44 c3rl4A_ Probab=98.21   E-value=2.5e-05  Score=50.89  Aligned_columns=208  Identities=15%

Q ss_pred             HHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCC
Q ss_conf             51245777379999998082021104654578765668799999999999874898899976876136602311023333
Q batch____        13 IAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGL   92 (647)
Q Consensus        13 ~~~~~~~~~~~l~IL~tnD~Hg~l~~~d~~~~~~~~~gGla~lat~i~~~R~~~~ntllld~GD~~qGsp~~~~~~~~~~   92 (647)
                      +...++...-.+|++.++|+|+......                        --+.=++|.+||+-+......+..    
T Consensus        37 ~~~~~p~~~~~~r~~~isD~h~~~~~~~------------------------~p~~DvlI~aGDlT~~G~~~e~~~----   88 (275)
T c3rl4A_          37 IPYDTPKPAGHTRFVCISDTHSRTDGIQ------------------------MPYGDILLHTGDFTELGLPSEVKK----   88 (275)
T ss_dssp             CCTTSCCCTTEEEEEEEBCCTTCCTTCC------------------------CCSCSEEEECSCCSSSCCHHHHHH----
T ss_pred             CCCCCCCCCCCEEEEEEECCCCCCCCCC------------------------CCCCCEEEECCCCCCCCCHHHHHH----
T ss_conf             7767888998579999914588843378------------------------888889999085677888999999----


Q ss_pred             CCCCCCHHHHHHHHCCCCE--EEECCCCCCCCHHHHHHHHHHC---CCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECC
Q ss_conf             4444446889995269979--9943652008999999998635---9989998865368887553771443334321013
Q batch____        93 KAGDIHPVYKALNTLDYTV--GTLGNHEFNYGLDYLKNALAGA---KFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDG  167 (647)
Q Consensus        93 ~~~~~~p~i~~mN~lgyDa--~~lGNHEFD~G~~~L~~~~~~a---~fp~L~aNv~~~~~~~~~~~py~i~~~~~~~~~g  167 (647)
                             ..+.|..+....  +..||||+-+-.+...+.....   .......++....++..+.....+.         
T Consensus        89 -------~~~~L~~l~~~~~ivV~GNHD~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~---------  152 (275)
T c3rl4A_          89 -------FNDWLGNLPYEYKIVIAGNHELTFDKEFMADLVFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVT---------  152 (275)
T ss_dssp             -------HHHHHHTSCCSEEEECCCTTCGGGCHHHHHHCCCHHHHTCCHHHHTTTGGGCTTSEECSSEEEE---------
T ss_pred             -------HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCCEE---------
T ss_conf             -------9999984899759998067543246688875201111110014532100214671453176246---------


Q ss_pred             CCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC-------CCCCHHH
Q ss_conf             454289999940063323234655468828814999999999998502698999998358776555-------5431047
Q batch____       168 KKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPY-------KVMAENS  240 (647)
Q Consensus       168 ~~~g~kIGiiG~~~p~~~~~~~~~~~~~v~~~d~ve~a~~~v~~Lk~~g~D~IV~LsH~G~~~d~~-------~~~~~~~  240 (647)
                       ..++++...+..+......-...            ..+.....++.-..+..|+++|.-...-..       ..+....
T Consensus       153 -~~g~~i~~~~~~P~~~~~~~~~~------------~~~~~~~~~~~~p~~~~IlvtH~PP~~~~d~~~~~~~~~G~~~l  219 (275)
T c3rl4A_         153 -VKGFRIYGAPWTPWFNGWGFNLP------------RGQSLLDKWNLIPEGTDILMTHGPPLGFRDWVPKELQRVGCVEL  219 (275)
T ss_dssp             -ETTEEEEEECCEECSSSCTTEEC------------TTHHHHHHHTTSCTTCSEEEESSCBTTSSCEETTTTEECSBHHH
T ss_pred             -EEEEEEECCCCCCCCCCCCCCCC------------CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH
T ss_conf             -64001222567775678665623------------16899998862888745999828898865432237813669999


Q ss_pred             HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             88997389976998278664125665677666532557778579994458
Q batch____       241 VYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVMPGM  290 (647)
Q Consensus       241 ~~~~~~v~gID~Ii~GHsH~~~~~~~~~~~~~~~~~~~~~~g~~ivqag~  290 (647)
                      ...+.+--..+++|.||.|..+             ...+.+.+.++.|..
T Consensus       220 l~~i~~~~~p~l~ifGHiH~~~-------------g~~~~G~t~~vNas~  256 (275)
T c3rl4A_         220 LNTVQRRVRPKLHVFGHIHEGY-------------GTMTDGYTTYINAST  256 (275)
T ss_dssp             HHHHHHTTCCSEEEECSCGGGC-------------EEEECSSCEEEECBC
T ss_pred             HHHHHHHCCCCEEEECCCCCCC-------------CEEEECCEEEEECCE
T ss_conf             9999997598399988766746-------------659846979992604