278 c1vliA_ Probab=24.03   E-value=50  Score=13.85  Aligned_columns=104  Identities=14%

Q ss_pred             HHHHHHHHHHHCCCEEEEEECCCC------------------CCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHH
Q ss_conf             999999998501793999951887------------------77789999999999984069817999986403099999
Q batch____        65 EQLAHQANLVNRAKRYLAYFQAYT------------------STFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAV  126 (309)
Q Consensus        65 e~i~~~~~~~~~~~~~i~~f~~~t------------------~~~~~~~~l~~l~~~~~~~~~~~~i~~~trpd~l~~e~  126 (309)
                      +...++.+...+.+..-+-||.+.                  ...++.++..++.+.+.+.    ++.+.+.|  .+.+.
T Consensus        31 ~~A~~lI~~A~~aGadaVKFQt~~~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~----Gi~f~sTp--fd~~s  104 (358)
T c1vliA_          31 DQAFALIDAAAEAGADAVKFQXFQADRXYQKDPDVSIFSLVQSXEXPAEWILPLLDYCREK----QVIFLSTV--CDEGS  104 (358)
T ss_dssp             HHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCCCCCHHHHGGGBSSCGGGHHHHHHHHHHT----TCEEECBC--CSHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHC----CCEEEEEE--CCHHH
T ss_conf             9999999999971997898420142100156556304577753169989999999999975----98299834--79999


Q ss_pred             HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCC----------CCCHHHHHHHHHHHHHCC
Q ss_conf             999998389818999740511189899997302----------599999999999986179
Q batch____       127 LDLLCEYKDQGYEVWLELGLQTAHDKTLHRINR----------GHDFACYQRTTQLARQRG  177 (309)
Q Consensus       127 l~~L~~~g~~~~~i~ie~Giqs~~~~~L~~i~r----------g~~~~~~~~~~~~~~~~G  177 (309)
                      +++|.++++.-+.+.   .-+-.|-..|+.+-+          ..+.+++.++++.+++.|
T Consensus       105 vd~l~~~~v~~~KIa---S~el~n~pLL~~~A~~gkPvilSTGmatl~Ei~~Av~~i~~~g  162 (358)
T c1vliA_         105 ADLLQSTSPSAFKIA---SYEINHLPLLKYVARLNRPXIFSTAGAEISDVHEAWRTIRAEG  162 (358)
T ss_dssp             HHHHHTTCCSCEEEC---GGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTT
T ss_pred             HHHHHHCCCCEEEEC---HHHCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf             999986399869984---1227988999999631897185135468899999999999679