64 c1qapA_ Probab=97.41   E-value=0.0002  Score=48.37  Aligned_columns=134  Identities=20%

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
Q ss_conf             87899868999999999997599889994587899549989999999999999663798499998345588079999999
Q batch____        76 FPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKAS  155 (259)
Q Consensus        76 FP~G~~~t~~K~~E~~~Ai~~GA~EID~Vin~~~l~~g~~~~v~~ei~~v~~~~~~~~~~lKVIlEt~~L~~~e~I~~a~  155 (259)
                      |..=...+..+..+.+.+.--|++---+.+.=.-+...++-.+...+...++..+...-..|+++|...+.+       .
T Consensus       142 ~~TRKt~Pg~r~~~~~Av~~GG~~~hR~~L~d~ilik~nHi~~~g~~~~av~~~r~~~p~~~I~Vevdt~ee-------a  214 (289)
T c1qapA_         142 LDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENLDE-------L  214 (289)
T ss_dssp             ECCSCCCTTCHHHHHHHHHHHTCBCCCSSSSSCEEECHHHHHHHSSHHHHHHHHHHHSTTSCEEEEESSHHH-------H
T ss_pred             EECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCHHH-------H
T ss_conf             854568943899999998726952100001211112203566315189999999985899829999669899-------9


Q ss_pred             HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf             99995199989847888889999899999999854226656304862188889999999997543222456415898733
Q batch____       156 EISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRF  235 (259)
Q Consensus       156 ~~a~~aGadFIKTSTGf~~~gAT~e~V~lm~~~i~~~~~g~~vgiKaaGGIrt~~~a~~~l~l~~~~lG~~~i~aga~Ri  235 (259)
                      ..+.++|+|.|.--++      +|++++-+++.+     .+++.|-||||| |.+.+..            +.++|++.|
T Consensus       215 ~eA~~~gad~I~LD~~------~~~~lk~~v~~i-----~~~v~I~aSGGI-~~~ni~~------------~a~~GvD~i  270 (289)
T c1qapA_         215 DDALKAGADIIMLDNF------NTDQMREAVKRV-----NGQARLEVSGNV-TAETLRE------------FAETGVDFI  270 (289)
T ss_dssp             HHHHHTTCSEEEESSC------CHHHHHHHHHTT-----CTTCCEEECCCS-CHHHHHH------------HHHTTCSEE
T ss_pred             HHHHHCCCCEEEECCC------CHHHHHHHHHHH-----CCCCEEEEECCC-CHHHHHH------------HHHCCCCEE
T ss_conf             9998559989998699------989999999962-----887469998899-9899999------------995799899


Q ss_pred             ECCHH
Q ss_conf             01238
Q batch____       236 GASSL  240 (259)
Q Consensus       236 GtSs~  240 (259)
                      +++++
T Consensus       271 ~vGsl  275 (289)
T c1qapA_         271 SVGAL  275 (289)
T ss_dssp             ECSHH
T ss_pred             EECCH
T ss_conf             98222