6 c1oidA_ Probab=100.00  E-value=0  Score=687.20  Aligned_columns=497  Identities=20%

Q ss_pred             CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HCCCEEEEECCCCCCCCHHHHHCCCCCC
Q ss_conf             577737999999808202110465457876566879999999999987----4898899976876136602311023333
Q batch____        17 VNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLINDARN----EVKNSVLVDNGDLIQGSPLADYMSAKGL   92 (647)
Q Consensus        17 ~~~~~~~l~IL~tnD~Hg~l~~~d~~~~~~~~~gGla~lat~i~~~R~----~~~ntllld~GD~~qGsp~~~~~~~~~~   92 (647)
                      +...+++|+||||||+||++.++++      ..+|+++++++++++|+    +++++|+|++||+++|+|++++..++. 
T Consensus         2 ~~~~~~~l~il~~sD~H~~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~GD~~~gs~~~~~~~g~~-   74 (525)
T c1oidA_           2 EQDKTYKITVLHTNDHHGHFWRNEY------GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEP-   74 (525)
T ss_dssp             CTTCCEEEEEEEECCCTTCCSCCTT------SCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHH-
T ss_pred             CCCCCEEEEEEEECCHHHCCCCCCC------CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCHH-
T ss_conf             7767289999998280230115776------557856689999999999872599899997587777873553128678-


Q ss_pred             CCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEE
Q ss_conf             44444468899952699799943652008999999998635998999886536888755377144333432101345428
Q batch____        93 KAGDIHPVYKALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTL  172 (647)
Q Consensus        93 ~~~~~~p~i~~mN~lgyDa~~lGNHEFD~G~~~L~~~~~~a~fp~L~aNv~~~~~~~~~~~py~i~~~~~~~~~g~~~g~  172 (647)
                             ++++||+||||++++||||||||.+.|.++++.++||||+||++++.++++.++||.|+++         +|+
T Consensus        75 -------~~~~ln~~g~d~~~~GNHefd~g~~~l~~~~~~~~~~~l~aNi~~~~~~~~~~~p~~i~~~---------~g~  138 (525)
T c1oidA_          75 -------DFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR---------QDL  138 (525)
T ss_dssp             -------HHHHHHHHTCCEEECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTCCBSSCCEEEEEE---------TTE
T ss_pred             -------HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCEEEEEE---------CCE
T ss_conf             -------9999974799799945730018999999999872998898222006788654166699996---------891


Q ss_pred             EEEEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHH-CCCCEEEEEEECCCCCCCCCCCCH---HHHHHHHHCC
Q ss_conf             999994006332323465546882881499999999999850-269899999835877655554310---4788997389
Q batch____       173 KIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMRE-KGADVVVVLAHSGLSADPYKVMAE---NSVYYLSEIP  248 (647)
Q Consensus       173 kIGiiG~~~p~~~~~~~~~~~~~v~~~d~ve~a~~~v~~Lk~-~g~D~IV~LsH~G~~~d~~~~~~~---~~~~~~~~v~  248 (647)
                      ||||||++++.++.+..+....++.|.|+++++++++++||+ ++||+||+|+|.|...+.......   .....+.+.+
T Consensus       139 ki~iiG~~~~~~~~~~~~~~~~~~~~~d~~e~~~~~~~~l~~~~~~D~iI~l~H~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (525)
T c1oidA_         139 KIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGCNAPGDVEMARALPAG  218 (525)
T ss_dssp             EEEEEEEECTTHHHHSCGGGGTTEEECCHHHHHHHHHHHHHHTTCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTT
T ss_pred             EEEEEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf             79999963245443347555588188279999999999998528986999983178877676643342058889732447


Q ss_pred             CCCEEEECCCCCCC-----CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCEEEECCC
Q ss_conf             97699827866412-----5665677666532557778579994458831899999999737983999503312554033
Q batch____       249 GVNAIMFGHAHAVF-----PGKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYD  323 (647)
Q Consensus       249 gID~Ii~GHsH~~~-----~~~~~~~~~~~~~~~~~~~g~~ivqag~~g~~lg~i~l~~~~~~~~~~v~~~~~~~~~~~~  323 (647)
                      +||+||+||+|+.+     ........++.......+++++|||+|+||+++|+++|+++  ++.+.+.+.+...+....
T Consensus       219 ~vD~ii~GH~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~ag~~~~~vg~i~l~~~--~~~~~~~~~~~~~~~~~~  296 (525)
T c1oidA_         219 SLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFR--NGEMKMVNYQLIPVNLKK  296 (525)
T ss_dssp             SSSEEECCSSCCBCCEEETTEECSSCCTTSCCCCEEETTEEEECBCSTTSEEEEEEEEEE--TTEEEEEEEEEEESSCEE
T ss_pred             CCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEE--CCCEEEEEEEEEECCCCC
T ss_conf             941998678773311346676555545665335567774289960788259999999998--895468763210024565


Q ss_pred             CCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC--CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             34444----------4322688999999999999998734600885302356521--24357089999999999998541
Q batch____       324 IANKK----------SLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYSYLA--LVQDDPTVQVVNNAQKAYVEHYI  391 (647)
Q Consensus       324 ~~~~~----------~~~~~d~~i~~~~~~~~~~~~~~~~~~Ig~~~~~l~~~~~--~~~e~~~~~liada~~~~~~~~~  391 (647)
                      .....          ...++|+++.+++++++.++.++++++||++...+.+.+.  +..||+++++++|++++++..++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~ig~~~~~l~~~~~~~~~~~s~l~~~iada~~~~~~adi  376 (525)
T c1oidA_         297 KVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADF  376 (525)
T ss_dssp             EEECSSSCEEEEESSCCCCCCHHHHHHHHHHHHHHHHHTTSEEEEESSCBCCCHHHHTTSCCHHHHHHHHHHHHHHTCSE
T ss_pred             CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE
T ss_conf             41125654200014667768989999999999988876233237522666666433345656088999999998609989


Q ss_pred             CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             25544444310000001245410266544576765741377899857669747999983899999999687513476776
Q batch____       392 QGDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPN  471 (647)
Q Consensus       392 ~~~~~~~~~~~~s~~a~~~~gg~~~~~~~~~~i~~G~IT~~di~~~~Pf~N~l~~~~itG~qLk~~LE~sa~~~~~~~~~  471 (647)
                                           ++.|++++|.++++|+||++|+++++||+|++++++|||+|||++||++++.+.+    
T Consensus       377 ---------------------a~~n~g~ir~~i~~G~it~~di~~~~Pf~n~l~~~~itG~~l~~~Le~~~~~~~~----  431 (525)
T c1oidA_         377 ---------------------AVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPD----  431 (525)
T ss_dssp             ---------------------EEEEGGGCCCCBCSEEEEHHHHHHHSCSCCEEEEEEEEHHHHHHHHHHHTTSCSS----
T ss_pred             ---------------------EEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHCCCC----
T ss_conf             ---------------------9991666567776454049899975476873799997289999999988625788----


Q ss_pred             CCCCCCCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCEEEEEEEEEECCCC-C
Q ss_conf             654421235556676555213457999826788533344333247884688999998988757979999976540368-9
Q batch____       472 STKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGG-K  550 (647)
Q Consensus       472 ~~~~~~~~~~~~~~~~~f~~isGl~y~~D~t~p~~~~~~~~~~~~~g~RI~~l~~~G~pi~~~~~y~Vatn~y~a~GG-~  550 (647)
                                    .++|+|++|++|++|                 |+||.+++++|+||+|+++|+||||||++.|| +
T Consensus       432 --------------~~~~~~~sG~~~~~~-----------------~~ri~~i~~~g~pi~~~~~Y~va~~~y~~~Ggdg  480 (525)
T c1oidA_         432 --------------SGAYPQFANVSFVAK-----------------DGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDG  480 (525)
T ss_dssp             --------------STTCEEEESEEEEEC-----------------SSCEEEEEETTEECCTTSEEEEEEEHHHHTTGGG
T ss_pred             --------------CCCCEEEEEEEEEEE-----------------CCEEEEEEECCEECCCCCEEEEEEEEEEECCCCC
T ss_conf             --------------777406601699961-----------------9868889998898881387999985443057985


Q ss_pred             CCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCEE-CCCCCCEE
Q ss_conf             621357733441771079999999985012378220-56677627
Q batch____       551 FAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIH-PAADNNWR  594 (647)
Q Consensus       551 ~~~~~~~~~~~~~~~~~rd~l~~yi~~~~~~~~~i~-~~~~~nw~  594 (647)
                      |++|..++....++..+||+|++||+++.....++. |+.+.||+
T Consensus       481 ~~~~~~~~~~~~~~~~~~d~~~~yl~~~~~~~~~~~~p~~~~~~~  525 (525)
T c1oidA_         481 YPRLDNKCGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ  525 (525)
T ss_dssp             CCCCTTSTTEEEEEEEHHHHHHHHHHHHCSBCGGGGSCCSCEEEC
T ss_pred             CHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             333117871032673489999999998088163421656540039