY+F Sbjct: 222 VGYKFE 227 >UniRef50_B0RLM8 Transcriptional regulator n=6 Tax=Xanthomonas RepID=B0RLM8_XANCB Length = 1172 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ E G++ S +LL + D V TI ++R+ P I TI Sbjct: 106 VLVALAERAGEVISAEQLLIDVWHGSFYG-DNPVHKTIAQLRRKLGDDSRQPRFIETIRK 164 Query: 61 EGYRFCGDL 69 GYR + Sbjct: 165 RGYRLLPKV 173 >UniRef50_A5N339 Predicted transcriptional regulator n=4 Tax=Clostridiales RepID=A5N339_CLOK5 Length = 228 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N G+I SR +LL+++ D T+ V I R++K I+T G Sbjct: 157 VLRLLMKNAGQIVSREQLLEELWDDVSFVDDNTLTVNITRVKKKLMELGLQ-NCISTKRG 215 Query: 61 EGYRFCG 67 GY F Sbjct: 216 VGYVFDP 222 >UniRef50_Q2S740 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S740_HAHCH Length = 242 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 36/70 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + SR + +++ E DR++D+ + RIRK P P +I TI GE Sbjct: 170 LYYLARQAGSVISRDLVYREIFNLEYDGLDRSIDLRVSRIRKRLGDDPKQPRLIKTIRGE 229 Query: 62 GYRFCGDLED 71 GY F + ++ Sbjct: 230 GYLFVDNADN 239 >UniRef50_Q12RS3 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12RS3_SHEDO Length = 678 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ C+NP + SR EL+ + + ++ I ++RKH E P+ I T+ Sbjct: 34 LVYLCQNPNRAISRDELINTVW-ENRFVSEAAINRAIGQLRKHIEDDTSHPKYIRTVSKV 92 Query: 62 GYRFCGDLE 70 GYR ++ Sbjct: 93 GYRLDAVVQ 101 >UniRef50_B5IMP1 Two-component response regulator n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IMP1_9CHRO Length = 227 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ + + R ++L + G +D +DV IR +R+ + P +I T+ G Sbjct: 164 LLYLLRHKQTVLPRQQILYAVWGDSWVGNDNLLDVYIRYLRRKIDPPGLEP-LIHTVRGV 222 Query: 62 GYRFC 66 G+ Sbjct: 223 GFCLE 227 >UniRef50_A6W7C9 Two component transcriptional regulator, winged helix family n=37 Tax=Actinobacteridae RepID=A6W7C9_KINRD Length = 254 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E+P + +R +LL+++ RTVD ++ +R+ + ++ T+HG Sbjct: 187 LVCLAESPRTVLTREKLLEEVWDWADASGTRTVDSHVKALRRKLGAD-----LVRTVHGV 241 Query: 62 GYRFCG 67 GY F Sbjct: 242 GYAFEP 247 >UniRef50_A1S359 Putative transcriptional regulator, CadC n=1 Tax=Shewanella amazonensis SB2B RepID=A1S359_SHEAM Length = 729 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ E G+ SR EL++++ R + D ++ I ++R + ++I T+ Sbjct: 37 VLVCLLERAGRPVSRDELIREVW-RGGQVSDNAINRIIAQLRSALGDDARSQQVIQTVPK 95 Query: 61 EGYRFCGDLE 70 GY ++E Sbjct: 96 VGYLLIAEVE 105 >UniRef50_Q631U4 Response regulator n=1 Tax=Bacillus cereus E33L RepID=Q631U4_BACCZ Length = 229 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G++ ++ +L +K+ G + + TV I++IR I T+ G Sbjct: 161 VVKMLALHAGQVLTKEQLFEKIWGYDSESDVSTVVEHIKKIRTKLSVYDREYTYIQTVWG 220 Query: 61 EGYRFCGD 68 GY++ Sbjct: 221 IGYKWSVQ 228 >UniRef50_C5NUZ8 Response regulator ArlR n=4 Tax=Bacteria RepID=C5NUZ8_9BACL Length = 223 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +N I SR ++L + + VDV I+ IRK II T G Sbjct: 157 VLEYLMKNKESILSRDQILNHVWDYDYDGASNIVDVIIKNIRKKL-DNGTDKTIIYTKRG 215 Query: 61 EGYRFCGD 68 GY F + Sbjct: 216 LGY-FVKE 222 >UniRef50_B9T9H2 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9T9H2_RICCO Length = 104 Score = 82.4 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG I + ++LL ++ G + + + I R+R E P P+I+ T G Sbjct: 40 LMLLASKPGTIFTHSQLLAQVWGPDYIDDTHYLRIHIGRLRAKLEDQPSAPQILLTELGI 99 Query: 62 GYRFC 66 GYR Sbjct: 100 GYRLA 104 >UniRef50_A9ANV0 Two component transcriptional regulator, winged helix family n=72 Tax=Proteobacteria RepID=A9ANV0_BURM1 Length = 262 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G++ SR +L+ ++ G E DRT+D I ++R+ P+ I TI + Sbjct: 193 LWVLVCRAGEVVSRDDLMLQLRGVEFDGLDRTIDGRISKLRRKLRDDASNPQRIKTIRSK 252 Query: 62 GYRFCG 67 GY+F Sbjct: 253 GYQFSK 258 >UniRef50_C3JQ04 Transcriptional regulatory protein n=2 Tax=Rhodococcus erythropolis RepID=C3JQ04_RHOER Length = 223 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L PG++ SR L++ + G + + R VD TI +R ES P P I TI G Sbjct: 156 VLLELSTEPGRVYSRDHLIRNVWGSDHER-TRVVDATILSLRSKLESDPAKPNYIKTIRG 214 Query: 61 EGYRFCG 67 GYRF Sbjct: 215 FGYRFGP 221 >UniRef50_A4WZ32 Transposase and inactivated derivatives-like protein n=5 Tax=Alphaproteobacteria RepID=A4WZ32_RHOS5 Length = 229 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ + LL+++ G H + VT+R +RK E P P +I G Sbjct: 160 LAVLASHPGKVLTHTHLLREVWGPAHTDHVEYLRVTVRSLRKKLEEDPSAPRLIQNEPGV 219 Query: 62 GYRFCGD 68 GYR Sbjct: 220 GYRLRDP 226 >UniRef50_UPI0001787D57 two component transcriptional regulator, winged helix family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787D57 Length = 228 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P + + +LL K + T+ V + R+R+ E+ P+ P+ + + G Sbjct: 164 LRVFAEHPRHVFTYDQLLAKFW--DGVGDRHTIRVHLSRLREKIEADPNQPQFLVNVWGV 221 Query: 62 GYRFCG 67 GYRF G Sbjct: 222 GYRFEG 227 >UniRef50_A4FGQ8 Putative uncharacterized protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FGQ8_SACEN Length = 208 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L ENPG++ R LL+ + G E RTVDV +RR+R + I TI G Sbjct: 114 LLFLAENPGRVHRRGSLLRLVWGIESALSTRTVDVHVRRLR---GKCGPELDFITTIRGV 170 Query: 62 GYRFCGDL 69 GYRF G Sbjct: 171 GYRFDGAD 178 >UniRef50_A9KJT6 Two component transcriptional regulator, winged helix family n=17 Tax=Firmicutes RepID=A9KJT6_CLOPH Length = 228 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K R +L ++ G + DRT+D ++ +R+ I T+ G Sbjct: 166 LFFLIRNKNKAVPRENILTEVWGFDYCGDDRTLDTHMKLLRRSLGPYA---NFITTLRGL 222 Query: 62 GYRFCG 67 GYRF G Sbjct: 223 GYRFEG 228 >UniRef50_C6LI81 DNA-binding response regulator DltR n=2 Tax=Clostridiales RepID=C6LI81_9FIRM Length = 248 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + NP ++ SR+ + +K+ G + + VDV I +RK + T E I + G G Sbjct: 180 EYLMRNPKQVISRSRITEKIWGYDSEVEYNNVDVYISFLRKKLKHTGAHVE-IRAVRGIG 238 Query: 63 YRF 65 Y Sbjct: 239 YTL 241 >UniRef50_A9KSV1 Two component transcriptional regulator, winged helix family n=9 Tax=Firmicutes RepID=A9KSV1_CLOPH Length = 229 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P K+ S+ E+ D+T++V I IR + + + I T+ G Sbjct: 164 ILELLLLHPNKVFSKQEIYNYAWEEYFIGEDKTINVHISNIRMKLKKVTED-DYIDTVWG 222 Query: 61 EGYRFCG 67 G++ Sbjct: 223 IGFKLSK 229 >UniRef50_C6AWS7 Two component transcriptional regulator, winged helix family n=7 Tax=Rhizobiales RepID=C6AWS7_RHILS Length = 246 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L FC NP K+ +R +LL P +R++D I R+R+ E P I T+ Sbjct: 174 ILLAFCCNPNKVLTREQLLSMTHAGSAGPVERSIDAHISRVRQKIEPNLKDPTFIKTVRL 233 Query: 61 EGYRFCGDLE 70 GY F +E Sbjct: 234 GGYLFASKVE 243 >UniRef50_B6R2K8 Two component transcriptional regulator, winged helix family n=3 Tax=Proteobacteria RepID=B6R2K8_9RHOB Length = 258 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ENP + R ELL+ + G + DRTVDV I R+R+ E+ P P + T G+ Sbjct: 185 LEFLIENPNRPIDRVELLEHLGGDLSRYMDRTVDVLILRLRRKIEANPSKPVFLQTRRGK 244 Query: 62 GYRFCGDL 69 GY F + Sbjct: 245 GYVFALED 252 >UniRef50_Q6FEG0 Transcriptional regulator protein (OmpR family), response regulator in two-component regulatory system with BaeS, regulates RNA synthesis n=16 Tax=Acinetobacter RepID=Q6FEG0_ACIAD Length = 228 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHF---ESTPDTPEIIATI 58 + F E+ G++ SRA+LL + DR +D I+ +R+ T + E + + Sbjct: 157 LELFLEHLGQVYSRAQLLDHINPDSFDVADRVIDSHIKNLRRKISEAADTGNRHEWVQAV 216 Query: 59 HGEGYRFCGDLE 70 +G GYRF + Sbjct: 217 YGVGYRFEYPED 228 >UniRef50_Q21HG9 Transcriptional regulatory protein-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21HG9_SACD2 Length = 225 Score = 82.0 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 28/69 (40%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++P + S+ L R P +R++DV I RIR+ I ++ Sbjct: 149 LELLAQHPNTVLSKEYLCSHGLQRTYTPGERSIDVHISRIRQKLTDALGQTSPIKSVRNR 208 Query: 62 GYRFCGDLE 70 GY + E Sbjct: 209 GYIYSPPHE 217 >UniRef50_C2BEN4 Possible response regulator n=3 Tax=Anaerococcus RepID=C2BEN4_9FIRM Length = 215 Score = 82.0 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + EN R +L + G + + +D T+ VTI+R+R I T+ Sbjct: 150 ILEMLLENQNINLLRDRILDYVWGYDFYEVNDNTLTVTIKRLRSKLGDYGSH---IKTLR 206 Query: 60 GEGYRFCGD 68 G GYR+ + Sbjct: 207 GIGYRWDNE 215 >UniRef50_A5N5X6 Transcriptional regulator n=5 Tax=Clostridium RepID=A5N5X6_CLOK5 Length = 225 Score = 82.0 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N ++ ++ ++L ++ G + + ++V +RK II TI G Sbjct: 159 LELLARNKNQVLTKDQILDRVWGPDSDVEMNNNIEVYFSYLRKKLRRLNCN-VIIETIRG 217 Query: 61 EGYRF 65 GY Sbjct: 218 IGYCL 222 >UniRef50_D1AJ61 Two component transcriptional regulator, winged helix family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AJ61_SEBTE Length = 219 Score = 82.0 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L+ EN G I+SR ++L + G + + DR VD I++IRK + + T+ Sbjct: 156 ILLYLIENKGVIKSRDDILIHIWGYDSEVFDRVVDNHIKKIRKKLGDYS---DYVKTVVS 212 Query: 61 EGYRFC 66 GY+F Sbjct: 213 IGYKFE 218 >UniRef50_C8WHB5 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=C8WHB5_EGGLE Length = 223 Score = 82.0 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGR-ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L F ++ GK+ +R + + D T+ V ++R+R E P P +I T+ G Sbjct: 157 LLLFAQSRGKLVTREHVRNAIWDSAGEYVSDNTLSVYVKRLRDKVEDDPAEPRLILTVRG 216 Query: 61 EGYR 64 GYR Sbjct: 217 LGYR 220 >UniRef50_A8ZNT0 Two-component transcriptional regulator/diguanylate cyclase (GGDEF) n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZNT0_ACAM1 Length = 792 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 N ++ S +L+ + E P + V I+ +R+ +++ ++I T++G G Sbjct: 159 ELMMRNTRRVFSCGMILEHIWTYEDTPGEEAVRTHIKGLRQKLKASGAPTDLIETVYGIG 218 Query: 63 YRFCG 67 YR Sbjct: 219 YRLKP 223 >UniRef50_P08368 Transcriptional regulatory protein creB n=64 Tax=Proteobacteria RepID=CREB_ECOLI Length = 229 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++PG++ SR +L+ + +DRTVD I+ +R + I T G Sbjct: 163 LKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGM 222 Query: 62 GYRFCG 67 GY G Sbjct: 223 GYSLRG 228 >UniRef50_B7KB48 Multi-component transcriptional regulator, winged helix family n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KB48_CYAP7 Length = 597 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 34/70 (48%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F +P +I SR++++ ++ + P + V I+ +R+ + E+I TI+ Sbjct: 158 ILELFLRHPQRIFSRSDIIDRLWMIDESPTEAAVTNLIKDLRRKLTAAGMKEELIETIYK 217 Query: 61 EGYRFCGDLE 70 GYR + Sbjct: 218 LGYRLKSAPD 227 >UniRef50_UPI0001AEBEBF two component transcriptional regulator, winged helix family protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBEBF Length = 225 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F EN K+ SR +L ++ P VDV I R+R+ I T+ G Sbjct: 160 LYYFAENAEKVLSRERILSRVWRSHSDPLTNVVDVYISRLRQKL--HSSDAIFIETLRGN 217 Query: 62 GYRFCG 67 GYR Sbjct: 218 GYRLTT 223 >UniRef50_B1HZW1 Transcriptional regulatory protein cutR (Defective melC1 suppressor protein) n=6 Tax=Firmicutes RepID=B1HZW1_LYSSC Length = 230 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + + K+ S EL++ + E ++ I +RK E+I TI G Sbjct: 157 ILEYLMLHQNKVISSEELIEHVWDSETDLFSNSLKFHIHSLRKKIADVLGEIEVIQTIRG 216 Query: 61 EGYRFCGDLE 70 +GY + Sbjct: 217 QGYIITENDR 226 >UniRef50_B6GBG2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBG2_9ACTN Length = 278 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P + ++ +L + G D TV V + IR + T I T+ G Sbjct: 213 LEALMRQPKRAWAKQDLFEAAWGEPYAGDDSTVTVHMSNIRTKLKPTGTDA-YIKTVWGI 271 Query: 62 GYRFCGD 68 G++ + Sbjct: 272 GFKLVEE 278 >UniRef50_C0QFG8 Two-component DNA-binding response regulator n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFG8_DESAH Length = 233 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + G + +R +++ + G +R+VDVTI +RK + I T+ G Sbjct: 166 VLWFLVTKKGWVFTRGQIVDAVHGENYAVTERSVDVTIAGLRKKLGPCA---DFIETVRG 222 Query: 61 EGYRFCGDLE 70 GYRF + + Sbjct: 223 VGYRFREEAD 232 >UniRef50_C7QI13 Two component transcriptional regulator, winged helix family n=13 Tax=Actinomycetales RepID=C7QI13_CATAD Length = 241 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 35/59 (59%) Query: 9 PGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCG 67 PG++ +RA+LL+ G + +R VDV + +RK E+ P P + T++G GY+ G Sbjct: 181 PGRVFTRAQLLRHTRGFDRASTERAVDVHVLNLRKKIEANPARPTRLLTVYGVGYKLVG 239 >UniRef50_C6B8S5 Two component transcriptional regulator, winged helix family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B8S5_RHILS Length = 219 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 38/69 (55%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ FC+NPG+I SR ELL P +R++DV I R+R E P P +I T+ Sbjct: 148 LVVFCQNPGRILSREELLASTHAGLAGPIERSIDVHISRLRHKIEDNPHNPILIKTVRMG 207 Query: 62 GYRFCGDLE 70 GY F +E Sbjct: 208 GYFFAAVVE 216 >UniRef50_A5Z504 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5Z504_9FIRM Length = 221 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + P KI S+ L + + D T++ I IRK ++ + I TI G Sbjct: 157 ILRLLLQYPQKIFSKQNLYESIWNETYAYDDDTINTHISHIRKKIKAI-TNEDYIQTIWG 215 Query: 61 EGYR 64 GY+ Sbjct: 216 IGYK 219 >UniRef50_B5W2T9 Multi-component transcriptional regulator, winged helix family n=2 Tax=Arthrospira RepID=B5W2T9_SPIMA Length = 774 Score = 81.7 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F +P ++ S +++ + E D TV I+ +R + P++I ++G G Sbjct: 159 ELFIRSPYRVFSYDSIIEHLWSIEEPAADNTVRAHIKSLRNKLKDAGGDPKLIENVYGIG 218 Query: 63 YR 64 YR Sbjct: 219 YR 220 >UniRef50_A8W7F8 Putative regulator n=1 Tax=Streptomyces refuineus subsp. thermotolerans RepID=A8W7F8_9ACTO Length = 273 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 10/73 (13%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHD------RTVDVTIRRIRKHFESTPDTPEII 55 + P K+ SRAELL+++ + + RT+D + +RK +P+ I Sbjct: 165 LHLLAAEPDKLFSRAELLRRVWDYDDVSAEVTSLASRTIDTHVSSLRKKLG----SPDWI 220 Query: 56 ATIHGEGYRFCGD 68 T+ G G+RF G+ Sbjct: 221 ITVRGVGFRFNGE 233 >UniRef50_Q1LCD6 Two component transcriptional regulator, winged helix family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LCD6_RALME Length = 225 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + G+I SRA+L + + +L D +DV ++ +R+ P +I T+ G Sbjct: 156 ILILLVTHAGEIVSRAQLAEHIWHADLIAIDNLIDVHMKNLRRKL-DPPGMAALIQTVRG 214 Query: 61 EGYRFCG 67 +G+R Sbjct: 215 QGFRISP 221 >UniRef50_Q1QYP1 Two component transcriptional regulator, winged helix family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYP1_CHRSD Length = 230 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 35/66 (53%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 F +NPG++ +R+ LL+++ G + RTVD I +R+ + + +++ +G Sbjct: 163 ALFLQNPGQLFTRSYLLERIWGVSGALNTRTVDTHISGLRRKLKLDGQHNYRLKSVYQQG 222 Query: 63 YRFCGD 68 YR + Sbjct: 223 YRLEAN 228 >UniRef50_A6DFF3 DNA-binding response regulator n=2 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DFF3_9BACT Length = 230 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C++PG++ SR +L+K+ G ++ +RTVDV I IR+ I T+ G Sbjct: 167 LFFLCKHPGRVYSREAILEKIRGEDVIITERTVDVHILSIRRKVGDFAPN---IITVRGI 223 Query: 62 GYRFCGD 68 GY+ + Sbjct: 224 GYKVAEE 230 >UniRef50_C0YPJ5 DNA-binding response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YPJ5_9FLAO Length = 224 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N K+ R E+L+K+ G ++ +RT+DV IRR+R+ I T+ G Sbjct: 164 LYLLASNTEKVFKREEILEKVWGNDVIVGERTIDVHIRRLREKLGINT-----IQTLKGI 218 Query: 62 GYRFC 66 GY+ Sbjct: 219 GYKLI 223 >UniRef50_Q12PS6 Two component transcriptional regulator, winged helix family n=79 Tax=Proteobacteria RepID=Q12PS6_SHEDO Length = 243 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 +PG++QS++ L + + ++ ++V IRR+RK + ++I T+ G+G Sbjct: 159 EFLMLHPGEVQSKSVLTEHIYDQDFDLDSNVIEVFIRRLRKKLDPDN-QYQLIETLRGQG 217 Query: 63 YRFCG 67 YR Sbjct: 218 YRLNP 222 >UniRef50_UPI0001AF1AC1 two-component system response regulator n=3 Tax=Streptomyces RepID=UPI0001AF1AC1 Length = 290 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + CE+PG + SR +L+ + + +T+DV + +R+ P I T+ G Sbjct: 206 LALLCEDPGAVCSRRRILEHVWDPYYEGATKTLDVHVASLRRKLGR----PGWIQTLRGV 261 Query: 62 GYRFCGD 68 G+R Sbjct: 262 GFRLAVQ 268 >UniRef50_D1VF89 Two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VF89_9ACTO Length = 306 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N + +RA+LL + G + ++ I +R+ P +I T+ G Sbjct: 241 LQFLLANARAVLTRAQLLDHVWGHDFSGEGGVLETYISYLRRKV--DNVEPPLIHTVRGV 298 Query: 62 GYRFCGD 68 GY Sbjct: 299 GYVLRLP 305 >UniRef50_B2XT10 Transcriptional regulatory protein 1 n=3 Tax=Heterosigma akashiwo RepID=B2XT10_HETA2 Length = 231 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK--PHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F KI +R ++K++ G R VDV I ++R E P P+I+ TI Sbjct: 163 LKVFLLEKNKILTRKTIIKRVWGFNYSSHIDIRVVDVYISKLRVKIEDDPTNPQILKTIR 222 Query: 60 GEGYRF 65 G GY+F Sbjct: 223 GIGYKF 228 >UniRef50_C1A710 OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A710_GEMAT Length = 205 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L P K +RA LL+ + G RTVD+ + +R+ E P P I T+ Sbjct: 140 LLALVRQPEKALARATLLRDVWGHAPDIQTRTVDLHVVELRRKLERIPSRPRHIRTVWKT 199 Query: 62 GYRFCG 67 GYRF Sbjct: 200 GYRFDP 205 >UniRef50_C1SI97 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SI97_9BACT Length = 236 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIH 59 +L+F G + SR +++ + G+ R++DV I+ +R+ E P P+I+ T+ Sbjct: 169 ILLYFVGKTGHVLSRDDIVNDIWGKNSIYSWSRSLDVHIKNLRQKIEINPKNPDIVKTVS 228 Query: 60 GEGYR 64 G GY+ Sbjct: 229 GVGYK 233 >UniRef50_C9XJX9 Two-component system response regulator n=108 Tax=Firmicutes RepID=C9XJX9_CLODC Length = 222 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 5/69 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E ++ +R LL + G + R VD I+ IRK I T+ G Sbjct: 159 ILKALIEKYPQVITREGLLDSIWGYDYYGDTRIVDAHIKNIRKKISL-----PYIKTVKG 213 Query: 61 EGYRFCGDL 69 GY D+ Sbjct: 214 IGYTLEKDI 222 >UniRef50_B0RZK9 Two-component response regulator n=2 Tax=Finegoldia magna RepID=B0RZK9_FINM2 Length = 222 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M F NP K+ SR L+ + + RT+D I+ +RK I T+ G Sbjct: 159 IMSLFLNNPTKVFSRENLINSLYNTDFYGSSRTIDSHIKNLRKKLPKD-----FIKTVIG 213 Query: 61 EGYRFCGD 68 GY+ + Sbjct: 214 AGYKLNEE 221 >UniRef50_C3X641 Two component transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X641_OXAFO Length = 231 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ P ++ + +LLK + G + V + +RK E P + T G Sbjct: 162 ILIFMTSQPDRVITHQQLLKAIWGPGHTEDMHYIRVHMANLRKKIEENASMPRHLITEAG 221 Query: 61 EGYRFCG 67 GYRF Sbjct: 222 IGYRFVP 228 >UniRef50_B6BUZ2 Two component transcriptional regulator, winged helix family n=1 Tax=beta proteobacterium KB13 RepID=B6BUZ2_9PROT Length = 233 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + C N ++ SR ++ K+ E + RT+DV ++R+R +S I TI G Sbjct: 164 LYLLCMNKNRVLSREIIVDKIWNNESEIDARTIDVHVKRLRSTLKSHGIENS-IETIRGA 222 Query: 62 GYRFCGDLE 70 GY+ ++ Sbjct: 223 GYKLSDEIN 231 >UniRef50_A4W108 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=28 Tax=Streptococcaceae RepID=A4W108_STRS2 Length = 224 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E G+I S+ ELL+K+ E T++V + R+RK E I T+ G Sbjct: 161 ILSALLERQGQIVSKDELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGF--ERIHTVRG 218 Query: 61 EGY 63 GY Sbjct: 219 VGY 221 >UniRef50_UPI0001C321CD putative two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C321CD Length = 166 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 32/70 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ SR L + G+ + P DR VDV +R++R + I T + Sbjct: 78 LVELMRRPDEVLSRELLYELCWGQPMVPSDRAVDVYVRKLRSKLDRALPGWTFIHTHYRL 137 Query: 62 GYRFCGDLED 71 GYRF + Sbjct: 138 GYRFSPQPAE 147 >UniRef50_Q1D8M8 DNA-binding response regulator PhoP2 n=4 Tax=Myxococcus xanthus RepID=Q1D8M8_MYXXD Length = 238 Score = 81.7 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 29/65 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + R E+L + GR++ RTVD + ++K T + I TI G Sbjct: 170 LAFLLRHQDRALPRGEILDAVWGRDVVVDPRTVDNFVSSLKKKLGWTSTSGFSIHTIRGV 229 Query: 62 GYRFC 66 GYR Sbjct: 230 GYRME 234 >UniRef50_D1B9J7 Two component transcriptional regulator, winged helix family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9J7_THEAS Length = 226 Score = 81.7 bits (202), Expect = 8e-15, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ SR +++ ++ +E VDV I+ +R ++ T+ G Sbjct: 157 ILELLMRYENQVFSRDKIIAQVWQKEYDGTSNVVDVHIKYLRDKLRPFNLD-MMVVTVRG 215 Query: 61 EGYRFCGDLED 71 GY+ + Sbjct: 216 VGYKVANPEGE 226 >UniRef50_C7ND40 Two component transcriptional regulator, winged helix family n=4 Tax=Fusobacteriaceae RepID=C7ND40_LEPBD Length = 226 Score = 81.7 bits (202), Expect = 8e-15, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + SR ++L+++ G + +D +D+ I+ +R P + I T+ G Sbjct: 163 LDFLVLNKGIVLSRDKILEEVWGFDYIGNDNILDLYIKYLRDKI-DRPYERKFIQTVRGI 221 Query: 62 GYRF 65 G+ F Sbjct: 222 GFIF 225 >UniRef50_B2IXN9 Multi-component transcriptional regulator, winged helix family n=4 Tax=Nostocaceae RepID=B2IXN9_NOSP7 Length = 624 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + F N +I SRA ++ ++ E P + T+ I+ +R+ ++ + I T++G Sbjct: 158 LDLFLRNNQRIFSRATIVDQLWSAEKDPPEENTIKSHIKSLRQKLKTAGANYDFIETVYG 217 Query: 61 EGYRFCG 67 GYR Sbjct: 218 MGYRLKA 224 >UniRef50_A6TSQ9 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiaceae RepID=A6TSQ9_ALKMQ Length = 236 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + E+ + SR+ LL+++TG + P R VDV IR IRK D+P+ I TI G Sbjct: 171 ILKKLAESLEHVLSRSLLLEEVTGEKSTPDLRIVDVHIRNIRKKLSDHNDSPKYIETIRG 230 Query: 61 EGYRF 65 GY+ Sbjct: 231 VGYKM 235 >UniRef50_Q3Z753 DNA-binding response regulator n=2 Tax=Dehalococcoides RepID=Q3Z753_DEHE1 Length = 222 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +F NPG + +R+ L + + G E T+D I+++R+ + I T+ G Sbjct: 157 ILEYFITNPGVLITRSMLEEHLWGAESTSVSNTIDSLIKKLRQKLGWDAKSGP-IKTLRG 215 Query: 61 EGYRFC 66 GYR Sbjct: 216 AGYRLD 221 >UniRef50_Q6AQP4 Probable two-component system response regulator (Pho family) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQP4_DESPS Length = 224 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ EN G S+ +L+K+ G P VDV + R+R ++I TI G Sbjct: 159 LLYMAENAGTALSKTSILEKVYGYNFDPQTNVVDVLVCRLRAKI-DKGFGQQLIQTIRGV 217 Query: 62 GYRFCG 67 GY Sbjct: 218 GYVLRS 223 >UniRef50_C8W041 Two component transcriptional regulator, winged helix family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W041_DESAS Length = 384 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L F +P ++ + +L+++ G V+V I +R+ + P +I T+ G Sbjct: 321 LLLFMRHPRQVLPKEIILQQIWGHNFTGDLNIVEVYIGYLRRKLQ----KPSLIHTVRGV 376 Query: 62 GYRFC 66 GY F Sbjct: 377 GYLFE 381 >UniRef50_Q1YN14 Putative transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YN14_MOBAS Length = 251 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E G++ SR LL+ + + DR+VDV + R+RK + P P + T++G Sbjct: 180 LRAFLEAQGRVLSRDFLLELFSASGEEAFDRSVDVRVSRLRKKLDEDPKKPVHVRTVYGA 239 Query: 62 GYRFCGDLE 70 GY F ++ Sbjct: 240 GYVFATRVD 248 >UniRef50_Q01473 Protein rcaC n=1 Tax=Fremyella diplosiphon RepID=RCAC_FREDI Length = 651 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 30/70 (42%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N + S ELL K+ E P + TV +RR+R + + IAT+HG Sbjct: 158 LELLLRNCQHVFSSEELLDKLWSSEDFPSEATVRSHVRRLRHKLVAAGAPHDFIATMHGR 217 Query: 62 GYRFCGDLED 71 GY + Sbjct: 218 GYYLKAPSTE 227 >UniRef50_A4AIS8 Two-component system, regulatory protein n=2 Tax=Actinobacteria (class) RepID=A4AIS8_9ACTN Length = 242 Score = 81.3 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+ +R+ +L ++ G VD + +R+ E + I+T+ G Sbjct: 176 LWMLATHPGEALTRSTILSEVWGTTAHIDANVVDQYVSYLRRKLEP-TQSGVTISTVRGV 234 Query: 62 GYRFCG 67 GY Sbjct: 235 GYALSA 240 >UniRef50_B1HT37 Transcriptional regulatory protein srrA (Staphylococcal respiratory response protein A) n=2 Tax=Bacillaceae RepID=B1HT37_LYSSC Length = 216 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTP-DTPEIIATIHGEG 62 F + K+ SR L+ + G + DRT+D +R +R+ + + + T+ G G Sbjct: 146 LFLDYQNKVFSREHLINTVWGYHVSIEDRTIDSHVRNLREKLRKSGFPADDYLQTVWGIG 205 Query: 63 YRF 65 Y++ Sbjct: 206 YKW 208 >UniRef50_Q1ASD3 Two component transcriptional regulator, winged helix family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD3_RUBXD Length = 241 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG+++SR EL K++ G RT+DV IRRIR E + I T G Sbjct: 164 LAALASDPGELKSREELAKEVWGHAGVGSSRTIDVHIRRIRAALEKKSAY-DYIHTARGL 222 Query: 62 GYRFCGDLE 70 GYRF Sbjct: 223 GYRFEPVPR 231 >UniRef50_Q0EY91 Two comoponent transcriptional regulator, winged helix family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY91_9PROT Length = 227 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 34/68 (50%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G++ S+ EL + G+ P DRT+DV I +RK + +T I T+ Sbjct: 160 ILTVLMQHAGEVVSKYELSQAALGKRHGPFDRTLDVHIGHLRKKISAADNTEARIKTVRS 219 Query: 61 EGYRFCGD 68 G+ F + Sbjct: 220 VGWLFVPE 227 >UniRef50_C7MDU8 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=19 Tax=Actinobacteridae RepID=C7MDU8_BRAFD Length = 279 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L PG + +R +LL + RTVD ++ +R+ S ++ T+HG Sbjct: 180 LLCLANAPGTVLTREQLLADVWDWVDATGTRTVDSHVKALRRKLGSD-----LVRTVHGV 234 Query: 62 GYRFCGDLE 70 GY + Sbjct: 235 GYALEIPED 243 >UniRef50_D1C556 Two component transcriptional regulator, winged helix family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C556_SPHTD Length = 240 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ PG++ +LL ++ G E + + +R +R+ E P P + T G Sbjct: 167 LVALARRPGRVIPHDQLLTEVWGAEYRDEVEYLRTYMRYLRQKLERNPTRPTHLLTEPGV 226 Query: 62 GYRFCGDLED 71 GY + E+ Sbjct: 227 GYVLAAEPEN 236 >UniRef50_UPI0001C1726B Multi-component Transcriptional regulator, Winged helix family n=3 Tax=Nostocaceae RepID=UPI0001C1726B Length = 511 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P KI +R +++ K+ + P D V ++ +R + E+I T+HG Sbjct: 159 LELFLRHPQKIFTRGQIIDKLWSIDDSPTDGAVTNLVKDLRGKLKKAGMQEEVIETVHGL 218 Query: 62 GYRFCGDLE 70 GYR E Sbjct: 219 GYRLTSKRE 227 >UniRef50_Q98AP0 Phosphate regulatory protein n=2 Tax=Mesorhizobium loti RepID=Q98AP0_RHILO Length = 234 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H E PGK+ SR EL+ + RTVDV I R+R+ E+ T +I T+ Sbjct: 166 VLRHLLEAPGKVFSRDELIGGAWPANIHVGVRTVDVHISRLRRALEAA-STGIVIRTVRS 224 Query: 61 EGYRFCG 67 GY Sbjct: 225 AGYSLEK 231 >UniRef50_B1WTP9 Two-component response regulator n=12 Tax=Cyanobacteria RepID=B1WTP9_CYAA5 Length = 248 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELK-PHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ R++L+ + G + +R VDV I +IRK ++I T+ G Sbjct: 180 LYFLATHPNRVWERSDLIAAVWGNHHEIGAERKVDVHIGQIRKKINDI--QGKLIKTVRG 237 Query: 61 EGYRFCGDLED 71 +GY F D Sbjct: 238 KGYLFERSESD 248 >UniRef50_B5HT18 Repressor-response regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HT18_9ACTO Length = 246 Score = 81.3 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 5/66 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L P + SR +L+ + E RTVD + +R I T+ G Sbjct: 157 ILLLLASAPETVISRRDLIAAVWADEWAISTRTVDTHVSALRAKLGEG-----WITTVRG 211 Query: 61 EGYRFC 66 GYR Sbjct: 212 VGYRLE 217 >UniRef50_A9BIE2 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=A9BIE2_PETMO Length = 232 Score = 81.3 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N K+ +R E++ K+ + DR +DV I IR E I TI Sbjct: 158 ILDLLARNSEKVYTREEIIDKIWFGDEFITDRVIDVHISMIRSKIGK-----EWIKTIRN 212 Query: 61 EGYRFCGD 68 GY+F + Sbjct: 213 VGYKFNKN 220 >UniRef50_B1IAB9 VncR, response regulator n=69 Tax=Firmicutes RepID=B1IAB9_STRPI Length = 218 Score = 81.3 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + +N G+ +R++++ + + P DR +DV I+ +RK + I T+ Sbjct: 155 ILDYLVKNEGRALTRSQIIDAVWKATDEVPFDRVIDVYIKELRKKLDLD-----CILTVR 209 Query: 60 GEGYRFC 66 GY+ Sbjct: 210 NVGYKLE 216 >UniRef50_B1I7Y4 Response regulator SaeR n=46 Tax=Firmicutes RepID=B1I7Y4_STRPI Length = 232 Score = 81.3 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHG 60 + NP ++ S+ +L +K+ + T++V I +R+ I T+ G Sbjct: 161 LWILASNPERVFSKTDLYEKIWKEDYVDDTNTLNVHIHALRQELAKYSSDQTPTIKTVWG 220 Query: 61 EGYRFCGD 68 GY+ Sbjct: 221 LGYKIEKP 228 >UniRef50_C3WA46 Two-component response regulator n=6 Tax=Fusobacterium RepID=C3WA46_FUSMR Length = 234 Score = 81.3 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M F N + SR ++++++ G + + D+ VDV I +RK E + I T+ G Sbjct: 161 IMYLFLLNKEIVISREKIIEEIWGYDFEGKDKIVDVYINLLRKKIE--NKNEKYIHTVRG 218 Query: 61 EGYRFCGDLED 71 GY +++ Sbjct: 219 FGYILKKIIKN 229 >UniRef50_D0Z2F0 DNA-binding response regulator n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2F0_LISDA Length = 249 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 32/67 (47%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P SR L K++ G E DRT+D I +RK TP+ I T+ G+ Sbjct: 180 LWLLASSPDAPLSRDFLTKELRGIEYDGIDRTIDNKIVSLRKKLLDDSSTPQRIITVRGK 239 Query: 62 GYRFCGD 68 GY F D Sbjct: 240 GYLFVPD 246 >UniRef50_Q020N6 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q020N6_SOLUE Length = 250 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + G+ +R EL + R P++R++DV I +RK E + +I TI G Sbjct: 183 ILEILVRSAGRTVTRDELTAVLYQRPATPYERSLDVHISHLRKKLERDDRS--VIRTIRG 240 Query: 61 EGYRFCGDLE 70 GY+F Sbjct: 241 VGYQFMAGER 250 >UniRef50_Q0AKG2 Two component transcriptional regulator, winged helix family n=98 Tax=Alphaproteobacteria RepID=Q0AKG2_MARMM Length = 256 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK R ELL ++ G T++ I R+R+ E P ++ T G Sbjct: 191 ILKYLYRAGGKPVPRDELLHEVWGYNPAVTTHTLETHIYRLRQKIEPDPAHARLLVTESG 250 Query: 61 EGYRF 65 GYR Sbjct: 251 -GYRL 254 >UniRef50_A6T3B9 Two components system response regulator n=48 Tax=Proteobacteria RepID=A6T3B9_JANMA Length = 246 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F ++P ++ +R +LL GR+ P DR++D+ I R+R+ + P I T+ E Sbjct: 172 LRVFLDHPQRVLTRDQLLNLTQGRDADPFDRSIDLLISRLRQRLQDDAREPRYIKTLRSE 231 Query: 62 GYRFCGDLED 71 GY F + + Sbjct: 232 GYVFSAAVGN 241 >UniRef50_C8WG99 Two component transcriptional regulator, winged helix family n=29 Tax=Bacteria RepID=C8WG99_EGGLE Length = 220 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +PG+ SR ++++ + G + + T+ V + R ++ P I T+ G Sbjct: 156 VCEFLARHPGQAFSRDQIVENVLGWDAESAASTISVHVANARAKLKAAGAEP--IDTVWG 213 Query: 61 EGYRFCG 67 GY++ Sbjct: 214 VGYKWTA 220 >UniRef50_C7S7A3 LRA-16 n=2 Tax=Bacteria RepID=C7S7A3_9BACT Length = 231 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFE-STPDTPEIIATIHG 60 + NPG++ SR++LL +E DR +D I+ +RK + P E+I ++G Sbjct: 162 LKLLVSNPGRVYSRSQLLDLCYQQEQLIIDRVIDSHIKNLRKKISTALPPGQEVIHAVYG 221 Query: 61 EGYRFC 66 GYRF Sbjct: 222 IGYRFE 227 >UniRef50_Q8DHN5 Two-component response regulator n=2 Tax=Chroococcales RepID=Q8DHN5_THEEB Length = 229 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +I SR+ ++ + P + TV V +R +R ++ +I T++G Sbjct: 157 ILEVLLRHGSRILSRSAIMDYAWPLDEMPGEETVKVHLRSLRHKLKAVGAPANLIETVYG 216 Query: 61 EGYRFCGD 68 GYR + Sbjct: 217 FGYRLNPN 224 >UniRef50_C6WIA6 Two component transcriptional regulator, winged helix family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WIA6_ACTMD Length = 244 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 34/69 (49%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN ++++R +L ++ G E D VDV + +R+ + + IAT+ G Sbjct: 176 LAAITENTRQVRTRDQLRRRAWGEEWLADDHAVDVHVSNLRRKLVAAGAPRDFIATVRGV 235 Query: 62 GYRFCGDLE 70 GYR ++ Sbjct: 236 GYRVNQEVR 244 >UniRef50_Q9F5J0 Sim1 n=2 Tax=Streptomyces antibioticus RepID=Q9F5J0_STRAT Length = 251 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 4/65 (6%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PG++ +R +++ ++ G + RT+ V + IRK PE++ T+ G Sbjct: 180 LALLATDPGRVFTREQIMFEVWGHDGAGDTRTLGVHVTGIRKKLR----MPELVETVRGV 235 Query: 62 GYRFC 66 G+R Sbjct: 236 GFRLA 240 >UniRef50_Q5WC24 Two-component response regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WC24_BACSK Length = 224 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 26/66 (39%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 M NP +I S+ L + + G E TV IR IR +I T+ G Sbjct: 159 IMEMLMSNPRQIFSKDHLYETIWGVEATGQSHTVTEHIRNIRIRIHKIDPMANLIHTVWG 218 Query: 61 EGYRFC 66 GY+ Sbjct: 219 VGYKLE 224 >UniRef50_A8ZMT3 Transcriptional regulatory protein, C terminal domain n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMT3_ACAM1 Length = 68 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 3 LHFCENPGKIQSRAELLKKMTGR--ELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +PG +R+E L K+ G E + +DV I +R+ + + P++I T+HG Sbjct: 2 ELLATHPGVPIARSEFLDKVWGYSRETNIDTQVIDVHISHLRRKLGDSCERPKLIHTVHG 61 Query: 61 EGYRF 65 GY Sbjct: 62 VGYAL 66 >UniRef50_D1AQD9 Two component transcriptional regulator, winged helix family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQD9_SEBTE Length = 226 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +F +N ++ +R + +K+ + VDV I +R +II T+ G Sbjct: 162 LEYFLKNKNRVLTRTMISEKIWDIDFITESNIVDVYINFLRSKI-DKGYDKKIIKTVRGV 220 Query: 62 GY 63 GY Sbjct: 221 GY 222 >UniRef50_Q7ULL1 Two-component system response regulator n=1 Tax=Rhodopirellula baltica RepID=Q7ULL1_RHOBA Length = 239 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + G + R L ++ G P+ RTVD T+ ++RK E P P II T++G Sbjct: 169 ILILLHDADGDVVHRQTLFQECWGHNRVPNSRTVDQTVSQLRKRIERDPKHPRIIQTVYG 228 Query: 61 EGYRFC 66 GYR+ Sbjct: 229 LGYRYE 234 >UniRef50_C1FSZ1 Regulatory protein VanR n=16 Tax=Firmicutes RepID=C1FSZ1_CLOBJ Length = 228 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTG-RELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NP + +R LL+K+ E + T+ I RIR E+ + + I T++G Sbjct: 160 LKILVKNPKIVLTRQMLLEKIWDVDENFVDEHTLTTVISRIRNKIEA--EETQYIKTVYG 217 Query: 61 EGYRFCGDLE 70 GY + GD Sbjct: 218 MGYMWIGDDR 227 >UniRef50_B7GFY6 DNA-binding response regulator, OmpR family (REC-wHTH domains) n=16 Tax=Firmicutes RepID=B7GFY6_ANOFW Length = 226 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +N G++ +R +L ++ G + +T+D T++ +RK + ++I T+ G Sbjct: 163 LDLLLQNRGRVLTRDIILDRIWGYDADVSMKTIDATVKLLRKKIGD--EQQQLIKTVRGV 220 Query: 62 GY 63 GY Sbjct: 221 GY 222 >UniRef50_A8L7H2 Putative two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EAN1pec RepID=A8L7H2_FRASN Length = 124 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRE----LKPHDRTVDVTIRRIRKHFESTPDTPEIIA 56 + + NPG++ SR ELL+++ ++ RTVDV I R+R+ + I Sbjct: 42 VLDYLVRNPGRVHSREELLREVWRQDPGALGASAPRTVDVMITRLRRKLGRH--HRDHIE 99 Query: 57 TIHGEGYRFCGDLED 71 T+ GYR+ ++ Sbjct: 100 TVRRVGYRYRPAGDE 114 >UniRef50_C0Z911 Two-component response regulator n=4 Tax=Firmicutes RepID=C0Z911_BREBN Length = 255 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L + + +R +L++++ G + + DR VD+ I+RIR+ E+ P + I T G G Sbjct: 189 LFLAQYKNQTFTREQLIEQVWGMDYEGSDRAVDLAIKRIRRSLENWPTSEGEIRTYRGLG 248 Query: 63 YRF 65 Y+ Sbjct: 249 YKL 251 >UniRef50_B7IXR9 DNA-binding response regulator n=167 Tax=Bacilli RepID=B7IXR9_BACC2 Length = 225 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPE-IIATIHG 60 + F + + SR +L++++ G DRTVD IR +R + + T++G Sbjct: 156 LGLFLRHVNYVLSRDQLIERIWGLNTNTEDRTVDSHIRNLRDKLRKANFPIDHHLKTVYG 215 Query: 61 EGYRFC 66 GYR+ Sbjct: 216 VGYRWI 221 >UniRef50_UPI0001C35523 two component transcriptional regulator, winged helix family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35523 Length = 303 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 33/68 (48%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 L NPG+I S +EL +++ + TV V + R+R E I T+ GEG Sbjct: 231 LFLLGNPGRILSASELYQEVWRTGKPDNANTVAVHMTRLRHKLEEAEPVIGRIETVRGEG 290 Query: 63 YRFCGDLE 70 YRF +E Sbjct: 291 YRFLPKVE 298 >UniRef50_Q0VLF7 DNA-binding heavy metal response regulator, putative n=2 Tax=Alcanivorax RepID=Q0VLF7_ALCBS Length = 239 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 36/67 (53%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 + +N GK+ SRA LL+K+ G RTVDV I RIR+ + P+ I T++ GY Sbjct: 173 YLFQNVGKLMSRAHLLEKVWGIMTPIESRTVDVHISRIRRSLQIRPERGYRIKTVYQHGY 232 Query: 64 RFCGDLE 70 R E Sbjct: 233 RLEPIEE 239 >UniRef50_C3JSB6 Two component transcriptional regulator, winged helix family n=2 Tax=Rhodococcus erythropolis RepID=C3JSB6_RHOER Length = 249 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ + G + S++E+ + G TV V ++R+R+ S + I TI G Sbjct: 182 LVYLIKRRGHVASQSEISLAVWG--HSAETNTVAVHVKRLREKLGSDTQHGQFIRTIRGA 239 Query: 62 GYRFCG 67 GYR Sbjct: 240 GYRLAP 245 >UniRef50_A9F790 Two component system transcriptional regulatory protein n=34 Tax=Proteobacteria RepID=A9F790_SORC5 Length = 234 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 29/67 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + GK+ + +LL ++ G + V + ++R E P P I+ T G Sbjct: 168 LTTLIRHAGKVLTHRQLLGEVWGPAYAGQAHYLRVYMAQLRHKLERDPARPLILITEPGV 227 Query: 62 GYRFCGD 68 GYR G Sbjct: 228 GYRLKGP 234 >UniRef50_Q01ZD3 Two component transcriptional regulator, winged helix family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZD3_SOLUE Length = 221 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + SRAELL + RT+DV + +R+ E P P I T+ G Sbjct: 157 LRYLIAWRGSVLSRAELLDAVWQYRA-TTTRTLDVHVSLLRQKLEDAPHRPRHILTLRGR 215 Query: 62 GYRF 65 GY F Sbjct: 216 GYFF 219 >UniRef50_Q3JG93 Response regulator protein n=61 Tax=Proteobacteria RepID=Q3JG93_BURP1 Length = 288 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 34/66 (51%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L G + SR ++LK++ G E DR+VD I ++R+ FE P I TI G Sbjct: 218 LLILARAAGTVLSRDDILKQLRGIEFDGIDRSVDSGISKLRRRFEDASSEPHKIKTIWGR 277 Query: 62 GYRFCG 67 GY F Sbjct: 278 GYLFSP 283 >UniRef50_C1ACD7 OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ACD7_GEMAT Length = 240 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ S +L + RE V V I +R+ E P +I T G Sbjct: 173 LRALVLHAGRPMSPRQLWDIVWDREFGDFATHVRVHITHLRRKIEPDASMPRLIITEPGV 232 Query: 62 GYRFCGD 68 GYRF Sbjct: 233 GYRFNAP 239 >UniRef50_D2R142 Two component transcriptional regulator, winged helix family n=2 Tax=Planctomycetaceae RepID=D2R142_9PLAN Length = 237 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPH-DRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+ SR ELL + RT+D+ I R+R+ P P ++ T+ G+ Sbjct: 165 RYLASHAGRAISRDELLVNVWRISPDGLPTRTIDMQIARLREKLRDDPTQPRVLLTVRGK 224 Query: 62 GYRFC 66 GY F Sbjct: 225 GYMFA 229 >UniRef50_A8L9L0 Two component transcriptional regulator, winged helix family n=11 Tax=Actinomycetales RepID=A8L9L0_FRASN Length = 236 Score = 80.9 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + NPGK+ S L+ ++ G ++ + I R+R+ E P P + T G Sbjct: 171 LEALVRNPGKLVSSRALVSQVWGPAYAADTSSLRLYINRLRRKLEPDPTRPRHLTTEPGM 230 Query: 62 GYRFCG 67 GYR+ Sbjct: 231 GYRYQP 236 >UniRef50_Q1IUD6 Two component transcriptional regulator, winged helix family n=5 Tax=Bacteria RepID=Q1IUD6_ACIBL Length = 232 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L+ +PGK+ LL + G + + V + ++RK E I T Sbjct: 160 LLYLARHPGKVVPHRTLLSSVWGADHAEQSEYLRVFVGQLRKKIEGENSNKRYILTERWI 219 Query: 62 GYRFCGDLE 70 GYRF + E Sbjct: 220 GYRFIPEGE 228 >UniRef50_P15795 Cholera toxin transcriptional activator n=121 Tax=Gammaproteobacteria RepID=TOXR_VIBCH Length = 294 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + P ++ SR +L + + + D ++ I +RK + + +P+ + T+ Sbjct: 54 ILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSSLTQAISTLRKMLKDSTKSPQYVKTVP 113 Query: 60 GEGYRFCGDLE 70 GY+ +E Sbjct: 114 KRGYQLIARVE 124 >UniRef50_C4L2J9 Two component transcriptional regulator, winged helix family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L2J9_EXISA Length = 221 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEI-IATIHG 60 + PG++ R EL++ + G + + +RTVDV I+R+R F D P + I T+ G Sbjct: 157 LFQLASFPGRVYRREELIELVWGFDFEGDERTVDVHIKRLRNRF----DHPALTIRTVRG 212 Query: 61 EGYRFC 66 GY Sbjct: 213 VGYALE 218 >UniRef50_C1F3P9 Transcriptional regulator, putative n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3P9_ACIC5 Length = 588 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + E+PG++ S E+L + E + + + +RK P+ I T+ Sbjct: 32 VLEYLVEHPGRLISHDEILDALW-PETFVQPQILRTYMLDLRKVLGDDAAEPKYIETLPK 90 Query: 61 EGYRFCGDL 69 GY+F + Sbjct: 91 RGYQFVAAV 99 >UniRef50_C1I8T8 Two-component system response regulator n=2 Tax=Clostridium RepID=C1I8T8_9CLOT Length = 226 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +N KI SR E+++ + + D T+ V I R+RK E + + T G Sbjct: 160 ILYVLIKNKEKIVSRNEIIESLWQSDEFVDDNTLTVNINRLRKKLEEIGA-IDYLKTKRG 218 Query: 61 EGYRFCGD 68 +GY D Sbjct: 219 QGYILICD 226 >UniRef50_B0MTN6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTN6_9BACT Length = 217 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ SR E+ ++ G + DRT+DV +R+IR+ I+T+ G Sbjct: 157 LALLASSPGKLFSREEIYSRIWGDSVVVGDRTIDVHVRKIRQKIGDG-----HISTVKGM 211 Query: 62 GYRFC 66 GY++ Sbjct: 212 GYKYE 216 >UniRef50_D1SG74 Putative two component transcriptional regulator, winged helix family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SG74_9ACTO Length = 197 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E+P ++ +R +LL + G E RTVDV +RR+R F ++ T++G Sbjct: 126 LLFLAEHPRRVFTRLQLLANVWGYEHAVA-RTVDVHVRRLRAKFGP---ETPLVTTVYGV 181 Query: 62 GYRFCGD 68 GYR D Sbjct: 182 GYRLADD 188 >UniRef50_C9YZ98 Putative two component response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YZ98_STRSW Length = 246 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + N G + A + ++ G + P + + V + +R+ P P +I T+ G Sbjct: 181 LELLVRNAGIVLDHATIYDRIWGYDFGPGSKNLAVYVGYLRRKL-DEPGAPALIHTVRGV 239 Query: 62 GYRFCGD 68 GY D Sbjct: 240 GYALRED 246 >UniRef50_B3E0R0 DNA-binding response regulator KdpE (REC-wHTH domains) n=8 Tax=Bacteria RepID=B3E0R0_METI4 Length = 240 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK+ + ++L+++ G + V + R+R+ E P+++ T G Sbjct: 165 ILRLLVRHAGKVLTHRQILQEVWGPRGVDQVHYLRVYMARLREKIEENSLQPKLLLTEPG 224 Query: 61 EGYRF 65 GYR Sbjct: 225 IGYRL 229 >UniRef50_Q47QJ3 Response regulator receiver n=1 Tax=Thermobifida fusca YX RepID=Q47QJ3_THEFY Length = 218 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E PG + SRAE++ K+ G + RT+ V + +R+ P +I T+ G Sbjct: 152 LRVLIERPGHVVSRAEIMHKVWGYTPESDTRTLGVHMVSLRRKLAL----PSLIETVRGV 207 Query: 62 GYRFCGD 68 GYR + Sbjct: 208 GYRITSE 214 >UniRef50_A4AF30 Two component transcriptional regulator, winged helix family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AF30_9ACTN Length = 241 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 3/73 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G+I S EL+ + V IR +R+ + P++I T G Sbjct: 165 VLEYLMRNAGRIVSSTELIDHAWDSNYEGFSNVVQTYIRYLRQKL-TAGGEPDVIETRRG 223 Query: 61 EGYRFC--GDLED 71 GY +E+ Sbjct: 224 SGYVIEQSEPVEE 236 >UniRef50_A4X6U8 Transcriptional regulator domain protein n=4 Tax=Micromonosporaceae RepID=A4X6U8_SALTO Length = 203 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LH +P ++ +R +LL + G E RTVDV +RR+R ++ T++G Sbjct: 132 LLHLVAHPRRVFTRLQLLNAVWGYEHAGV-RTVDVHVRRLRGKVGVDVP---LVTTVYGV 187 Query: 62 GYRFCGDLE 70 GYR D Sbjct: 188 GYRLADDAR 196 >UniRef50_A8HY28 Response regulator receiver n=2 Tax=Alphaproteobacteria RepID=A8HY28_AZOC5 Length = 228 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ +PG++ + ++L + G + + V + ++R+ E P TP +I T G Sbjct: 163 LVYLARHPGRVLTHRQILGAVWGPAHLDDTQYLRVYVGQLRQRLEVEPATPTLILTEPGI 222 Query: 62 GYRFCG 67 GYR Sbjct: 223 GYRMAE 228 >UniRef50_Q47PT2 Similar to Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Thermobifida fusca YX RepID=Q47PT2_THEFY Length = 206 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + H PG++ +R ELL ++ E R+VDV + RIR+ + E + T+ Sbjct: 143 LAHLASAPGRVFTRQELLDQVWDPEAHTTARSVDVHVHRIRRKLGALG---ERLVTVRRV 199 Query: 62 GYRFCG 67 GY + Sbjct: 200 GYVYRP 205 >UniRef50_Q6MHZ0 Two component response regulator n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHZ0_BDEBA Length = 224 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP KI + +LK++ + P VDV + R+R E T +I T+ G Sbjct: 159 LDLFMSNPNKIIGKQTILKEVWNYDFDPQTNVVDVLVCRLRNKLEKDFPT-RLIYTVRGV 217 Query: 62 GYRFCG 67 GY Sbjct: 218 GYVLKS 223 >UniRef50_C9B9W7 Transcriptional regulator n=12 Tax=cellular organisms RepID=C9B9W7_ENTFC Length = 226 Score = 80.5 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P K+ SRA L + + ++TV++ I +R I T+ G Sbjct: 164 LKLFLEHPKKVFSRANLYETVWQEPYFDSEKTVNMHISNLRGKLAKA--HAVYIHTVWGV 221 Query: 62 GYRFC 66 G+RF Sbjct: 222 GFRFD 226 >UniRef50_B0S387 Two-component response regulator n=6 Tax=Clostridiales Family XI. Incertae Sedis RepID=B0S387_FINM2 Length = 231 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +N I S +L+ + + ++ T+ I RIR+ E P P+I+ TI G Sbjct: 164 ILSYLADNMNMIVSIDRILENIW-EDSYGYENTLITHIYRIREKLEDNPRDPKILITIKG 222 Query: 61 EGYRFCGDL 69 GY+ + Sbjct: 223 LGYKLVKED 231 >UniRef50_C7H9H0 Subtilin biosynthesis regulatory protein SpaR n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9H0_9FIRM Length = 226 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFEST--PDTPEIIATI 58 + + G+ ++ ++ + + G + D V I+ IR + P+ +++ T+ Sbjct: 156 ICEYLALHAGQTFTKEQIYEAVFGIDGTADDTAVTQHIKNIRSKLRAAGVPEPEKLLNTV 215 Query: 59 HGEGYRFCGDL 69 G GYR+ + Sbjct: 216 WGVGYRWKSED 226 >UniRef50_Q5LZ35 Response regulator (Homolog to RR01Spn & Sth) n=122 Tax=Bacteria RepID=Q5LZ35_STRT1 Length = 226 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ G I SR +L+K++ + D T+ V + R+RK E+ + I T G Sbjct: 159 ILQVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLK-DFIETKKG 217 Query: 61 EGYRFCGD 68 GY D Sbjct: 218 VGYGLRHD 225 >UniRef50_A5CFS8 Transcriptional regulator n=1 Tax=uncultured marine microorganism RepID=A5CFS8_9ZZZZ Length = 191 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ + G + +R +L+ + + V I +R P I T+ Sbjct: 42 VLMVLASHQGSVVTREQLVDAVWDGRFVADEAIVAK-IATLRHKLGDHAKNPTYIETVPR 100 Query: 61 EGYRF 65 GYR Sbjct: 101 RGYRL 105 >UniRef50_Q7NGT9 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NGT9_GLOVI Length = 234 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + E+ ++ SR +L + G V+V IR +R E + ++I T+ Sbjct: 170 LHYLIEHAREVLSRERILLNVWGESFDGESNIVEVYIRYLRLKIEREGEK-KLIHTVRSV 228 Query: 62 GYRFC 66 GY Sbjct: 229 GYSLR 233 >UniRef50_B4WPA6 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WPA6_9SYNE Length = 685 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F NP ++ SR+ +++ + + P + +V ++ +R+ + I ++G Sbjct: 158 LELFLRNPSRVFSRSHIIEHLWTFDDPPLEDSVKAHVKGLRRRLKQAGADG-WIENVYGM 216 Query: 62 GYRFCGDLE 70 GY+ ++ Sbjct: 217 GYKLSPKID 225 >UniRef50_B0P857 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P857_9FIRM Length = 140 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 29/67 (43%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +PG + S +++ + + R+ + V I +IR+ I T+ G Sbjct: 72 VLTYLARHPGWVFSASQIYEAVWDRDGEHCGTAVASVIGQIRRKLTPDTPKGGYIRTVPG 131 Query: 61 EGYRFCG 67 GY+F Sbjct: 132 SGYKFES 138 >UniRef50_A7BNW6 Two component response regulator n=1 Tax=Beggiatoa sp. SS RepID=A7BNW6_9GAMM Length = 151 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ +R +LL+ GRE P DR++DV + R+R+H P II T Sbjct: 80 LRVFLAHPKRVLTRDQLLELSQGREALPFDRSIDVLVGRLRRHLGENAKNPNIIKTERSA 139 Query: 62 GYRFCGDLE 70 GY D++ Sbjct: 140 GYILATDVQ 148 >UniRef50_C6LHZ3 Regulatory protein VanR n=2 Tax=Clostridiales RepID=C6LHZ3_9FIRM Length = 224 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN G R+ L+ + G + + V ++R+R E P I TI+G Sbjct: 158 LRILVENRGAAIRRSYLIDTVWQGDTEYVDEHALTVAVKRLRDKLEDDSANPAYIKTIYG 217 Query: 61 EGYRFC 66 GY + Sbjct: 218 IGYMWA 223 >UniRef50_B2V1F5 Two component response regulator n=6 Tax=Bacteria RepID=B2V1F5_CLOBA Length = 232 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGREL-KPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN + +R +L+K+ E + V I+R+R+ E TP +I T+ G Sbjct: 162 LQFLMENSPNVLTRNTILEKLWDIEGNYIDANALSVYIKRLREKVEYDSRTPTLIETVRG 221 Query: 61 EGYRFCGDL 69 GY++ + Sbjct: 222 VGYKWTPKV 230 >UniRef50_C7Q2J4 Two component transcriptional regulator, winged helix family n=5 Tax=Actinomycetales RepID=C7Q2J4_CATAD Length = 254 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P + +R ++L+ + G + +P ++DV + +RK E P ++ T+ G Sbjct: 184 LEMFLSHPRQALTREQILRAVWGFDFEPASNSLDVYVMYVRKKTEFDDL-PRLVQTVRGV 242 Query: 62 GYRFCG 67 GY Sbjct: 243 GYALRT 248 >UniRef50_D2LS32 Two component transcriptional regulator, winged helix family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LS32_BACS4 Length = 251 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + N GK+ +R EL+K+++G + +R +DV I RIR E + P + T+ Sbjct: 170 LYYLFLNKGKVLTRMELMKELSGESDELDERIIDVFISRIRTKIEPSRKNPIYLKTVRNL 229 Query: 62 GYRF 65 GY Sbjct: 230 GYMM 233 >UniRef50_C8NDP1 DNA-binding response regulator n=2 Tax=Firmicutes RepID=C8NDP1_9LACT Length = 220 Score = 80.5 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Query: 1 AMLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + ++ G+ SR+++L + E P DR VDV I+++RK + I TI Sbjct: 157 ILKLLVKHEGQALSRSQILDHVWSNHEDPPFDRVVDVYIKQLRKKLKLD-----CIVTIK 211 Query: 60 GEGYRFC 66 GY+ Sbjct: 212 NVGYKLE 218 >UniRef50_B2TMQ5 Regulatory protein VanR n=5 Tax=Clostridium RepID=B2TMQ5_CLOBB Length = 229 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRE-LKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G++ +R LL+K+ + + T+ V I R+R E + + I TI+G Sbjct: 159 LKILISNKGQVLTRQVLLEKLWDCDRNFVDEHTLTVNINRLRNKIE--TENVKYIKTIYG 216 Query: 61 EGYRFCG 67 GY + G Sbjct: 217 MGYMWVG 223 >UniRef50_C8WKQ8 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=C8WKQ8_EGGLE Length = 237 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 N G++ S+ L+ K+ G E D V+ + +RK + T I T+ G Sbjct: 159 KVLMANAGQVVSKDMLIAKVWGVESSAEDNNVEAYVSFLRKKMKFLGSTAR-IETLRRAG 217 Query: 63 YRFCGD 68 YRF D Sbjct: 218 YRFVAD 223 >UniRef50_A5GMH0 Two-component sytem response regulator n=10 Tax=Chroococcales RepID=A5GMH0_SYNPW Length = 231 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E G + R +L+++ E ++V +R +R+ E +I TI G Sbjct: 159 LMLLMEERGTVVGRDRILREVWNDEQGASSNVIEVYVRYLRQKLEE-GGDSRLIHTIRGR 217 Query: 62 GYRFC 66 GY Sbjct: 218 GYCLN 222 >UniRef50_B2D6Y9 ToxR n=2 Tax=Vibrio cholerae RepID=B2D6Y9_VIBCH Length = 186 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + P ++ SR +L + + + D ++ I +RK + + +P+ + T+ Sbjct: 42 ILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSSLTQAISTLRKMLKDSTKSPQYVKTVP 101 Query: 60 GEGYRFCGDLE 70 GY+ +E Sbjct: 102 KRGYQLIARVE 112 >UniRef50_A9KX94 Two component transcriptional regulator, winged helix family n=7 Tax=Gammaproteobacteria RepID=A9KX94_SHEB9 Length = 235 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ +N G I SR ++++++ G +R VD I ++RK P I TI + Sbjct: 167 LITLAKNAGNILSRNDIVEQVKGYYYDGIERGVDNHICQLRKKLGDDARNPFKIKTIRSK 226 Query: 62 GYRFCG 67 GY F Sbjct: 227 GYLFVS 232 >UniRef50_A9FLR1 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FLR1_SORC5 Length = 235 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ E ++Q+R LL + G ++ RTVD ++R+R + I T+ G Sbjct: 163 LVALYEARERVQTRTALLDGVWGIDVSITTRTVDTHVKRLRDKLRRAG---DYIQTVRGI 219 Query: 62 GYRFCGDLE 70 GYRF + Sbjct: 220 GYRFAASPD 228 >UniRef50_A5MZN8 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5MZN8_CLOK5 Length = 224 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +P ++ S+A+L + + + +D ++ V + IRK + E I TI G Sbjct: 160 ILKIMLRHPKQVFSKAKLYELLWNDIYQGNDNSISVHVSNIRKKISAITSE-EYIKTIWG 218 Query: 61 EGYRFC 66 G+ Sbjct: 219 IGFSLV 224 >UniRef50_Q0I8A9 DNA-binding response regulator n=13 Tax=Cyanobacteria RepID=Q0I8A9_SYNS3 Length = 250 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + GK+ R+E++K + G + D +DV IR +R+ E D P +I T+ G Sbjct: 179 LCFLMRGNGKVLERSEIMKGVWGEDFYGDDNLLDVYIRYLRQKVE-NKDLPSLIHTVRGV 237 Query: 62 GYRFCGD 68 G+ + Sbjct: 238 GFILRDE 244 >UniRef50_B6QXV6 Two component transcriptional regulator, winged helix family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QXV6_9RHOB Length = 230 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKP-HDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F ++PG + SR ++L R+ DR+VD I+R+R+ E P P I T Sbjct: 163 VLRFFAQSPGVVFSREDILAVARTRQHAGKDDRSVDTLIKRLRRKIEVEPSNPMHILTEW 222 Query: 60 GEGYRF 65 G+GY F Sbjct: 223 GKGYTF 228 >UniRef50_A8EX60 Two-component response regulator n=2 Tax=Epsilonproteobacteria RepID=A8EX60_ARCB4 Length = 221 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 L EN KI SR ++L + ++ +RT+D+ I IR P+ I ++ G Sbjct: 156 IFLFLIENQNKISSREQILNA-SSLDINTKNRTIDMHISNIRFKIGDDSKNPKYIKSVWG 214 Query: 61 EGYRFCG 67 GY+F G Sbjct: 215 IGYKFVG 221 >UniRef50_D2PKG5 Two component transcriptional regulator, winged helix family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PKG5_9ACTO Length = 226 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + PG + S ELL+ + P ++V VT+ +R+ + P ++ T+ G Sbjct: 159 VLRYLMSRPGHVVSAEELLEHVWDENADPFTQSVRVTVGTLRRKLTQEGEEP-LLETVIG 217 Query: 61 EGYRFCG 67 GYR G Sbjct: 218 RGYRLRG 224 >UniRef50_C6LFN3 DNA-binding response regulator ResD n=21 Tax=Bacteria RepID=C6LFN3_9FIRM Length = 251 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P KI +R +L+ ++ G + +RTV+ I R+R F D I T+ G Sbjct: 185 LYKLLSYPNKIFTRQQLMDEIWGMFSETDERTVNTHINRLRDKFSDCSDFE--IVTVRGL 242 Query: 62 GYRFCGDLE 70 GY+ ++E Sbjct: 243 GYKAVKNVE 251 >UniRef50_C9ZA01 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZA01_STRSW Length = 248 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ P ++ + E+L ++ + R VD +R +R+ P++I T+ G Sbjct: 175 LVCLLAQPERVVGKKEILSEVWHYDFAGDARIVDTYVRNLRRKI--DRFEPQLIQTVRGV 232 Query: 62 GYRF 65 GY Sbjct: 233 GYCL 236 >UniRef50_Q81I47 Two-component response regulator n=76 Tax=Firmicutes RepID=Q81I47_BACCR Length = 232 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N GKI R ++ ++ G + V+V + +RK E + I T+ G Sbjct: 167 LEYLVQNSGKILMREQIFDRVWGFDSDTTVAIVEVYVHHLRKKLEPFGYQKD-IQTVRGI 225 Query: 62 GYRFCGD 68 GY Sbjct: 226 GYILKEQ 232 >UniRef50_C9PHD6 Transcriptional activator ToxR n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PHD6_VIBFU Length = 203 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + +P + SR ++ +++ R K D ++ +I +RK PE I T Sbjct: 40 ILTLLTSHPNAVLSREDIYQQVWVERGNKVDDSSLTQSISLLRKVLGDKATNPEYIKTEA 99 Query: 60 GEGYRFCGDLE 70 GYRF ++ Sbjct: 100 RIGYRFIAPVD 110 >UniRef50_Q2JIE3 DNA-binding response regulator n=12 Tax=Cyanobacteria RepID=Q2JIE3_SYNJB Length = 269 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ + G SR ELL++ + + RTVD I +RK E P P +I T+ Sbjct: 161 LMVLVQADGDPVSRLELLERAW-PDSTDNPRTVDTHILSLRKKLERDPRQPSLIHTVRNV 219 Query: 62 GYRF 65 GY F Sbjct: 220 GYCF 223 >UniRef50_B8HC02 Two component transcriptional regulator, winged helix family n=12 Tax=Actinomycetales RepID=B8HC02_ARTCA Length = 224 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + +R ++L + G R++DV + +R + P I + G Sbjct: 160 LALLARHAGSVVTREQILDALWGDAFLASSRSLDVHLTGLRAKLQ----MPGFIINVRGV 215 Query: 62 GYRFCGD 68 GYR D Sbjct: 216 GYRVEAD 222 >UniRef50_B4CUK8 Two component transcriptional regulator, winged helix family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUK8_9BACT Length = 241 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E P +Q+R +LL ++ G E +R+VD +RR+R + I T++G Sbjct: 179 LATLAERPNVVQTRDKLLTEVWGNENAIENRSVDTYLRRLRNKLGEAG---QHIKTVYGF 235 Query: 62 GYR 64 GYR Sbjct: 236 GYR 238 >UniRef50_UPI000050FFEF putative two component transcriptional regulator, winged helix family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FFEF Length = 275 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + R EL+ + P +RTVDV IRR+R+ +I T+ G Sbjct: 200 LATLVSHADSTLPREELITAVWSGGEVPDERTVDVHIRRLRRRLGEYSS---VIRTMRGS 256 Query: 62 GYRFCGDLE 70 GYR+ + Sbjct: 257 GYRYDTHPD 265 >UniRef50_A4YSP3 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YSP3_BRASO Length = 1015 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++H E G++ ++ ELL + ++ + ++ VTI +R + +P I T+ Sbjct: 36 VLVHLVERAGELVTKEELLNAVWS-DVHVSESSLSVTINALRTALDDNKQSPRYIETVPR 94 Query: 61 EGYRFCGDLE 70 GYRF +E Sbjct: 95 RGYRFIAAVE 104 >UniRef50_C0YVQ4 Response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YVQ4_9FLAO Length = 224 Score = 80.1 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 4 HFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGY 63 EN K+ SR ++L + G + VDV I IR +II T+ G GY Sbjct: 163 FLMENKNKVLSRTQILHNVWGIDFDNTTNVVDVYISYIRNKI--DETEQKIIHTVKGTGY 220 >UniRef50_D1CB22 Two component transcriptional regulator, winged helix family n=2 Tax=Bacteria RepID=D1CB22_THET1 Length = 238 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 + + G++ +L++ + G + D V I +R+ E P P+ I T+ G G Sbjct: 174 RYMVMHQGEVLPTEDLMRNVWGYSVAADDSLVKTHIYYLRQRIEEDPAHPKHILTVPGVG 233 Query: 63 YRFCG 67 Y F Sbjct: 234 YLFQP 238 >UniRef50_C0Z5X8 Two-component response regulator n=143 Tax=Firmicutes RepID=C0Z5X8_BREBN Length = 251 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ F +N ++ R LL + G E VDV +R +R P+ I+T+ G Sbjct: 187 LVTFMKNINRVLPRDVLLDTVWGFEAAVETNVVDVYVRYLRNKI-DFPNEDSYISTVRGI 245 Query: 62 GYRFCG 67 GY Sbjct: 246 GYVMRK 251 >UniRef50_Q0K8J0 Response regulator, OmpR-family n=10 Tax=Proteobacteria RepID=Q0K8J0_RALEH Length = 231 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + GK+ + ELL+++ G + + V + +R E+ P P + T G Sbjct: 166 LAVLLAHRGKVMTHRELLREVWGPSHADSSQYLRVYMGHLRHKLEADPARPAYLLTEIGV 225 Query: 62 GYRFCG 67 GYRF G Sbjct: 226 GYRFAG 231 >UniRef50_C9NBD5 Two component transcriptional regulator, winged helix family n=6 Tax=Streptomyces RepID=C9NBD5_9ACTO Length = 230 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 4/67 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + PG + R +++ ++ + RT++V + +R P ++ T+ G Sbjct: 166 LALLAQRPGVVFRREQIISEVWRTSWEGTGRTLEVHVASLRSKLRL----PALVETVRGV 221 Query: 62 GYRFCGD 68 GYR Sbjct: 222 GYRLVPP 228 >UniRef50_Q2RYR0 Response regulator receiver domain protein n=2 Tax=Rhodothermaceae RepID=Q2RYR0_SALRD Length = 247 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+ SR + +++ G + +DV + +R+ + I T+ G Sbjct: 163 LAFLMARHGQALSRDTIHQEVWGHDFDRGTNLIDVYVNYVRRKLDEVGCEAP-IETVRGI 221 Query: 62 GYRFCG 67 GYR+ Sbjct: 222 GYRYTA 227 >UniRef50_C1F588 TcrA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F588_ACIC5 Length = 224 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 29/67 (43%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G + SR EL++ G + T+DV I +R + +I TIHG Sbjct: 158 LEVLMRRSGLVTSREELIEAGWGSASAVKENTLDVYIHSLRTKLGDRSENRPLIRTIHGT 217 Query: 62 GYRFCGD 68 GY F D Sbjct: 218 GYTFVAD 224 >UniRef50_P76340 Probable transcriptional regulatory protein yedW n=131 Tax=Proteobacteria RepID=YEDW_ECOLI Length = 223 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + G+I R + ++ G TVDV IRR+R P ++IATI G Sbjct: 156 LWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKV-DDPFPEKLIATIRGM 214 Query: 62 GYRFCG 67 GY F Sbjct: 215 GYSFVA 220 >UniRef50_A6VYK9 Two component transcriptional regulator, winged helix family n=2 Tax=Marinomonas RepID=A6VYK9_MARMS Length = 232 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 37/69 (53%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + PG++ ++ EL +K GR+L +DR++D+ I +RK + + I T+ G Sbjct: 162 LECMLMAPGQVLTKQELSEKALGRKLTMYDRSLDMHISNLRKKIGNLENGDPRIKTVRGV 221 Query: 62 GYRFCGDLE 70 GY F + + Sbjct: 222 GYIFVSNEQ 230 >UniRef50_Q3DCX6 DNA-binding response regulator n=7 Tax=Streptococcus agalactiae RepID=Q3DCX6_STRAG Length = 223 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H P +I +R ELL + G + +R VD I +IR+ E PD I T+ G Sbjct: 158 VLFHLLSYPNRIFTRLELLDSIWGMDTDLDERVVDACINKIRRKVEHLPD--FKIETVRG 215 Query: 61 EGYR 64 GYR Sbjct: 216 VGYR 219 >UniRef50_A1SMF6 Transcriptional regulator domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SMF6_NOCSJ Length = 142 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 E G++ +R +L++ + +T+DV + +R+ P +I TI GEG Sbjct: 73 RALMERAGEVVTRDDLMRDVWHTTFWTSSKTIDVHLGWVRRKLGDDSRHPRLITTIRGEG 132 Query: 63 YRFCGDLE 70 RF + Sbjct: 133 LRFETEDR 140 >UniRef50_B7RXJ1 Response regulator receiver domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXJ1_9GAMM Length = 219 Score = 79.7 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 +L ++ ++ R LL ++ R P+DR++DV + ++RK + + E I TI G Sbjct: 149 ILLALLKSNNRVLPRDFLLNAISSRNWTPYDRSIDVLVGKLRKKLQ--CENGEYIKTIRG 206 Query: 61 EGYRFCGDL 69 +GY+FC + Sbjct: 207 QGYKFCSAV 215 >UniRef50_C8WHK8 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WHK8_EGGLE Length = 232 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Query: 1 AMLHFCENPGKIQ-SRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATI 58 + + + SR L + + G TV V IR +RK + + E + T+ Sbjct: 166 ILACLMRDQSRPVASRD-LFETVWGEIANAQSNNTVMVHIRHLRKKLAAVDSSQEFVETV 224 Query: 59 HGEGYRF 65 G GY+ Sbjct: 225 WGVGYKL 231 >UniRef50_C4ZI38 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=8 Tax=Bacteria RepID=C4ZI38_EUBR3 Length = 226 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G + +R +++ + + + RTVD+ I+ +R I T+ Sbjct: 165 LRLLMGSQGIVMTREVIMRSVWDTDFEGETRTVDMHIKTLRHKLGDYGS---RIKTVRNV 221 Query: 62 GYRFC 66 GY Sbjct: 222 GYVIE 226 >UniRef50_C7IHB4 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridium RepID=C7IHB4_9CLOT Length = 224 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + N G+I SR ++K + + +D T+ V I R+R + I T G Sbjct: 160 ILRLLMTNKGRIVSRESIMKLLWDDDQYVNDNTLTVNINRLRSRLSDLGLE-DYIETKKG 218 Query: 61 EGY 63 +GY Sbjct: 219 QGY 221 >UniRef50_Q12S47 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S47_SHEDO Length = 762 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + EN GK+ S LL+ + T+ +I ++RK I T Sbjct: 35 VLTYLAENQGKVVSHDALLENVWQGT-VVSPNTLQRSIAQLRKALGDDGKVQVYIKTHAK 93 Query: 61 EGYRFCGDLE 70 +GY D+ Sbjct: 94 QGYSLECDVR 103 >UniRef50_A5FEG3 Two-component transcriptional regulator, winged helix family n=4 Tax=Bacteroidetes RepID=A5FEG3_FLAJ1 Length = 224 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + +N G+I SR ++L + + VDV I +RK P ++I T+ G Sbjct: 160 LYYLGKNAGRIVSRDQILDNVWDINFDMNTNVVDVYITYLRKKV-DKPFKTKLIHTMKGL 218 Query: 62 GYRFCG 67 GY Sbjct: 219 GYVIKP 224 >UniRef50_A0PNV3 Two component regulator-receiver domain n=6 Tax=Actinomycetales RepID=A0PNV3_MYCUA Length = 247 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + G+I S ++L + G + V V + +R+ E+ P I+ T+ G Sbjct: 182 LDFLVQQRGRIVSATQILNAVWGYDAY-DANLVQVHVSSLRRKLEAHG--PRIVQTVRGI 238 Query: 62 GYRFCGD 68 GYR Sbjct: 239 GYRLQPP 245 >UniRef50_C9XT65 Two-component response regulator n=18 Tax=Bacteria RepID=C9XT65_CLODC Length = 232 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 32/68 (47%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + ++ GK+ + ++K++ G + +++ V + +R+ E P P I T G Sbjct: 165 ILSLLAKHHGKVLTHNFIIKEIWGSVIGNETKSLRVFMATLRRKIEKQPANPRYIITEVG 224 Query: 61 EGYRFCGD 68 GYR + Sbjct: 225 VGYRLNDE 232 >UniRef50_Q1N9M7 Two component transcriptional regulator, winged helix family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9M7_9SPHN Length = 167 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +LH + G+ SR +LL+ + + P +V+V + R+R ++ T+ G Sbjct: 99 LLHLARHAGQPHSREDLLRSIWRLDFDPGTNSVEVHMSRLRAKL-DRGHQWTMLRTVKGR 157 Query: 62 GYRFCG 67 GY Sbjct: 158 GYMLDP 163 >UniRef50_C6RM27 Transcriptional regulatory protein QseB n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RM27_ACIRA Length = 221 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +P +I +LL K+ G + ++V I +R+ + I TI G Sbjct: 158 LETLMSHPNQILKNEQLLDKLYGYQDSIESNALNVHIYHLRQKLNAD-----FIQTIRGV 212 Query: 62 GYRF 65 GY F Sbjct: 213 GYMF 216 >UniRef50_B2UQC6 Two component transcriptional regulator, winged helix family n=2 Tax=Verrucomicrobiaceae RepID=B2UQC6_AKKM8 Length = 232 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 30/71 (42%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + GK+ + +LL+++ G + + + V I +R+ + II G Sbjct: 162 ILRLLLLHQGKVMTHRQLLREIWGPQHEEDTHYLRVHIAHLRQKLGDSDPENRIIRAESG 221 Query: 61 EGYRFCGDLED 71 GYR D + Sbjct: 222 LGYRIVADGAE 232 >UniRef50_C6LFE5 DNA-binding response regulator CsrR n=2 Tax=Firmicutes RepID=C6LFE5_9FIRM Length = 247 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + EN + +R LL ++ G + VDV IR +R ++I T+ G Sbjct: 175 LKTLLENQDIVLTREVLLNRVCGYDYVGETNVVDVYIRFLRAKI-DEAFQIKMIQTVRGV 233 Query: 62 GYRFCGDLED 71 GY + D Sbjct: 234 GYVIKSEAPD 243 >UniRef50_D2YQP0 Transmembrane regulatory protein ToxR n=7 Tax=Vibrio RepID=D2YQP0_VIBMI Length = 280 Score = 79.7 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMT-GRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + + P ++ SR +L + + + D ++ I +RK + + +P+ + T+ Sbjct: 43 ILWLLAQRPNEVVSRNDLHDFVWREQGFEVDDSSLTQAISTLRKMLKDSTKSPQYVKTVP 102 Query: 60 GEGYRFCGDLE 70 GY+ +E Sbjct: 103 KRGYQLITRVE 113 >UniRef50_C6D1N2 Two component transcriptional regulator, winged helix family n=3 Tax=Bacillales RepID=C6D1N2_PAESJ Length = 232 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 ++ NP ++ SR LLKK+ RTVD+ I+R+RK +I TI+G Sbjct: 164 LVELACNPDQVYSRKVLLKKVWDIHYAGGTRTVDIHIQRLRKKLGRWHG---LIQTINGI 220 Query: 62 GYRFCGDLED 71 GY+F D Sbjct: 221 GYKFISKPPD 230 >UniRef50_C1AAZ5 Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAZ5_GEMAT Length = 239 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L E G++Q R LL+ + RTVD+ ++R+R + E+I T+ G Sbjct: 171 LLTLAERRGRVQGRGHLLETVWEAAPDIQTRTVDMHVQRLRSKLGAAG---ELIETVRGF 227 Query: 62 GYRFCG 67 GYR Sbjct: 228 GYRLRA 233 >UniRef50_A0AHH4 Complete genome n=7 Tax=Listeria RepID=A0AHH4_LISW6 Length = 220 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 5/67 (7%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 ++ N K+ +R +L ++ ++ ++ +RK E I TI G Sbjct: 159 ILVLLIRNQKKVITREMILSQVWDFAAIVDTSIINTHMKNLRKKL-----HTEKIRTIRG 213 Query: 61 EGYRFCG 67 GY+ Sbjct: 214 AGYKMDE 220 >UniRef50_Q2BRQ1 Transcriptional regulatory protein CpxR (Fragment) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRQ1_9GAMM Length = 235 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 35/68 (51%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + N G + + +L + + R+L +DR +DV + R+R+ E+I TI G Sbjct: 166 VLAYLIANAGSVLEKEQLTELVLHRKLAAYDRAIDVHVSRVRQKLAKHLSDAELIKTIRG 225 Query: 61 EGYRFCGD 68 GY+F D Sbjct: 226 VGYQFVKD 233 >UniRef50_Q03V75 DNA-binding response regulator, OmpR family (Rec-wHTH domains) n=17 Tax=Lactobacillales RepID=Q03V75_LEUMM Length = 233 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + + +N I +R ++ ++ G + V++ + +R+ E+ +I T+ Sbjct: 161 ILTYLAQNKNIIVTRDQIFDRVWGIDSDTTINVVNIYLNNLRRKLEAVGQN-NLIKTLRN 219 Query: 61 EGYRFCGDLED 71 G+ + + Sbjct: 220 IGFILEVEDAE 230 >UniRef50_Q893J9 Transcriptional regulatory protein n=1 Tax=Clostridium tetani RepID=Q893J9_CLOTE Length = 159 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Query: 1 AMLHFCENPGKIQSRAELLKK-MTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIH 59 + F N K+ SR E+L K + G T+ V I+RIR E PE I T Sbjct: 88 IL-IFMTNAKKVMSREEILNKLIEGEGSYFDTNTLSVYIKRIRDKIEEDSSNPEYIKTKR 146 Query: 60 GEGYRFCGDLE 70 G GY + ++E Sbjct: 147 GIGYEWSLEVE 157 >UniRef50_C7QB96 Two component transcriptional regulator, winged helix family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QB96_CATAD Length = 273 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 5/68 (7%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + P + +R +LL ++ RTVD ++ +R+ + I T+HG Sbjct: 200 LACLAGQPRTVLTREKLLAEVWDWMDASGTRTVDSHVKAVRRKIGAD-----WIRTVHGV 254 Query: 62 GYRFCGDL 69 GY + Sbjct: 255 GYALEAEP 262 >UniRef50_D1VGE4 Two component transcriptional regulator, winged helix family n=1 Tax=Frankia sp. EuI1c RepID=D1VGE4_9ACTO Length = 271 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + +PGK+ ++ +LL ++ G + + R+R+ E P P + T G Sbjct: 206 LKVLLSHPGKLVTQRQLLTEVWGANYGSETHYLRTYLNRLRQKLEEDPARPRHLLTDPGM 265 Query: 62 GYRFCG 67 GYRF Sbjct: 266 GYRFQP 271 >UniRef50_C7I2P3 Two component transcriptional regulator, winged helix family n=1 Tax=Thiomonas intermedia K12 RepID=C7I2P3_THIIN Length = 256 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 35/64 (54%) Query: 3 LHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEG 62 LHF +N ++ +R L++ + G + RTVDV + +R+ P++ + +++G G Sbjct: 175 LHFLQNVNRLLTRDFLIQTIWGLRPEVETRTVDVHVSALRRKLRLQPESGWRLVSVYGRG 234 Query: 63 YRFC 66 YR Sbjct: 235 YRLE 238 >UniRef50_A4T1Y6 Response regulator receiver protein n=8 Tax=Mycobacterium RepID=A4T1Y6_MYCGI Length = 292 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + +NPG+ + L + + G + V + +R+ P P + T+ G Sbjct: 226 ILRALSDNPGEPVTCRRLQESLWGASHPGGRAALGVHVGNLRRKLGDDPTCPRYVRTVRG 285 Query: 61 EGYRFCG 67 GY G Sbjct: 286 IGYCLVG 292 >UniRef50_Q2NZ71 Two-component system regulatory protein n=18 Tax=Proteobacteria RepID=Q2NZ71_XANOM Length = 242 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F E+P ++ SR +LL+ GR+ +DR +D I R+R+ E+I T+ E Sbjct: 173 LRTFVEHPQRVLSRDQLLECARGRDTDVYDRAIDSQISRLRRKINER-VHTELIRTVRNE 231 Query: 62 GYRFCGDL 69 GY + Sbjct: 232 GYMLLPSV 239 >UniRef50_Q82BP8 Putative two-component system response regulator n=1 Tax=Streptomyces avermitilis RepID=Q82BP8_STRAW Length = 282 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + E+PG + SR ++L ++ + +T+DV + +R+ P I T+ G Sbjct: 206 LALLTEDPGAVYSRQQILDRVWDPHYQGPTKTLDVHVATLRRKLG----HPAWIQTLRGV 261 Query: 62 GYRFCGDLE 70 G+R E Sbjct: 262 GFRLAVHTE 270 >UniRef50_C6VUR1 Two component transcriptional regulator, winged helix family n=3 Tax=Sphingobacteriales RepID=C6VUR1_DYAFD Length = 226 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +++ EN K+ +R+++L+ + + + VDV I +R + ++I T+ G Sbjct: 160 LVYLMENQNKVLTRSQILQVVWSTNMDTYTNVVDVYISYLRNKIDVDFPD-KLIRTVKGT 218 Query: 62 GYRFCGD 68 GY Sbjct: 219 GYMIASQ 225 >UniRef50_B8IF93 Two component transcriptional regulator, winged helix family n=12 Tax=Bacteria RepID=B8IF93_METNO Length = 229 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + ++ GK+ + A LL+++ G + + V +R++R+ E P+ P I T G Sbjct: 164 LRLLVQHAGKVLTHAFLLREIWG--AVADPQYLRVYVRQLRQKIEPDPERPRYILTETGV 221 Query: 62 GYRFCGDL 69 GYR Sbjct: 222 GYRLRAPD 229 >UniRef50_C8SEM3 Two component transcriptional regulator, winged helix family n=3 Tax=Rhizobiales RepID=C8SEM3_9RHIZ Length = 259 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 38/70 (54%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 +L FC NPG++ SR ELL P +R+VDV + RIR+ E P ++ T+ Sbjct: 189 LLAFCRNPGRVLSREELLSVTHAGLAGPIERSVDVHVSRIRQKIEKDARDPVLLRTVRLG 248 Query: 62 GYRFCGDLED 71 GY F +E+ Sbjct: 249 GYIFTATVEE 258 >UniRef50_C6J108 Multi-component transcriptional regulator n=2 Tax=Bacillales RepID=C6J108_9BACL Length = 248 Score = 79.3 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%) Query: 5 FCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR 64 ++ + SR EL+ + G E + R VD I+ IR+ + I T+ G GY+ Sbjct: 178 LAKSEQRAFSREELVNLIWGDEYEGEVRVVDTHIKNIREKTQKAGLGYNPIQTVWGVGYK 237 Query: 65 FCG 67 F G Sbjct: 238 FNG 240 >UniRef50_A8ZMZ0 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMZ0_ACAM1 Length = 673 Score = 79.3 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 32/70 (45%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + + + S EL+ ++ E P TV IRR+R+ ++I+T+HG Sbjct: 158 LALLMRDSQHVFSCEELIDRLWSSEDFPSPATVRSHIRRLRQKLSEAGAPKDLISTVHGR 217 Query: 62 GYRFCGDLED 71 GY +++ Sbjct: 218 GYYLKPLIDN 227 >UniRef50_C8WMN2 Two component transcriptional regulator, winged helix family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMN2_EGGLE Length = 243 Score = 79.3 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + P K+ ++ EL + E ++ ++V + IR + E I T+ G Sbjct: 178 ILEALVRRPRKVFTKRELFEIAWNEESAVEEKAINVHVSNIRSKLRAAHSAGE-IETVWG 236 Query: 61 EGYRFCG 67 G++ Sbjct: 237 IGFKLAE 243 >UniRef50_B4WG55 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WG55_9SYNE Length = 636 Score = 79.3 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F +P ++ S LL K+ + P + TV +RR+R+ P++I T+HG Sbjct: 158 LELFLRSPHQVYSATVLLGKLWSSQEFPSEATVRSHLRRLRQKLSQAGAAPDLIETVHGL 217 Query: 62 GYRFCG 67 GYR Sbjct: 218 GYRLKS 223 >UniRef50_A4TWE5 Two component response regulator n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWE5_9PROT Length = 191 Score = 79.3 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + H G + R ELL ++ G T++ I R+R+ E+ P ++ T G Sbjct: 125 ILAHLLA-AGSVVGRDELLARVWGYGNDISTHTLETHIYRLRQKIEADPSQASLLLTEAG 183 Query: 61 EGYRFCGD 68 GYR + Sbjct: 184 -GYRLNPE 190 >UniRef50_C6LDD6 DNA-binding response regulator n=3 Tax=Clostridiales RepID=C6LDD6_9FIRM Length = 130 Score = 79.3 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDR-TVDVTIRRIRKHFESTPDTPEIIATIH 59 + NP ++ + + + + + R + I ++RK PD P I ++ Sbjct: 62 ILALLIANPKRVFTYELITDLVWKEDCDFYSRKAIHNHISKLRKKLRFEPDLPNYIESVA 121 Query: 60 GEGYRFC 66 G GY+F Sbjct: 122 GIGYKFE 128 >UniRef50_B9Y2I0 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B9Y2I0_9FIRM Length = 239 Score = 79.3 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 26/68 (38%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGE 61 + F N GK+ + L+ + G + + + +R+ E P P I T G Sbjct: 166 LSLFLRNSGKVLTTRYLISAIWGSGYGEDTQALRALMAGLRRKIEENPAKPRYIVTEIGV 225 Query: 62 GYRFCGDL 69 GYR Sbjct: 226 GYRLVEQE 233 >UniRef50_A8SYK9 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8SYK9_9FIRM Length = 253 Score = 79.3 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query: 1 AMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHG 60 + EN GK+ +R LL + G + + DR VD +R++R S I T+ G Sbjct: 189 ILKILLENKGKVITRERLLVDIWGYDYEGSDRCVDNHVRKLRAGIGSAGKQ---IKTVIG 245 Query: 61 EGY 63 +GY Sbjct: 246 KGY 248 >UniRef50_C5B7S6 Transcriptional activator CadC n=2 Tax=Enterobacteriaceae RepID=C5B7S6_EDWI9 Length = 548 Score = 79.0 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%) Query: 2 MLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFES-TPDTPEIIATIHG 60 + +F +P + SR EL+ + R + V I +RK+ + P+ PE I T+ Sbjct: 37 LSYFAHHPDMVLSRDELIDNVWKRN-IVTNHVVTQCISELRKYLKDGRPEAPEYIVTVPK 95 Query: 61 EGYRFCGDL 69 GY+ + Sbjct: 96 RGYKLVESV 104 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.319 0.227 0.842 Lambda K H 0.267 0.0694 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 975,618,226 Number of Sequences: 3077464 Number of extensions: 66404228 Number of successful extensions: 148862 Number of sequences better than 1.0e-01: 1000 Number of HSP's better than 0.1 without gapping: 6550 Number of HSP's successfully gapped in prelim test: 2419 Number of HSP's that attempted gapping in prelim test: 135119 Number of HSP's gapped (non-prelim): 9129 length of query: 71 length of database: 1,040,396,356 effective HSP length: 43 effective length of query: 28 effective length of database: 908,065,404 effective search space: 25425831312 effective search space used: 25425831312 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 89 (38.1 bits)