BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (348 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75747 Protein abrB n=117 Tax=Bacteria RepID=ABRB_ECOLI 674 0.0 UniRef50_C6DHB0 Membrane protein AbrB duplication n=5 Tax=Pectob... 347 3e-94 UniRef50_C4LFP7 Membrane protein AbrB duplication n=3 Tax=Proteo... 340 5e-92 UniRef50_Q2RP17 Putative ammonia monooxygenase n=4 Tax=Alphaprot... 281 2e-74 UniRef50_B0UQK6 Membrane protein AbrB duplication n=9 Tax=Proteo... 273 5e-72 UniRef50_C8SMW8 Membrane protein AbrB duplication n=5 Tax=cellul... 267 5e-70 UniRef50_B8ELT3 Membrane protein AbrB duplication n=6 Tax=Rhizob... 257 5e-67 UniRef50_C4XND2 Hypothetical membrane protein n=1 Tax=Desulfovib... 252 2e-65 UniRef50_Q223M5 Putative ammonia monooxygenase n=1 Tax=Rhodofera... 251 2e-65 UniRef50_B6ALI3 Putative ammonia monooxygenase n=2 Tax=Leptospir... 247 5e-64 UniRef50_Q48HD1 AbrB protein n=9 Tax=Gammaproteobacteria RepID=Q... 246 1e-63 UniRef50_Q11GX1 Putative ammonia monooxygenase n=1 Tax=Chelativo... 243 1e-62 UniRef50_C8WDL2 Membrane protein AbrB duplication n=6 Tax=Zymomo... 242 2e-62 UniRef50_B5ZWF3 Membrane protein AbrB duplication n=9 Tax=Alphap... 240 5e-62 UniRef50_C6HYJ9 Putative ammonia monooxygenase n=1 Tax=Leptospir... 227 5e-58 UniRef50_A6VSZ2 Putative ammonia monooxygenase n=1 Tax=Marinomon... 224 4e-57 UniRef50_Q4KE96 Ammonia monooxygenase family protein n=1 Tax=Pse... 211 4e-53 UniRef50_UPI0000383818 COG3180: Putative ammonia monooxygenase n... 177 6e-43 UniRef50_Q3IVJ5 AbrB protein (AidB regulator) n=3 Tax=Rhodobacte... 158 3e-37 UniRef50_Q09A72 AbrB protein n=2 Tax=Cystobacterineae RepID=Q09A... 141 4e-32 UniRef50_C2AL91 Membrane protein AbrB duplication n=7 Tax=Coryne... 132 3e-29 UniRef50_C9YG31 Protein abrB n=1 Tax=Curvibacter putative symbio... 130 6e-29 UniRef50_A1T9W3 Putative ammonia monooxygenase n=1 Tax=Mycobacte... 130 7e-29 UniRef50_A5G1A0 Putative ammonia monooxygenase n=1 Tax=Acidiphil... 117 8e-25 UniRef50_D1VJI4 Membrane protein AbrB duplication n=1 Tax=Franki... 116 2e-24 UniRef50_C4LH35 Putative membrane protein n=1 Tax=Corynebacteriu... 115 3e-24 UniRef50_D2S6B3 Membrane protein AbrB duplication n=2 Tax=Actino... 114 4e-24 UniRef50_Q0S615 Possible ammonia monooxygenase n=2 Tax=Rhodococc... 112 2e-23 UniRef50_B7KIK2 Membrane protein AbrB duplication n=3 Tax=Cyanob... 109 2e-22 UniRef50_D0L4U6 Membrane protein AbrB duplication n=1 Tax=Gordon... 105 3e-21 UniRef50_C2AKB5 Membrane protein AbrB duplication n=1 Tax=Tsukam... 103 1e-20 UniRef50_B4AWS0 Membrane protein AbrB duplication n=3 Tax=Cyanob... 98 5e-19 UniRef50_C0VV00 Ammonia monooxygenase n=2 Tax=Corynebacterium gl... 97 7e-19 UniRef50_UPI0001C32335 membrane protein AbrB duplication n=1 Tax... 97 8e-19 UniRef50_C0XTR9 Ammonia monooxygenase n=1 Tax=Corynebacterium li... 94 1e-17 UniRef50_C2BYG7 Possible ammonia monooxygenase n=1 Tax=Listeria ... 91 5e-17 UniRef50_C9S1X9 Membrane protein AbrB duplication n=5 Tax=Geobac... 87 8e-16 UniRef50_C6CTI7 Membrane protein AbrB duplication n=1 Tax=Paenib... 86 2e-15 UniRef50_A8IB98 Putative ammonia monooxygenase n=1 Tax=Azorhizob... 85 4e-15 UniRef50_B1HT63 Protein abrB (AidB regulator) n=2 Tax=Bacillacea... 85 5e-15 UniRef50_A8LC15 Putative ammonia monooxygenase n=1 Tax=Frankia s... 82 3e-14 UniRef50_C8NRG7 Transport protein n=13 Tax=Corynebacterium RepID... 80 8e-14 UniRef50_C6JLU4 Putative uncharacterized protein n=2 Tax=Fusobac... 80 8e-14 UniRef50_UPI0001AF51FB hypothetical protein MkanA1_02057 n=1 Tax... 79 2e-13 UniRef50_B4AUN7 Membrane protein AbrB duplication n=1 Tax=Cyanot... 77 9e-13 UniRef50_Q2BDN3 Putative uncharacterized protein n=1 Tax=Bacillu... 76 2e-12 UniRef50_C0Z7B6 Conserved hypothetical membrane protein n=1 Tax=... 76 2e-12 UniRef50_Q8ET66 Hypothetical conserved protein n=1 Tax=Oceanobac... 76 2e-12 UniRef50_A8ER15 Putative uncharacterized protein n=1 Tax=Arcobac... 76 2e-12 UniRef50_A1HS75 Putative ammonia monooxygenase n=1 Tax=Thermosin... 75 3e-12 UniRef50_C5SZI4 Membrane protein AbrB duplication n=1 Tax=Acidov... 75 3e-12 UniRef50_A3JPA2 Putative ammonia monooxygenase n=1 Tax=Rhodobact... 74 6e-12 UniRef50_Q9RC51 BH3837 protein n=3 Tax=Bacillus RepID=Q9RC51_BACHD 74 7e-12 UniRef50_A8Z2I6 Possible ammonia monooxygenase n=51 Tax=Staphylo... 74 8e-12 UniRef50_Q1YFT4 Possible ammonia monooxygenase n=2 Tax=Aurantimo... 74 8e-12 UniRef50_A6TSB9 Putative ammonia monooxygenase n=1 Tax=Alkaliphi... 74 9e-12 UniRef50_Q7D1Z3 Putative uncharacterized protein n=1 Tax=Agrobac... 73 1e-11 UniRef50_B9R4Z7 Putative ammonia monooxygenase superfamily n=1 T... 73 2e-11 UniRef50_A7IC16 Putative ammonia monooxygenase n=2 Tax=Xanthobac... 72 2e-11 UniRef50_D0RN43 Putative ammonia monooxygenase superfamily prote... 72 3e-11 UniRef50_C6Q0M4 Membrane protein AbrB duplication n=1 Tax=Clostr... 70 1e-10 UniRef50_O07568 Uncharacterized protein yhjN n=6 Tax=Bacillus Re... 69 2e-10 UniRef50_A9D2G7 Putative uncharacterized protein n=1 Tax=Hoeflea... 69 2e-10 UniRef50_A3VKP5 Putative uncharacterized protein n=1 Tax=Rhodoba... 69 2e-10 UniRef50_A0NRD3 Putative uncharacterized protein n=1 Tax=Labrenz... 69 2e-10 UniRef50_A4U1B8 Ammonia monooxygenase n=3 Tax=Magnetospirillum R... 68 4e-10 UniRef50_Q5HNN7 Membrane protein, putative n=14 Tax=Staphylococc... 68 5e-10 UniRef50_A9BSE8 Membrane protein AbrB duplication n=8 Tax=Burkho... 67 9e-10 UniRef50_D1Y8H5 Membrane protein AbrB duplication n=1 Tax=Pyrami... 67 1e-09 UniRef50_C0VNM7 Ammonia monooxygenase n=1 Tax=Acinetobacter sp. ... 67 1e-09 UniRef50_UPI00019142C7 hypothetical protein Salmonellaentericaen... 66 1e-09 UniRef50_B6AYQ5 Putative ammonia monooxygenase n=1 Tax=Rhodobact... 66 2e-09 UniRef50_A8TWK7 Putative ammonia monooxygenase n=1 Tax=alpha pro... 66 2e-09 UniRef50_Q0FTZ5 Putative ammonia monooxygenase n=1 Tax=Roseovari... 65 3e-09 UniRef50_C8RVR3 Membrane protein n=2 Tax=Corynebacterium jeikeiu... 65 4e-09 UniRef50_C3KNJ9 Possible monooxygenase n=1 Tax=Rhizobium sp. NGR... 64 6e-09 UniRef50_A3K1Y0 Putative ammonia monooxygenase n=3 Tax=Rhodobact... 64 6e-09 UniRef50_B1VGV1 Putative membrane protein n=1 Tax=Corynebacteriu... 64 6e-09 UniRef50_UPI0001C3846E membrane protein AbrB duplication n=1 Tax... 64 8e-09 UniRef50_Q1UZU3 Possible AbrB protein n=4 Tax=root RepID=Q1UZU3_... 64 9e-09 UniRef50_B6YYA2 Putative ammonia monooxygenase n=1 Tax=Pseudovib... 64 1e-08 UniRef50_D0S7S8 Putative uncharacterized protein n=1 Tax=Acineto... 62 3e-08 UniRef50_B6ITE5 Ammonia monooxygenase, putative n=1 Tax=Rhodospi... 62 4e-08 UniRef50_C9KL73 Putative membrane protein AbrB duplication n=1 T... 61 5e-08 UniRef50_B8FR89 Membrane protein AbrB duplication n=4 Tax=Desulf... 61 6e-08 UniRef50_B6R4M6 Putative ammonia monooxygenase superfamily prote... 60 2e-07 UniRef50_B5JCA9 Putative ammonia monooxygenase superfamily n=3 T... 58 4e-07 UniRef50_C5DA14 Membrane protein AbrB duplication n=2 Tax=Geobac... 58 6e-07 UniRef50_D2LU31 Membrane protein AbrB duplication n=1 Tax=Bacill... 57 1e-06 UniRef50_C1TRS0 Membrane protein AbrB duplication n=1 Tax=Dethio... 57 1e-06 UniRef50_B9YZ45 Membrane protein AbrB duplication n=2 Tax=Betapr... 57 1e-06 UniRef50_B9KW55 Ammonia monooxygenase n=1 Tax=Rhodobacter sphaer... 56 2e-06 UniRef50_D2RND1 Membrane protein AbrB duplication n=1 Tax=Acidam... 56 2e-06 UniRef50_A1AYU4 Putative ammonia monooxygenase n=5 Tax=Rhodobact... 56 2e-06 UniRef50_D0DD06 Putative ammonia monooxygenase superfamily prote... 56 2e-06 UniRef50_C1XST2 Membrane protein AbrB duplication n=1 Tax=Meioth... 56 2e-06 UniRef50_A3TX86 Putative uncharacterized protein n=1 Tax=Oceanic... 55 3e-06 UniRef50_B9E738 Putative uncharacterized protein n=1 Tax=Macroco... 55 5e-06 UniRef50_A6CU26 Putative uncharacterized protein n=1 Tax=Bacillu... 55 5e-06 UniRef50_B6WW29 Putative uncharacterized protein n=1 Tax=Desulfo... 54 1e-05 UniRef50_Q2CGP3 Possible AbrB protein n=1 Tax=Oceanicola granulo... 54 1e-05 UniRef50_Q167T9 Putative uncharacterized protein n=7 Tax=Rhodoba... 52 3e-05 UniRef50_A5L0B9 Ammonia monooxygenase n=1 Tax=Vibrionales bacter... 52 4e-05 UniRef50_Q399M7 Putative ammonia monooxygenase n=2 Tax=Proteobac... 52 4e-05 UniRef50_B2A0P8 Putative ammonia monooxygenase-like protein n=1 ... 52 5e-05 UniRef50_A5TXE3 Possible ammonia monooxygenase n=8 Tax=Fusobacte... 52 5e-05 UniRef50_B4U2X4 Putative ammonia monooxygenase n=3 Tax=Streptoco... 51 7e-05 UniRef50_Q8KVY0 RC210 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KVY0_9RHOB 50 1e-04 UniRef50_B3QBE9 Membrane protein AbrB duplication n=9 Tax=Bradyr... 50 1e-04 UniRef50_A8VW34 Beta-lactamase n=1 Tax=Bacillus selenitireducens... 48 6e-04 UniRef50_A3VX57 Putative uncharacterized protein n=4 Tax=Rhodoba... 48 6e-04 UniRef50_Q1GD07 Putative ammonia monooxygenase n=2 Tax=Ruegeria ... 48 6e-04 UniRef50_B9Y4Q0 Putative uncharacterized protein n=1 Tax=Holdema... 47 0.001 UniRef50_B7RQ37 Membrane protein AbrB duplication n=4 Tax=Rhodob... 47 0.001 UniRef50_Q0RKZ8 Putative uncharacterized protein n=1 Tax=Frankia... 46 0.002 UniRef50_B8HRF2 Membrane protein AbrB duplication n=6 Tax=Cyanob... 46 0.002 UniRef50_C4ZKZ9 Membrane protein AbrB duplication n=1 Tax=Thauer... 46 0.002 UniRef50_C8S2H9 Putative ammonia monooxygenase n=1 Tax=Rhodobact... 46 0.002 UniRef50_A8VW33 Putative uncharacterized protein n=1 Tax=Bacillu... 45 0.003 UniRef50_A8TSC8 Putative ammonia monooxygenase n=1 Tax=alpha pro... 45 0.003 UniRef50_A8LSV3 Putative uncharacterized protein n=1 Tax=Dinoros... 45 0.004 UniRef50_Q0FKP2 Putative uncharacterized protein n=2 Tax=Roseova... 44 0.006 UniRef50_A4EFY2 Putative ammonia monooxygenase n=3 Tax=Bacteria ... 44 0.007 UniRef50_Q2JIQ1 Putative membrane protein n=2 Tax=Synechococcus ... 44 0.009 UniRef50_C2LN52 Membrane-associated ammonia monooxygenase n=8 Ta... 44 0.013 UniRef50_B5JBC7 Putative ammonia monooxygenase superfamily n=2 T... 42 0.041 UniRef50_Q0RKZ7 Putative uncharacterized protein n=1 Tax=Frankia... 42 0.044 >UniRef50_P75747 Protein abrB n=117 Tax=Bacteria RepID=ABRB_ECOLI Length = 348 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/348 (100%), Positives = 348/348 (100%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI Sbjct: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG Sbjct: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS Sbjct: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG Sbjct: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL Sbjct: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA Sbjct: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 >UniRef50_C6DHB0 Membrane protein AbrB duplication n=5 Tax=Pectobacterium RepID=C6DHB0_PECCP Length = 352 Score = 347 bits (891), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 174/339 (51%), Positives = 242/339 (71%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P +QWG+L +SL L G H+PAALLLGPM+ G++ + G T+++P F + A+L Sbjct: 6 PWMQWGILLSVSLSLGFGLQVYHVPAALLLGPMMVGVVMGLNGATIRIPPVCFAGSNAVL 65 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 GC++AQ+L+ SILT L WP+VL ILL TL +S + GWLLV++S LPG TG WG+SPGG Sbjct: 66 GCLVAQSLSFSILTPLLNEWPLVLFILLATLAASGLSGWLLVKFSELPGTTGTWGASPGG 125 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+AMVAM+ ++GAD+RLVAFMQYLRVL V +A V R+ LGD A + +VWFP + Sbjct: 126 ASAMVAMSGEFGADVRLVAFMQYLRVLMVTASAAFVARLSLGDEAAENSAMLVWFPSLDW 185 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 L T+ +A + + +R+PSG +L PM+ G++L + + ++ PEWLLA+AY IGW Sbjct: 186 RFLATLGVAFGSAWLARRMRIPSGALLGPMIIGSMLHASGTLHLQTPEWLLALAYAVIGW 245 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +GL F + I L A+R LP ++ SI L+ +C GMAW +T+ M +D +TA+LATSPGGLD Sbjct: 246 SVGLCFTRPIFLLAIRTLPHMMASIVGLMLLCGGMAWMVTKMMPVDMLTAFLATSPGGLD 305 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 ++A+IAAGS DMA ++AMQTLRLFS L+ P ++RFIS Sbjct: 306 SIAIIAAGSRVDMAFVIAMQTLRLFSTLVFSPILSRFIS 344 >UniRef50_C4LFP7 Membrane protein AbrB duplication n=3 Tax=Proteobacteria RepID=C4LFP7_TOLAT Length = 362 Score = 340 bits (872), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 175/340 (51%), Positives = 243/340 (71%), Gaps = 2/340 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 PV QW +L VLS + + +HLP ALLLGPM+AGI++S+ G TLQ+P + F+AAQAI+ Sbjct: 13 PVFQWILLIVLSAVFAFLMELIHLPGALLLGPMLAGIVWSLHGGTLQVPLNLFVAAQAII 72 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 GC++AQ+++ +L+T A +W + L I+L T+ +S+++GW++ + LPG T WGSSPG Sbjct: 73 GCLVAQSISSGMLSTFAQHWLLFLLIVLSTIAASSLMGWVISKLKVLPGTTAIWGSSPGA 132 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 AAAMV MA+++GAD RLVAFMQYLRV+ VA AA ++ R + D + I+WF P+ Sbjct: 133 AAAMVLMAEEFGADARLVAFMQYLRVIVVASAASVIARFWV-DTSGTTAAAIIWFSPLQW 191 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 T+LLA+ + L R+PSG ML+PM+ G LQS QL+ I+LPEWLL++AY +GW Sbjct: 192 ATAETLLLALAGIIIARLARIPSGAMLVPMILGMALQSSQLMKIDLPEWLLSIAYALMGW 251 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 RIGLGF + +L A R LPQI+LSI L+ C G+AW L H+D +TAYLATSPGG+D Sbjct: 252 RIGLGFTRAVLKHAFRALPQIILSIVLLIGFCGGLAWLLAEHFHLDPLTAYLATSPGGMD 311 Query: 302 TVAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFIS 340 T+AVIAA S N D+ +MA+QT+RLF ++ GP +AR I+ Sbjct: 312 TIAVIAATSQNVDLEFVMALQTVRLFLVIFLGPVLARLIA 351 >UniRef50_Q2RP17 Putative ammonia monooxygenase n=4 Tax=Alphaproteobacteria RepID=Q2RP17_RHORT Length = 362 Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 164/341 (48%), Positives = 227/341 (66%), Gaps = 9/341 (2%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 LQW L S + G LPAALLLGPMIA I ++ G + LPR+ +L AQA++GC Sbjct: 18 LQWLALGATSAAVGWGLHTTGLPAALLLGPMIAAICCALAGTRIHLPRAPYLGAQAMIGC 77 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 MI +++ ++ + +W + LAI+L T+ +S+++GW++ R+ SLPG T WGSSPG A+ Sbjct: 78 MIGGSISPGLIASFLDDWALFLAIVLATVAASSLLGWMMSRWGSLPGTTSVWGSSPGAAS 137 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 AMV MA+ +GAD+RLVAFMQYLRV+ VA AA L+ + + +++ Sbjct: 138 AMVVMAEAFGADVRLVAFMQYLRVVCVASAAALIAHLWVEGAPPPPTPWF-----PALDG 192 Query: 184 LL---TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 L+ T+ LA + T+G LR+PSG M++PM+A AVL S L+ I LP WLLA+AY A+G Sbjct: 193 LVFGQTLALAGIGATLGVFLRVPSGAMVVPMVAAAVLSSFGLLAIHLPPWLLALAYAALG 252 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 W IGLGF + +L A R LPQIL SI AL+A C G AW LT + +D +TAYLATSPGGL Sbjct: 253 WTIGLGFTRAVLAHAARALPQILASIAALMAFCGGTAWLLTSLLGVDPVTAYLATSPGGL 312 Query: 301 DTVAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFIS 340 D+VA+IAA S D++ +MA+QT R ++ GP +ARFI+ Sbjct: 313 DSVAIIAASSARVDLSFVMALQTARFIIVICLGPPLARFIA 353 >UniRef50_B0UQK6 Membrane protein AbrB duplication n=9 Tax=Proteobacteria RepID=B0UQK6_METS4 Length = 361 Score = 273 bits (699), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 156/323 (48%), Positives = 227/323 (70%), Gaps = 1/323 (0%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIV 84 PAALLLGPM+A I F + G +++P++AFLAAQA++GC++A + SI+ TL + ++ Sbjct: 38 FPAALLLGPMLAAIGFGVSGAAIRVPKAAFLAAQALIGCLVAHAVNASIVQTLMADGLLM 97 Query: 85 LAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQY 144 LA++ VT+L+SA VGW+L R LPG T AWGSSPG AAAMVAMA++YGAD RLVAFMQY Sbjct: 98 LAVVGVTVLASAAVGWVLTRIRLLPGTTAAWGSSPGAAAAMVAMAEEYGADPRLVAFMQY 157 Query: 145 LRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPS 204 +RV VA +A +V R ++G A A V P + +L+T+ +A + +G L +PS Sbjct: 158 VRVACVALSASIVARFLVGHAAPAALPEPVGAPE-PLAVLVTLAVAALGSWLGRRLNIPS 216 Query: 205 GTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILL 264 G M+ P++ GA L +G L ++ LP+WLLA+AY A+GW +GL F + + + LP +L Sbjct: 217 GAMIGPLVIGATLHAGGLASMSLPDWLLALAYAAVGWTVGLRFTRATVRATVSALPGVLA 276 Query: 265 SIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLR 324 + L+A+C A+GLT + ID +TA+LATSPGGLD+VA+IA GS AD++ ++A+QTLR Sbjct: 277 ATLGLIALCGLWAFGLTFLLPIDLLTAFLATSPGGLDSVAIIAVGSKADVSFVLAVQTLR 336 Query: 325 LFSILLTGPAIARFISTYAPKRS 347 L +++TGP +A++IS R+ Sbjct: 337 LLVVIITGPLVAKWISAKWSSRA 359 >UniRef50_C8SMW8 Membrane protein AbrB duplication n=5 Tax=cellular organisms RepID=C8SMW8_9RHIZ Length = 366 Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 155/338 (45%), Positives = 220/338 (65%), Gaps = 3/338 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 QW +L +S L + LPAALL+GPM+A I G T+++PR F +AQAI+GC+ Sbjct: 25 QWLVLLTISALFAGALELAALPAALLIGPMLAAIAAGTNGATVRVPRLLFGSAQAIVGCL 84 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 +A +++ I WP+ L ++ T+ +S+++GWL+ R+ LPG T WGSSPG A A Sbjct: 85 VAASISADIFPVFYREWPLFLGAVVATVAASSLLGWLISRWRILPGTTAVWGSSPGAATA 144 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN-L 183 MV MA +GAD RLVAFMQYLRV+FV+ A LV +M + D + IVWFPP+ Sbjct: 145 MVLMAGAFGADQRLVAFMQYLRVIFVSVTAALVAKMWV-DTSGIEIPPIVWFPPIDAQAF 203 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 TI +A+V G G L RLPS L + G V+ G + ++LP WLLA++Y +GW I Sbjct: 204 AATIGIAIVGGLAGKLCRLPSPFFLGTFIFGTVIHLGLGVEMQLPPWLLAVSYAMVGWSI 263 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 GL F + IL A R LPQI+ SI AL+A C G+A+ ++ + ID +TAYLATSPGG+D+V Sbjct: 264 GLNFTRPILRHATRALPQIIASIVALIAFCGGLAFLISHLLGIDPLTAYLATSPGGMDSV 323 Query: 304 AVIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFIS 340 A+IAA + N D++ +MA+Q+ R +LL GP++AR ++ Sbjct: 324 AIIAAAARNVDISFVMALQSARFLVVLLVGPSVARLVA 361 >UniRef50_B8ELT3 Membrane protein AbrB duplication n=6 Tax=Rhizobiales RepID=B8ELT3_METSB Length = 366 Score = 257 bits (656), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 166/346 (47%), Positives = 229/346 (66%), Gaps = 10/346 (2%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 QW +L LS L +G A+HLPAALLLGPM+A I+ ++ ++ P+SAF++AQA++GCM Sbjct: 21 QWAILIGLSAALVVGLEALHLPAALLLGPMLAAILLTVAEGGVRAPQSAFVSAQAVVGCM 80 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 IA +L SI + NWP+ L ++ ++++ +GWLL R+ LPG WGS+PG A+A Sbjct: 81 IAGSLPLSIGGEMLRNWPLFLGGVVSVVVAANGLGWLLARWRVLPGAAAIWGSAPGAASA 140 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH--IVWFPPVS-I 181 M+ MA+ YGAD+RLVAFMQYLRV+ VA A LV+R+ + A ++ H IVWFP V Sbjct: 141 MILMAEAYGADMRLVAFMQYLRVVCVAIVASLVSRLWV---AGPLDHHPAIVWFPAVPWT 197 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 + T+ +A + G L +P+G +L+P+ G LQSG +TI LP WLLA Y +GW Sbjct: 198 SFAETLAVAALGALAGKRLHIPAGPLLLPLAIGVTLQSGGWMTIFLPPWLLAACYCVVGW 257 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +GL F I+ A R LP++L+SI AL+AIC G A L ID +TAYLATSPGG D Sbjct: 258 SVGLRFTPAIIAYAARALPRVLVSILALIAICGGFAAILATVGGIDPLTAYLATSPGGGD 317 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 ++A+IAA S D+ +MAMQ R+ +LL GPAIARF++ KRS Sbjct: 318 SIAIIAASSKVDVPFVMAMQMARILVVLLFGPAIARFVA----KRS 359 >UniRef50_C4XND2 Hypothetical membrane protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XND2_DESMR Length = 366 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 147/317 (46%), Positives = 205/317 (64%), Gaps = 3/317 (0%) Query: 32 GPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVT 91 GPM+AGI ++ G +++LP + F+ AQA++GC+IA+ + ++L +W + ++L Sbjct: 33 GPMVAGIAVALGGASIRLPDTPFVLAQAVVGCLIARAASPAVLPEFLSHWHLFSLVILAG 92 Query: 92 LLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVA 151 +++SA +G +L R +PG T WG+SPGGAAAMV MA GAD RLVAFMQYLRVL VA Sbjct: 93 IVASAAMGLVLCRLRVMPGTTAIWGASPGGAAAMVVMADACGADARLVAFMQYLRVLCVA 152 Query: 152 GAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPM 211 AA +V R G +Q VW PP++ L + L + G RL G ML+PM Sbjct: 153 LAATVVARAAGGSAPP--HQATVWLPPLTAGLAPALGLIGLGALAGLCTRLSGGAMLVPM 210 Query: 212 LAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLA 271 GA L+ L+ I+LP WLLA AY AIGWR+GLGF +++ L A R +P IL+ I AL+A Sbjct: 211 FLGAALRLTGLVEIDLPPWLLAAAYAAIGWRVGLGFTQKVALYAARAVPAILVGILALIA 270 Query: 272 ICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGS-NADMALIMAMQTLRLFSILL 330 C G++W L + +D +TAYLA SPGG+D+VAVIAA S D A++M MQT+R F ++L Sbjct: 271 FCGGLSWLLAKTTGMDPLTAYLAASPGGMDSVAVIAASSPGVDFAVVMTMQTMRFFLVVL 330 Query: 331 TGPAIARFISTYAPKRS 347 P +ARF++ A R Sbjct: 331 LAPPMARFLAGRAEARG 347 >UniRef50_Q223M5 Putative ammonia monooxygenase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q223M5_RHOFD Length = 355 Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 151/342 (44%), Positives = 214/342 (62%), Gaps = 2/342 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 M L W +L ++S +L A+HLPA +LLG M+AGI+ S + I L +P + F AQ + Sbjct: 9 MTALWWSVLLLISAVLGWALTALHLPAGVLLGCMLAGIVLSSQEIRLGIPTTLFALAQGV 68 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +GC++A++L S L +A +WPI L + +SA +GWLL+ PG T WG +PG Sbjct: 69 VGCLMAKSLQPSTLAKVASDWPIFLGATFSIVAASAALGWLLMHRQVFPGTTAVWGLAPG 128 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 A+AMV MA+ YGAD+RLVAFMQYLRV V A LV A + + WF ++ Sbjct: 129 AASAMVLMAEAYGADVRLVAFMQYLRVAVVTAVAALVAHFWT-TRAAPMTPEVHWFAVIN 187 Query: 181 I-NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 +L T+LLA ++ L +P G M++P++ GA LQ+ + IELP LLA++Y I Sbjct: 188 PGDLGWTLLLAFAVSSIAGWLHIPGGPMVVPLVLGAALQAMGWLVIELPPALLAVSYAVI 247 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 GW IGL F + IL ALR LP +L SIFAL+ + +A GLT++ D +TAYLA+SPGG Sbjct: 248 GWSIGLRFTRAILRHALRALPAVLGSIFALMGVGLVIAVGLTQWAGHDPLTAYLASSPGG 307 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 D+VA+IAA S D +MAMQ R +L+ GP +++F++T Sbjct: 308 ADSVAIIAATSAVDAGFVMAMQLARFLMVLVLGPRVSKFVAT 349 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 1/157 (0%) Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 +L++ V G L LP+G +L MLAG VL S Q I + +P L A+A +G + Sbjct: 18 LLISAVLGWALTALHLPAGVLLGCMLAGIVLSS-QEIRLGIPTTLFALAQGVVGCLMAKS 76 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 L + P L + F+++A A + W L TA +PG + ++ Sbjct: 77 LQPSTLAKVASDWPIFLGATFSIVAASAALGWLLMHRQVFPGTTAVWGLAPGAASAMVLM 136 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 A AD+ L+ MQ LR+ + +A F +T A Sbjct: 137 AEAYGADVRLVAFMQYLRVAVVTAVAALVAHFWTTRA 173 >UniRef50_B6ALI3 Putative ammonia monooxygenase n=2 Tax=Leptospirillum sp. Group II RepID=B6ALI3_9BACT Length = 345 Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 136/332 (40%), Positives = 206/332 (62%), Gaps = 3/332 (0%) Query: 15 LLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSIL 74 +L+ FLAVHLP AL+LGPMIA I+F + TL++ R F +Q ++GCM+AQ L S+L Sbjct: 1 MLAFLFLAVHLPGALMLGPMIAAIVFGVSRSTLRVHRVPFSFSQGVVGCMVAQALKPSVL 60 Query: 75 TTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGA 134 + ++++ ++ + +GWLL R PG T WG PG A++MV MA+ YGA Sbjct: 61 HAFWQRGLLFASLVVAIIVFNCALGWLLSRAKIFPGTTAVWGLLPGAASSMVIMAEAYGA 120 Query: 135 DIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAG 194 D+RLVAF+QYLRV+ V A V L + + +WFP S L + V+AG Sbjct: 121 DVRLVAFIQYLRVVMVGFLASGVAHFSL--HHALTGKVFLWFPRFSPLALGETMAIVLAG 178 Query: 195 T-VGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILL 253 +G R+P G +LIP++AG+VL++ +I+I LP WLLA AY+ IGW +GL F + +L Sbjct: 179 MGIGSFFRIPGGMLLIPLIAGSVLEAAGMISIVLPGWLLAGAYLCIGWMVGLRFQRDVLS 238 Query: 254 RALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 R +P+ + + ++A C + + L RF+ +D +TAYLATSPGG+D VA+IAA +N Sbjct: 239 SVARMIPRTIFVLLVVIAFCGFLGFLLNRFLGVDPLTAYLATSPGGVDAVAIIAASANVK 298 Query: 314 MALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 + +MAMQ R+ ++L GP +++++ P Sbjct: 299 IGFVMAMQLSRMMMVVLIGPVFSKWVANRVPS 330 >UniRef50_Q48HD1 AbrB protein n=9 Tax=Gammaproteobacteria RepID=Q48HD1_PSE14 Length = 362 Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 138/324 (42%), Positives = 208/324 (64%), Gaps = 2/324 (0%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPI 83 ++PAA+ LGPM+ I F + G T+++P+ AF Q +G +IA ++ S+L T +W + Sbjct: 36 NMPAAMFLGPMLVAIGFGVSGATIRMPKRAFQLGQGTVGVLIAHAMSVSVLLTALQSWHV 95 Query: 84 VLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQ 143 +L ++T++ SA VG LLVR+ +P NT AWG+SPG A+AMVAM++DYGAD R+VA MQ Sbjct: 96 MLLATILTVVLSAAVGLLLVRFGGIPSNTAAWGTSPGAASAMVAMSEDYGADSRVVATMQ 155 Query: 144 YLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL-LTILLAVVAGTVGCLLRL 202 Y+RV+ V LV+ +G + H S+NL+ L + LAV+ V RL Sbjct: 156 YVRVVCVVTIGALVSHF-IGAPDSGADVHSTAAALHSLNLIDLALSLAVIVTGVALGSRL 214 Query: 203 PSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQI 262 P+G +L+P++ G LQ ++ I +P+WLL + Y AIG +GL FD+ + R LP + Sbjct: 215 PAGALLVPLMLGGALQLSGVMQISIPDWLLPVGYGAIGCYVGLRFDRPTVQYVWRRLPMM 274 Query: 263 LLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQT 322 +L+ L+ +CA AW + M D+++ YLATSPGGLDT+A+IA ++AD+ ++AMQT Sbjct: 275 ILASLLLIVLCALSAWLIAAMMGKDYLSVYLATSPGGLDTMAIIAIDTHADVGFVLAMQT 334 Query: 323 LRLFSILLTGPAIARFISTYAPKR 346 LRLF ++LTG +AR I + KR Sbjct: 335 LRLFGVILTGSFLARQIIRLSDKR 358 >UniRef50_Q11GX1 Putative ammonia monooxygenase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11GX1_MESSB Length = 369 Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 151/349 (43%), Positives = 212/349 (60%), Gaps = 19/349 (5%) Query: 2 PVLQW--------GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSA 53 P QW G+ CVL LL PAA LLGPM + + + G ++++P Sbjct: 25 PARQWLLLILLSVGLACVLKLL--------QFPAAALLGPMFSAAVLGINGASIRVPSLP 76 Query: 54 FLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTG 113 F+A+Q ++G +IA + ++L LA WP+VL +++ T+L+S+ +GW++ R+ LPG+T Sbjct: 77 FVASQGVIGILIAMAIEPAVLVGLADKWPLVLVVVVSTVLASSFLGWMISRWGILPGSTA 136 Query: 114 AWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHI 173 WGS+PG A AMV MA +GAD RLVAFMQYLRV+ VA A V ++ EA ++ Sbjct: 137 VWGSAPGAATAMVLMAAAFGADQRLVAFMQYLRVMMVA-LAAAVIASIVATGPEAASEGT 195 Query: 174 VWFPPVSINLL-LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLL 232 +WFP + +T+ +A + +G LL LPS L M+ G L G +LP WLL Sbjct: 196 IWFPQLDWPAFPVTVFVAAIGAVLGWLLGLPSPFFLGSMILGVALHLGTGFQFQLPPWLL 255 Query: 233 AMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAY 292 AY IGW IGL F + I ALR LPQI+ SI AL+ C G+A L + + ID ++AY Sbjct: 256 VAAYTFIGWTIGLNFTRTIARHALRALPQIIGSILALMVFCGGLALLLNQILGIDLLSAY 315 Query: 293 LATSPGGLDTVAVIAAGSN-ADMALIMAMQTLRLFSILLTGPAIARFIS 340 LATSPGG+D++A+IAA SN +M+ IM MQ R +LL GPAIAR ++ Sbjct: 316 LATSPGGMDSIAIIAAASNDVNMSFIMTMQMARFLFVLLFGPAIARLVA 364 >UniRef50_C8WDL2 Membrane protein AbrB duplication n=6 Tax=Zymomonas mobilis RepID=C8WDL2_ZYMMN Length = 369 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 135/296 (45%), Positives = 193/296 (65%), Gaps = 4/296 (1%) Query: 42 MRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWL 101 M G T+ +PR F+ +Q ++GCMIA ++ IL + WP+ LA ++ +L S+++GWL Sbjct: 59 MEG-TVAVPRWPFMLSQGVIGCMIAHSMPLPILDAMLRQWPLFLAGVVSVILVSSLLGWL 117 Query: 102 LVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 LV ++ +PG T WGSSPG A M MA+ YGAD+RLVAFMQYLRV+ VA A L+ ++ Sbjct: 118 LVCFNVVPGTTALWGSSPGAALTMTLMAESYGADVRLVAFMQYLRVVCVALIASLIAQIF 177 Query: 162 LGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGT-VGCLLRLPSGTMLIPMLAGAVLQSG 220 +G + V +I+WFPP+ + L L + T R+P+G +L+P+ G VLQ Sbjct: 178 MGHH--PVVSNIIWFPPIHLAAFLKTLAFIAVTTFFAARFRIPAGGILLPLGLGVVLQDA 235 Query: 221 QLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGL 280 TIELP WLLA++Y +GW IGL F + I+ A R ++L SI L+ +C+G+A L Sbjct: 236 GWFTIELPTWLLAISYSLVGWSIGLRFSRSIVRYAARSFFRVLASILTLILLCSGLALVL 295 Query: 281 TRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 + H+DF+TAYLA+SPGG+D+VAV+AA S DM +M MQT+R +LLT P IA Sbjct: 296 AKIAHVDFLTAYLASSPGGVDSVAVVAASSPVDMPFVMGMQTVRFVVVLLTAPTIA 351 Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 55/121 (45%) Query: 224 TIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRF 283 T+ +P W ++ IG I IL LR P L + +++ + + + W L F Sbjct: 62 TVAVPRWPFMLSQGVIGCMIAHSMPLPILDAMLRQWPLFLAGVVSVILVSSLLGWLLVCF 121 Query: 284 MHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 + TA +SPG T+ ++A AD+ L+ MQ LR+ + L IA+ + Sbjct: 122 NVVPGTTALWGSSPGAALTMTLMAESYGADVRLVAFMQYLRVVCVALIASLIAQIFMGHH 181 Query: 344 P 344 P Sbjct: 182 P 182 >UniRef50_B5ZWF3 Membrane protein AbrB duplication n=9 Tax=Alphaproteobacteria RepID=B5ZWF3_RHILW Length = 367 Score = 240 bits (613), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 148/321 (46%), Positives = 202/321 (62%), Gaps = 8/321 (2%) Query: 25 LPAALLLGPMIAGIIFSM---RGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 LPA+LL+GPM A I+ ++ +G L++P Q ++G M+A+ +T IL T+A + Sbjct: 40 LPASLLIGPMAAAILLALTVGKG-KLRIPVWPLQFGQVLVGLMMARTITPDILGTMAKDA 98 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAF 141 P+ L + + + +GWLL R+ LPG T WGSSPGGA+AMV M++ YGAD RLVAF Sbjct: 99 PLFLLFIFSVIAIATGLGWLLTRWQVLPGTTAVWGSSPGGASAMVIMSEAYGADARLVAF 158 Query: 142 MQYLRVLFVAGAAVLVTRMMLG-DNAEAVNQHIVWFPPVS-INLLLTILLAVVAGTVGCL 199 MQYLRV+FVA A +++R+ + D AE ++ FP V TI A + Sbjct: 159 MQYLRVVFVAVGASVISRLWVAADGAE--PPPLILFPEVDWPAFAATIAFAGLCAYGVRR 216 Query: 200 LRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPL 259 LR+ GT+++P+ GA LQ L+ IELP WLLA+AY +GW IGL F + IL R L Sbjct: 217 LRIQGGTIIVPLFLGAFLQGVGLLKIELPMWLLAIAYALVGWSIGLRFTRSILEHVARAL 276 Query: 260 PQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMA 319 P++ I L+A+C MA L F ID +TAYLATSPGG D+VA+IAA S+ D+ +MA Sbjct: 277 PRVSACIVLLMALCGCMAAALHIFAGIDPLTAYLATSPGGADSVAIIAASSDVDVPFVMA 336 Query: 320 MQTLRLFSILLTGPAIARFIS 340 MQT R ILL GP +ARFI+ Sbjct: 337 MQTGRFLIILLIGPTLARFIA 357 >UniRef50_C6HYJ9 Putative ammonia monooxygenase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYJ9_9BACT Length = 388 Score = 227 bits (578), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 147/311 (47%), Positives = 196/311 (63%), Gaps = 5/311 (1%) Query: 34 MIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLL 93 MIA F G ++LPR +AAQ ++G MI Q + I +T WP+ L +L +L Sbjct: 44 MIAAAAFGTSGAGIRLPRPLQIAAQGVVGVMIGQTVNPGIASTFLHTWPVFLGAVLSVVL 103 Query: 94 SSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGA 153 +S ++G +L R LPG T WG SPG A AM+ MA++YG D RLVAFMQY+RV V Sbjct: 104 ASNLLGGILGRMGVLPGTTAVWGLSPGAAQAMMVMAEEYGGDPRLVAFMQYVRVAVVVVT 163 Query: 154 AVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTV-GCLLRLPSGTMLIPM- 211 A LV R+ G + A + WFP +S L L V AG + G L R+P+GT+L P+ Sbjct: 164 ASLVVRVWAGIHLVA-PPPLPWFPALSPGSFLASLGVVAAGILLGRLSRVPAGTILGPLF 222 Query: 212 LAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLA 271 LAGA+ +G L T P W LA AY +G IGLGF ++I ALR LP++LL+IFAL+ Sbjct: 223 LAGALHATGHLAT-PFPRWFLAGAYGLLGVAIGLGFTREIFRHALRALPRVLLAIFALIL 281 Query: 272 ICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG-SNADMALIMAMQTLRLFSILL 330 AG+A L RF+ ID +TAYLATSPGG+D+VAVIAA D+ +MA+QTLR +L+ Sbjct: 282 FAAGVAALLVRFLGIDPLTAYLATSPGGMDSVAVIAASYPRLDVPFVMALQTLRFLFVLV 341 Query: 331 TGPAIARFIST 341 GP++ARF+ T Sbjct: 342 AGPSLARFVVT 352 >UniRef50_A6VSZ2 Putative ammonia monooxygenase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSZ2_MARMS Length = 359 Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 149/335 (44%), Positives = 214/335 (63%), Gaps = 3/335 (0%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQ 67 +L +S +L + F +LPAALLLGPMI II + G ++LP+ FL AQ +LG MIA Sbjct: 23 VLLAVSFVLVVCFEYANLPAALLLGPMITAIILATSGAGMKLPKPMFLMAQGVLGMMIAN 82 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 +L ++ +++ WP+ L + T+++S+ +GWLL R LPG T WGSSPG A+AM Sbjct: 83 SLPLTVFAKISMEWPLFLIGTVSTIVASSFLGWLLSRSGLLPGTTAIWGSSPGAASAMTI 142 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN-LLLT 186 M++ YGAD+RLVAFMQYLRV A AA +V + D A + I W S + +T Sbjct: 143 MSESYGADMRLVAFMQYLRVACCAIAATIVAAIFHVDGVAA--EPIDWLGVSSWSGFGIT 200 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 + + +VA VG LRLPSG +L+ + G V++ ++ I LP W LA+++ +GW IG Sbjct: 201 LSVILVASIVGVKLRLPSGPLLLSLAVGLVIKFSGILPIVLPHWCLAISFAMLGWGIGFR 260 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 F +Q+L A P +L +I AL+AI A +A L F ID +TA+LATSPGG D+VA+I Sbjct: 261 FTRQVLQHAWHVFPHVLAAILALIAINACLAMLLITFADIDPLTAFLATSPGGADSVAII 320 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 AA +NAD++ +MAMQ R +L+ GP +AR++ST Sbjct: 321 AASTNADVSFVMAMQVARFLLVLIAGPMLARWLST 355 >UniRef50_Q4KE96 Ammonia monooxygenase family protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KE96_PSEF5 Length = 356 Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 134/323 (41%), Positives = 206/323 (63%), Gaps = 4/323 (1%) Query: 23 VHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWP 82 + +PA LGPM+ I+F + G ++++PR AF Q +G + A ++T ++LT + +W Sbjct: 35 LEIPAGQFLGPMLTAILFGVCGASIRVPRLAFRLGQGSVGMLAAHSMTLAVLTAMLQSWH 94 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 ++L L+T+ SA+VG +LVR+ ++ +T AWG++PG A+AMV+MA ++GAD R+VA M Sbjct: 95 VMLVATLLTVSLSALVGLVLVRFGAIAASTAAWGTAPGAASAMVSMADEFGADSRVVATM 154 Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLL-- 200 QY+RV+ V LV+ +G A H ++L + L++VA G LL Sbjct: 155 QYVRVVCVVMVGALVSHW-IGAPASGSEAHASQMALHGMSLP-NVGLSIVAIVCGVLLGS 212 Query: 201 RLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLP 260 R+P+G +L+P+L G LQ L+ I LP WLLA AY AIG IGL FD+ L LP Sbjct: 213 RVPAGALLVPLLLGGALQVSGLLQISLPSWLLACAYGAIGGYIGLRFDRPTLSYVFGHLP 272 Query: 261 QILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAM 320 ++ L+A+CA AWGL +M DF++ YLATSPGGLD +A+IA +++D+ L++AM Sbjct: 273 AMIGGALLLIALCALSAWGLALWMGKDFLSFYLATSPGGLDAMAIIAVDTHSDVGLVLAM 332 Query: 321 QTLRLFSILLTGPAIARFISTYA 343 QTLRLF+++++G AR I ++ Sbjct: 333 QTLRLFAVIVSGAFFARLIIKWS 355 >UniRef50_UPI0000383818 COG3180: Putative ammonia monooxygenase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383818 Length = 224 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 102/222 (45%), Positives = 145/222 (65%), Gaps = 5/222 (2%) Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM--LGDNAEAVNQHIVWFPPVSIN 182 MVAMA+DYGAD RLVAFMQY+RV V +A L R++ +G A W + Sbjct: 1 MVAMAEDYGADPRLVAFMQYVRVAAVVLSASLAARLLTDVGGPAGTGPTEASWS---WLG 57 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LL T + + L+RLPS ++ PML GAVL + L+ I LP +L AY IGW Sbjct: 58 LLATAAMTAAGFALAALVRLPSAPLIGPMLLGAVLHASGLLDIVLPAPVLDAAYALIGWY 117 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +GL F ++ L + LP +L++ A++ +CA AWGLT + I+++TA+LATSPGGLD+ Sbjct: 118 VGLRFTRRTLAETVHALPGVLVATAAIIVLCAAWAWGLTGLLPINYLTAFLATSPGGLDS 177 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 VA+IA GS AD++ ++A+QTLRLF +L+TGP +A++I+ AP Sbjct: 178 VAIIAIGSKADVSFVLAVQTLRLFVVLVTGPTLAKWIARAAP 219 >UniRef50_Q3IVJ5 AbrB protein (AidB regulator) n=3 Tax=Rhodobacteraceae RepID=Q3IVJ5_RHOS4 Length = 354 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 116/346 (33%), Positives = 191/346 (55%), Gaps = 4/346 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 LQW +L V L G A+ LPA L++GP+I G IF +RG +++PR A+ AAQ I GC Sbjct: 11 LQWAVLAVGGLAAGQGLQALGLPAGLMVGPLILGAIFGLRGAQVRMPRPAYQAAQGIAGC 70 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 +IA ++ IL P++ +++T L++ G + ++ + WG PG A Sbjct: 71 LIALHIDPGILARAVELGPVLGIFVVLTFLAACATGLIAAAWTGIDREVAIWGFLPGMAG 130 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 ++A++ + G D R+VAF+Q LR++ V + V V ++ G A ++ P + L Sbjct: 131 TVIAISHERGLDSRMVAFIQILRLMMVISSMVGVAMLLAGTGAHPLSGTAA--PGLLSTL 188 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 + A+ L LP+G L+P+ A L + I +P WL+A A++ +G +I Sbjct: 189 RAGGIAALGVAAARWLPALPAGASLVPLTLAAGLSVAG-VNIAMPGWLVAAAFLWLGLQI 247 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 GL F +++ LR LP ++ + L+ CAG L+ +D ++A LAT PG +D++ Sbjct: 248 GLRFTPELMRTGLRALPALVAASLLLILFCAGSGLLLSWIADVDPLSALLATVPGSIDSI 307 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR-FISTYAPKRSA 348 A+IA G+ AD+A +M +QT+RLF++ L GP A F+ P+ A Sbjct: 308 AIIAIGAEADVAFVMTLQTIRLFAVALLGPMAAMLFLRLLRPRPPA 353 >UniRef50_Q09A72 AbrB protein n=2 Tax=Cystobacterineae RepID=Q09A72_STIAU Length = 355 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 111/317 (35%), Positives = 166/317 (52%), Gaps = 11/317 (3%) Query: 24 HLPAALLLGPM----IAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 H+PA LLG M A ++ S + + +PR AQA+LG I +LT TLA Sbjct: 33 HVPAGALLGGMGVSLAAALLLS---VHVPVPRWLMTGAQAVLGTAICASLTSEAWATLAE 89 Query: 80 NWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLV 139 NWP+ L ++ + S V L R++ + T G PGGA+AM A++ + GAD RLV Sbjct: 90 NWPVALINVVGVVGVSQAVALLFSRWTGVDALTATLGLLPGGASAMTALSGEVGADERLV 149 Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI---NLLLTILLAVVAGTV 196 F QYLR+ V AV V+R D + V+ V S+ + ++ L+A+ T Sbjct: 150 TFFQYLRLSIVILVAVGVSRWTGADASLQVSPEAV-LDTSSLPWKDWGVSTLVALGGATA 208 Query: 197 GCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRAL 256 G L+LP+G L P+L G L + L P LL ++ +G R+G F+++ + Sbjct: 209 GIRLKLPAGAFLGPLLVGIPLTALGLPVGAWPMGLLPLSLWTLGTRVGSRFNEEAVRELK 268 Query: 257 RPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMAL 316 R L + AL+ C +AWG + +D +TAY ATSPGG D+V IA G++A + L Sbjct: 269 RVALAALGASSALVGGCVLLAWGWSALGEVDMLTAYFATSPGGADSVLAIALGTHASLTL 328 Query: 317 IMAMQTLRLFSILLTGP 333 ++A+Q RL + L P Sbjct: 329 VLAVQVGRLLFVFLVAP 345 Score = 42.0 bits (97), Expect = 0.033, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 6/146 (4%) Query: 201 RLPSGTMLIPM---LAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALR 257 +P+G +L M LA A+L S + + +P WL+ A +G I + Sbjct: 33 HVPAGALLGGMGVSLAAALLLS---VHVPVPRWLMTGAQAVLGTAICASLTSEAWATLAE 89 Query: 258 PLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALI 317 P L+++ ++ + +A +R+ +D +TA L PGG + ++ AD L+ Sbjct: 90 NWPVALINVVGVVGVSQAVALLFSRWTGVDALTATLGLLPGGASAMTALSGEVGADERLV 149 Query: 318 MAMQTLRLFSILLTGPAIARFISTYA 343 Q LRL ++L ++R+ A Sbjct: 150 TFFQYLRLSIVILVAVGVSRWTGADA 175 >UniRef50_C2AL91 Membrane protein AbrB duplication n=7 Tax=Corynebacterineae RepID=C2AL91_TSUPA Length = 363 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 113/351 (32%), Positives = 171/351 (48%), Gaps = 11/351 (3%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGC 63 +W +LC S L+I + +P+A L ++ I ++ G + +PR A AAQ +LG Sbjct: 10 RWALLCASSCALAICLARLGVPSAPLFAALVCAIAIALAGRSPGDIPRPAQYAAQGVLGA 69 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I + + L WP L I L TLL S G LL + TG+ GGA+ Sbjct: 70 YIGTLMQAHTVAALGTRWPAALLIGLATLLLSVAAGALLGLHRDTDSITGSLALVAGGAS 129 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGA----AVLVTRMMLGDNAEAVNQHIVWFPPV 179 +VA+A++ G D VA +QYLRV+ V + A L + +A W+ Sbjct: 130 GLVAIARELGGDETTVAVVQYLRVILVTVSLPVVAALYPHVAGASSALTSGPGRPWW--- 186 Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQ-SGQLITIELPEWLLAMAYMA 238 +L T V +G L LP+G +L P+L A +G +P L+A Y+ Sbjct: 187 -FDLGFTAACVVAGVVLGRLSHLPAGGLLGPLLISATASLTGIATGATVPWILVAAGYLV 245 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 IGW+ G+GF ++ L R LP + + A+ A CA + + L+ + + YLAT+PG Sbjct: 246 IGWQAGVGFTREALRSLARLLPWATILVIAIGAGCAALGFALSAMTGVPLLDGYLATTPG 305 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR-FISTYAPKRSA 348 G+ V +AA SN D+ I+A Q +R+ ++L PA AR F RSA Sbjct: 306 GIYAVLAVAASSNVDITFIVAAQLIRVMAMLFLAPAAARGFQRWRGTHRSA 356 >UniRef50_C9YG31 Protein abrB n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YG31_9BURK Length = 334 Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 88/219 (40%), Positives = 127/219 (57%), Gaps = 10/219 (4%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P L L + S L S FL + +PA +LLG M+AG++ + + I +Q+P F Q+++ Sbjct: 10 PRLHGPALLLCSALASAAFLLMGVPAGMLLGCMLAGVLLATQDINVQVPAPLFAIGQSVI 69 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 C++A +L +L +A WP+ L I + +SA++G+ L+R LPG+T WG +PG Sbjct: 70 ACLMAHSLHFEVLQRVAGEWPLFLGIAFSVMAASALLGYWLMRSGLLPGSTAIWGLAPGA 129 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN----AEAVNQHIV-WF 176 A+AMV MA D+GAD RLVAFMQYLRV V A LV G + A A + +V W Sbjct: 130 ASAMVLMAGDFGADTRLVAFMQYLRVALVTAIASLVAHFAAGASPGHAAAAWDVQLVHWL 189 Query: 177 ---PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPML 212 P+ L LT++LA A +G L P G +LIPM+ Sbjct: 190 HLQSPLHAGLTLTLVLA--AAWLGRTLTFPGGPLLIPMV 226 >UniRef50_A1T9W3 Putative ammonia monooxygenase n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T9W3_MYCVP Length = 343 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 114/351 (32%), Positives = 173/351 (49%), Gaps = 23/351 (6%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM--RGITLQLPRSAFLAAQAILG 62 +W +L ++ +S F LP LL G + +++++ L+LP S F A QA++G Sbjct: 3 RWLVLILMVAAVSSLFTLARLPTPLLFGGLAGALLYALVRPQAPLRLPDSWFQAGQAVVG 62 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 ++ ++ L L W +V+ + +L+ S +VG LL+R + P T + S GGA Sbjct: 63 VIVGASMDWHSLGALGPRWLVVVGVSCFSLVVSVLVGRLLIRRGASPA-TATFASVAGGA 121 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIV---WFPPV 179 A + AMA D GAD R+VA +QYLR+L V LV ++ G + + W Sbjct: 122 AGLTAMADDLGADARVVAVLQYLRLLVVLVTMPLVVTLVFGAREDGPALGVTGTDW---- 177 Query: 180 SINLLLTILLAVVAGTVGCLLRL------PSGTMLIPMLAGAVLQSGQLIT-IELPEWLL 232 + + VA V C L PS +L P+L A+L +P + Sbjct: 178 ------RVDVPFVAAAVACGLLAGRLLRLPSAAILGPLLVAALLTLVPFFDGAAVPPVVE 231 Query: 233 AMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAY 292 A+ Y+ IG ++GL F L R LP LL+I L CAG+ W LT + AY Sbjct: 232 ALGYLVIGVQVGLKFTAASLRAIGRMLPTALLTIVVTLVACAGLGWVLTVTTDASPLDAY 291 Query: 293 LATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 LAT+PGG+ V IAA ++ D+A + A Q LRL +L + P IA ++ A Sbjct: 292 LATTPGGIYAVLGIAAATDGDVAFVAAAQMLRLLIVLASAPLIAAYLRRAA 342 >UniRef50_A5G1A0 Putative ammonia monooxygenase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G1A0_ACICJ Length = 354 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 144/296 (48%), Gaps = 4/296 (1%) Query: 49 LPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSL 108 +PR A LAAQA+LG +I + S L LA + V+ + +TLL S G L+ + Sbjct: 58 VPRGATLAAQAVLGVVIGALVRASTLRALAAHAVPVVIVTFITLLVSIGAGLLMGLRRDV 117 Query: 109 PGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA 168 TGA + GGA+A+VA+A + GADIR+VA +QYLRV FV LV + Sbjct: 118 DATTGALALTTGGASAVVALAAELGADIRMVAVVQYLRVGFVTATMPLVAAFVFHAAGHP 177 Query: 169 VNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPML-AGAVLQSGQLITIEL 227 L L + A + L R+P+G +L P++ A + +G+ + Sbjct: 178 AAAPRPA---GLAGLALVAIAAPAGLVLARLTRMPAGPLLAPLIVAAGITLTGRTGGASV 234 Query: 228 PEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHID 287 P ++ +AY AIGW+ G+ F + L R LP L I + ICAG+ L Sbjct: 235 PFPIVDLAYAAIGWQAGVRFTRGRLAEIGRALPTALALILLVNVICAGLGVLLAHLAGAS 294 Query: 288 FMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 YLAT PGG+ +A + D+ ++A+ LR+ ++ T P AR + A Sbjct: 295 DFDGYLATLPGGIYAALAMAIAARTDVTFVLAVHVLRVVLVMFTMPLFARLLRRRA 350 >UniRef50_D1VJI4 Membrane protein AbrB duplication n=1 Tax=Frankia sp. EuI1c RepID=D1VJI4_9ACTO Length = 415 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 114/345 (33%), Positives = 173/345 (50%), Gaps = 17/345 (4%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILG 62 L W L + LLS V +PAA LL M+ G ++ G+ + LP A A+Q ++G Sbjct: 57 LGWIALIAICFLLSDLGEHVGIPAAQLLVSMLVGAALALAGVVRRRLPARANRASQVVVG 116 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAI---VGWLLVRYSSLPGNTGAWGSSP 119 ++ L S L+ L ++ VTL S AI V L R + G G P Sbjct: 117 VLMGSYLAPSALSAATGR---ALPLIGVTLASIAICVAVAGALTRRTRATGVDTTLGLMP 173 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ-------H 172 GG+AA+VA A + GAD R VAF QYLRV VA + L+ LG N + + H Sbjct: 174 GGSAAIVAYATELGADSRFVAFAQYLRVGVVAASTPLIV-AALGRNPGSSHSGRSLSFSH 232 Query: 173 IVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPM-LAGAVLQSGQLITIELPEWL 231 +V P L + ++ + LRLP+ +L PM L A+L + L Sbjct: 233 LVASPHQVAGLAMLTATGLLGVGLARRLRLPAPALLGPMFLTAAILWTDLTGGFSPAGSL 292 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 +A++ +G +GL FD + R L +L + A+ CAG+AW L+ + + F + Sbjct: 293 RDIAFVLVGLEVGLRFDLASVRYLGRMLGYLLGASVAVCLACAGLAWALSALVGMSFTDS 352 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSIL-LTGPAI 335 YLAT+PGG++ + AA ++AD+ +I A+Q++RL ++ LT P I Sbjct: 353 YLATTPGGINAILATAASAHADLPVIAAVQSVRLLLVIALTAPII 397 >UniRef50_C4LH35 Putative membrane protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LH35_CORK4 Length = 364 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 99/328 (30%), Positives = 162/328 (49%), Gaps = 10/328 (3%) Query: 9 LCVLSLLLSIGFLAV-HLPAALLLGPMIAG----IIFSMRGITLQLPRSAFLAAQAILGC 63 + +++ L+++G V LP+ L+LG M+ G II S R ++ PRS +Q ++ Sbjct: 19 IAIIATLVAVGLCRVAQLPSPLMLGAMVGGLCGAIIASTR---IRPPRSTIGPSQGVISL 75 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + A L S LA L + +TLL A W + R+S++ T + GGA+ Sbjct: 76 IAAGPLVNSSPDRLASYALPSLIAIGITLLLCAACAWAITRFSTIDSPTAVMSTLAGGAS 135 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI-N 182 AM ++++ GAD R V QYLRV V+ + + +++G + + ++ +V SI N Sbjct: 136 AMSVLSEELGADFRYVTVAQYLRVFIVSFSLPFLIPLLVGGDVDVGSEPLVNLSSHSIMN 195 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L+ + + + G + LP+ +L P+ V+ Q I +P L A A++ IGW+ Sbjct: 196 WLVVLAVITIPGWLASFTPLPAPRLLAPLAIAIVIGEWQPHLISIPGVLEAAAFVLIGWQ 255 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 G FD+Q L+ + LP L I L+ C MA LT YLAT+PGG Sbjct: 256 AGGAFDRQSLVTNAKRLPLAFLCIIVLMGGCGVMAGILTALGLGTLTETYLATTPGGRYI 315 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILL 330 V IA +A ++ MQ R+ +L+ Sbjct: 316 VLAIAHDRDAG-PIVTVMQVTRMIVMLI 342 >UniRef50_D2S6B3 Membrane protein AbrB duplication n=2 Tax=Actinomycetales RepID=D2S6B3_9ACTO Length = 355 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 111/324 (34%), Positives = 167/324 (51%), Gaps = 13/324 (4%) Query: 24 HLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNW- 81 LP+ L G ++AG++ + G L +PR A AAQ ++G I + L + +W Sbjct: 31 DLPSPSLFGGLVAGLVRGLAGRRRLAVPRPATTAAQGLIGVSIGALVDLDTLEAIGRDWL 90 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAF 141 P++L + LLS + ++ P TGA+ GGA+ + AM+++ GAD R+VA Sbjct: 91 PVLLVTVGTLLLSVLAGLLMRLQPGVSP-VTGAFAMVAGGASGITAMSRELGADERMVAV 149 Query: 142 MQYLRVLFVAG----AAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGT-V 196 +QYLRVL + AAV + G V+ +P LL + ++AGT + Sbjct: 150 LQYLRVLLIVVLMPVAAVALFGAEPGSGGTTVDDAGPGWP----AGLLFAAVCLLAGTPL 205 Query: 197 GCLLRLPSGTMLIPMLAGAVLQSGQLITI-ELPEWLLAMAYMAIGWRIGLGFDKQILLRA 255 LLR+P T+L P+L A L G L ++P L A++ IG +GL FD+ L Sbjct: 206 ARLLRIPVPTLLGPLLVAAGLDLGGLSGGADVPAPLGTAAFLVIGLVVGLNFDRDSLRTV 265 Query: 256 LRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMA 315 R +P L I L+A CAG+ L + AYLAT+PGGL V A AD Sbjct: 266 GRAMPLALAVILGLVAACAGLGAVLAATTGASALDAYLATTPGGLYAVLATAQDGGADAT 325 Query: 316 LIMAMQTLRLFSILLTGPAIARFI 339 ++A+Q LRLF +LL+ P +AR++ Sbjct: 326 FVLAVQVLRLFVMLLSAPLLARWL 349 >UniRef50_Q0S615 Possible ammonia monooxygenase n=2 Tax=Rhodococcus RepID=Q0S615_RHOSR Length = 369 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 111/352 (31%), Positives = 172/352 (48%), Gaps = 14/352 (3%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILG 62 L+W L LS+ + +V L AA L +I ++ G ++PR AQ +L Sbjct: 20 LRWAALIALSVGGWVLGESVGLTAAGLFSALIVAATLAVTGWGPARVPRPLGKLAQGVLA 79 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + + + L W V++I TL S G LL + + TG+ + GGA Sbjct: 80 SAVGLMVHRDTIAGLGSMWMPVVSIAAATLALSVAAGALLALHRDVDAVTGSLAMTAGGA 139 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRV-LFVAGAAVLVTRMMLGDN-AEAVNQH----IVWF 176 +VAMA++ G D R+VA +QYLRV L V ++VT D AE V W+ Sbjct: 140 TGLVAMARELGGDDRVVAVVQYLRVALVVVSMPMIVTFGFRADTGAETVTGTEGGGSEWY 199 Query: 177 PPVSINLLLTILLAVVAGT-VGCLLRLPSGTMLIPMLAGAVLQ-SGQLITIELPEWLLAM 234 V++ L L +V GT V L+RLP+ L P+ A + G + +P L+ Sbjct: 200 --VALPFLA---LFIVGGTAVASLVRLPAPATLGPLAVSAGFELGGWSDAVAVPPMLMTG 254 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 A + IGW+ GL FD+ L R LP L + A CAG+ L+ + + AYLA Sbjct: 255 ALILIGWQAGLAFDRASLRAIGRILPYAALLTLLVGAACAGLGVLLSHLTGVSLLEAYLA 314 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 T+PGGL V ++A + +++ + A Q LRL +L+T P +A+ + ++ +R Sbjct: 315 TTPGGLAAVLAVSASTASNVTFVAAAQVLRLVIMLVTTPIMAKAFAHFSSRR 366 >UniRef50_B7KIK2 Membrane protein AbrB duplication n=3 Tax=Cyanobacteria RepID=B7KIK2_CYAP7 Length = 389 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 102/340 (30%), Positives = 169/340 (49%), Gaps = 15/340 (4%) Query: 20 FLAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILGCMIAQNLT-GSILTTL 77 F + +P LLGPM+AGI ++ ++G L + L Q I+G + A + ++L Sbjct: 51 FSGLQVPVGWLLGPMLAGIGYAVIKGSRQPLSPTFKLVGQIIVGLVTASRFSPETLLIAK 110 Query: 78 AVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIR 137 + P++L ++ LS G+LL R++ + TG G PG A+++VAM+++ GAD Sbjct: 111 SYFIPLILCVVTTGCLS-MFNGYLLSRWAGIDRATGFLGFIPGAASSIVAMSEEMGADAI 169 Query: 138 LVAFMQYLRVLFV-----AGAAVLVTRMMLGDNAEAVN-QHIVWFPPVSINLLLTILLAV 191 VA +QY+RVL V A A +L + V H + P+ INLL+ Sbjct: 170 AVALIQYIRVLLVVLILPATATILFPVNIDPQTPVTVGITHNLPTLPIVINLLIIAGCGG 229 Query: 192 VAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFD--- 248 + +G LLR PS L P + G ++ IE+P +L ++ + +G IG+ FD Sbjct: 230 LGIWLGKLLRFPSAGFLGPFVVGLIVFWLLPYQIEIPRFLFSVGLLLLGISIGVQFDWTV 289 Query: 249 KQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAA 308 + LL+A+ L ++ L I L IC G+ + +D +TA L +PGG++ + Sbjct: 290 ARTLLKAV--LIEVGLVI-VLSLICLGIGYEFHVVTGVDTVTAILGFTPGGIEAMIATVM 346 Query: 309 GSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 D L++AMQ R+ I+L P + F++ A Sbjct: 347 QLGGDTGLVLAMQLTRMLGIILIAPWLVSFLAKRAKNSDK 386 >UniRef50_D0L4U6 Membrane protein AbrB duplication n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L4U6_GORB4 Length = 375 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 95/295 (32%), Positives = 143/295 (48%), Gaps = 1/295 (0%) Query: 49 LPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSL 108 +PR LAAQ +LG I L+ L W VL I + TL S G LL + + Sbjct: 71 IPRGYVLAAQGVLGVYIGTIADSDTLSGLGSAWFPVLVIGVATLGLSVAGGALLGLHKQV 130 Query: 109 PGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA 168 TG+ GGA+ +V + ++ G D R+VA +QYLRV V + L ++ G ++ A Sbjct: 131 DPLTGSLALVAGGASGLVVVTRELGGDERMVAVIQYLRVALVTLSIPLFASLVFGQSSAA 190 Query: 169 VNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQ-SGQLITIEL 227 V + + L+L + V VG LL +P+G +L+PM V + +G E+ Sbjct: 191 VTETTPSWADQGWGLVLMAVCMGVGIPVGRLLHVPAGALLVPMALATVAELTGIAGDAEV 250 Query: 228 PEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHID 287 LL + Y IGW+ GLGF L R LP L+ I A+ CA + L+ + Sbjct: 251 SPILLTLGYAVIGWQAGLGFTLPRLRAIGRVLPFALVLILAIGVGCALLGVALSAWTGES 310 Query: 288 FMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 YLAT+PGG+ V A + ++A ++A Q LR+ +L P AR + + Sbjct: 311 MYDCYLATTPGGIYAVLAAATAAGGNVAFVVAAQILRVLLMLFVAPFAARVAARH 365 >UniRef50_C2AKB5 Membrane protein AbrB duplication n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AKB5_TSUPA Length = 402 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 149/303 (49%), Gaps = 14/303 (4%) Query: 44 GITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLS---SAIVGW 100 G + +P A QA +G M+ L + T+ P++ LL+++L+ S W Sbjct: 83 GREISVPADASKWTQAFIGVMLGSYLNLEAIRTVG---PVIAPFLLISVLTIVLSMFTAW 139 Query: 101 LLVR-YSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTR 159 L R ++L T G GG++A+V + + GA +V MQY RVL V+ A V Sbjct: 140 ALSRAVTALDQRTATLGLMVGGSSAVVTLCDELGARKDVVGVMQYSRVLLVSLTAPFVMT 199 Query: 160 MMLGDNAEAVNQHIVWFPPVS-----INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAG 214 + G A Q + V L + I+ A+V +G LRLP G ++ PML Sbjct: 200 ALAGTAAATSRQRVTDLQIVGRGDQIAGLSIAIVFAIVGMWLGRKLRLPGGGLIGPMLVA 259 Query: 215 AVLQSGQLITIELPEW-LLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAIC 273 AV+ QL P+ + + +G +GL FD+++L R LP I + I L + Sbjct: 260 AVIGGAQLTRGFAPQGAFKELLLIVVGLEVGLMFDRRMLRRLAHLLPAIGVGILFLCGVV 319 Query: 274 AGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGS-NADMALIMAMQTLRLFSILLTG 332 A +A R + AYLAT+PGG++ V AAGS +A+MALI +Q+LRL ++L Sbjct: 320 ALLAAAAARITGVPLADAYLATTPGGINAVVASAAGSGDANMALIATVQSLRLIIVVLAL 379 Query: 333 PAI 335 P I Sbjct: 380 PLI 382 >UniRef50_B4AWS0 Membrane protein AbrB duplication n=3 Tax=Cyanobacteria RepID=B4AWS0_9CHRO Length = 400 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 93/337 (27%), Positives = 160/337 (47%), Gaps = 18/337 (5%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWP 82 +P LLGPM+AGI ++++ + Q LP L AQ I+G + A + L T+ + Sbjct: 55 KIPVGWLLGPMLAGIAYAIKQGSRQPLPPYFKLIAQIIIGMVTASRFS---LETVMIAKT 111 Query: 83 IVLAILLVTLLS---SAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLV 139 + +LL + S G+LL R++ + TG G PG A+++VAM+++ GAD V Sbjct: 112 YFIPLLLCVCATGGLSMFNGYLLSRWAGIDQATGFLGFIPGAASSIVAMSEEMGADAIAV 171 Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFP------PVSINLLLTILLAVVA 193 A +QY+RVL V + EA V P+ +NLL+ + + Sbjct: 172 ALIQYIRVLLVVLLLPATATFLFPVQLEAQTAANVAATTDLSTLPLYLNLLIVAICGGLG 231 Query: 194 GTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILL 253 +G L+ PS L P G ++ +IE+P + + +G IG+ FD ++ Sbjct: 232 IWLGKRLKFPSAGFLGPFFVGLIVFWLLPYSIEIPRSVFNGGLLLLGISIGVQFDWEVAR 291 Query: 254 RALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 + L+ + + + L IC G+ + ++ TA L +PGG++ + D Sbjct: 292 KLLKAVYIEIALVCVLSLICLGIGYEFHVLTGVETSTAILGFTPGGIEAMIATVMQLGGD 351 Query: 314 MALIMAMQTLRLFSILLTGPAIARFI-----STYAPK 345 L++AMQ R+ I+L P + F+ S++AP+ Sbjct: 352 TGLVLAMQLTRMLGIILIAPWLVGFLAKRVKSSHAPE 388 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 77/162 (47%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 P + ++ +++A++AG V L++P G +L PMLAG Q LP + +A + Sbjct: 32 PKTQKIIGQLVIALLAGWVCSWLKIPVGWLLGPMLAGIAYAIKQGSRQPLPPYFKLIAQI 91 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 IG F + ++ A +LL + A + + L+R+ ID T +L P Sbjct: 92 IIGMVTASRFSLETVMIAKTYFIPLLLCVCATGGLSMFNGYLLSRWAGIDQATGFLGFIP 151 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 G ++ ++ AD + +Q +R+ ++L PA A F+ Sbjct: 152 GAASSIVAMSEEMGADAIAVALIQYIRVLLVVLLLPATATFL 193 >UniRef50_C0VV00 Ammonia monooxygenase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VV00_9CORY Length = 354 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 96/350 (27%), Positives = 170/350 (48%), Gaps = 19/350 (5%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILG 62 ++W ++ LS+LL +PAA ++GP++ ++ L L R F ++ +G Sbjct: 8 VRWLVVAPLSVLLGYVLSRASVPAAWIIGPLVVSAACALLTKKELPLNRYLFRFSRGTIG 67 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSS------AIVGWLLV--RYSSLPGNTGA 114 + A L + V W + LL L ++ AI+G ++ + + +G Sbjct: 68 ILAALPL-------VTVGWREFVTYLLPGLFTATFTILLAIIGGTIMGKTHKQIGLESGI 120 Query: 115 WGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIV 174 GGA+ M +A++ GAD R VA QYLR+L V+ + LV ++ + Sbjct: 121 MSMLAGGASVMPIIAKEVGADYRYVALNQYLRLLTVSVSLPLVAGWLMTTESAPAGHPAP 180 Query: 175 WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIEL--PEWLL 232 P + L + I +A+ A +V L +PS +++ P+L ++ S ++ L PE + Sbjct: 181 PEPAGWVGLAIIIAVAMGAESVARFLHIPSPSIIGPILVMIIVASAIPDSVSLYPPEVMR 240 Query: 233 AMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAY 292 +A++ +GW G L LP L + L+ CA +AW LT ++ I + AY Sbjct: 241 IIAFLVVGWMCGGSLSLTSLKTFSALLPITLTFVGVLIGACALIAWPLTEWLDITYFEAY 300 Query: 293 LATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 LAT+PG LDTV + + S + A+++ MQ +RL I++ + +F+ Y Sbjct: 301 LATTPGALDTVLALTSESGSG-AVVVTMQVIRLLCIVVFAGYLPQFLRLY 349 >UniRef50_UPI0001C32335 membrane protein AbrB duplication n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32335 Length = 358 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 109/340 (32%), Positives = 170/340 (50%), Gaps = 6/340 (1%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCM 64 W L +LL++ A+ LP+A L G ++ G+ ++R +L F +AQA+ G Sbjct: 7 WLALGAATLLVAWALDALGLPSATLFGALVVGLAVALRLPGRFRLGEGTFRSAQALTGVT 66 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + + L LA W V + TLL + G ++ R + + T A G GGA+ Sbjct: 67 LGCYMQSESLDALAGAWLPVALVSAATLLLCLLAGHVMARVTDVDEPTAALGMVAGGASG 126 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI--- 181 +V MA++ GAD R+VAFMQY RVL + A L+ + + A + Sbjct: 127 IVTMARELGADDRIVAFMQYARVLLIVLATPLLVALFFPGHHGAPGIGDGGGDGPFLGTA 186 Query: 182 -NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLI-TIELPEWLLAMAYMAI 239 + T+ +A+ G L+RLP+G +L P+L A L + +P L A+ AI Sbjct: 187 GDWAATVAIALAGAAAGRLVRLPAGVLLGPLLLAAGLTLALPDGSFAVPPLLREAAFAAI 246 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G ++GL F + + R R L ++LS+ AL+ C G+A L H+ + AYLAT+PGG Sbjct: 247 GLQVGLRFTVETIRRLGRLLVPVVLSVVALVVACFGLAVVLHATTHVTLLDAYLATTPGG 306 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 L V A G+ AD ++A+Q LRL ++L P R + Sbjct: 307 LYVVLAAAVGTGADTTFVVAVQGLRLLVMVLLAPFAVRLL 346 >UniRef50_C0XTR9 Ammonia monooxygenase n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XTR9_9CORY Length = 355 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 106/349 (30%), Positives = 167/349 (47%), Gaps = 27/349 (7%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIA-GIIFSMRGITLQLPRSAFLAAQAILG 62 L+W ++ S+ L + +P A +LG ++A G + G L + AA+ I+G Sbjct: 11 LRWLIVAPASVALGFVLSRLGVPVAWILGAILASGAMALASGRDLPVDPRILSAARGIIG 70 Query: 63 CMIAQNLTG----SILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSS 118 + A +L +L LA +++A++ V L A G L + + TG Sbjct: 71 VIAALSLANVPPRELLGYLAPG--VMVAVVTVGL---AFAGGLFLAKHGVSRETGILSLL 125 Query: 119 PGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML--GDNAEAVNQHIVWF 176 GGA+ M A+A+D G D R VA QYLR+L V+ LV + G A W Sbjct: 126 AGGASMMPAIAEDVGGDPRYVALSQYLRLLAVSVTLPLVAAFLTAPGGTGHAPEASAWW- 184 Query: 177 PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 + LL+ L+AV +G LL +P+ + P+ AV+ S + P + +A+ Sbjct: 185 ----VWLLIPALVAV-GQPLGTLLHMPNSKVFGPLTLTAVVASLIDAPLTPPPAITIVAF 239 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 +AIGW G G + L R LP + I AL+ CA + W ++ ++ I + YLATS Sbjct: 240 LAIGWLCGGGLNVAALRLFARLLPVTVTYIVALMGACAAVGWVVSAWLDITYYEGYLATS 299 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 PG ++TV ++A A A+I A+Q +RL +LL + Y PK Sbjct: 300 PGAIETVLALSAEGGAGPAVI-AIQLIRLCGVLL--------FAAYLPK 339 >UniRef50_C2BYG7 Possible ammonia monooxygenase n=1 Tax=Listeria grayi DSM 20601 RepID=C2BYG7_LISGR Length = 365 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 87/327 (26%), Positives = 151/327 (46%), Gaps = 14/327 (4%) Query: 23 VHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 +HLP LLGPM I I+ I L P LAA I+G +T + + Sbjct: 33 IHLPIPWLLGPMLIITILNQFDKIPLHFPAILRLAALMIVGYTAGTKITLATFKLIISQL 92 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGA-DIRLVA 140 PI++ +V +L + + + ++++L + GS PGGA M+ A++ D +V+ Sbjct: 93 PIMVITTIVLILIGILFSYFISKWTTLDYQSLVAGSMPGGATQMILYAREQKHLDPTIVS 152 Query: 141 FMQYLRV--LFVAGAAVLVTRMM-LGDNAEAVNQH-------IVWFPPVSINLLLTILLA 190 Q R+ +F+ +L T ++ ++AV H + FP SI L ++ Sbjct: 153 IFQIFRLVTIFLFVPIILYTPLIGAHHQSQAVATHNAASDYFLSQFPWASI--LFFLIAV 210 Query: 191 VVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQ 250 +V +G LRLP +L P+L +L + +P ++ +A+G GLG + + Sbjct: 211 LVFSDLGRFLRLPIHQLLGPLLGIGILNIFGIHGFNVPHGIIGATQLALGIYFGLGINLK 270 Query: 251 ILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGS 310 ++S LL G++ L + H T YLA PGG+D +++IA Sbjct: 271 GNANKATLFISAIISNIVLLFCMVGISLLLNQLFHYGETTTYLAIVPGGMDQISLIATTI 330 Query: 311 NADMALIMAMQTLRLFSILLTGPAIAR 337 +A++ L++ QT R S+ L P + + Sbjct: 331 SANVGLVVGYQTFRSISVNLIAPFVFK 357 >UniRef50_C9S1X9 Membrane protein AbrB duplication n=5 Tax=Geobacillus RepID=C9S1X9_GEOSY Length = 384 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 76/289 (26%), Positives = 146/289 (50%), Gaps = 20/289 (6%) Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G + ++T L + P++L ++ LL S +V L+ R++ +P + GS PG Sbjct: 71 IGYTLGTSMTAGTLVEMGRQLPVMLLATVLILLFSFLVSCLVARWTRIPLRSVVTGSIPG 130 Query: 121 GAAAMVAMAQDY-GADIRLVAFMQYLRVLFVAGAAVLVTRMML----------GDNAEAV 169 G + M+ + ++ G D +V F Q +R++ G LV ++L G AE+ Sbjct: 131 GLSQMLVLGEELDGVDATIVTFFQVMRLM---GVVFLVPLIVLSPFFSGGAEAGTGAES- 186 Query: 170 NQHIVWFPPVSINLL-LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELP 228 Q W S+ L+ L +++ V + +G ++LP+ +L P++ + L LP Sbjct: 187 GQEAHW----SVGLVWLYVIVTVASAIIGRRIKLPTAYLLGPIIGTSALVMAGTPAPHLP 242 Query: 229 EWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDF 288 LL +A +A+G +GL + R + + + AL+ A+ LT + + Sbjct: 243 APLLDIAQIAMGAYLGLMLKPARIAEKGRAVLAAVATGLALILFSMASAFVLTVLHGVPY 302 Query: 289 MTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 +TA++A +PGG+D + ++A ++AD+A++ + Q R+F ILL P + + Sbjct: 303 LTAFIALAPGGMDQMGILAREAHADLAVVTSYQMFRIFFILLVVPPVLK 351 >UniRef50_C6CTI7 Membrane protein AbrB duplication n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTI7_PAESJ Length = 370 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 95/338 (28%), Positives = 162/338 (47%), Gaps = 27/338 (7%) Query: 20 FLAVHLPAALLLGPMIAGIIFSM--RGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTL 77 F ++ P LLGPMIA +I + +G + P + I+G I ++TG+ L + Sbjct: 28 FHLLNTPIPWLLGPMIAVLIGTNVWKG-KYRWPGQIRNSGMIIVGYTIGLSMTGTALKEM 86 Query: 78 AVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQD-YGADI 136 P + + ++ LL + +++ + S T GS PGG + ++A+A++ G ++ Sbjct: 87 GEQLPTMCLMTVILLLLCGGIAFVVSKLSDTDFKTALLGSVPGGLSQVLALAEETKGVNL 146 Query: 137 RLVAFMQYLRVLF-VAGAAVLVTRMMLGDNAEA-------VNQHIVW---FPPVSINLLL 185 +V Q +R++ V G +LV + G +A V +H W FP N+L+ Sbjct: 147 TVVTVTQVVRLMIIVIGIPLLVFSPIFGQVHDAAAAAMPIVAKHDNWAALFP----NILI 202 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 + V+ G ++ P+ +L P +A AVLQ L LP L + A + IG +GL Sbjct: 203 FAPVCVICAIAGNRIKFPTAFLLGPAIATAVLQGIGLHGPSLPSTLTSAAQLMIGTYVGL 262 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFM---H-IDFMTAYLATSPGGLD 301 L R +R + S L+ +CA WGL+ M H + TA L+ +PGG+D Sbjct: 263 LLKPGKLRRKVRTFSFAIGSGLVLM-LCA---WGLSELMTLLHPVSRSTALLSLAPGGMD 318 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + ++A NAD++++ Q R F I P + R + Sbjct: 319 QMGILAHEINADLSMVSGYQLFRTFFIFFAVPPLLRLL 356 >UniRef50_A8IB98 Putative ammonia monooxygenase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IB98_AZOC5 Length = 366 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 79/320 (24%), Positives = 145/320 (45%), Gaps = 2/320 (0%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 F + P ++GP+I + G+ L+ + +LG + T + Sbjct: 29 FAWIRTPLPWIIGPIICCGFATFLGLPLKASSEGRIVGMLVLGVALGLYFTPEAAIAVLA 88 Query: 80 NWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLV 139 + P+++A TL+ A +LL R + + T + S PGG A M + + +G + Sbjct: 89 HLPVIIAASGTTLVVGAAASFLLARTARIDHVTAFFCSVPGGVAEMSMVGERFGGRPMPI 148 Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCL 199 A Q LRV+ V + T +LG + + + P L +++ LA + Sbjct: 149 AVTQLLRVVSVT-ILIPTTLTLLGAGGSSTSA-LGALPFSPTGLAVSLCLAFAFSALLAR 206 Query: 200 LRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPL 259 R + +L PM G VL + +P WL A+ + +G IG FD+ ++ R + Sbjct: 207 FRFRNAWLLGPMAVGCVLGLSEAGLSSVPPWLTAVGQVLMGAHIGAQFDRALITSMWRFI 266 Query: 260 PQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMA 319 P L+++ L+A CAG+ + I LATSPGG+ + + A + D+ +++A Sbjct: 267 PAALINLGVLMAGCAGVGVLVAYVSGISPGNMVLATSPGGVTEMCITAKVLHLDVPIVVA 326 Query: 320 MQTLRLFSILLTGPAIARFI 339 +R+F ++L+ P + R + Sbjct: 327 FHIVRIFLVILSAPYLFRLL 346 >UniRef50_B1HT63 Protein abrB (AidB regulator) n=2 Tax=Bacillaceae RepID=B1HT63_LYSSC Length = 314 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 73/239 (30%), Positives = 119/239 (49%), Gaps = 22/239 (9%) Query: 98 VGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGA-DIRLVAFMQYLRVLFVAGAAVL 156 V +L+ + + L T PGG A +VA A++ G D+ ++ F Q LRVL + G L Sbjct: 73 VSYLVAKRTDLDFATALTCCVPGGMAQVVAFAEEQGDMDMVVITFFQILRVLLIVGFVPL 132 Query: 157 VTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAV 216 + +G N+ N W L+ +++ +AG + L++P+G ML P+ + Sbjct: 133 MLTD-VGGNSTMSNGMYTW------GLVGILIVCGLAGWIAQKLKIPTGYMLGPVF---L 182 Query: 217 LQSGQLITIELPE---WLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAIC 273 L ++ IE+P LL +A + +G IGL K+ L + R + F I Sbjct: 183 LMGINMVGIEVPRIPVSLLHIAQLMVGIHIGLLLKKEDLHLSKRHI----FYAFVSAGIY 238 Query: 274 AGMAWGLTRFMH----IDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSI 328 G A+GLT M +DF T +L+ PGGLD + +IAA +A++ ++ A Q R+ I Sbjct: 239 IGAAYGLTFLMKSLYSLDFRTGFLSIVPGGLDQMGIIAASVHANVTIVTAFQLFRILVI 297 >UniRef50_A8LC15 Putative ammonia monooxygenase n=1 Tax=Frankia sp. EAN1pec RepID=A8LC15_FRASN Length = 358 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 17/333 (5%) Query: 23 VHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 VH P+ LLG +I G FS+ G + P A A++G + ++ +A Sbjct: 30 VHSPSPYLLGGLIGGAAFSLAFGAPWRFPEPARHFGMALIGVSAGALIDSDVIRRIASQP 89 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAF 141 VL + VTL+ S G +LV + T + S G A+ + AMA++ AD +V+ Sbjct: 90 VEVLGGVAVTLVFSMATGLVLVLSPKVNLATAVFSSMAGAASGVSAMAKELDADDAIVSA 149 Query: 142 MQYLRVLFVAGA----AVLVTR---MMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAG 194 +QY RV+ V + A ++ R + D A + ++W +L+ T L V Sbjct: 150 VQYARVVVVVVSLSLVAPILDRSGSLSPADRGPAAVEPVLWQ-----SLVFTALCMGVGL 204 Query: 195 TVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 + +L +++PML + + + +PE LL + Y G +G F + Sbjct: 205 LLAQVLSFSGSRLVVPMLLSMAVALVVSVPLAVPEPLLDLGYTITGLAVGFSFTAATIRL 264 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 +R P +L+ + + CA + R + I + YLA +PGGL V +A S A++ Sbjct: 265 LIRLFPLVLVQLVLSVGGCAVIGIVFARAVGIPDLAGYLAMTPGGLPAVTAVAVQSGAEV 324 Query: 315 ALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 L++ MQ +R+F+ +L+ A I T +RS Sbjct: 325 GLVITMQLVRVFAAILS----ASLIGTLVRRRS 353 >UniRef50_C8NRG7 Transport protein n=13 Tax=Corynebacterium RepID=C8NRG7_COREF Length = 353 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 154/313 (49%), Gaps = 26/313 (8%) Query: 20 FLAVHLPAA-LLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTG----SIL 74 F V++PA+ +L G ++AG + G L L R + ++I+ + A L +L Sbjct: 14 FTLVNIPASWILAGIIVAGACALVTGEDLPLTRGVHIFGRSIIAVLAALPLISAPGQELL 73 Query: 75 TTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSS---LPGNTGAWGSSPGGAAAMVAMAQD 131 LA +V++ VT+ I+G LL+ S LP TG GGA+ M +A+D Sbjct: 74 RYLAPG--LVISFFTVTV---GIIGGLLLSRSRPEILP-ETGVLSMLAGGASVMPVLAKD 127 Query: 132 YGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNA---EAVNQHIVWF-------PPVSI 181 GAD R VA QYLR+L V+ + LVT A + + F + Sbjct: 128 LGADFRYVALSQYLRLLVVSVSLPLVTTFFAPYGAGSDQGTESPLAVFGLGEFGTSTSVV 187 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQ--SGQLITIELPEWLLAMAYMAI 239 +L + L+ +V +G LLRLPS +L P++ L + +E P +A++AI Sbjct: 188 SLAVLGLIILVGEPLGRLLRLPSPAILGPLVLTVTLSLVFPLEVNLEPPSLFKILAFLAI 247 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 GW G G + L R LP +L I ALLA+CA A L ++ I + AYLATSPG Sbjct: 248 GWMCGGGLNMTALKAFSRQLPATILFIVALLAVCAAAAVLLVFWLDISYFEAYLATSPGA 307 Query: 300 LDTVAVIAAGSNA 312 L+TV +++ +A Sbjct: 308 LETVLALSSEGDA 320 >UniRef50_C6JLU4 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JLU4_FUSVA Length = 357 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 83/346 (23%), Positives = 161/346 (46%), Gaps = 31/346 (8%) Query: 21 LAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLT-GSILTTLAV 79 L +PA ++G + A IFS+ LP+S + AQ G I + I+ V Sbjct: 18 LKYKVPAGAMIGSLFAVAIFSVVTGKAYLPQSYKIIAQISTGAFIGARIKYNDIIELKKV 77 Query: 80 NWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLV 139 P + ++L+ L++ ++G+ L S + T + ++PGG M +A D+GAD V Sbjct: 78 FKPAAIMVILMALIN-FVMGYFLYSSSDIDMKTALFCTAPGGIMDMTLIAYDFGADTSKV 136 Query: 140 AFMQYLRVL---------------FVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL- 183 A MQ +R++ + + L + E +++ P +L Sbjct: 137 AVMQMMRLISVMCLIPWLIKGVIKYYKSKSPAEETENLKSSKETISEKKKEKIPFMEDLK 196 Query: 184 --LLTILLAVVAGTVGCLLRLPSGTMLIPM--LAGAVLQSGQ-LITIELPEWLLAMAYMA 238 ++T+ + V++G G + +P+G M + M +A ++S + + I+L +++ + Sbjct: 197 KIIITMTIGVISGFAGYYVGIPAGAMSVSMAGVAAYNIKSNKAFMPIKLRQFIQVLGGAL 256 Query: 239 IGWRIGLGFDKQILLRALRPLPQIL-LSIFALLAICAG-MAWGLTRFMHIDFMTAYLATS 296 IG ++ +G IL +P I+ +S F L+ + G M + ++ F + T+ + + Sbjct: 257 IGAKMTMG---DILGMKTIAIPVIIVISGFCLMNLILGIMVYKISDF---NIPTSMFSAA 310 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 PGG+ +A+IA AD + MQ +RL ++ P + + I Y Sbjct: 311 PGGISDIAIIAGELGADTPKVAVMQFIRLVCVIAFYPILIKIIVQY 356 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 9/169 (5%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQ--SGQLITIELPEWLLAMAYMAIG 240 +T + ++ + ++P+G M+ + A A+ +G+ LP+ +A ++ G Sbjct: 3 FFITFFVGLIGAGIALKYKVPAGAMIGSLFAVAIFSVVTGKA---YLPQSYKIIAQISTG 59 Query: 241 WRIG--LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 IG + ++ I L+ + I++ + AL+ M + L ID TA T+PG Sbjct: 60 AFIGARIKYNDIIELKKVFKPAAIMVILMALINFV--MGYFLYSSSDIDMKTALFCTAPG 117 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 G+ + +IA AD + + MQ +RL S++ P + + + Y +S Sbjct: 118 GIMDMTLIAYDFGADTSKVAVMQMMRLISVMCLIPWLIKGVIKYYKSKS 166 >UniRef50_UPI0001AF51FB hypothetical protein MkanA1_02057 n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF51FB Length = 411 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 95/312 (30%), Positives = 144/312 (46%), Gaps = 11/312 (3%) Query: 20 FLAVHLPAALLLGPMI-AGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLA 78 F A H+P L+ + AG + + G + AQ +G +A L+G TT+A Sbjct: 25 FSAFHMPIGWLIAALAGAGCMAVLAGREFVPHKFLLRPAQGCIGMAVAVPLSGLASTTIA 84 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLVRYS-SLPGNTGAWGSSPGGAAAMVAMAQDYGADIR 137 I TL+ + G +L R + +L T + GGA+ + MA + D R Sbjct: 85 GYLGISAVCSAATLILCLVCGLVLTRAAKTLSPATALLSTLAGGASGICTMAPELRVDHR 144 Query: 138 LVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVG 197 VA QYLRV+ VA LV + + A A H ++ + I++ V AG G Sbjct: 145 YVALSQYLRVVVVALTVPLVLQCV---GAPAARSHPAGSHVTLVSSVAAIVVIVAAGYAG 201 Query: 198 CLLRLPSGTMLIPMLAGAVLQ---SGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 + P+ ++ PML V Q GQ + + LP L A+AY+ IGW+ G L + Sbjct: 202 LKWKWPAPFLIAPMLVALVTQLPGPGQFV-LALPPALNAVAYVVIGWQAGGAVTLGALRQ 260 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 LR LP I +A C + + ++ + + F AYLAT+PGG+ +AA +A Sbjct: 261 CLRLLPLTCAFIGVAVAGCLVLTFVVSAWTGVSFAQAYLATTPGGI--YVALAASDSAAE 318 Query: 315 ALIMAMQTLRLF 326 L+ MQ LRL Sbjct: 319 PLVATMQVLRLL 330 >UniRef50_B4AUN7 Membrane protein AbrB duplication n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AUN7_9CHRO Length = 369 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 98/326 (30%), Positives = 159/326 (48%), Gaps = 12/326 (3%) Query: 23 VHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 + +P LLGP++ G++ ++ Q LP S AAQ I+ A + + L+TL Sbjct: 34 LDIPGDWLLGPLLIGVLATLNPDKAQPLPPSLATAAQVIIALGTAASFS---LSTLFQAA 90 Query: 82 PIVLAILLVTLLSSAIV---GWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 LA+L+ +L+ + G+LL R++ + TG GS PG ++VAM+++ GAD Sbjct: 91 HYTLAMLMCIVLTGGLCLGKGYLLWRWAGIDIKTGFLGSIPGAGHSIVAMSEEMGADALA 150 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVN-----QHIVWFPPVSINLLLTILLAVVA 193 VA QYLR+L V L+ ++ +VN H S+NL L LL + Sbjct: 151 VAVFQYLRILLVLILIPLLAGYFFPVDSVSVNVPSVITHQFSLTEFSVNLALLTLLGALG 210 Query: 194 GTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILL 253 G LRLP + P+L G + + LP+ +L + + +G IGL F+ Q Sbjct: 211 VLGGRWLRLPQAVFIGPLLTGLLAFWFFPYPLYLPKLVLNIGLLLLGLSIGLKFNWQAAQ 270 Query: 254 RALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 + ++ + L+ + L+ C G+ + +D +TA L ++PGGL V D Sbjct: 271 KLIKAVLIELILVIILILGCLGVGYEFHWLTGVDLITALLGSTPGGLMAVMAATIQLGGD 330 Query: 314 MALIMAMQTLRLFSILLTGPAIARFI 339 L++ MQ R+F ILL P +A F+ Sbjct: 331 SGLVLGMQMSRMFLILLITPWLASFL 356 >UniRef50_Q2BDN3 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BDN3_9BACI Length = 362 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 97/342 (28%), Positives = 160/342 (46%), Gaps = 19/342 (5%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQL--PRSAFLAAQAILGCMIAQNLTGSILTTL 77 F +HLP LLG + A I+ + R I +L PR A ++G I T ++ + Sbjct: 24 FTLLHLPIPWLLGSLTA-ILAASRFIPFKLEWPRKLRDAGILMVGYSIGLTFTKDAVSQM 82 Query: 78 AVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQD-YGADI 136 + P +LA+ L+T+ S ++ ++ R S + T GS PGG + M+ A++ G D+ Sbjct: 83 SGKLPSMLAMTLLTIAFSVLLAVIVSRISGIDFPTVLTGSIPGGLSQMLVFAEESEGIDL 142 Query: 137 RLVAFMQYLRVL-FVAGAAVLVTRMMLGDNA-------EAVNQHIVWFPPVSINLLLTIL 188 V F+Q R+L V LV +L A E + Q FP V + + Sbjct: 143 TTVTFLQVARLLMIVFFVPFLVLGPLLSGEAGPAAILQEEIPQWSALFPAV-----IPFI 197 Query: 189 LAVVAGT-VGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF 247 A +AG +G LRLP+ +L P++A A++ LP LL ++ IG IGL Sbjct: 198 FASLAGAYLGKKLRLPTPYLLGPIVATALMGIYFTRGPALPPSLLDLSQFFIGGHIGLLM 257 Query: 248 DKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307 + L + + LLS L+ + ++ L + T++L+ +PGG+D + ++A Sbjct: 258 RPEKLHHKTKTISLALLSGALLIGLSLLLSILLAFEYDLSSATSFLSLAPGGMDQMGILA 317 Query: 308 AGSNADMALIMAMQTLRLFSILLTGPAIAR-FISTYAPKRSA 348 +AD+A + Q R+F I P R + KR+A Sbjct: 318 HEVHADLATVTGYQLFRIFFIFFAVPPALRWYFRLRTRKRTA 359 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 11/158 (6%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAG---AVLQSGQLI--TIELPEWLLAMAY 236 L +A+ G + LL LP IP L G A+L + + I +E P L Sbjct: 9 GFLAAFFIALAGGIIFTLLHLP-----IPWLLGSLTAILAASRFIPFKLEWPRKLRDAGI 63 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 + +G+ IGL F K + + LP +L +A +A ++R IDF T + Sbjct: 64 LMVGYSIGLTFTKDAVSQMSGKLPSMLAMTLLTIAFSVLLAVIVSRISGIDFPTVLTGSI 123 Query: 297 PGGLDTVAVIAAGSNA-DMALIMAMQTLRLFSILLTGP 333 PGGL + V A S D+ + +Q RL I+ P Sbjct: 124 PGGLSQMLVFAEESEGIDLTTVTFLQVARLLMIVFFVP 161 >UniRef50_C0Z7B6 Conserved hypothetical membrane protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7B6_BREBN Length = 355 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 156/336 (46%), Gaps = 18/336 (5%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAILGCMIAQNLTGSILTTLA 78 F +H P LLG ++ +I +M G+ L +PR A ++G + +T I+ T+ Sbjct: 19 FATIHSPLPWLLGALVTTVICNMLGVKNLWIPRWFRQAGLTVIGITLGLRMTSEIVDTMT 78 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 + ++L ++T+L S + W+ + + G T + + PGG + MV++ Q G + ++ Sbjct: 79 GHVGLMLITTILTILISLVNAWIFYKICRVDGITAIFSNIPGGLSEMVSVGQMAGGNQQV 138 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNA--EAVNQHIVWFPPVSINLLLTILLAVVAGTV 196 + +R + V + + A A +H++ I + IL VAG + Sbjct: 139 ITIFHSIRAISVVLCTPYLVAFLPTHAAIQTATTEHVL-----GIGQTVMIL---VAGLI 190 Query: 197 GCLL----RLPSGTMLIPMLAGAVLQSGQLITIE---LPEWLLAMAYMAIGWRIGLGFDK 249 G L+ +P+ +L +L A++ + E LP L+ A + IG IGLGF + Sbjct: 191 GALIASRCYIPAPFLLGALLVTALISMNTSLVGESPALPSILVQGAQIFIGVSIGLGFKR 250 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 + +++ R L+ L + +A G++ D +TA LAT PGGL +++ A Sbjct: 251 EDIVKNRRFFLFGLMHSLFLFVMVIVLAIGISYVTATDIVTAILATVPGGLAEMSLTALA 310 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 + AD L+ A RL +L AR + Y + Sbjct: 311 TGADPLLVTAFHLFRLVLVLTLFSFGARAWTNYHSR 346 >UniRef50_Q8ET66 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ET66_OCEIH Length = 349 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 139/309 (44%), Gaps = 9/309 (2%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLA--AQAILGCMIAQNLTGSILTTL 77 F + LP LLGP+ +I ++ + L F I G +I T L + Sbjct: 15 FSVIGLPMPWLLGPLFFVLITQLKA-PISLTWHPFFRNIGLVIAGYVIGYAFTLEALQQM 73 Query: 78 AVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGA-DI 136 +P+++AI ++ L ++ ++L R S + T PGG ++ A++ D+ Sbjct: 74 IHFFPLMIAINVLFFLLFLVISFVLSRLSKMNLGTAMTCCVPGGLQQVIVFAEEQKEMDV 133 Query: 137 RLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTV 196 LV F LRVL + + + + +Q S LL +++A G + Sbjct: 134 TLVTFYHVLRVLVIVSMVPFIVSIQGPNLPVETSQS----EKYSFILLGLMIVAYFVGML 189 Query: 197 GCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRAL 256 L+++P+ +L P+ V +P+ L +A + IG IGL + + + Sbjct: 190 FKLIKVPTAYLLGPVFFVMVCNLVGWQVPMMPDSALHIAQLFIGIYIGLLLKRDSIKKMN 249 Query: 257 RPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMAL 316 + LLS ++ G++W + + + DF T++L+ PGGLD + +IAA AD+ + Sbjct: 250 KQWMYALLSCVIFVSFALGISWFVKQ-AYFDFSTSFLSVVPGGLDQMGIIAASVQADVMI 308 Query: 317 IMAMQTLRL 325 + A Q R+ Sbjct: 309 VTAFQLFRI 317 >UniRef50_A8ER15 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ER15_ARCB4 Length = 361 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 87/328 (26%), Positives = 139/328 (42%), Gaps = 12/328 (3%) Query: 17 SIGFLAVHLPAALLLGPMIAGII---FSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSI 73 SI F+ +H P LLG + A I F I+ P SA A+ ++G I T I Sbjct: 31 SILFIFLHFPLPWLLGAIFATTIAIRFPTVPISSPKPFSA--PARILIGLTIGSAFTPHI 88 Query: 74 LTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYG 133 L + +L ++ TLL + + T GS PGG MV + QD Sbjct: 89 LQYIPHYIISLLLVIPFTLLVIFFGTYYYHKILKYDLKTSYLGSMPGGVIEMVIIGQDLK 148 Query: 134 ADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL---LTILLA 190 AD + MQ R+ FV + + + + + NQ I+ P INL +L Sbjct: 149 ADTSKITLMQSSRLFFVIVSLPFIIQYIFQIDIRG-NQ-ILTTPIKDINLFEFSYIYILG 206 Query: 191 VVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQ 250 + + LRL + ++ PM+ +L S + +P+ LL + G IG F K Sbjct: 207 IAGAIIAKRLRLAAAYLIGPMIVSIILYSTGFVHTHIPDELLKFIQVIFGTIIGFTF-KN 265 Query: 251 ILLRALRPLPQILLSIFALLAI-CAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 + L+ + L FA+L I CA + + + + + LA PGG + ++A Sbjct: 266 VSLKTISKTFLATLGHFAILIILCAIFIFIIYKSLDFKALDILLAFGPGGQTEINLVAIL 325 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIAR 337 A++ I +RLF ++ P IA+ Sbjct: 326 IGANLPYITLHHIVRLFIVMNIAPIIAK 353 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 20/172 (11%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSG-----QLITIELPEWLL 232 P+ I +LL +L+AV + L P +P L GA+ + + I P+ Sbjct: 15 PILIKMLLALLIAVSGSILFIFLHFP-----LPWLLGAIFATTIAIRFPTVPISSPKPFS 69 Query: 233 AMAYMAIGWRIGLGFDKQILLRALRPLPQILLSI-----FALLAICAGMAWGLTRFMHID 287 A A + IG IG F IL + +P ++S+ F LL I G + + + D Sbjct: 70 APARILIGLTIGSAFTPHIL----QYIPHYIISLLLVIPFTLLVIFFG-TYYYHKILKYD 124 Query: 288 FMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 T+YL + PGG+ + +I AD + I MQ+ RLF ++++ P I ++I Sbjct: 125 LKTSYLGSMPGGVIEMVIIGQDLKADTSKITLMQSSRLFFVIVSLPFIIQYI 176 >UniRef50_A1HS75 Putative ammonia monooxygenase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS75_9FIRM Length = 357 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 81/325 (24%), Positives = 145/325 (44%), Gaps = 17/325 (5%) Query: 24 HLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWP 82 H+P LGPM+A +++ + P+ +LG ++ T + P Sbjct: 23 HIPLPWTLGPMVAAVLWKTWLKKPVYWPKKMRNIGMLVLGYVMGSPFTPETGHQIIGQLP 82 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQD-YGADIRLVAF 141 +LA L+ ++ +L R + + G PGG + M + ++ G D+ +V Sbjct: 83 TMLAATLLIVVVCLATSYLAGRVTGIGTANSLIGGMPGGLSQMAMICEETKGTDVSVVTI 142 Query: 142 MQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGC--- 198 MQ +R+L V V + D AV V P++I + + + VA T Sbjct: 143 MQTIRLLTVVFTVPFVALHGIADKTSAVKPQAV---PITIQDIPMLCVFFVAITCAISFI 199 Query: 199 -LLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR--- 254 +R PS ++ P+L A L + LP ++A A + +G ++GL + L Sbjct: 200 KHIRFPSPYVIGPVLGTAALTLAGIHAPVLPPPVIAAAQILVGIKMGLDLEVTRLSNWRT 259 Query: 255 -ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 AL ++ +IF LL G A+ + I +T +++ +PGG+ +A+ A +NAD Sbjct: 260 IALSSFASVIAAIFLLL----GAAYLFSLLTSIPLITVFISMAPGGMSEMALTAMIANAD 315 Query: 314 MALIMAMQTLRLFSILLTGPAIARF 338 ++ ++A Q RL IL+ AR+ Sbjct: 316 LSTVVAYQLFRLLFILVVAVPTARW 340 >UniRef50_C5SZI4 Membrane protein AbrB duplication n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZI4_ACIDE Length = 364 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 151/335 (45%), Gaps = 21/335 (6%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 F +H P +LGP++A + +++G++ + + Q ++G + T +I+T L Sbjct: 21 FRRLHTPVPWMLGPLLATALSTLKGLSTRSSLRLRNSGQWVMGASLGLYFTPAIVTQLCA 80 Query: 80 NWPIVLAILLVTLLSSAIVG-WLLVRYSSLPGN-----------TGAWGSSPGGAAAMVA 127 W VLA + +L + G WL YSS G + + + G A+ M Sbjct: 81 LWWAVLAAVAWSLALGMVYGCWL---YSSCAGRLHGVDDAALRPSAYFAGAIGAASEMTL 137 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN---AEAVNQHIVWFPPVSINLL 184 +A+ A LVA LR+L V V+ M+L + E V+ + PP ++ Sbjct: 138 LAEKESARTDLVAASHSLRMLIVV--LVMPFGMLLAKSWWSLEVVSLAPLVSPPFTLTGA 195 Query: 185 LTILLAVVAGTVG-CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 + L VAG + +LRLP+ L P+L L + + +P L A + IG + Sbjct: 196 AWLALLTVAGGLALHVLRLPNPWFLGPLLVAITLAATETAPATVPMLLSNAAQLVIGVSL 255 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G+ F Q L A R L ++ L L+A CA L + TA L T+PGG+ + Sbjct: 256 GVRFSPQFLHTAPRWLARVALGTVGLIAACAAFGVFLAWVTGLHPATAILGTAPGGMTEM 315 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 ++ A + ++ A+Q RL ++L+ RF Sbjct: 316 SITAKALQLGVPVVTALQVTRLVAVLVLVRPAYRF 350 >UniRef50_A3JPA2 Putative ammonia monooxygenase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JPA2_9RHOB Length = 350 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 68/271 (25%), Positives = 133/271 (49%), Gaps = 9/271 (3%) Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 I+G I +T I+T +L ++L ++ + +L R + P + +P Sbjct: 68 IIGVAIGSQITPEIVTRAPEIAISLLGVVLFVPIAHFVNYMILRRLAGYPRYDALFAGAP 127 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN---AEAVNQHIVWF 176 GG + +A++YGAD++ V +LRV+FV L+ + LG+ A A I Sbjct: 128 GGFIESITLAEEYGADVKRVGIQHFLRVVFVIFLVPLILTLYLGNPVGVARADVFVIDMV 187 Query: 177 PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 PPV I L+ + A+ + L++P+G ++ P++ A++ ++++P W++A Sbjct: 188 PPVQIALIANV--ALFGFLIARALKIPAGMLIGPLIIAAIISGFNGPSLDVPTWVVAFGQ 245 Query: 237 MAIGWRIGLGFD--KQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 + +G +G+ F K LL L+ L+++ A L + A + L F T ++ Sbjct: 246 IIVGTSLGIRFQGLKGKLL--LKSAWWCLVTVSATLVLSATFSQILYGIGGQSFETLLIS 303 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRL 325 +PGGL + +IA +A+ A+++ +R+ Sbjct: 304 FAPGGLTEMGLIALSLSANSAVVVFHHLVRI 334 >UniRef50_Q9RC51 BH3837 protein n=3 Tax=Bacillus RepID=Q9RC51_BACHD Length = 343 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 157/328 (47%), Gaps = 14/328 (4%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLT-GSILTTLA 78 F A +PA LLG +++G++ ++ + LP F A +G I L L + Sbjct: 18 FAAFQVPAGWLLGSLLSGMVCTLWIKKIMLPDRLFKWTLAAIGGNIGFMLRPEQFLQYHS 77 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 + P V+ ++L TL ++G L R+S++ NT + PGGA+ ++A+++DYGAD R+ Sbjct: 78 LLGPFVVTLVL-TLCGGILLGKFLKRFSNVNHNTAFFCCMPGGASEVIALSKDYGADQRI 136 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL-LTILLAVVAGTV- 196 VA R+ F V V + +G N F P+ LL L L+AVV T+ Sbjct: 137 VAAFHTTRITFF----VFVIPLFVGLNVTGRTGLGTMFLPLDETLLALGALMAVVVLTIF 192 Query: 197 -GCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQIL--L 253 + P ++ + G ++ + I LP ++ +A +G IG FD++ L Sbjct: 193 LSKHVTFPGASLFFAIGLGFLVHT-LFPQIILPGYVQGVAQGVMGAVIGARFDRETFGEL 251 Query: 254 RALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 + + + I L ++ ++++ G+A T +++ + L+ P G +A A + Sbjct: 252 KRMGFISAITLLLYFIMSL--GLAGLFTWMTPLEWYMSLLSIVPAGAAEMASTATALQME 309 Query: 314 MALIMAMQTLRLFSILLTGPAIARFIST 341 A++ +Q R+ ++ L P + ++ S Sbjct: 310 PAMVATLQMARVLALFLCLPFLIKWFSK 337 >UniRef50_A8Z2I6 Possible ammonia monooxygenase n=51 Tax=Staphylococcus aureus RepID=A8Z2I6_STAAT Length = 357 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 83/352 (23%), Positives = 162/352 (46%), Gaps = 17/352 (4%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQ---AILGCM 64 ++ VLS +SI + H+ + GP+IA II ++ L + + FL ++ +LG Sbjct: 10 IVFVLSFFISILLYSSHVLLPFMFGPIIASII-CVKVFKLDI-KWPFLLSELGIVLLGVQ 67 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 I T +++ + NW ++ + + LL + ++ ++ + + + T PG Sbjct: 68 IGSTFTKNVVMDIKNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIPGALTQ 127 Query: 125 MVAMA-QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS--I 181 M+ MA QD A++ +V+ Q R++FV ++ N A N + P+S + Sbjct: 128 MLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFISYFFHDGNMHA-NGKLTKVLPLSQVL 186 Query: 182 NLLLTILLAVVAGTVGCLL---RLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 N+ ++LA+ V ++ + P+ +L P++ V +T L WLL MA + Sbjct: 187 NIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLLNMAQLI 246 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAG--MAWGLTRFMHIDFMTAYLATS 296 RIG+ LL L+ I ++I ++ I M + + F + +L + Sbjct: 247 YMIRIGVQIAH--LLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLGAA 304 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQ-TLRLFSILLTGPAIARFISTYAPKRS 347 PGG++ + ++A + AD+A+I + F + + P I F+ + KR Sbjct: 305 PGGVNQIVLVALATGADVAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRE 356 >UniRef50_Q1YFT4 Possible ammonia monooxygenase n=2 Tax=Aurantimonadaceae RepID=Q1YFT4_MOBAS Length = 366 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 12/320 (3%) Query: 26 PAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVL 85 P A LLGP++ S+ G+ +LP+ A ILG +T ++L +A+ WP+ Sbjct: 32 PVAWLLGPVLVVSAASIAGLDTRLPQGLRTLAFFILGVQAGSGVTPAVLDQMAI-WPLSF 90 Query: 86 AILLVTLLSSAIVGWLLVRYS-SLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQY 144 + ++ +L IV +RY +T + S PG + ++A A + AD+ V +Q Sbjct: 91 TVQMLGILVVIIVTRAFLRYGLGWDRDTALFASLPGALSFVLAAASETRADLPRVTIVQS 150 Query: 145 LRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPS 204 +R+L + GA V G + V P++ LLL + + V A +G L+RLP Sbjct: 151 VRLLILIGALTPVLGWFEGGE-DVVAASRGTDGPLTEYLLL-LFVCVAAAALGHLVRLPG 208 Query: 205 GTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG---LGFDKQILLRALRPLPQ 261 G ML ++ A + G+ T+ +P L + + +G IG G D++ + AL P Sbjct: 209 GMMLGALIGSAFMHVGEFATVAIPPALAVPSLILLGALIGSRLQGLDRKGVF-ALLPAA- 266 Query: 262 ILLSIFALLAICAGMAWGLTRF-MHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAM 320 + FA+ + + ++ + + I LA +PG L+ + V+A + D A + A Sbjct: 267 --IGSFAIGIVISAISVAVAVLVLEISVGKVALAYAPGALEALTVLAFQFDVDPAYVAAH 324 Query: 321 QTLRLFSILLTGPAIARFIS 340 +R I L P +A+ I+ Sbjct: 325 HVVRFICIALMVPLLAKHIA 344 >UniRef50_A6TSB9 Putative ammonia monooxygenase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TSB9_ALKMQ Length = 346 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 95/349 (27%), Positives = 162/349 (46%), Gaps = 40/349 (11%) Query: 14 LLLSIGFL------AVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGCMIA 66 L++SIG + PA LLGPMI I S+ G LP+ + Q I+G + Sbjct: 5 LIVSIGLFGWLVMRKIKAPAPALLGPMIFVGIASIGGFNFPHLPQVSVSIFQLIIGIFVG 64 Query: 67 QNLTG---SILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 +T +L V + +L IL+ T+ SS + +L+ + L T +PGG Sbjct: 65 MRITRGQFQLLKRRTVLYSFIL-ILIWTVGSSLVAANVLLTLTDLDVATALLAGTPGGLT 123 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN---------AEAVNQHIV 174 M +A YGAD+ VA +Q LR+ F+ ++ + N + V + +V Sbjct: 124 EMSVVAFAYGADVPTVALLQLLRLTFIVSFIPFLSLSIKKKNGGYTEKIKDKKDVIEEVV 183 Query: 175 WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITI-----ELPE 229 VS+ ++ T ++ G + L P+G ++ GA++ G I LP+ Sbjct: 184 K-RKVSVEIIGT---GLIVGVLLMYLNFPAGGLI-----GAIIGVGGSSIILNKSAYLPK 234 Query: 230 WLLAMAYMAIGWRIGLGFDKQILLRALRPL-PQILLSIFALLA--ICAGMAWGLTRFMHI 286 + +A + IG IGL F ++ + R + P I+L +F +L+ + A + +T++ Sbjct: 235 SVQLIAQIGIGISIGLRFTQETFQQFSRLIGPMIILPLFMVLSGVLLAIIIKNITKW--- 291 Query: 287 DFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAI 335 D T L ++P GL + ++A +D+ L+ QT RL +I L P I Sbjct: 292 DLSTCLLCSAPAGLSQMIIVAEEIESDVFLVSLFQTTRLLAIYLILPQI 340 >UniRef50_Q7D1Z3 Putative uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D1Z3_AGRT5 Length = 348 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 144/308 (46%), Gaps = 15/308 (4%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPI 83 H+PA L GP +A I + G+ L +P A ++G + ++T S++ A WP+ Sbjct: 28 HIPAPFLSGPALAVTITGLAGVKLGIPAFIRNACFVVVGISMGTSVTPSVIDA-AKTWPL 86 Query: 84 VLAILLVTLLSSAIVGWLLVRYS-SLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 ++LV ++ V + ++ Y T G+SPG + ++++ + +D+ V+ + Sbjct: 87 SFIVVLVAVVIMLYVAYWILHYGFGYDRTTAMLGASPGHLSYIISLGAETKSDLATVSIV 146 Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI-NLLLTILLAVVAGTVGCLLR 201 Q +RVL + + L+ + E + + PP+ L LTI +++ G + + Sbjct: 147 QSVRVLALTLSVPLIVEYFDLVSTEPLITN----PPMGFFTLALTIAASLLTGWLFLRWK 202 Query: 202 LPSGTMLIPMLAGAVLQSGQLIT--IE--LPEWLLAMAYMAIGWRIGLGFDKQILLRALR 257 P+ +L G + G IT E +P WL Y+ IG IG F L+ + Sbjct: 203 FPAALLL----GGVAISIGTHITGLTEGGVPSWLSLPVYVLIGCLIGTRFSNVSLMEVRK 258 Query: 258 PLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALI 317 + A++ I +AW ++R + +A +PGGL+T+A +A +AD A + Sbjct: 259 GFLAGFVVTIAVMVIAGTIAWLISRVTGVPLNAVMIAYAPGGLETMAAMAVMMHADTAYV 318 Query: 318 MAMQTLRL 325 + +RL Sbjct: 319 GSHHVIRL 326 >UniRef50_B9R4Z7 Putative ammonia monooxygenase superfamily n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R4Z7_9RHOB Length = 367 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 83/325 (25%), Positives = 154/325 (47%), Gaps = 7/325 (2%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIV 84 LPAA L G MI ++ G+ +P +LG + + ++ ++ WP+ Sbjct: 31 LPAAWLSGAMILVAAATLAGVPTVMPNKFRDGLFVLLGISMGAGVQPEVVERVS-EWPLS 89 Query: 85 LAILLVTLLSSAIVGWLLVRYSSL-PGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQ 143 +A+LL+ ++ I G+ ++RY++ T +G+ PG A ++A+A + AD+ +A Q Sbjct: 90 MAMLLLVVVGVTIAGYCVLRYAAHWQKETAFFGAIPGTLAYVIALASERRADLPRIASTQ 149 Query: 144 YLRVLF-VAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRL 202 +R+ F +A V D + V+++ +I + L IL +++A V R Sbjct: 150 SVRLFFLIALLPFAVVSTTDTDASITVSRYTSDLWDYAIGVPLCILGSLLAVKV----RF 205 Query: 203 PSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQI 262 P G M A L + + + LPE ++ + +A+G IG F++ + L Sbjct: 206 PGGWMTGAFFTSAGLNASGAVHLVLPESIVLICMVAMGALIGCRFNEMTFREFVSVLSAS 265 Query: 263 LLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQT 322 + + A ++ A ++ + I F A LA +PGGL+ + ++A + D A + A Q Sbjct: 266 VSAFAAAFSVSVAGAGFVSWMIDIPFGQALLAFAPGGLEVMTLMAFVLDLDPAFVAAHQI 325 Query: 323 LRLFSILLTGPAIARFISTYAPKRS 347 +R ++L PAI AP+ S Sbjct: 326 VRFTGMVLLLPAITLITIGRAPQSS 350 >UniRef50_A7IC16 Putative ammonia monooxygenase n=2 Tax=Xanthobacteraceae RepID=A7IC16_XANP2 Length = 367 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 99/332 (29%), Positives = 150/332 (45%), Gaps = 27/332 (8%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 F A+ LPAA + G ++ I ++ G+ + +P A +LG + LT A Sbjct: 28 FAALGLPAAWISGALVVSIALAVAGVRIAVPEWIRFLAFIVLGTSMGTALTPETFAR-AA 86 Query: 80 NWPIVLAILLVTLLSSAIVGWL-LVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 WPI +A L ++L++ G L L R + T W S+PG +VAMA D AD+R Sbjct: 87 TWPISMACLGASVLATMAGGALFLNRVAGWSRETAFWASAPGAFGTVVAMAADTSADLRK 146 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLA--VVAGTV 196 VAF Q LR LF+ AA+ G A + P VS L + ILL V G Sbjct: 147 VAFAQALR-LFLLVAALPNVLGATGLTAGGLPPP----PHVSTALEVAILLGVCVTTGLG 201 Query: 197 GCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQIL--LR 254 L++P G +L + A L + L + LP+ + A++ +G +G+ F L +R Sbjct: 202 AAWLKVPGGLILGALAGSAALHATSLSSAVLPQAFIVPAFVVLGASVGVRFLGTTLGTIR 261 Query: 255 A--LRPLPQILLSI-----FALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307 A L L+++ FALLA AW LT +TA+ +PG L+ + + Sbjct: 262 AYFFASLGAFLVAVSISTLFALLA-----AW-LTGDDLGKLVTAF---APGALEAMTALG 312 Query: 308 AGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 D A + A R + + P AR + Sbjct: 313 FALGYDPAFMSAHHLFRFAGLSVALPVAARLL 344 >UniRef50_D0RN43 Putative ammonia monooxygenase superfamily protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN43_9RICK Length = 351 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 72/315 (22%), Positives = 137/315 (43%), Gaps = 22/315 (6%) Query: 41 SMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGW 100 S + + FL I+G ++A + ++L + + +A+++ T++ S +V + Sbjct: 46 SFTSYKITFDKKIFLPVLLIIGVILAGSFNITLLYKIHLWIYSSIAMIVCTIIGSIVVAF 105 Query: 101 LLVRYSSLPGNTGAWGSSPGG---AAAMVAMAQDYGADIRLVAFMQYLRVLFVAG--AAV 155 + PG AA + D + V Q RVLF+ V Sbjct: 106 YFYKVCKFRKLVAVLAGLPGAFVVIAAAINQMTDSKKESGQVVIPQATRVLFIVLILPFV 165 Query: 156 LVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCL----LRLPSGTMLIPM 211 VT++ + + N P S+ L ++ + +G + L++PS +L M Sbjct: 166 FVTQVGYQEISSHGNN-----PDYSLRYFLELIFLLGIAQLGSMGLKRLKVPSAPILAAM 220 Query: 212 LAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFD----KQILLRALRPLPQILLSIF 267 + + + ++ T P++ + +A++ +G IG K+I L ++S+ Sbjct: 221 ILCGIFYTFEITTARFPDFFINIAFVFLGSAIGCRLSGLPIKEI---GFYSLHGFIVSVL 277 Query: 268 ALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFS 327 LL I A A+ L F+ DFM A+L+ +PGGL + VI+ N D + LR+F Sbjct: 278 -LLGIAAIFAYLLKVFLGFDFMAAFLSFAPGGLHEMVVISIAYNIDPLFVTYHHFLRIFL 336 Query: 328 ILLTGPAIARFISTY 342 I+ + P I ++ S + Sbjct: 337 IIFSIPFILKYFSKH 351 >UniRef50_C6Q0M4 Membrane protein AbrB duplication n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0M4_9CLOT Length = 363 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 81/352 (23%), Positives = 163/352 (46%), Gaps = 41/352 (11%) Query: 21 LAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLT-GSILTTLAV 79 L + +PA ++G M+ +FS+ +P++ + Q G I ++ +L + Sbjct: 22 LRLKIPAGAMVGSMVVVAVFSVITGHAFIPQNIKIITQICAGAYIGASIKRKDVLEMRLI 81 Query: 80 NWPIVLAIL-LVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 P +L ++ ++TL +G+++ R + + T + ++P G M ++ D+GAD Sbjct: 82 IKPAILMVVSMITL--DLFMGYVMFRVTRIDLITALFSTAPAGIVDMSLISDDFGADTSK 139 Query: 139 VAFMQYLRVL-----------FVAGAAVLVTRMMLGDNAEAVNQ-----------HIVWF 176 V + +R++ F+A + + L + A +V++ + Sbjct: 140 VVVLHLIRLVTVLIVFPPMMNFIAKSFKNEDKNALDEIASSVDEANLQRKSNRTKNKSTL 199 Query: 177 PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLA-GA--VLQSGQLITIELPEWLLA 233 SINLL+T +LA+ G +G +L++P+GTM M A GA V+ + + L Sbjct: 200 KEKSINLLITTVLALATGLIGYILKIPAGTMTFSMAAVGALNVIFDKGFMPLNLRRLTQM 259 Query: 234 MAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALL----AICAGMAWGLTRFMHIDFM 289 A IG R+ G Q L IL+ F LL ++ + + + + ++ + Sbjct: 260 FAGALIGSRVTYGDIVQ--------LKSILIPAFILLIGIISVNLFIGFLINKTSGLELI 311 Query: 290 TAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 T+ LA++PGGL +A+IA D I + T+R+ +++ P + + +++ Sbjct: 312 TSLLASAPGGLSDMALIAKELGGDAPKIAILHTVRVVTVIGIFPLLIKIVTS 363 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 88/162 (54%), Gaps = 5/162 (3%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQ--SGQLITIELPEWLLAMAYMA 238 INL++T+++A++ GT+ L++P+G M+ M+ AV +G +P+ + + + Sbjct: 5 INLIMTLIVAILGGTIALRLKIPAGAMVGSMVVVAVFSVITGHAF---IPQNIKIITQIC 61 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 G IG ++ +L + +L + +++ + M + + R ID +TA +T+P Sbjct: 62 AGAYIGASIKRKDVLEMRLIIKPAILMVVSMITLDLFMGYVMFRVTRIDLITALFSTAPA 121 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 G+ +++I+ AD + ++ + +RL ++L+ P + FI+ Sbjct: 122 GIVDMSLISDDFGADTSKVVVLHLIRLVTVLIVFPPMMNFIA 163 >UniRef50_O07568 Uncharacterized protein yhjN n=6 Tax=Bacillus RepID=YHJN_BACSU Length = 384 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 88/343 (25%), Positives = 157/343 (45%), Gaps = 28/343 (8%) Query: 21 LAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVN 80 LA+ PA L++ P GI R Q ILG + Q L S+L+ L + Sbjct: 44 LAMIRPAWLMMAPDQKGI-----------NRRWLALGQMILGIELGQKLNLSVLSVLKDH 92 Query: 81 WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVA 140 W V +L++++L + + G++L R+S T G++PGG +AM ++AQ+ GA+ +V+ Sbjct: 93 WFSVGVMLILSILLAMLSGYVLWRFSKTDMMTSFVGTAPGGLSAMPSIAQEVGANTAIVS 152 Query: 141 FMQYLRVLFVAGAAVLVTRMMLGDN-------AEAVNQHIVWF--PPVSINLLLTILLAV 191 +Q +RVL V + + ++ AE ++ F PV ++L IL A Sbjct: 153 LVQMMRVLLVVLSIPFLVILIYTKQDRTASAAAETISSATTDFRLAPVLWTVIL-ILAAW 211 Query: 192 VAGTVGCLLRLPSGTMLIPMLAGAVLQSG--QLITIELPEWLLAMAYMA----IGWRIGL 245 A L+ P+ +L ML A++ G + ++ W L+ A +G IG Sbjct: 212 GACKAAKFLKFPAPWLLGSMLGVAIVHVGGAAVTGHDMTAWWLSQANHVSQVFLGATIGS 271 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 K + R + +S L+A A ++ I +T+ LA +PGG+ +A Sbjct: 272 KMYKSMFAGVTRIIIVGFVSSVGLIAAMFLSAVIVSELTGISLITSVLAFAPGGIAEMAT 331 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST-YAPKRS 347 + +AD ++A+Q +R+ ++ P R + + K+ Sbjct: 332 TSVTLHADSTFVVAVQVIRVILVIALLPPFYRLLHHLHGEKKD 374 Score = 40.8 bits (94), Expect = 0.074, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Query: 269 LLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSI 328 LLA+ +G L RF D MT+++ T+PGGL + IA A+ A++ +Q +R+ + Sbjct: 105 LLAMLSGYV--LWRFSKTDMMTSFVGTAPGGLSAMPSIAQEVGANTAIVSLVQMMRVLLV 162 Query: 329 LLTGPAIARFISTYAPKRSA 348 +L+ P + I T + ++ Sbjct: 163 VLSIPFLVILIYTKQDRTAS 182 >UniRef50_A9D2G7 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D2G7_9RHIZ Length = 345 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 92/342 (26%), Positives = 157/342 (45%), Gaps = 31/342 (9%) Query: 1 MPVLQWG---MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLP----RSA 53 MP + W + +++L ++ F A+ PA L GP + + G+ +Q P R A Sbjct: 1 MPPVSWQASVLTIAVAVLGAVLFAALSFPAPYLTGPATMITLAGLAGMKIQSPPLLLRHA 60 Query: 54 FLAAQAILGCMIAQNLTGSILTTLAVNWPIVL-----AILLVTLLSSAIVGWLLVRYSSL 108 ILG I Q +T +L + WP+ L +IL + LL+ A LVRY S+ Sbjct: 61 VFV---ILGLTIGQGVTPEVLDAMR-TWPVTLTALAASILAIILLTRAA----LVRYWSM 112 Query: 109 PGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVL---FVAGAAVLVTRMMLGDN 165 T SSPG + ++ + + AD++ V+ +Q +RVL + AA+ +T + Sbjct: 113 DPTTAFLSSSPGHLSYVLGLTEGVKADLKTVSIVQSIRVLALTLLVPAAIALTGQL--PE 170 Query: 166 AEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITI 225 AV P L+L IL A + G + L+LP+ ++ ML L ++ Sbjct: 171 RPAVGPEETALVP----LVLMILCAALVGYLLHRLKLPAAYLIGGMLVSVGLHVTGIVEG 226 Query: 226 ELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGM-AWGLTRFM 284 + WL A A++++G IG F + L+ LR +++ L + AG+ A Sbjct: 227 VMSYWLAAAAFVSLGALIGSRFSG-VTLKELRHAFSAGVAVTVLGVVLAGIFAVIAAEIT 285 Query: 285 HIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLF 326 +D + +A +PGGL+T+A ++ D + + RL Sbjct: 286 GMDVVAVLIAFAPGGLETMAAMSVILGIDPTFVASHHVARLL 327 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 20/182 (10%) Query: 177 PPVSINL-LLTILLAVVAGTVGCLLRLPSGTMLIPM-------LAGAVLQSGQLITIELP 228 PPVS +LTI +AV+ + L P+ + P LAG +QS P Sbjct: 2 PPVSWQASVLTIAVAVLGAVLFAALSFPAPYLTGPATMITLAGLAGMKIQS--------P 53 Query: 229 EWLLAMA-YMAIGWRIGLGFDKQILLRALRPLPQILLSIFA-LLAICAGMAWGLTRFMHI 286 LL A ++ +G IG G ++L A+R P L ++ A +LAI L R+ + Sbjct: 54 PLLLRHAVFVILGLTIGQGVTPEVL-DAMRTWPVTLTALAASILAIILLTRAALVRYWSM 112 Query: 287 DFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 D TA+L++SPG L V + G AD+ + +Q++R+ ++ L PA A ++ P+R Sbjct: 113 DPTTAFLSSSPGHLSYVLGLTEGVKADLKTVSIVQSIRVLALTLLVPA-AIALTGQLPER 171 Query: 347 SA 348 A Sbjct: 172 PA 173 >UniRef50_A3VKP5 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VKP5_9RHOB Length = 355 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/310 (23%), Positives = 148/310 (47%), Gaps = 18/310 (5%) Query: 43 RGITLQLP-RSAFLAAQAILGCMIAQNLTGSILT---TLAVNWPIVLAILLVTLLSSAIV 98 +G + LP R F+ ++G MI ++ +LT L V+ P AILL +L+ + Sbjct: 56 QGYSYPLPFRQLFVG---VIGVMIGAQVSPDLLTLAPKLLVSIP---AILLFVVLAHSAN 109 Query: 99 GWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVT 158 + + L T + SPGG +A +D GADIR++ +Q+LR++ V Sbjct: 110 YLIFRKVGKLDRATAYYSGSPGGLLESIAFGEDAGADIRVLTILQFLRIIVVVAVLPFAI 169 Query: 159 RMMLGDN-AEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVL 217 + G+ A P + ++++L +L +V +G ++LP+ + P+ V Sbjct: 170 SIYEGEPVGSAAGLTTSADPAIWLDVVLVMLFSVAGVWLGGKVKLPASQLAGPLFLVGVA 229 Query: 218 QSGQLITIELPEWLLAMAYMAIGWRIGL---GFDKQILLRALRPLPQILLSIFALLAICA 274 + ++ + +P WL+A A + +G +GL G +++++ L S+ + AI + Sbjct: 230 TATGIVDLNIPGWLVASAQVVVGISLGLRFVGITRRMMISGLGLSLLSGASMLGIGAILS 289 Query: 275 GMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPA 334 + LT F T ++ +PGG+ +++IA A+ + +R+ + ++ A Sbjct: 290 LIVARLTDF---SLETLIISFAPGGVTEMSLIALSLAANPTFVTLHHLVRIVATVVE-LA 345 Query: 335 IARFISTYAP 344 + R ++ +AP Sbjct: 346 VVRKMNWFAP 355 >UniRef50_A0NRD3 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRD3_9RHOB Length = 349 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 7/313 (2%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIV 84 LPAA L G M+ I ++ + +P A ++G + + I+ +A WP+ Sbjct: 32 LPAAWLSGAMVFVAIATLAQVPTLMPALLRDALFIMIGISMGAGVHPDIVERVA-EWPVS 90 Query: 85 LAILLVTLLSSAIVGWLLVRYSSL-PGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQ 143 +A+LL +++ G+ ++ Y + T +GS PG + ++A+A + GAD+ +A Q Sbjct: 91 MAMLLAVMVAVTFAGYAVLHYGAKWSKETAFFGSIPGALSYVMALATERGADLPRIASSQ 150 Query: 144 YLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLP 203 LR LFV AVL ++ + V+ + + L+ I L + A + R+P Sbjct: 151 SLR-LFVL-VAVLPFAVVSSAEPTGIGGSTVYVSGLK-DFLIGIPLCLAASWLAVKTRVP 207 Query: 204 SGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPL-PQI 262 G + A L + L+ + LP +++ ++ +G IG F L + + L I Sbjct: 208 GGGLTGAFFMSAGLNASGLLVLVLPNYIVLPCFVMMGAHIGCRFGNMTLRQFVSVLGASI 267 Query: 263 LLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQT 322 A L AG AW + + I F A LA +PGGL+ + ++A + D A + A Q Sbjct: 268 AAFAAAFLTSLAG-AWMVAEMVDIPFGQALLAYAPGGLEVMTLLAFMLDLDPAFVAAHQI 326 Query: 323 LRLFSILLTGPAI 335 R ++L P I Sbjct: 327 ARFTGMVLLLPFI 339 >UniRef50_A4U1B8 Ammonia monooxygenase n=3 Tax=Magnetospirillum RepID=A4U1B8_9PROT Length = 346 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 9/328 (2%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 F LP +LG M A II ++ G+ L +P AILG M+ + +L L+ Sbjct: 20 FFMADLPLPWMLGAMSACIIAALSGLRLAMPTPLRAVMLAILGVMLGSAFSPDLLDQLS- 78 Query: 80 NWPIVLAILLV-TLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 W + L++L +L++ +V R + T + ++PGG MV G D R Sbjct: 79 RWSLSLSVLFAGMILATLLVMAYFRRAGHMDLPTAYFAAAPGGVNEMVMTGGALGGDERT 138 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS-INLLLTILLAVVAGTVG 197 +A + +LR+L + + R++ G + ++Q + +S ++ + + A G Sbjct: 139 IALIHFLRILLIVFTIPIGFRLVTGIHGAPISQSMGSLLDLSWLDGAVLLACAAGGAMAG 198 Query: 198 CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG---LGFDKQILLR 254 LLR P+ ++ PM A A+L L P L+ +A + G +G +G + L Sbjct: 199 RLLRFPAASLTGPMAASAILHVLGLTASHPPAELVILAQVVTGAGLGCRMVGLKWRDLAT 258 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 A R S L+ I AG+A L + F LA PGG+ + +IA D+ Sbjct: 259 AARIASG---STMILITISAGLAAILAWLAGLPFSMLLLAFVPGGIAEMCLIALALGQDV 315 Query: 315 ALIMAMQTLRLFSILLTGPAIARFISTY 342 A + LR+ ++ P R + Sbjct: 316 AFVSTHHVLRVILVIACAPLAFRLFKPW 343 >UniRef50_Q5HNN7 Membrane protein, putative n=14 Tax=Staphylococcus RepID=Q5HNN7_STAEQ Length = 355 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 77/335 (22%), Positives = 153/335 (45%), Gaps = 17/335 (5%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQA---ILGCMIAQNLTGSILTTLAVN 80 H+ + GP++A ++ ++ + L++ R F +Q +LG I T ++ ++ N Sbjct: 26 HVILPFMFGPILAALL-CVKVLKLKI-RWPFWLSQIGLILLGVQIGSTFTQQVIKDISKN 83 Query: 81 WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQD-YGADIRLV 139 W ++ + ++ +L + I+ + + + + T PG + M+ MA++ A+I +V Sbjct: 84 WLTIVFVTILLILLALIIAFFFKKIAQVNLETAILSVIPGALSQMLVMAEENKKANILVV 143 Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS--INLLLTILLAVVAGTVG 197 + Q RV+FV L++ DN +N + P +S +N+ I+L + G + Sbjct: 144 SLTQTSRVIFVVILVPLISY-FFQDNHHEMNHTTMEVPTLSQTLNIWQIIILFSMVGIIY 202 Query: 198 ---CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 + P+ +L P++ + +T L WLLA A + RIGL L+ Sbjct: 203 IGMSKINFPTKQLLAPIIVLIIWNMTTHLTFSLDHWLLATAQLIYMIRIGLQIAN--LMS 260 Query: 255 ALRPLPQILLSIFALLAICAG--MAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNA 312 L+ I ++ ++ I M G+ + +L +PGG+ + ++A + A Sbjct: 261 DLKGRIAIAIAFQNIMLIVTTFIMIIGIHLITNESINELFLGAAPGGMSQIVLVAMATGA 320 Query: 313 DMALIMAMQTLRLFSILLT-GPAIARFISTYAPKR 346 D+A+I + R+F IL P I FI+ + Sbjct: 321 DVAMISSYHIFRIFFILFVIAPLIGYFINVKLNNK 355 >UniRef50_A9BSE8 Membrane protein AbrB duplication n=8 Tax=Burkholderiales RepID=A9BSE8_DELAS Length = 364 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 22/337 (6%) Query: 26 PAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLA-VNWPIV 84 P +LGP+IA + S+ G Q I+G + T +++ +A + W I Sbjct: 32 PLPWMLGPLIATSLASILGAPTASAGRLRNGGQWIIGASLGLYFTPAVVQLIAGLWWAIA 91 Query: 85 LAILLVTLLSSAIVGWLLV----RYSSLPGN----TGAWGSSPGGAAAMVAMAQDYGADI 136 +AI+ LL WL R +P T + + G A+ M +A+ A Sbjct: 92 VAIVWALLLGWGFGAWLYRVHAPRMPQIPAGEMRATTYFAGAIGAASEMTLLAERENART 151 Query: 137 RLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ---HIVWFPPVSINLLLTILLAVVA 193 LVA LR++ V + + E + IV +P ++ LL +L + A Sbjct: 152 DLVAASHSLRLVIVTVSIPFALQWSGLHGLEGLTPPSIRIVEWPGLA---LLAVLTGLGA 208 Query: 194 GTVGCLLRLPS---GTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQ 250 + L R G +L+ ML + GQ ++ +P+ L+ +A + IG +G+ F ++ Sbjct: 209 WAMDRLKRANPWFLGALLVSML---LTMCGQELS-AVPQALVNVAQLVIGISLGVRFKRE 264 Query: 251 ILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGS 310 L A R L + + L+AICAG AW L + + ++T L TSPGG+ +A+ A Sbjct: 265 FLHTAPRWLGSVAVGTVGLMAICAGFAWLLHLAVDLPWVTLLLGTSPGGITEMAITAKVL 324 Query: 311 NADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 + ++ A Q RL ++LL + R++ P S Sbjct: 325 QLGVPVVTAFQVCRLIAVLLLVAPLFRWVEARGPAAS 361 >UniRef50_D1Y8H5 Membrane protein AbrB duplication n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8H5_9BACT Length = 353 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 84/296 (28%), Positives = 129/296 (43%), Gaps = 32/296 (10%) Query: 60 ILGCMIAQNLTGSILT-----TLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGA 114 ILG I +++ ++ +LA W +V+A + LL A+ G L + L Sbjct: 69 ILGQRIDRHMASAVRKMLLPVSLASFW-MVMASIATGLLLFAVAGGRLSLMTCLAS---- 123 Query: 115 WGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAV----- 169 SS GG A M A GAD+ +VAF Q +R++ + T + + AV Sbjct: 124 --SSAGGIAEMSIFAMSAGADVGIVAFFQSVRIIVLYATLPFSTGWLARRASGAVLPKAP 181 Query: 170 ---NQHIVWFPPVSINLLLTILLAVVAGTVGCLL---RLPSGTMLIPMLAGAV--LQSGQ 221 + V F P I A V G + L R PS M+ M V L+SG+ Sbjct: 182 APDAETRVSFTPGEIARF-----AAVTGALALLFEAARFPSAYMIGAMCGAGVMNLRSGK 236 Query: 222 LITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLT 281 ++T LP L + A + + I +G + + + S+ + A +AW + Sbjct: 237 VMT--LPPRLRSAAQICLSMTISVGLSPRTIHLVRELFFPLAFSVALIQAFSFLLAWIMH 294 Query: 282 RFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 R D MT+ LAT PGGL VA A +AD ++ +R+ SI++ P IAR Sbjct: 295 RLTRWDVMTSVLATCPGGLSQVAFFAEDLHADPLIVGVFHAVRMISIVVCVPLIAR 350 >UniRef50_C0VNM7 Ammonia monooxygenase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VNM7_9GAMM Length = 354 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 79/344 (22%), Positives = 149/344 (43%), Gaps = 15/344 (4%) Query: 13 SLLLSIGFLA------VHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 +L LS+ FL +HLP LLGP+ + + ++ SA +I+G + Sbjct: 8 ALSLSLAFLGALVAQWLHLPIPWLLGPLFTTALLKINHAPIECHNSARSIGLSIIGLTLG 67 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 T ++ +A +W ++L LL LL AI ++L R++ + T + S+ GGA M Sbjct: 68 LYFTPEMIHLIASHWLVLLIGLLFALLLGAIGAFILQRWAKVDFKTAWFASAIGGANEMS 127 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM--LGDNAEAVNQH--IVWFPPVSIN 182 +A+ Y A + VA LRVL V + M G + + + +H + WF S+ Sbjct: 128 HLAEHYQARVDQVASAHTLRVLMVVVIVPFFYQFMGWHGFDTDQIAKHLEVNWFGFFSL- 186 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 +L++ +A + +LP+ +L + + +P ++ + + +GW Sbjct: 187 ----VLISYIASRIFIQFKLPNPWTFGALLVAIFFTAQDIHLSAIPTPIIHLGQVLLGWS 242 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G F A R L + L L + +A+ L ++ + T L +PGG+ Sbjct: 243 LGNKFKPGFFKTAPRYLSIVALCNLGALFLTGLLAYTLMQWTDLPIATLGLGLAPGGVAE 302 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + + A + ++ A +R+ +L T + F K+ Sbjct: 303 MTITAKVLQLGVPIVTAFHVVRMVGVLGTVGYLYLFFDKILQKK 346 >UniRef50_UPI00019142C7 hypothetical protein Salmonellaentericaenterica_22939 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. AG3 RepID=UPI00019142C7 Length = 96 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/36 (91%), Positives = 34/36 (94%) Query: 284 MHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMA 319 M IDFMTAYLATSPGGLDTVA IAAGS+ADMALIMA Sbjct: 2 MQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMA 37 >UniRef50_B6AYQ5 Putative ammonia monooxygenase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AYQ5_9RHOB Length = 354 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 134/279 (48%), Gaps = 11/279 (3%) Query: 51 RSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPG 110 R+ F+A+ +G +I + L TL PI + L+VTL + + WL R+ G Sbjct: 61 RTPFIAS---IGLLIGAQVH---LETLTSWQPIAIIALMVTLFTP-LAHWLNYRFMQRFG 113 Query: 111 N----TGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNA 166 T + ++PGG + + + GA++ ++ Q+LR++ V L+ + +G Sbjct: 114 GYDVPTAFFCAAPGGLIEAMTLGERAGANVAILTVQQFLRIVLVVTLIPLLMSIWVGHPV 173 Query: 167 EAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIE 226 + + S L + + V +G +LR+P+G ++ PM+ +L S + + Sbjct: 174 GSAAGLSQFSQAASSPLWQIVTVGAVGYALGLMLRIPAGQLMGPMIFAGLLTSTGWLPLT 233 Query: 227 LPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHI 286 LP WL+ +A + IG +GL F+ R L L S +LA+ A +A +T + Sbjct: 234 LPNWLIILAQIVIGTTLGLRFNGLSGAIVRRGLILALGSAAVMLALGAVLALLITSLADV 293 Query: 287 DFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRL 325 A+L+ +PGG++ ++++A AD AL+ R+ Sbjct: 294 SLSAAWLSLAPGGVNEMSLVALSIAADPALVTLAHVYRI 332 >UniRef50_A8TWK7 Putative ammonia monooxygenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWK7_9PROT Length = 367 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 77/317 (24%), Positives = 139/317 (43%), Gaps = 13/317 (4%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPI 83 LP ++G M+A I S+ G +++ AILG M+ S++ + W I Sbjct: 45 KLPLPWMMGAMVATTIASVAGANIRVDYRLRTVMIAILGIMLGSAFQPSLIDRIG-EWTI 103 Query: 84 VLAILLV-TLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 +A LLV +++ ++ W + + T + SSPGG MV + ++ G D R++A Sbjct: 104 TIAGLLVYAIVAGSLCTWYFRKAAGYDAVTSYFASSPGGLNEMVIVGREMGGDDRIIALT 163 Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFP---PVSINLLLTILLA---VVAGTV 196 R+L V + ++ D A P + + LL +LA VV V Sbjct: 164 HSARILLVVMTLPFLFQLFT-DYTPAAG----LLPRGGSIDMPLLDWAILAGCGVVGAIV 218 Query: 197 GCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRAL 256 LR+P+ ++ PML A + + P L+A+A + +G IG F + + Sbjct: 219 AKRLRIPAAVLIGPMLLSAGIHVAGVTQATPPSLLVAIAQVVMGTGIGCRFAGTAVRDIV 278 Query: 257 RPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMAL 316 + + + S LL + + L + + + LA +PGGL ++++A D+A Sbjct: 279 KVVGVSIGSTVILLVLGVLFGFALQQITDVPWFVLVLAYAPGGLAEMSLVALALGRDVAF 338 Query: 317 IMAMQTLRLFSILLTGP 333 + R+ I++ P Sbjct: 339 VATHHIFRIGFIVILAP 355 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 1/162 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLA-AQA 59 MP+L W +L ++ +I + +PAA+L+GPM+ + G+T P S +A AQ Sbjct: 200 MPLLDWAILAGCGVVGAIVAKRLRIPAAVLIGPMLLSAGIHVAGVTQATPPSLLVAIAQV 259 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G I G+ + + + + ++ L+ + G+ L + + +P +P Sbjct: 260 VMGTGIGCRFAGTAVRDIVKVVGVSIGSTVILLVLGVLFGFALQQITDVPWFVLVLAYAP 319 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 GG A M +A G D+ VA R+ F+ A L R+M Sbjct: 320 GGLAEMSLVALALGRDVAFVATHHIFRIGFIVILAPLAFRIM 361 >UniRef50_Q0FTZ5 Putative ammonia monooxygenase n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FTZ5_9RHOB Length = 348 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 13/318 (4%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQ----AILGCMIAQNLTGSILT 75 F + +P + +LG M + S+ L+LP + A+ A++G M+ L Sbjct: 23 FTLIGMPLSWMLGAMTVTGVASV----LKLPVRGWSKARPPMSAVIGTMLGSQFGPHTLQ 78 Query: 76 TLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGAD 135 + A WP +L + L+++ + L R +L T + + PGG MV M + G D Sbjct: 79 SAAQWWPALLGLAGYLLVAATLSNIYLRRVVALDRPTAFFSAMPGGLIDMVLMGAEKGGD 138 Query: 136 IRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFP--PVSINLLLTILLAVVA 193 R +A M R+ V + L M L A+ Q W P ++I +L L A+ A Sbjct: 139 ERTIALMHSSRIFLVVLS--LPPLMTLITGADVGGQSAAWRPLANMAIGDVLWFLGALAA 196 Query: 194 G-TVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQIL 252 G T G L RLP+ ++ PMLA + + +P ++A+A + +G +G F Sbjct: 197 GATFGKLARLPAPFLIGPMLASMAVHWSGVSGFVVPSAVIAVAQVVLGTTVGCRFAGIST 256 Query: 253 LRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNA 312 R L L + LL++ A+ L + + LA +PGGL ++++A N Sbjct: 257 QRILHILLTSAGATAILLSVAVVFAFALQFVLDVPIEGVLLAFAPGGLAEMSLVALALNL 316 Query: 313 DMALIMAMQTLRLFSILL 330 +++ ++ R+ ++L Sbjct: 317 EVSFVVVSHICRIGMVIL 334 >UniRef50_C8RVR3 Membrane protein n=2 Tax=Corynebacterium jeikeium RepID=C8RVR3_CORJE Length = 385 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 99/363 (27%), Positives = 158/363 (43%), Gaps = 70/363 (19%) Query: 22 AVHLPAALLLGPMIA-GI--IFSMRGITLQLPRSAFLAAQAILGCMIAQNLTG-SILTTL 77 AV +PAA + +I GI IFS R ++ P+ A + +Q I+ + + LT T + Sbjct: 31 AVGVPAAWIFSFLIVFGIYAIFSDRQVSP--PKKAMIPSQVIIALLCSSPLTTIDFGTIV 88 Query: 78 AVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIR 137 + P ++ L+VTL + WLLVR + T + GGA+AMV ++++ AD R Sbjct: 89 SYAGPTAMS-LIVTLAVCLLASWLLVRIHRVGPATSVLATLAGGASAMVMLSRELNADTR 147 Query: 138 LVAFMQYLR----VLFVAGAAVLVTRMMLG--DNAEAVN--------------QHIV--- 174 V QYLR VL + G L+ R+ G D AE + Q IV Sbjct: 148 FVTLTQYLRVSIIVLTLPGLVTLLGRVEGGEADAAERASTGKESLLDGLQTNWQGIVGAV 207 Query: 175 ---------------WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQS 219 WF S LLL+I A++ G M+ + + + Sbjct: 208 VVGLAVWAFTRLTARWFSISSPYLLLSIAFAMI------------GVMVFGVPHEFIAPN 255 Query: 220 GQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWG 279 G L +AY +G + G K L + ++ LP IL I ++A G A+ Sbjct: 256 G---------LLEKLAYALVGVQAGGTLTKGALRQFVKALPVILGVIALMIASSIGTAFA 306 Query: 280 LTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTG---PAIA 336 + + AYLAT PGG+ V A + + ++ +Q +R+ ++L+ G P I Sbjct: 307 IAGLWDFKVLDAYLATVPGGIYAVLAFAHDAGSQ-PIVTVIQVMRMIAMLVVGAYAPQII 365 Query: 337 RFI 339 R++ Sbjct: 366 RWV 368 >UniRef50_C3KNJ9 Possible monooxygenase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNJ9_RHISN Length = 362 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 77/318 (24%), Positives = 142/318 (44%), Gaps = 17/318 (5%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 F HLP +LG ++A ++ S+ + + +P ++G ++ T ++ ++ + Sbjct: 32 FFYFHLPLPWMLGSLVACLVASLFNMPVAVPGIVRPPMLMLVGVVLGSGFTPAMAGSM-I 90 Query: 80 NWPIVLAILLVTLLSSAIVGWLLVRY-SSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 +W L IL+V ++ +A ++ R T + PGG M A+ YGA+ R Sbjct: 91 DWLPGLGILMVFVVLTAGCSYVYFRRVGGFDHWTAFFSGMPGGLVEMTALGDAYGANTRA 150 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH--IVWFPPVSINLLLTILLAVVAGTV 196 +A + R++ V V ++ G +++ V P+S L L + + Sbjct: 151 IALVHSSRIMLVVLTLPFVLTVVGGQTLAGISRSGASVLEAPISAELWL-FGTGLCGAVL 209 Query: 197 GCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF---DKQILL 253 G LL +PS ++ PMLA A + L P ++A A + +G +G F K +L Sbjct: 210 GRLLSMPSPFLMGPMLASAAVHLTGLSAFHAPWEIIAFAQLVLGSALGCSFAGVKKSSIL 269 Query: 254 RALRPLPQILLSIFA---LLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGS 310 LR LS+ + L+A A ++ ++ LA SPGGL +++A Sbjct: 270 HILR------LSVGSTAFLVAASTSCALLVSHLTGSPILSLLLAYSPGGLTETSLMALSL 323 Query: 311 NADMALIMAMQTLRLFSI 328 + D+A + LR+F + Sbjct: 324 HVDVAFVATHHVLRVFFV 341 >UniRef50_A3K1Y0 Putative ammonia monooxygenase n=3 Tax=Rhodobacteraceae RepID=A3K1Y0_9RHOB Length = 362 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 76/287 (26%), Positives = 136/287 (47%), Gaps = 13/287 (4%) Query: 59 AILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLV--RYSSLPGNTGAWG 116 A++G MI +T +L+ LA PI L+ L V + +A +G + + R T + Sbjct: 72 ALIGVMIGTQVTPDLLS-LAGELPITLSAL-VFFVVAAHLGNMTIFHRIGGYDKATALFS 129 Query: 117 SSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW- 175 +PGG + M + GAD R++ Q+LR++ V + + +G + + Sbjct: 130 GTPGGLMESIFMGESAGADTRVLTVQQFLRIILVITLLPVGLSLWIGHPVGSAAGLTIGG 189 Query: 176 -FPPVSINLLLTILLAVVAGT-VGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLA 233 PPV+ L I + V G +G +RLP+ + P+L A ++ + LP WL+A Sbjct: 190 DKPPVTPLALGMIAITAVLGLWIGRRIRLPAPQLTGPLLLAATATITGILDLHLPFWLIA 249 Query: 234 MAYMAIGWRIGL---GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMT 290 A + IG +G+ G D +L R+L LS+ +L + A L I F+ Sbjct: 250 TAQLVIGVSLGMRFKGVDAGLLRRSLW---LAALSVSYMLVLGMTFAIVLQHLTGIAFLH 306 Query: 291 AYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 +++ +PGG+ ++V+A A+ AL+ +R+ ++ P A+ Sbjct: 307 LFISFAPGGVAEMSVVALSLAANPALVSLHHVVRILITVVEMPLAAK 353 >UniRef50_B1VGV1 Putative membrane protein n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VGV1_CORU7 Length = 333 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 84/294 (28%), Positives = 129/294 (43%), Gaps = 37/294 (12%) Query: 88 LLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRV 147 L+VTL+ A WLL R + + G TG + GGA+ MV +A+D AD++ V QYLR+ Sbjct: 26 LVVTLVVCAFGAWLLHRVNGVDGATGLLATLAGGASGMVLIARDVRADVQFVTLTQYLRL 85 Query: 148 LFV----------------AGAAVLVTRMMLGDNAEAVNQHI----------VWFPP--- 178 + A V G+ A AV+ + W P Sbjct: 86 TVIVFTLPGLVAWLSTYSDAPGPDSVGPGSAGEAAGAVDPSLWDGVAAAAGSFWRTPWQG 145 Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIE--LPEWL-LAMA 235 V L + +L+ ++ L ++PS LI +A V + E LPE L + +A Sbjct: 146 VLGALAVGLLVWLIVKATAPLFKIPS-PYLIVSMAVVVAAIAAGVPQEFVLPEGLAVNLA 204 Query: 236 YMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLAT 295 Y IG + G K L + LP +L +F ++A W + D + AYLAT Sbjct: 205 YAIIGVQAGGTLTKGALRQFSAALPMLLGVLFLMVASSLATGWFIAWASDFDILDAYLAT 264 Query: 296 SPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTG---PAIARFISTYAPKR 346 PGG+ V A S +D L+ +Q LR+ +L+ G P + ++ +P R Sbjct: 265 VPGGVYAVLAFAHDSGSD-PLVTVVQVLRVLLMLIAGAFAPTVIDWLRRTSPTR 317 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 42/80 (52%) Query: 264 LSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTL 323 LS+ L +CA AW L R +D T LAT GG + +IA AD+ + Q L Sbjct: 24 LSLVVTLVVCAFGAWLLHRVNGVDGATGLLATLAGGASGMVLIARDVRADVQFVTLTQYL 83 Query: 324 RLFSILLTGPAIARFISTYA 343 RL I+ T P + ++STY+ Sbjct: 84 RLTVIVFTLPGLVAWLSTYS 103 Score = 41.6 bits (96), Expect = 0.045, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 3/99 (3%) Query: 57 AQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWG 116 A AI+G LT L + P++L +L + + SS GW + S Sbjct: 204 AYAIIGVQAGGTLTKGALRQFSAALPMLLGVLFLMVASSLATGWFIAWASDFDILDAYLA 263 Query: 117 SSPGGAAAMVAMAQDYGADIRLVAFMQYLRVL--FVAGA 153 + PGG A++A A D G+D LV +Q LRVL +AGA Sbjct: 264 TVPGGVYAVLAFAHDSGSD-PLVTVVQVLRVLLMLIAGA 301 >UniRef50_UPI0001C3846E membrane protein AbrB duplication n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3846E Length = 207 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 1/131 (0%) Query: 22 AVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVN 80 ++++P LLGPMI GI+ ++ + LP+S L QAI+ A + LT Sbjct: 55 SLNMPVGWLLGPMIVGILLALIWQKSTPLPKSFNLLGQAIVALTTATRFSPETLTLGKTY 114 Query: 81 WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVA 140 +L ++VT S G+LL R++ + TG G PG ++VA+++ GAD VA Sbjct: 115 ALPLLGCIVVTGAMSVCNGYLLWRWAKIDRTTGFLGCIPGAGPSLVAISEQMGADAIAVA 174 Query: 141 FMQYLRVLFVA 151 +QY+R+L VA Sbjct: 175 VLQYIRILLVA 185 >UniRef50_Q1UZU3 Possible AbrB protein n=4 Tax=root RepID=Q1UZU3_PELUB Length = 367 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 82/336 (24%), Positives = 151/336 (44%), Gaps = 41/336 (12%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPI 83 ++P A +LGPM+A + ++ G+ +++P+ A + +LG I + +++ + W Sbjct: 48 NIPLAWMLGPMLAVSVAALSGLKIKMPKLALSSILIVLGLHIGNYIDQNLINQMT-EWVW 106 Query: 84 VLAILLVTLLSSA-IVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 I+ V +L S IV L ++S T + ++PG ++ +A+ +D+ VA Sbjct: 107 TSIIMFVYILISILIVSKYLQKFSGYNVKTSIFSAAPGALGPLMILAEHEKSDLSQVATS 166 Query: 143 Q------------YLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLA 190 + V + A+ + + D H + I L+ +ILL Sbjct: 167 HLIRLIIIITVIPFFVVNYSTNEALTIEKFNYLDQ-----NHF----HLLILLIGSILLI 217 Query: 191 VVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQ 250 + +G L SGT++ A +LQ ++ + +LP+ + + +G +G F Sbjct: 218 FLFDKIGVPAALLSGTLV----ASGILQITEVASYKLPDESINFCLLILGASVGCRF--- 270 Query: 251 ILLRALRPLPQIL-LSIFALLAICAGMAWGL------TRFMHIDFMTAYLATSPGGLDTV 303 A + L ++ S +L+A +A GL T F+ +F+T L+ SPGG+ V Sbjct: 271 ----ADKSLKEVAGNSFHSLVATVILVALGLLAAIVATYFVDTNFLTLLLSFSPGGIYEV 326 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 AVIA + D + +RL IL T P I + I Sbjct: 327 AVIAIAFDLDPNFVAFHHIIRLLMILFTVPVILKII 362 >UniRef50_B6YYA2 Putative ammonia monooxygenase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYA2_9RHOB Length = 351 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 35/281 (12%) Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWL-LVRYSSLPGNTGAWGSS 118 +LG I +T +++ AV WP L ++L+ S ++ + LVR+ + SS Sbjct: 65 VLGTGIGSGVTPAVIDA-AVTWPASFLALGISLILSMLLSRMVLVRFFGFDAYNASLASS 123 Query: 119 PGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAV--NQHIVWF 176 PG + +++MA D AD+ + Q RVLF+ L ++ + + Q+I Sbjct: 124 PGHLSYILSMAADAKADVTRIGLAQSTRVLFLTICVPLFITLLFEETGASFLPAQNIT-- 181 Query: 177 PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 P+S LL L A V GT+ ++LP+ +L ML ++ + ++P+W ++ Sbjct: 182 -PLSAVYLL--LGAAVVGTIFLKMKLPAAYLLGGMLVSSLGHLTEFTPGKMPDWATLSSF 238 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTR-------------F 283 + +G IG F + + P +FA AICAG+A + Sbjct: 239 LVMGALIGTRF------KGISP------ELFA-KAICAGIAVTIITVGMAILGVLLAMPL 285 Query: 284 MHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLR 324 + ++ ++A +PGG++ +A IA S D + A R Sbjct: 286 VGLNPSLLFVAFAPGGVEAMAAIAVQSGLDPTFVAAHHVFR 326 >UniRef50_D0S7S8 Putative uncharacterized protein n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S7S8_ACICA Length = 352 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 15/281 (5%) Query: 58 QAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGS 117 Q I+G + T +++ +A W +L L +L+ ++ L R ++L T + S Sbjct: 63 QVIIGMALGLYFTPALVQAVAAYWGFILIGLAWSLVLGTLLAGLQYRVNALDWATAWFSS 122 Query: 118 SPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFP 177 + G A+ MV +A+ Y A + V LR++ + + M L E I Sbjct: 123 AIGSASEMVNIAERYQAQVEKVVAAHSLRIVVLVVLVPIF--MELYFQVEWTGLKI---- 176 Query: 178 PVS-----INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLL 232 PVS ++L LA+ G V L + +L P+ +L ++ ++LPEW Sbjct: 177 PVSDQFSFFQVVLLFGLALFVGKVFQFFNLLNAWILGPLAIIGLLSFCGILQMKLPEWFT 236 Query: 233 AMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWG--LTRFMHIDFMT 290 A + IGW +G F L + + + L IF LLA+ +++ L H + Sbjct: 237 AFGQVCIGWSLGSKFPFSFLKKNKKFIGITL--IFNLLALVLSISFALLLVNLSHTEKQI 294 Query: 291 AYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLT 331 L SPGG+ ++++A + +++A Q RL ++LT Sbjct: 295 LILGLSPGGIAEMSLMAKALGLAVPIVVAFQLSRLIFVILT 335 >UniRef50_B6ITE5 Ammonia monooxygenase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITE5_RHOCS Length = 378 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 8/320 (2%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 F +H+P A ++G +++ +M G+ + +PR A +LG M+ ++L L+ Sbjct: 40 FFLLHVPLAFMIGALVSVTAAAMAGVRVSVPRRLRTAMVVVLGIMLGSAFRPAMLEHLS- 98 Query: 80 NWPIVLA-ILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 W + L ++L T+ ++ L R + G T + + PGG MV M G D R Sbjct: 99 EWAVSLGGLVLYTVAAALAGLLYLRRVARYDGVTAYFTAMPGGFQEMVLMGAAMGGDDRT 158 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGT--- 195 +A +R++ +++ G A + + P I+L L + + A Sbjct: 159 IALAHSMRIMLTVLTVPFAFQLLPGFAPAARDWSLGGLGPGLIDLPLRDVALLAACALGA 218 Query: 196 -VGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 V LR+P+G ++ PML A + L + P L+A A + +G IG F + LR Sbjct: 219 PVAQRLRIPAGMLVGPMLLSAAVHLSGLTVGKPPGLLVAAAQVVVGAGIGCRF-VGVPLR 277 Query: 255 ALRPLPQILLSI-FALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 + + L + ALLA+ MA + +D LA +PGGL ++++A + D Sbjct: 278 TIVAVAAAALGLTVALLAVTVLMALSVHLLTGLDLAALILAYAPGGLAEMSLVALSLHVD 337 Query: 314 MALIMAMQTLRLFSILLTGP 333 A + R+ I++ P Sbjct: 338 AAFVATHHIARIVLIVIFAP 357 >UniRef50_C9KL73 Putative membrane protein AbrB duplication n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL73_9FIRM Length = 352 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 73/265 (27%), Positives = 126/265 (47%), Gaps = 6/265 (2%) Query: 80 NWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQD-YGADIRL 138 +P+++ +T+ + + WL+ R++ + + G PGG + MV +A + AD+ Sbjct: 78 QFPLMITATCITVAAGVLTAWLMFRHTKINFTSCLLGCVPGGLSQMVILADEIRDADLTA 137 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV-SINLLLTIL-LAVVAGTV 196 V MQ LR+L V +T +L ++ A S+ +LT +AV+ + Sbjct: 138 VTIMQTLRMLSVVFVIPFLTIHVLAGSSHAAASAGTAVHAAGSLAEILTYAAVAVLGAVL 197 Query: 197 GCLLRLPSGTMLIPMLAGA--VLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 + LP+ ML P+L+ A V+ +G + +P + A + +G IG D L + Sbjct: 198 AKKIHLPTAPMLGPILSTAAFVVITGTAAPV-VPVHYINAAQVLVGAYIGSSVDLTRLHQ 256 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 +L + +L + GM ++ D TA+LAT+PGGL + + A AD Sbjct: 257 YHGMGKVLLGGVLLVLLVSMGMGCIISEVTGTDLATAFLATAPGGLTEMGITALVVGADS 316 Query: 315 ALIMAMQTLRLFSILLTGPAIARFI 339 + ++A Q RL I+L P IAR I Sbjct: 317 STMVAYQLTRLLFIMLVFPYIARAI 341 >UniRef50_B8FR89 Membrane protein AbrB duplication n=4 Tax=Desulfitobacterium hafniense RepID=B8FR89_DESHD Length = 368 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 87/347 (25%), Positives = 151/347 (43%), Gaps = 47/347 (13%) Query: 8 MLCVLSLLLSIG--------FLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQ 58 ML +L L L IG F ++ PA ++GPM I GI + G +L + Q Sbjct: 1 MLFLLDLGLMIGLAVAGYGLFRKINFPAPSIMGPMMILGIYQVLGGGLPELSLTIVNILQ 60 Query: 59 AILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPG-NTGAWGS 117 ++G + + L L L I + TLLS+ G + + P T + + Sbjct: 61 IVIGLSLGARINDQKLADLGKVLRPSLVIAVWTLLST--FGMTFIIHQFTPNMATALFAA 118 Query: 118 SPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG-------------- 163 +PGG + M +A Y A + +V+ Q++R++ + L+ R + G Sbjct: 119 APGGISEMTVLALVYDAAVPIVSTYQFVRLVVIISVVPLIARWLQGRQKSKDLAVDQEPA 178 Query: 164 ---------DNAEAVNQHIVWFPPVSI----NLLLTILLAVVAGTVGCLLRLPSGTMLIP 210 ++++ PVS +L L+ + G + L P G ++ Sbjct: 179 GAVLGGADLEDSQGPESKTAQEQPVSALTTWQILPLYLIGTLGGLLLLALNFPGGGVIGA 238 Query: 211 MLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSI--FA 268 M A A+ + P ++ +A + IG IGL F +I+ R +R ++LL I F+ Sbjct: 239 MAALAITNVLFKKQYKFPNSVMQIALLGIGMSIGLEFSPEIV-RTIR---EMLLPIVGFS 294 Query: 269 LLAICAGMA--WGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 LL + + +A W + H D +T L+++PGGL+ + V+A AD Sbjct: 295 LLIVLSNLAVGWYIRHLTHWDMITCLLSSAPGGLNQMLVVAEEMKAD 341 >UniRef50_B6R4M6 Putative ammonia monooxygenase superfamily protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4M6_9RHOB Length = 367 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 3/223 (1%) Query: 119 PGGAAAMVAMAQDYGADIRLVAFMQYLRV-LFVAGAAVLVTRMMLGDNAEAVNQHIVWFP 177 PG A+AQ+ GA + + +Q +R+ L +A ++++ ++ G + Sbjct: 128 PGALGMTAALAQERGAPMDRIMIVQLVRLFLLIAVLPLIISSVVGGKEVIFTEANDAMSL 187 Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 + L+L +L+ V G L+ P+G + A A L S ++ LP WL Y+ Sbjct: 188 RDGLYLVLAVLICAVCGYAALKLKAPAGMLTGAFFASAALNSTGMLEFALPVWLATPCYI 247 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFAL-LAICAGMAWGLTRFMHIDFMTAYLATS 296 +G +GL + ++ L+P+ L +FA+ L++ G A + + I F +L+ + Sbjct: 248 LMGTNVGL-YIGKMDRNTLKPMLGTSLVVFAISLSVALGGAVVTSWALEISFDKVFLSFA 306 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 PGG++ + +I+ + D + Q R +L P + R++ Sbjct: 307 PGGMEAMLLISILLDIDPVFVATHQLARFMGLLAFMPIVTRYV 349 >UniRef50_B5JCA9 Putative ammonia monooxygenase superfamily n=3 Tax=Rhodobacteraceae RepID=B5JCA9_9RHOB Length = 357 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 76/335 (22%), Positives = 145/335 (43%), Gaps = 5/335 (1%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 + G+ L++ ++ F P L GP++A +I ++ G+ L + + ILG Sbjct: 4 KQGLTVALAVAGTVIFWWADFPLPFLFGPLVACVIGALAGMPLVAAGNVSQWMRTILGVA 63 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRY-SSLPGNTGAWGSSPGGAA 123 I +LT +++ L +A++ + +L A++G RY G T + + PGG Sbjct: 64 IGASLTPQVISELP-KMAASVALIPLFVLCIALLGVPFFRYVYRFDGVTAWYAAMPGGLQ 122 Query: 124 AMVAMAQDYGADIRLVAFMQYLR-VLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 MV ++ G D+R ++ + R ++ + A +++T++ D + Q PP Sbjct: 123 DMVMFGKEAGGDVRALSLIHATRLLIIITIAPIILTQVFDADIKNPIGQPASEIPPY--E 180 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L++ L A++ V LR+ M+ PM+ L +I P + A IG Sbjct: 181 LVIMALTAIIGWHVAKRLRIFGAPMIGPMILAGALSITGIINYRPPAEAILTAQFFIGIA 240 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G G+ L R + + + L + T + + A+LA +P G Sbjct: 241 LGAGYVGVTLADIRRDVAAGIFFVIILAILTFIFTEIATLIAAVPPVDAFLAFAPAGQAE 300 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 + V A AD+ ++ R+F +++ P AR Sbjct: 301 MTVFAIIVGADLGYVVVHHLSRVFLVVIGAPVAAR 335 >UniRef50_C5DA14 Membrane protein AbrB duplication n=2 Tax=Geobacillus RepID=C5DA14_GEOSW Length = 355 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 72/315 (22%), Positives = 138/315 (43%), Gaps = 41/315 (13%) Query: 50 PRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLL---SSAIVGWLLVRYS 106 P++ + +LG + T L T+A P ++ L+ T+L + I + +++ Sbjct: 48 PKALSNSGLIVLGTYFGLSFTKETLLTIA---PYIVPFLVATVLLIVINIINSIAVTKWT 104 Query: 107 SLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN- 165 + T + S PGG + MVA ++ A+ LV Q +R+L V V L + Sbjct: 105 HIDKVTSVFASVPGGLSEMVAASESLNANTALVTIFQTIRLLTVVFLVPTVVVHWLSGDA 164 Query: 166 ----------AEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLR--LPSGTMLIPMLA 213 A + + H WF LL+I A+ LLR +P+ ++ P+ Sbjct: 165 SSGSTTAQAAASSFDGHYTWF-------LLSIFGAL-------LLRNIIPAAYVVGPLAV 210 Query: 214 GAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIF----AL 269 AV+ + LP WL+ +A +++G +G ++I L ++ + F L Sbjct: 211 TAVMHVAGVNLPPLPVWLIILAQISVGINMG----ERITLEDIKLGGKFSWVYFLLALVL 266 Query: 270 LAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSIL 329 +A+ G + + TA L+ +PGGL + + A D A++ ++Q +RL ++ Sbjct: 267 IALSFGFGYVFAELTDLPLSTALLSLAPGGLVEMVLTAQTVGGDPAIVSSLQFVRLLLVI 326 Query: 330 LTGPAIARFISTYAP 344 + P + +++ P Sbjct: 327 IVVPNVLKWVFRKFP 341 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 13/145 (8%) Query: 191 VVAGTVGCLL-RLPSGTMLIPMLAGAVLQSGQLI-------TIELPEWLLAMAYMAIGWR 242 +VAG G L RL S IP + GA+ +G L+ + P+ L + +G Sbjct: 8 IVAGLTGLLFYRLHSP---IPWMLGAI--TGMLVWKTVIKRPVAAPKALSNSGLIVLGTY 62 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 GL F K+ LL + L++ L+ I + +T++ HID +T+ A+ PGGL Sbjct: 63 FGLSFTKETLLTIAPYIVPFLVATVLLIVINIINSIAVTKWTHIDKVTSVFASVPGGLSE 122 Query: 303 VAVIAAGSNADMALIMAMQTLRLFS 327 + + NA+ AL+ QT+RL + Sbjct: 123 MVAASESLNANTALVTIFQTIRLLT 147 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 3/128 (2%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCMIAQNLT-GSILTTLAVNWP 82 +PAA ++GP+ + + G+ L LP + AQ +G + + +T I +W Sbjct: 199 IPAAYVVGPLAVTAVMHVAGVNLPPLPVWLIILAQISVGINMGERITLEDIKLGGKFSWV 258 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 L L++ LS G++ + LP +T +PGG MV AQ G D +V+ + Sbjct: 259 YFLLALVLIALSFGF-GYVFAELTDLPLSTALLSLAPGGLVEMVLTAQTVGGDPAIVSSL 317 Query: 143 QYLRVLFV 150 Q++R+L V Sbjct: 318 QFVRLLLV 325 >UniRef50_D2LU31 Membrane protein AbrB duplication n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LU31_BACS4 Length = 359 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 26/235 (11%) Query: 101 LLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVT-R 159 LL ++ + T GS PGG MV ++ A LVA Q +R+L V VT Sbjct: 105 LLAKWIKVDRITSILGSIPGGLTEMVTASESLHARPSLVAIFQTVRLLTVLFVVPFVTIH 164 Query: 160 MMLGDNAEAV-------NQHIVWFPPVSINLLLTILLAVVAGTVGCLLR--LPSGTMLIP 210 + + E+ N+ I +L LL V+ G LR +P+G ++ P Sbjct: 165 LFTASDVESSFALENEGNEMI--------SLSWGYLLYVIPIVAGITLRNVMPAGIIIFP 216 Query: 211 MLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIF--- 267 + A+L L + LP +L +A + +G IG+G K I + L+ + + F Sbjct: 217 LAITALLNISSLELLPLPSIILIIAQIFVG--IGIG--KNIHFKDLKIGGKYCFAYFGLA 272 Query: 268 -ALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQ 321 AL+AI G+ L + TA L+ +PGGL + + AA AD A++ A+Q Sbjct: 273 LALIAISFGLGVILAALTSLSLSTAMLSIAPGGLIEMVLTAAAIGADPAIVSALQ 327 >UniRef50_C1TRS0 Membrane protein AbrB duplication n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRS0_9BACT Length = 162 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 8/151 (5%) Query: 194 GTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILL 253 G +G L R+PSG M+ M+AG ++ +E WL A++ + + I D + Sbjct: 15 GLIGHLCRMPSGIMVGGMIAGLAVKIAFAPDMESSRWLSAISQLLVAGAIVFNSD----V 70 Query: 254 RALRPLPQILLSIFALLAICAG----MAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 +++ LP ++ + G +A L+RF +D +T+ A+SPGGL + + A Sbjct: 71 SSVKSLPGMIPVAMGYSVVMLGFGVLVALALSRFFGMDILTSLFASSPGGLSGLGLAATE 130 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIARFIS 340 S+A+ L + R+ +L+ P +AR++S Sbjct: 131 SDANAPLALLFHVSRITLVLMVVPLLARYLS 161 >UniRef50_B9YZ45 Membrane protein AbrB duplication n=2 Tax=Betaproteobacteria RepID=B9YZ45_9NEIS Length = 347 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 82/323 (25%), Positives = 140/323 (43%), Gaps = 6/323 (1%) Query: 26 PAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVL 85 P L+GP++A + G++LQ PR A Q +G + T ++ L P +L Sbjct: 29 PLPWLVGPLLATAGGRLAGLSLQGPRWGRAAGQWAIGSALGLYFTPEVVRLLGGLLPYLL 88 Query: 86 AILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYL 145 L + + + LL R+S L + + S PGGA+ M +A+ +G + +VA L Sbjct: 89 PAALFAFVLAGLGALLLQRWSGLDHGSAFFASMPGGASEMANLAERHGVRVDMVAAAHSL 148 Query: 146 RVLFVAG--AAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLP 203 R+L V A+ + G + + +P LLL L + AG V LR P Sbjct: 149 RMLLVVTLIPALFTLSGVHGADLYHAAGRTLHYP----GLLLLGALGLAAGWVWSRLRQP 204 Query: 204 SGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQIL 263 + M+ P+L +L + + LP W +A + IG +G F A R L + Sbjct: 205 NPWMIGPLLVTVLLTASGIELSALPPWASPLAQLLIGCSLGSRFSPGFFRVAPRFLAAVA 264 Query: 264 LSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTL 323 S L+ A L ++ T L T+PGG+ + + A + ++ A Q Sbjct: 265 ASSGVLMLAAAAFGGALAWLAGLNPATVMLGTTPGGIAEMCLTAHALQLGVPVVTAFQVC 324 Query: 324 RLFSILLTGPAIARFISTYAPKR 346 R+ ++L + R+++ +R Sbjct: 325 RMLCVVLLTDPLYRYLAVRLARR 347 >UniRef50_B9KW55 Ammonia monooxygenase n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KW55_RHOSK Length = 341 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 84/311 (27%), Positives = 128/311 (41%), Gaps = 29/311 (9%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIV 84 +P +LG ++ I+S L R A A Q +LGC A LT ++L +AV P + Sbjct: 32 VPIGWVLGALLGAAIWSNSTGHGGLGRHARRAGQLVLGCATASILTPALLAEMAVALPAM 91 Query: 85 LAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQY 144 +V +L + R + + T P G A M +AQD GA + +V Sbjct: 92 ALAAVVAILVALGFAPAFSRLADVDRKTALLSVLPAGLAEMAGLAQDRGARVEVVTLAHT 151 Query: 145 LRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT-------ILLAVVAGTVG 197 +RV A VL +++G PP +L +T ++LA G Sbjct: 152 IRVT----ALVLTLPVLVGAARRP-------LPPAEGDLRVTLVCLGLSLVLAWAMNRAG 200 Query: 198 CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALR 257 L + +++P++ GA L LP W + A +AIG +G R R Sbjct: 201 FL----NPWIVLPVIVGAALTFAGFRLAALPPWAIVAAQVAIGGSLGSRLQVDRFARMPR 256 Query: 258 PLPQILLSIFALLA----ICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 L LLS L A + A + W + ID T LA +PGGL + A A Sbjct: 257 VLGAALLSTLLLYAGTALVLAPVCWWI---YDIDLATFALALAPGGLAEMLAAAKAIGAA 313 Query: 314 MALIMAMQTLR 324 + +++ Q LR Sbjct: 314 VPMVLGFQLLR 324 >UniRef50_D2RND1 Membrane protein AbrB duplication n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RND1_ACIFE Length = 356 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 9/308 (2%) Query: 50 PRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLP 109 PRS + G I N T L+ L L TL S V + R++ Sbjct: 48 PRSWRGLMLGVAGYGIGSNCTPDTFFKLSQETLGTLGASLFTLAVSVAVAVYMHRHTFAN 107 Query: 110 GNTGAWGSSPGGAAAMVAMAQDYG-ADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA 168 + G PGG AM + DY AD +V Q LR+ V + L+ + G Sbjct: 108 LLSSIMGCLPGGLTAMTVLMDDYEEADENVVVVSQCLRLFVVEISVPLLAINLFGGQVTR 167 Query: 169 VNQHIVWFPPVSINLLL-------TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQ 221 + +W + L L + + +V T+ + +P+G +L P++ A+L Sbjct: 168 LAGVGLWDASRADFLSLFHPGWLLVVPVVLVGQTLAKKIHMPTGQLLGPIMITALLALWM 227 Query: 222 LITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLT 281 +P +A A + IG IG D++ LL+ +P +LL ++A AG++ L+ Sbjct: 228 GRVPRVPAPAMAFAQLHIGLYIGTMLDREKLLKTRALIPNVLLGSLLMVASSAGLSLLLS 287 Query: 282 RFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGP-AIARFIS 340 R +TA+LA +PGG+ + + + D+A+I+ Q +R+ + + P I +F Sbjct: 288 RLYGFTTLTAFLALAPGGIAEMCLTGLEMHQDVAVILTYQLVRVLMLAMGVPFVIRKFFK 347 Query: 341 TYAPKRSA 348 K+ Sbjct: 348 PSGEKKQG 355 >UniRef50_A1AYU4 Putative ammonia monooxygenase n=5 Tax=Rhodobacteraceae RepID=A1AYU4_PARDP Length = 343 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 81/296 (27%), Positives = 131/296 (44%), Gaps = 33/296 (11%) Query: 58 QAILGCMIAQNLTGSILTTLAVNWPIVLAILLVT---LLSSAIVGWLLVRYSSLPGNTGA 114 + ILG + ++T +L L P V A LL + A+VG+ L R + A Sbjct: 59 RTILGVAVGASITPGVLAEL----PDVAASLLFVPGFIGVIALVGYPLFRRVFGFDHATA 114 Query: 115 W-GSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG-DNAEAVNQH 172 W G+ PGG M+ ++ G DIR ++ + RVL + A L+ G D ++ Sbjct: 115 WYGAMPGGLQDMLVFGEEAGGDIRALSLIHATRVLVIVTVAPLIMTAWWGVDLSQPPGT- 173 Query: 173 IVWFPPVSINLLLTILLAVVAGTVG----CLLRLPSGTMLIPMLAGAVLQSGQLITIELP 228 P+ I L V AG +G L + ++L PM+ A L LIT P Sbjct: 174 -----PMRATGAAEIALMVAAGLIGWKGAERLGIFGASILGPMVLTAALSLSGLITQRPP 228 Query: 229 EWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDF 288 ++ A IG +G+ + I LR LR L + A + +AW F+ + Sbjct: 229 AEMIQAAQFFIGIAVGVKY-AGITLRELR------LHVTAGIVYALLLAWISLIFIEVIV 281 Query: 289 -------MTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 + A+LA PGG + VIA + AD+A +++ LR+ +++ GP + + Sbjct: 282 HLRLAPGLDAFLAFLPGGQAEMVVIALIAGADLAYVVSHHLLRMIIVIVLGPVVGK 337 >UniRef50_D0DD06 Putative ammonia monooxygenase superfamily protein n=1 Tax=Citreicella sp. SE45 RepID=D0DD06_9RHOB Length = 354 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 7/324 (2%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQ 67 L V++ L + F V P ++GP+ IAG + + +T+ +P Q + + Sbjct: 10 LYVVAALAGVLFSRVGTPLPWMIGPLVIAGALSASGLVTVAVPIRTRPIGQVTIATFVGA 69 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 + T L +L P++L + L L+++ +V + R T +P Sbjct: 70 HFTPDALHSLLQTAPMLLTVSLFILVAAILVAQIQRRVYGTSTVTALLSVTPTSPVEAGV 129 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ--HIVWFPPVSINLLL 185 +A+ G + V Q R+ V + ++ A + H P L + Sbjct: 130 LAEHMGVNPGPVVLAQTARIALVVTVVPFLLQLGAPPGAAPLAPVLHHGSLP----GLAV 185 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 T+ A++ + LLR + L P+ A+ S L + E+P LLA+A + +G +G Sbjct: 186 TLGGALLGPVLFRLLRFSNPFFLGPLFLAALFSSVGLPSYEIPGPLLAIAQIVLGTWLGS 245 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 F +++L + + +LLS LL C AWGL+ F T L +PGG+ +A+ Sbjct: 246 SFRRELLEQRGALIGSVLLSSSLLLGACVLGAWGLSALFGAPFPTVMLGIAPGGVTEMAL 305 Query: 306 IAAGSNADMALIMAMQTLRLFSIL 329 A D+AL+ AM R+F I+ Sbjct: 306 TAGVLGQDVALVTAMHLTRIFVIM 329 >UniRef50_C1XST2 Membrane protein AbrB duplication n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XST2_9DEIN Length = 162 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 64/126 (50%) Query: 200 LRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPL 259 L LP G ++ M+ A Q + P + + +A G IGL F++++L A + L Sbjct: 21 LGLPGGPVVGTMIGTAAYQLFTPVKAITPNGMDLLVQLAAGILIGLSFNRELLHIAQQAL 80 Query: 260 PQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMA 319 P + + AL+ + AG+AW L R+ I +TA +PGG+ + V+A AL+ Sbjct: 81 PWAVGAALALIGLGAGLAWILDRYTGIGLVTALFGLAPGGVTGMGVLAQAEGGKPALVGV 140 Query: 320 MQTLRL 325 T+R+ Sbjct: 141 FHTVRI 146 >UniRef50_A3TX86 Putative uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TX86_9RHOB Length = 366 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 23/250 (9%) Query: 104 RYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG 163 RY T + +SPGG + + GAD+R + Q+LR++FV + + +G Sbjct: 129 RYDH---ATALFSASPGGLYESIMYGEQAGADMRQLMLAQFLRIIFVVTLLPVGMSLYIG 185 Query: 164 DNAEAVNQHIVWFPPVSI---NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSG 220 + + P +L + L+ V+ +G L LP+ +L P+L GAV+ Sbjct: 186 HPVGSAAG--LGLAPADTGLEHLPVAALVLVLGLVLGHRLHLPAAQLLGPLLLGAVVTLS 243 Query: 221 QLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQI------LLSIFALLAICA 274 ++LP W+L+++ + IG +G F +RP I +LS+ A++ I Sbjct: 244 GFAVLDLPNWMLSVSQIVIGTTLGTRF------VGIRPRMMINGAGLGILSVAAMMLIGT 297 Query: 275 GMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPA 334 MA L F ++ +PGG+ +A++A NA+ A + L+ I+LT Sbjct: 298 AMALVLRPLTGEHFDVLLISFAPGGVTEMALVALSLNANPAFVTLHH---LYRIILTVFV 354 Query: 335 IARFISTYAP 344 I Y+P Sbjct: 355 IGHAARRYSP 364 >UniRef50_B9E738 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E738_MACCJ Length = 296 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 7/138 (5%) Query: 210 PMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILL-SIFA 268 P++A +L+ P+WL + +G +IG F K+I+ L I+L SIF Sbjct: 40 PIIATVLLKKFTSREYRWPKWLSEIGLYILGAQIGASFTKEIVADIQDELLYIILISIFV 99 Query: 269 LLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA-AGSNADMALIMAMQTLRLFS 327 +L + +++ L RF++ TA LA+ PG L+ + V+A NA++ ++ QT R+ Sbjct: 100 IL-LAIMISFVLKRFLNCSLETAILASIPGALNQMIVMAEENKNANLLVVTLAQTSRILI 158 Query: 328 ILLTGPAIARFISTYAPK 345 ++LT P FIS+ P+ Sbjct: 159 VVLTVP----FISSLLPE 172 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 16/252 (6%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGII---FSMRGITLQLPRSAFLAAQAI 60 L + ++ + SLL + AVH+ L GP+IA ++ F+ R + P+ I Sbjct: 11 LNYIIIFIASLLTGLILSAVHVILPWLFGPIIATVLLKKFTSR--EYRWPKWLSEIGLYI 68 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG I + T I+ + ++ I + +L + ++ ++L R+ + T S PG Sbjct: 69 LGAQIGASFTKEIVADIQDELLYIILISIFVILLAIMISFVLKRFLNCSLETAILASIPG 128 Query: 121 GAAAMVAMAQD-YGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV 179 M+ MA++ A++ +V Q R+L V ++ ++ E V++ + P Sbjct: 129 ALNQMIVMAEENKNANLLVVTLAQTSRILIVVLTVPFISSLL----PEGVHRATISQTPS 184 Query: 180 SINLL--LTILL----AVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLA 233 + L TILL V+AG + + P M+ P+ + I +P L+ Sbjct: 185 MVEALNMQTILLLIGAMVIAGYLYRRIHFPVPDMMGPITVLMIWNLTTGINFMIPTPLII 244 Query: 234 MAYMAIGWRIGL 245 +A M G RIGL Sbjct: 245 LAQMFFGIRIGL 256 >UniRef50_A6CU26 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CU26_9BACI Length = 357 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 77/329 (23%), Positives = 153/329 (46%), Gaps = 18/329 (5%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGIT---LQLPRSAFLAAQAILGCMIAQNLTGSILTT 76 F +H+P A LLG M A +F++ +T + P I+G I Q+ + Sbjct: 19 FSLLHIPLAWLLGSMTA--VFAVEKMTSFKVYWPPIFRNTGLIIVGYTIGQSFSRDTAIE 76 Query: 77 LAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQD-YGAD 135 + P +L + ++ LL S+++ L+ + + + + G PGG + MV + ++ D Sbjct: 77 IVQQLPWMLFLTVLLLLFSSVLALLITKLTGVNLRSTITGCIPGGLSQMVVLGEELEDID 136 Query: 136 IRLVAFMQYLR---VLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVV 192 + +V +Q +R V+F+ + + + GD V+ +S+ LL+ +AV+ Sbjct: 137 VTVVTIIQVIRLVSVIFIV-PFMAFSPVFQGDKDGVVSAPAAVDFYLSLPLLILSGMAVL 195 Query: 193 AGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQIL 252 + + L+LP+ T+L P+L +L + + +P+ A +A +G+ F K + Sbjct: 196 SAVLAVKLKLPTPTLLGPILGIGILSASGIAAPHMPD----AAIIAAQILLGIYFSKMMK 251 Query: 253 LRALRPLPQILLSIFALLAICAGMAWGLTRFM----HIDFMTAYLATSPGGLDTVAVIAA 308 L + + A I +GL + I F+T++L+ +PGG+ +A++ Sbjct: 252 FEDSGSLSKFIGLTLATSVILIAFTFGLGAILMASHDITFITSFLSMAPGGMAEMALVGQ 311 Query: 309 GSNADMALIMAMQTLRLFSILLTGPAIAR 337 +AD+++I R+ IL P I + Sbjct: 312 ALHADLSIITGYHLFRILFILFAVPVILK 340 Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 4/151 (2%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQA 59 +P+L + VLS +L++ + LP LLGP++ I S GI +P +A +AAQ Sbjct: 184 LPLLILSGMAVLSAVLAV---KLKLPTPTLLGPILGIGILSASGIAAPHMPDAAIIAAQI 240 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +LG ++ + +L+ + LA ++ + + +G +L+ + T +P Sbjct: 241 LLGIYFSKMMKFEDSGSLSKFIGLTLATSVILIAFTFGLGAILMASHDITFITSFLSMAP 300 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFV 150 GG A M + Q AD+ ++ R+LF+ Sbjct: 301 GGMAEMALVGQALHADLSIITGYHLFRILFI 331 >UniRef50_B6WW29 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WW29_9DELT Length = 167 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 1/132 (0%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLA 78 F +H+P +LG ++A + M G + PR L AQ +G M+ +TG L + Sbjct: 18 FFFLHIPGGAMLGAVVAVLAVKMLGHVEADTPRLFQLGAQIAIGVMVGNMMTGGTLLEIR 77 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 P++ + +++ A+ W + R + L + +SPGG A+V MA D G + Sbjct: 78 AMAPLMFGSTALLIVAGALGAWFICRSAGLDAGSAILATSPGGLQAVVGMASDLGTNAPA 137 Query: 139 VAFMQYLRVLFV 150 V +R+ V Sbjct: 138 VLAFHLVRLYTV 149 Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 6/148 (4%) Query: 186 TILLAVVAGTVGCLL----RLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 T LL + G G LL +P G ML ++A ++ + + P A +AIG Sbjct: 3 TFLLLIACGIAGGLLFFFLHIPGGAMLGAVVAVLAVKMLGHVEADTPRLFQLGAQIAIGV 62 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGM-AWGLTRFMHIDFMTAYLATSPGGL 300 +G LL +R + ++ ALL + + AW + R +D +A LATSPGGL Sbjct: 63 MVGNMMTGGTLLE-IRAMAPLMFGSTALLIVAGALGAWFICRSAGLDAGSAILATSPGGL 121 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSI 328 V +A+ + ++A +RL+++ Sbjct: 122 QAVVGMASDLGTNAPAVLAFHLVRLYTV 149 >UniRef50_Q2CGP3 Possible AbrB protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGP3_9RHOB Length = 355 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/320 (26%), Positives = 144/320 (45%), Gaps = 21/320 (6%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIV 84 LP +LGPMIA + ++ + + P A A++G M+ + I+ + + W + Sbjct: 31 LPLPWMLGPMIANTLAAVVRLPVASPGRARPYVVAVIGVMLGAGFSPDIVDQIGL-WALS 89 Query: 85 LAILLVTLLSSAIVGWLLVRYSSLPGN----TGAWGSSPGGAAAMVAMAQDYGADIRLVA 140 L V + A+ G +++ Y G T + PGG M+ + ++ G D R + Sbjct: 90 FLFLAVYI---AVSGAVVIPYYRKVGGFDLPTAYFAGMPGGLNEMMIVGKEMGGDERAIV 146 Query: 141 FMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAG-TVGCL 199 R++ V + R++ G + +Q F + + LL +L+A V G +G L Sbjct: 147 LAHASRIVVVVALVAVWFRLIQGVDLTDRSQFGTPFADIPAHELLVLLVAGVVGFYLGKL 206 Query: 200 LRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG---LGFDKQILLRAL 256 LRLP+ +L PM+ A + L P+ L+ +A + +G IG +G + + RA Sbjct: 207 LRLPAPMLLGPMIVSAAVHLAGLTDSPPPQELVIVAQVFLGTIIGCRFIGAAPRAIGRA- 265 Query: 257 RPLPQILLSIFA---LLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 I LSI A +L + A LA SPGGL ++++A NAD Sbjct: 266 -----IGLSIGATVLMLVVTFVFAGAFHGLFGQTLEQVLLAYSPGGLAEMSLVALAMNAD 320 Query: 314 MALIMAMQTLRLFSILLTGP 333 +A + + R+ I+L P Sbjct: 321 IAYVASHHLFRISIIVLMAP 340 >UniRef50_Q167T9 Putative uncharacterized protein n=7 Tax=Rhodobacterales RepID=Q167T9_ROSDO Length = 365 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 75/332 (22%), Positives = 139/332 (41%), Gaps = 27/332 (8%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 F + LP L+GP+ A + ++ G ++ A + ILG + T +IL+ + Sbjct: 41 FHVLDLPLPWLIGPIAACLAAALMGFKMRAIAPVNAAMRTILGVAVGATFTPAILSLMVD 100 Query: 80 NWPIVLAILLVTLLSSAIVGWLLVRYSSLPGN---TGAWGSSPGGAAAMVAMAQDYGADI 136 W + L ++ V + A VG + + L G T + + PGG M+ ++ G + Sbjct: 101 MW-VTLLLIPVMICCVAAVG--VPYFQKLWGYDFATSYYSAMPGGLQDMLVFGEEAGGNP 157 Query: 137 RLVAFMQYLRVLFVAGA-AVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGT 195 R ++ + R+L + A L+ D + + P + ++L + A + Sbjct: 158 RTLSLIHATRILVIVTALPFLLQSFWSADLSTPPGAPLTSIAPGQLTVML--ICAALGWY 215 Query: 196 VGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRA 255 + L+ L ++L PM+ +++ + P + A IG +G+ + L Sbjct: 216 LANLVGLFGASILGPMIFAGAAAVTEVLIVRPPAEAIWAAQFFIGMTVGVKYSGITLDEV 275 Query: 256 LRPLPQ---------ILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 L ++ +F + AG+A G A LA +PGG +AV+ Sbjct: 276 RHDLAAGLGYCVVLLLITFVFVEIVYIAGLAPG---------REALLAFAPGGQAEMAVL 326 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 A ADMA ++A R+ I++ P ARF Sbjct: 327 ALIVGADMAFVIAHHVFRIIVIIIGAPLFARF 358 >UniRef50_A5L0B9 Ammonia monooxygenase n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L0B9_9GAMM Length = 243 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 48/257 (18%) Query: 17 SIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSI--L 74 S+ F +P + G +IA ++ + G TL LP+S Q ILG + GSI + Sbjct: 12 SLLFTYFEIPLGAMFGALIALLVTAKAGFTLALPKSTLTGVQLILGATV-----GSIVPV 66 Query: 75 TTLAVNWPIVLAILLVTLLSSAIVG---WLLVR-----YSSLPGNTGAWGSSPGGAAAMV 126 TL+ +PI+L + LV +S+ ++ WL R Y SL G+ PG AA++ Sbjct: 67 QTLSKGYPILLFVGLVLCMSALVLTSYLWLSKREKWSKYESL------LGAVPGAMAAVL 120 Query: 127 AMAQDYGADIRLVAFMQYLRVLF-VAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN--- 182 + +++ + V F +R++F + +A+LV+ DN+ P +S++ Sbjct: 121 VINENHNSPSSKVIFTHTVRLIFLIIASALLVST----DNSPVSG------PAISLDNLW 170 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEW-------LLAMA 235 +LL + LA +G + + P+ M+ MLA + S ELP + L+ +A Sbjct: 171 ILLPLFLAYFSGLLLDKIGTPAPYMVTGMLATMFVNS------ELPSYNFLVPTELVFIA 224 Query: 236 YMAIGWRIGLGFDKQIL 252 A+G IG+ ++ Sbjct: 225 TSALGALIGIRLKDRLF 241 >UniRef50_Q399M7 Putative ammonia monooxygenase n=2 Tax=Proteobacteria RepID=Q399M7_BURS3 Length = 347 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 57/115 (49%) Query: 211 MLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALL 270 +L G +++G L +E+P W + A + +G IG F + L LR L I +L Sbjct: 206 VLTGVFVRAGWLHDVEVPAWCVDAASVILGALIGAQFRQITLADGLRYGRTGLACIALML 265 Query: 271 AICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRL 325 + AWG+ R + +L+ +PG ++T+ ++A G ++ +++ RL Sbjct: 266 TVAGAFAWGMARLSGYGVLPLWLSYAPGAIETITIVAYGGGLNVVFVLSHHLTRL 320 >UniRef50_B2A0P8 Putative ammonia monooxygenase-like protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0P8_NATTJ Length = 383 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 93/358 (25%), Positives = 151/358 (42%), Gaps = 62/358 (17%) Query: 22 AVHLPAALLLGPMIAGIIFSMRGITLQLP---RSAFLAAQAILGCMIAQNLTGSILTTLA 78 + LPAA +LG ++ +I S+R + LQLP + L Q +LG M+ L + +L Sbjct: 35 KIKLPAAPVLGGVL--LIGSLRVMGLQLPFLPQPVVLGLQIMLGVMVGSRLDRQAMKSLK 92 Query: 79 VNWPIVLAILLVTLLSSAIV---GWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGAD 135 I L +L++ + I G+L+ S L T GSS GG M +A+D GAD Sbjct: 93 T---IALPAVLISTWAVTITLVFGFLIAAISGLETTTAILGSSIGGLPEMTVLAEDTGAD 149 Query: 136 IRLVAFMQYLRVL-------FV-----------------------AGAAVLVTRMMLGDN 165 V LRVL F+ A + T GDN Sbjct: 150 TVTVVMFHILRVLSTMLVFPFILSHFSRKSQAQANTTTSTDTTSYANYQQMGTSQSPGDN 209 Query: 166 AEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRL---PSGTMLIPMLAGAVLQSGQL 222 + N++ P I LLLT+ VAG G LL L P+G ++ M+ + + Sbjct: 210 GKTQNKYQKLNP---IKLLLTL---AVAGGFGGLLILVGVPAGGLVGGMVFIIIANYFEF 263 Query: 223 ITIELPEWLLAMAYMAIGWRIGLGFDKQI-------LLRALRPLPQILLSIFALLAICAG 275 +E+P A+ + +G IGL ++ +L +P ++LS+ LA G Sbjct: 264 -PVEVPPR-KALNWFLVG--IGLMVSNEVSPETMELILSGELVIP-LVLSVTLTLASSFG 318 Query: 276 MAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGP 333 +A+ + + ++ +LA++P G + A D + + RL ++ L P Sbjct: 319 VAYLINKLTGWEYTLCFLASAPAGFTVMTGFALNEGYDPVRVSLLHLSRLVTLKLVIP 376 >UniRef50_A5TXE3 Possible ammonia monooxygenase n=8 Tax=Fusobacterium RepID=A5TXE3_FUSNP Length = 363 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 2/141 (1%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLA-VNWP 82 HLPA + M F++ +P + Q+ G +I +T S + L + +P Sbjct: 224 HLPAGTMSCSMALVAYFNVETHKAYMPLTLRKIIQSFGGALIGAKVTLSDVIALKDLVFP 283 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 I+L I+ L++ VG+ L + + +T +SPGG + + MA+D GA+ VA M Sbjct: 284 IILIIIGFCLMN-VFVGFFLYKTTKFSLSTALLSASPGGMSDISLMAEDLGANGPQVASM 342 Query: 143 QYLRVLFVAGAAVLVTRMMLG 163 Q+LR +F+ G ++ +++ Sbjct: 343 QFLRAIFIVGVYPIIIKILFS 363 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 67/126 (53%), Gaps = 10/126 (7%) Query: 227 LPEWLLAMAYMAIGWRIGLGF---DKQILLRALRP--LPQILLSIFALLAICAGMAWGLT 281 LP + + +A G IG F D ++L + + P +L+ IF+ + +++ ++ Sbjct: 61 LPNYFKFLTQIATGTFIGSKFRSEDVKMLKKVIIPGMTMVVLMIIFSFI-----LSYLMS 115 Query: 282 RFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 F+ ID +T++ AT+PGG+ +++IA A+ + + +Q +RL S++ P + Sbjct: 116 TFLGIDNLTSFFATAPGGIMDISLIAYDFKANTSQVALLQLIRLISVISFVPFFTKKCYE 175 Query: 342 YAPKRS 347 + K++ Sbjct: 176 RSKKKN 181 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 78/337 (23%), Positives = 143/337 (42%), Gaps = 24/337 (7%) Query: 19 GFLA--VHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTT 76 G+LA +PAA +LG + IF++ LP Q G I + Sbjct: 29 GYLADKKKVPAAYMLGALFLVAIFNIFFNKAFLPNYFKFLTQIATGTFIGSKFRSEDVKM 88 Query: 77 LAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADI 136 L + ++++ ++ S I+ +L+ + + T + ++PGG + +A D+ A+ Sbjct: 89 LKKVIIPGMTMVVLMIIFSFILSYLMSTFLGIDNLTSFFATAPGGIMDISLIAYDFKANT 148 Query: 137 RLVAFMQYLRVLFVAGAAVLVTRMMLGDNA-------EAVNQHIVWFPPVS----INLLL 185 VA +Q +R++ V T+ + + + I V + L Sbjct: 149 SQVALLQLIRLISVISFVPFFTKKCYERSKKKNISLEQEIKNEIREEEKVEDKSEKSFLF 208 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQ---SGQLITIELPEWLLAMAYMAIGWR 242 TI++ ++ G +G LP+GTM M A + + L + + + IG + Sbjct: 209 TIIVGIIGGIIGYFSHLPAGTMSCSMALVAYFNVETHKAYMPLTLRKIIQSFGGALIGAK 268 Query: 243 IGLGFDKQILLRALRPLPQILLSI-FALLAICAGMA-WGLTRFMHIDFMTAYLATSPGGL 300 + L I L+ L P IL+ I F L+ + G + T+F TA L+ SPGG+ Sbjct: 269 VTLS--DVIALKDL-VFPIILIIIGFCLMNVFVGFFLYKTTKF---SLSTALLSASPGGM 322 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 ++++A A+ + +MQ LR I+ P I + Sbjct: 323 SDISLMAEDLGANGPQVASMQFLRAIFIVGVYPIIIK 359 >UniRef50_B4U2X4 Putative ammonia monooxygenase n=3 Tax=Streptococcus dysgalactiae group RepID=B4U2X4_STREM Length = 398 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 80/331 (24%), Positives = 146/331 (44%), Gaps = 18/331 (5%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPI 83 +PA ++G M+A + S+ ++ + AQ I G I Q+++ S L L Sbjct: 67 SIPAPFMIGSMVAVALASILTKQVEAISPMKIFAQIISGAYIGQSVSKSDLLNLPKLAKS 126 Query: 84 VLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQ 143 +++++ + L+ +G +LV L T PGG + MA D GA +VA +Q Sbjct: 127 IISLMALFTLNMLCLGLVLVYCFDLDPVTALLSCLPGGIMDVSLMAVDMGAKADIVATLQ 186 Query: 144 YLR-----VLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI----------NLLLTIL 188 R +L A A V R A+A + IV N + + Sbjct: 187 SARLIGMLLLLPAWVAFWVNR--FDPKAKATKKKIVKSASSQDTRPSRKEQLWNNVQVLS 244 Query: 189 LAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFD 248 +A + G +G L++P G +++ +L L+ + T ++P L +A + G IG F Sbjct: 245 IATIGGLIGLGLKIPVGALIVSLLFSTALKVLRQ-TSQMPSTLRYIAQVFAGSIIGTSFT 303 Query: 249 KQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAA 308 + LL+ R + ILL + + L I + + + +D +A A+SP G ++++A Sbjct: 304 QDSLLQMGRLIVPILLLLSSYLIINLFFGYIMYKKGILDLQSALFASSPAGATDISLLAG 363 Query: 309 GSNADMALIMAMQTLRLFSILLTGPAIARFI 339 DM I +Q R ++ P + +++ Sbjct: 364 ELGGDMPKIAGIQISRTLYTVVIMPLLVKWL 394 >UniRef50_Q8KVY0 RC210 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KVY0_9RHOB Length = 333 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 73/159 (45%) Query: 189 LAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFD 248 LA+ + +LR+ + L P+ A + P +L+ A + +G +G F Sbjct: 170 LAIAGAVLFKVLRISNPYFLGPLTFSAAAAAMDFHPTAFPPLMLSAAQVVLGTWLGSTFR 229 Query: 249 KQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAA 308 +++L R + S LLAI + A G+ + +D+ L +PGG+ +A+ A Sbjct: 230 RELLRNGRRLIAASAFSTLLLLAIVSAFAVGVAQISGLDWEVLVLGLAPGGVTEMALTAK 289 Query: 309 GSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 D+AL+ A Q R+F + P I + ++ + +R Sbjct: 290 FLGVDLALVTAFQLTRIFIFMPNIPWIVQLVARFEVRRH 328 >UniRef50_B3QBE9 Membrane protein AbrB duplication n=9 Tax=Bradyrhizobiaceae RepID=B3QBE9_RHOPT Length = 350 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 81/330 (24%), Positives = 135/330 (40%), Gaps = 11/330 (3%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 F LP L+ G MIA + G + LP LG + ++ +++ LA Sbjct: 24 FYWAQLPGGLITGAMIAVGAAGLAGRKMGLPPPLSHIVLMALGVSLGSVVSPTMVHNLA- 82 Query: 80 NWPIVLAILLV-TLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 ++P+ + +L V T ++ L R + SPG + ++ +A + AD+ Sbjct: 83 SYPVTIGLLAVATFCATFGSSIYLQRVHGWDRTSALLAGSPGALSQIIMLATERKADVPG 142 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGC 198 +A +Q +RV+ + A M+L A + + P + L+L +L+AV G V Sbjct: 143 IAVVQVMRVIILTSA----VPMLLALIGMAGHGALPSRGPEATPLVLAVLIAVAVG-VAL 197 Query: 199 LLRL---PSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRA 255 LLRL P+ M ML +VL G + LP+W A + IG IG F Sbjct: 198 LLRLVNFPASWMFGAMLGSSVLHGGGWVEGTLPQWAYLAALVGIGTLIGARFGAIKPRTI 257 Query: 256 LRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMA 315 L + L S +AI A + + +A SPG +D + +A + D Sbjct: 258 LSYIGAALGSFAVAIAISAVFVIAIMLTTPVKLNDLVVAFSPGAMDAMMALALTLHIDPV 317 Query: 316 LIMAMQTLRLFSILLTGPAIARFISTYAPK 345 + A R + + P I ++P Sbjct: 318 FVGAHHLSRFIYVSIVTPGIVHLFG-HSPD 346 >UniRef50_A8VW34 Beta-lactamase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW34_9BACI Length = 221 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 26/210 (12%) Query: 136 IRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ----------HIVWFPPVSINLLL 185 + L+ F +++ +LF + L + GD A A+ + H +W+ ++ Sbjct: 5 LSLLCFKRFVLLLFCFLSPFLFLYLFSGDPAIAMERPSGSDDSTLIHGLWY-------II 57 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 ++LA ++ LP+G M+IP+L VL +++P+ L +A +A+G +G Sbjct: 58 PVILAFRYASL-----LPAGIMIIPLLITIVLTVSPASILDVPDPLFLLAQLAVGTSLGR 112 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWG--LTRFMHIDFMTAYLATSPGGLDTV 303 Q + +A R + + ++ I A G L+ ++D TA L+ +PGG+ + Sbjct: 113 SIAIQDVFQAGRY--SLYYAGITVILILFSFASGYLLSVVTNLDLATAMLSAAPGGVIEM 170 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGP 333 + A +AD A++ A+Q R+ ILL P Sbjct: 171 VLTADMVDADPAVVTALQLTRILLILLFVP 200 >UniRef50_A3VX57 Putative uncharacterized protein n=4 Tax=Rhodobacteraceae RepID=A3VX57_9RHOB Length = 350 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 5/293 (1%) Query: 48 QLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVL-AILLVTLLSSAIVGWLLVRY- 105 + P+ L AI+G MI +T ++ T A ++ + A+ L L+ A+ G+ + R+ Sbjct: 54 RFPQKLRLMFIAIIGLMIGAQVTPALFTE-AHHYALTFGAVTLFVGLAHAM-GYTIFRHL 111 Query: 106 SSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN 165 T + S+PGG + + + GAD+ + Q+LR++ V A L + LG Sbjct: 112 GGYDPTTAFYASTPGGLYESIELGEAAGADVTRLMMQQFLRIIVVVTALPLGLSLWLGAP 171 Query: 166 AEAVNQHIVWFPPVS-INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT 224 + + P V +L L +L + +G LLRLP+G M PM A L ++ Sbjct: 172 VGSSAGMTMARPDVPWSDLPLIVLAGLGGLGLGHLLRLPAGQMTGPMALAAALSLSGWLS 231 Query: 225 IELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFM 284 ++P+WL+ MA + +G +G+ F LR L ++ A+L + G+A L Sbjct: 232 FDIPQWLVNMAQIVLGTALGMRFTGLSRSLLLRGAALALAAVGAMLTLGVGLALALHEMT 291 Query: 285 HIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 + +PGG+ +A++A A+ A + R+ +LT I R Sbjct: 292 GEAVDVLLITLAPGGVTEMALVALSLQANPAFVTIHHIYRIVLTVLTLGVITR 344 >UniRef50_Q1GD07 Putative ammonia monooxygenase n=2 Tax=Ruegeria RepID=Q1GD07_SILST Length = 342 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 23/316 (7%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 F A+ P+A L G A + ++ G+ +++P A +LG I ++T +L + A+ Sbjct: 23 FEAIGFPSAPLTGSAAAVSLAALFGLPIRMPVWLRTTAFVLLGINIGSSVTREMLAS-AL 81 Query: 80 NWPIVLAILLVTLLSSAIVGWL-LVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 WP+ +AIL V+L S + + L R+ A ++PG + ++A++ G Sbjct: 82 AWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAALAAAPGHLSYVLALSLSDGGQTSR 141 Query: 139 VAFMQYLRVLFVA-GAAVLVTRMMLGDNAEAVNQHIV--WFPPVSINLLLTILLAVVAGT 195 +A +Q +RVLF+ VLV+ + E + ++++ W +L + + +V G Sbjct: 142 IAVVQSIRVLFLTLCVPVLVSLVFGATGVELMPEYVLSNW------HLAALVGVTLVVGA 195 Query: 196 VGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF------DK 249 V L +P+ +L + A + PE +A++ +G IG F D Sbjct: 196 VFDRLNIPAAYLLAGIFCSAAGHIFAVTPGRPPEAATILAFLVMGTLIGSRFVGQRLADL 255 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 ++ A + I +++ L+AI M + M + +A +PGG++ +A IA Sbjct: 256 KVDFAAGLWVTGINVTV-TLIAIGVAM-----QVMGLSPALLIVAFAPGGVEAMAAIAVT 309 Query: 310 SNADMALIMAMQTLRL 325 D A + A +RL Sbjct: 310 LGLDPAFVAAHHVMRL 325 >UniRef50_B9Y4Q0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4Q0_9FIRM Length = 352 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 4/144 (2%) Query: 11 VLSLLLSIGF----LAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 V +LLLSIG A LPAA ++ PMIA + +P + AQ + G ++ Sbjct: 193 VFTLLLSIGLGYLGNASGLPAASMVFPMIAVAALNCTTSVCAVPLAIKNIAQLLAGSLVG 252 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 ++T + ++L+ V +LL + + + R L + + S+PGGA M Sbjct: 253 VSITAATFSSLSSTLVPVGLLLLSYWTVNGLYSGICKRTKLLDLKSAMFASAPGGATDMS 312 Query: 127 AMAQDYGADIRLVAFMQYLRVLFV 150 +A D GAD+ +A +Q LR +V Sbjct: 313 LIAADLGADLSQIALIQVLRAAYV 336 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 81/323 (25%), Positives = 140/323 (43%), Gaps = 33/323 (10%) Query: 24 HLPAALLLGPMIA----GIIFSMRGITLQLPRSAFLAAQAILGCMIAQNL-TGSILTTLA 78 LPA +LG M+A I+F LP + + AQAI G I + + Sbjct: 21 KLPAPAMLGSMLAVGLTNILFDYAA----LPMAVKVFAQAISGAFIGMQIGRKDVARMRG 76 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 + P +L +++T+ ++ +VG + + T GG + +A + AD+ Sbjct: 77 LIVPFLLLAVMLTV-NTFVVGIAIQKLCGWDWITALLSCVAGGVTDISLIAMEMDADVGT 135 Query: 139 VAFMQYLRV----LFVAGAAVLVTRMMLG----------DNAEAVNQHIVWFPPVSINLL 184 VA MQ R+ LF VTR D A ++ S ++ Sbjct: 136 VAMMQTARLVGVLLFFPYWIQFVTRHEPKTAPVTEEKPLDAAHTPLDRLI--STRSSRIV 193 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 T+LL++ G +G LP+ +M+ PM+A A L + +P + +A + G +G Sbjct: 194 FTLLLSIGLGYLGNASGLPAASMVFPMIAVAALNCTTSVC-AVPLAIKNIAQLLAGSLVG 252 Query: 245 LGFDKQI---LLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 + L L P+ +LLS + + + +G+ R +D +A A++PGG Sbjct: 253 VSITAATFSSLSSTLVPVGLLLLSYWTVNGLYSGIC---KRTKLLDLKSAMFASAPGGAT 309 Query: 302 TVAVIAAGSNADMALIMAMQTLR 324 +++IAA AD++ I +Q LR Sbjct: 310 DMSLIAADLGADLSQIALIQVLR 332 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 7/170 (4%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 +N +LT+L V + +LP+ ML MLA L + LP + A G Sbjct: 1 MNWVLTLLAGVAGWQLAARWKLPAPAMLGSMLAVG-LTNILFDYAALPMAVKVFAQAISG 59 Query: 241 WRIGLGFDKQILLRALRPL--PQILLSI-FALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 IG+ ++ + R +R L P +LL++ + G+A + + D++TA L+ Sbjct: 60 AFIGMQIGRKDVAR-MRGLIVPFLLLAVMLTVNTFVVGIA--IQKLCGWDWITALLSCVA 116 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 GG+ +++IA +AD+ + MQT RL +LL P +F++ + PK + Sbjct: 117 GGVTDISLIAMEMDADVGTVAMMQTARLVGVLLFFPYWIQFVTRHEPKTA 166 >UniRef50_B7RQ37 Membrane protein AbrB duplication n=4 Tax=Rhodobacteraceae RepID=B7RQ37_9RHOB Length = 347 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 13/167 (7%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQS-----GQLITIELPEWLL 232 P + L+T L V GT+G LL G + ++ AVL S G + I L L Sbjct: 4 PKPPSDLMTTALTVCVGTLGALLGWAVGAPIYLLVGPAVLVSLAGLAGLKMGISLS--LR 61 Query: 233 AMAYMAIGWRIGLGFDKQILLRALR-PLP--QILLSIFALLAICAGMAWGLTRFMHIDFM 289 ++ IG +G GFD+ L +R PL +L+ I+ ++ W L+RF D Sbjct: 62 NACFVVIGLAVGAGFDRSALDAMIRWPLAFVVVLVMIWVMMVFSR---WLLSRFFGFDRR 118 Query: 290 TAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 +A LA +PG L V +AA + ++ + Q++RL S+ L P +A Sbjct: 119 SALLAAAPGHLSFVLAMAAEAGDNVVRVSTTQSVRLLSLTLVVPFVA 165 >UniRef50_Q0RKZ8 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RKZ8_FRAAA Length = 620 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 3/127 (2%) Query: 23 VHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGCMIAQNLTGSILTT-LAVN 80 V +PA L+ P++ G ++ G + LP +QA+LG ++ L S L + L Sbjct: 88 VGVPAPQLVVPLLVGAFLALGGMVRRNLPAPTIRGSQAVLGVLMGSYLNISELRSVLGTA 147 Query: 81 WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVA 140 P+ A+ L T+ + L R S A G PGG+AA+VA A++ AD RLVA Sbjct: 148 LPLT-AVTLATIALCLLAALLFTRTSRGSVTDAALGMMPGGSAAIVACAEELRADSRLVA 206 Query: 141 FMQYLRV 147 QYLRV Sbjct: 207 LSQYLRV 213 >UniRef50_B8HRF2 Membrane protein AbrB duplication n=6 Tax=Cyanobacteria RepID=B8HRF2_CYAP4 Length = 365 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 21/311 (6%) Query: 36 AGIIFSMRGITLQLP---RSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTL 92 AG+ + + LP RSA +++G I +++ + L + + PI + L Sbjct: 35 AGLSYLYQTFNQPLPPPNRSARKVGLSLVGLTIGSSISQANLAPITSHLPIFALLTFFLL 94 Query: 93 LSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAG 152 LS + +G+ R S T + PGG M ++A DY ++ VA +Q +RV V Sbjct: 95 LSGSAIGYCYARLSGTNLLTALLATVPGGVGVMASLAADYDRNVTQVALVQIIRVTAVIL 154 Query: 153 AAVLVTRMMLGDNAEAVNQHIVW--FPPVSINLLLTILLAVVAG-TVGCLLRLPSGTMLI 209 L++ ++ G V W F P+++ LL LL A T+ L +P+ L Sbjct: 155 GIPLLSGLISGTGINRVVLQREWLSFEPIALGLLCLALLTTGATVTLAGRLGIPAAPFLA 214 Query: 210 PMLAGAVLQ------SGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRA---LRPLP 260 ++ G SG + P + + + +G IG + Q A R + Sbjct: 215 AVVVGTSFNPLLTQVSGLDLHFCPPLLVSVLGQILLGLTIGEYWGSQWQTPAQLGRRSIS 274 Query: 261 QILLSIFALLA---ICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALI 317 LS+ L+ + A +A LT + D++T L T+PGG + ++A N + + Sbjct: 275 GAFLSVMLTLSAGLLAAAIAHHLTTW---DWLTCLLVTAPGGAPEMILVALSMNHQVETV 331 Query: 318 MAMQTLRLFSI 328 A +RL +I Sbjct: 332 TAAHLVRLIAI 342 >UniRef50_C4ZKZ9 Membrane protein AbrB duplication n=1 Tax=Thauera sp. MZ1T RepID=C4ZKZ9_THASP Length = 352 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 71/311 (22%), Positives = 129/311 (41%), Gaps = 20/311 (6%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPI 83 HLP ++GP+ A M L+ Q +G + + ++ L+++ P+ Sbjct: 33 HLPLPWMIGPLFAVAGARMADRDLRPLPGGRQTGQWAIGAALGLYFSPEVVAQLSLHAPL 92 Query: 84 VLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQ 143 V+A L +L+ ++L+R + T + + PGGA+ M +A +G + +A Sbjct: 93 VIAAALGSLVLGMAYAFILLRLGGVDAPTAFFAALPGGASEMANLADRHGGAVDRIAAAH 152 Query: 144 YLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGC----L 199 +RV+ V V+ + V V+ P L V A +G L Sbjct: 153 AIRVMMV------VSVLPFALTFAGVQGSDVYVPLARDVDAQHFPLLVGASLLGVGAFKL 206 Query: 200 LRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPL 259 LR+ + +L P+L A+ + LP W++ + IG +G F + A R Sbjct: 207 LRIANAWVLGPLLGVALATLAGVPLSALPPWVVNGGQLLIGCALGCRFSRAFFRAAPR-- 264 Query: 260 PQILLSIFALL-AICAGMAWGLTRFM----HIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 +S+ AL A+ +A+ L + + T LAT+PGG+ + + A + Sbjct: 265 ---FMSVAALTGAMSIVLAFALATLLGLVAEVPLSTLALATAPGGVSEMCITAKVLQLGV 321 Query: 315 ALIMAMQTLRL 325 L+ LR+ Sbjct: 322 PLVTVCHVLRV 332 >UniRef50_C8S2H9 Putative ammonia monooxygenase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2H9_9RHOB Length = 370 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 14/274 (5%) Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G I T ++L + W +LA+ L + ++ + G+ + R L +T +GS P Sbjct: 87 VIGVAIGGAFTPAVLAQIPGWWASLLALCLY-IPAAHLCGFWIYRRGGLDRSTAFFGSVP 145 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG------DNAEAVNQHI 173 GG V + ++ GAD +++ +Q+LR++ A L + G A+ V + Sbjct: 146 GGLIESVTLGEEAGADGQMLVLLQFLRLILTIVAVPLAFMALTGHAVGSASGAKMVGASV 205 Query: 174 VWFPPVSINLLLTILLAVVAGTVGCL-LRLPSGTMLIPMLAGAVLQ-SGQLITIELPEWL 231 P+ +L A V G G LRLP+ M P++A A+L +G T+ P W Sbjct: 206 ----PLGWGDAAMLLAAGVGGFWGGRWLRLPAAIMTGPIIASALLHLAGGTQTVP-PAWA 260 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 + + IG +G F +R L + L + G A + + A Sbjct: 261 VGATQVVIGSVLGARFAGMPPGTLVRAARLALANAAVALVLALGFALAVGPLVGQPVAAA 320 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRL 325 +LA +PGGL +++IA + + A R+ Sbjct: 321 FLAFAPGGLAEMSLIALSLQMSVVYVTAHHVARI 354 >UniRef50_A8VW33 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW33_9BACI Length = 166 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 46/91 (50%) Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 +G GL F ++ L P + F L+AI +++ LT+ + ID ++ + PG Sbjct: 65 LGISFGLYFTIDTIVMTLPYFPIYIAMTFVLIAISVSLSYALTKLIPIDPASSIFGSIPG 124 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSIL 329 GL + + + +A+ A + QT+RL +L Sbjct: 125 GLTEMVITSQSFHANQAFVTVFQTIRLVIVL 155 >UniRef50_A8TSC8 Putative ammonia monooxygenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSC8_9PROT Length = 361 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 6/305 (1%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPI 83 H+P A LLG + A + G+ L +P Q +LG I T ++ +A + Sbjct: 31 HVPLAWLLGSLGAVAAAGLCGVGLSVPPGGRQVGQLLLGTAIGLTFTSAVAEAVAGYASV 90 Query: 84 VLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQ 143 ++ L+++ + + L R + + T + S PGG A M +A+ G + V+ Q Sbjct: 91 MVLAALLSITYGVVAAYTLRRSAKVDDATAFFASVPGGVAEMSILAERNGGETAPVSLAQ 150 Query: 144 YLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLP 203 LR+L V V ++ + + F P + + LA+ G + ++P Sbjct: 151 SLRILCVVITIPPVITVLGLTGIDPFEPSTLSFDP--MGFGALLTLALAGGGLLAWRKVP 208 Query: 204 SGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQIL 263 + +L PM ++ + + +P LL ++ + IG +GL + + LL R LP + Sbjct: 209 NAWLLGPMAVAVLVTATESHLSSMPTPLLNLSQVLIGATLGLRYRRDRLLALRRFLPSAI 268 Query: 264 LSIFAL--LAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQ 321 LS L L + G GL + + M LA SPGG+ +++ A + + ++ A Sbjct: 269 LSTVVLVGLNVATGAVIGLAVGLPVATMA--LALSPGGMAEMSITAKVLHLGVPIVSAFH 326 Query: 322 TLRLF 326 +R+F Sbjct: 327 VVRIF 331 >UniRef50_A8LSV3 Putative uncharacterized protein n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LSV3_DINSH Length = 342 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 82/326 (25%), Positives = 137/326 (42%), Gaps = 31/326 (9%) Query: 31 LGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLV 90 LGP+ A + +M G+ ++ + A + +LG + LT +L T WP L ++ V Sbjct: 29 LGPIFACLTAAMLGVPMRSLKPINEATRMVLGVAVGATLTPPVLATFPAMWP-TLMLVPV 87 Query: 91 TLLSSAIVGWLLVR--YSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVL 148 +++ +VG R + P T + + PGG M+ ++ G ++R ++ + RV Sbjct: 88 MVVAIGLVGVPYFRRLWGYDP-ATAYYSAMPGGLQDMLLFGEEAGGNVRTLSLIHATRVT 146 Query: 149 FVAGAAVLVTRMMLG---DNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSG 205 + A + + + G N + +V PV + L L A+V + L Sbjct: 147 VIVVALPFLLKGVWGADLGNPPGASLGVV---PVH-EMGLMGLCAIVGWWGARRIGLFGA 202 Query: 206 TMLIPML-AGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQ--- 261 +L PM+ GA SG L E + A + IG IG + R L Sbjct: 203 AILGPMIVTGAAAMSGLLENRPPAEAIWAAQFF-IGVTIGCKYVGITWGEIRRDLAAGLG 261 Query: 262 ------ILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMA 315 +L IF AG+A G M LA +PGG + V+A AD+A Sbjct: 262 FCGILIVLTLIFVEGVYLAGLAPG---------METLLAFAPGGQAELTVLALIVGADVA 312 Query: 316 LIMAMQTLRLFSILLTGPAIARFIST 341 ++A LR+F ++L P + R + Sbjct: 313 FVVAHHILRIFVVILGAPIVVRMLGD 338 >UniRef50_Q0FKP2 Putative uncharacterized protein n=2 Tax=Roseovarius RepID=Q0FKP2_9RHOB Length = 341 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 11/129 (8%) Query: 202 LPSGTMLIPMLAGAVLQS-GQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLP 260 +P+G ++ MLA A++ G +T+ P +A++ IG +G G D +L LP Sbjct: 29 VPAGALIGAMLAVALMAGLGHAVTV--PVIARDLAFLVIGISLGAGIDASVLPH----LP 82 Query: 261 QILLSIF----ALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMAL 316 +S+ AL+A A + L R +D+ TA LA++PG + IA D + Sbjct: 83 GWSISLLGLAVALVATMAASTFLLQRVFAVDWQTAVLASAPGTMSNAVAIAVEGKGDASG 142 Query: 317 IMAMQTLRL 325 +M +Q +RL Sbjct: 143 VMILQLMRL 151 >UniRef50_A4EFY2 Putative ammonia monooxygenase n=3 Tax=Bacteria RepID=A4EFY2_9RHOB Length = 350 Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust. Identities = 70/318 (22%), Positives = 124/318 (38%), Gaps = 4/318 (1%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIV 84 LP +LGPMIA +M P ++G M+ +T I L + Sbjct: 29 LPLPWMLGPMIANTAAAMLRAPTVGPDQLRPFVIPVIGVMLGSGVTAEIFGLLGTWVLTL 88 Query: 85 LAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQY 144 L + + ++ I + R T + + PGG M+ + + G D R +A Sbjct: 89 LLLPVFLACAAGISYAVYRRIGKYDPVTAFYSAMPGGLNEMLILGGEAGGDERRIALAHA 148 Query: 145 LRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILL---AVVAGTVGCLLR 201 RVL + L ++LG ++ + W I +L +L AV +G + Sbjct: 149 ARVLIIIIFVALFFGLILGVSSGG-RGTVQWIGLYEITMLDYAILGFCAVAGALLGRWIG 207 Query: 202 LPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQ 261 LP+ + PM+ + +T+ P + A + IG IG F L + Sbjct: 208 LPAAPVFGPMILSGIAHIAGWVTVAPPTIFVIAAQITIGTIIGTRFIGATLAEIRTDIGL 267 Query: 262 ILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQ 321 ++ +L G A + I A+LA SPGGL ++++ D+ + M Sbjct: 268 SAVASTLMLIAAVGFAELIVLISGIPLAQAFLAFSPGGLTEMSLLTLAMEQDVTYVSIMH 327 Query: 322 TLRLFSILLTGPAIARFI 339 +R+ ++ P + + I Sbjct: 328 IIRITLVIALAPFVFKLI 345 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 5/142 (3%) Query: 23 VHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 + LPAA + GPMI I + G +T+ P +AAQ +G +I G+ L + + Sbjct: 206 IGLPAAPVFGPMILSGIAHIAGWVTVAPPTIFVIAAQITIGTIIGTRFIGATLAEIRTD- 264 Query: 82 PIVLAILLVTLLSSAIVGW--LLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLV 139 I L+ + TL+ A VG+ L+V S +P SPGG M + D+ V Sbjct: 265 -IGLSAVASTLMLIAAVGFAELIVLISGIPLAQAFLAFSPGGLTEMSLLTLAMEQDVTYV 323 Query: 140 AFMQYLRVLFVAGAAVLVTRMM 161 + M +R+ V A V +++ Sbjct: 324 SIMHIIRITLVIALAPFVFKLI 345 >UniRef50_Q2JIQ1 Putative membrane protein n=2 Tax=Synechococcus RepID=Q2JIQ1_SYNJB Length = 166 Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 2/127 (1%) Query: 24 HLPAALLLGPMIA-GIIFSMRGITLQLPRSAF-LAAQAILGCMIAQNLTGSILTTLAVNW 81 LPA L+G M+A G++ I + P + A Q +LG ++ LT L L W Sbjct: 21 RLPAGALVGSMVAVGLVNVWGAIPIPAPPAGIRFAMQVVLGILLGTKLTADTLLALKDLW 80 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAF 141 L ++ + + + G+L+ R+ + T G++PGG + M +A D GA V Sbjct: 81 RPALLCTVIAVSTGVLSGYLISRWLGIERLTAILGTAPGGISDMSLIALDMGAQTSTVVV 140 Query: 142 MQYLRVL 148 M R++ Sbjct: 141 MHLARLI 147 Score = 42.4 bits (98), Expect = 0.025, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 9/152 (5%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI- 239 ++ L T+L+ + +G LRLP+G ++ M+A ++ I I P + A + Sbjct: 1 MSYLWTVLIGLAGALIGVKLRLPAGALVGSMVAVGLVNVWGAIPIPAPPAGIRFAMQVVL 60 Query: 240 GWRIGLGFDKQILLRALRPL--PQILLSIFALLAICAGMAWG--LTRFMHIDFMTAYLAT 295 G +G LL AL+ L P +L ++ +A+ G+ G ++R++ I+ +TA L T Sbjct: 61 GILLGTKLTADTLL-ALKDLWRPALLCTV---IAVSTGVLSGYLISRWLGIERLTAILGT 116 Query: 296 SPGGLDTVAVIAAGSNADMALIMAMQTLRLFS 327 +PGG+ +++IA A + ++ M RL S Sbjct: 117 APGGISDMSLIALDMGAQTSTVVVMHLARLIS 148 >UniRef50_C2LN52 Membrane-associated ammonia monooxygenase n=8 Tax=Enterobacteriaceae RepID=C2LN52_PROMI Length = 346 Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust. Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 29/336 (8%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC----MIAQNLTGSILTTLAVN 80 LP AL+ GP++ II L +P+ Q LG M Q GS A N Sbjct: 25 LPMALMFGPIVVVIIAYRFKWQLSVPKHTLTFIQLTLGTSVGLMFNQVHLGS-----ADN 79 Query: 81 WPIVLAILLVTLLSSAIVGWL-LVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLV 139 ++L IL++ L +V +L R+ G+ PG AA++A+ + + Sbjct: 80 LVLLLIILVICLAIQFVVSFLWFHRHIGWTKEEAMLGAVPGAMAAILALTDHTKTPPQKI 139 Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV----SINLLLTILLAVVAGT 195 +R++ + +++ ++G + + + + P + S+ LLL + L +V+G Sbjct: 140 VISHTIRLIVL----IIMAGFIVGSDKATLTEFTL--PEMTLLSSMWLLLIVALGLVSGL 193 Query: 196 VGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF----DKQI 251 + + P+ ML + + ++QS I P L ++ + IG IG F + Sbjct: 194 LLQKIHFPAPFMLTSLGSAILVQSFVSEPIAFPMLLNELSMVLIGMNIGAHFVVFPFASL 253 Query: 252 LLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSN 311 + A + +++++ L I A A LT + T LA +PG ++ + A N Sbjct: 254 IKNAFSSVQVVIINVI-LTVIVALSAAYLTG---APWTTLVLAWAPGSMEAMTFAAITMN 309 Query: 312 ADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 D A +M+ LR+ I+ + P+IA F S KR Sbjct: 310 VDAAFVMSNHILRML-IIQSIPSIALFYSERKQKRK 344 >UniRef50_B5JBC7 Putative ammonia monooxygenase superfamily n=2 Tax=Octadecabacter antarcticus RepID=B5JBC7_9RHOB Length = 336 Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 31/347 (8%) Query: 8 MLCVLSLLLS----IGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 M +++LL+S F+A+ LP LLGP++ +I ++ G+ LQ + + ILG Sbjct: 1 MALLMTLLISGLGVAAFMALGLPLPWLLGPLLGCLIAALFGVRLQGAPKSSQVMRTILGV 60 Query: 64 MIAQNLT-------GSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYS-SLPGNTGAW 115 + +T G+++ TLA+ P+V+ + VG+ L R T + Sbjct: 61 AVGATITPALFAQMGTLIWTLALMPPLVICV--------GAVGYPLFRKGFGFDHPTAFY 112 Query: 116 GSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW 175 S PGG M+ ++ G D+R ++ + RVL V V+V M + V Sbjct: 113 ASMPGGLQDMLLFGEEAGGDVRALSLIHATRVLIV----VMVLPFMFAYLYDVDMNQPVG 168 Query: 176 FPPVSI---NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLL 232 P +S+ LL+ ++ + L L ++L P+ A L I P + Sbjct: 169 EPFLSVPWTQLLILAAAGIIGWRIAAALGLFGASLLGPLFFTAALSLVGFIQHRPPAEAI 228 Query: 233 AMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAIC--AGMAWGLTRFMHIDFMT 290 A IG+ IG+ + I R LR + +F++L++C A A + R + F Sbjct: 229 QAAQFFIGFTIGVKY-AGISWRELR-VDVTAGVVFSVLSLCISAVFAAVVIRLGWLPFTE 286 Query: 291 AYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 + LA SPGG +A++A + AD A+++A +R+ +++ P + R Sbjct: 287 SVLAFSPGGQAEMAIVALVAGADAAVVVAHHLVRIVFVIIGAPLVNR 333 >UniRef50_Q0RKZ7 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RKZ7_FRAAA Length = 79 Score = 41.6 bits (96), Expect = 0.044, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 35/54 (64%) Query: 286 IDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 I F+ +YLAT+PGG++ V A ++ D+ ++ +Q+ RL ++L P + R++ Sbjct: 4 IAFLESYLATTPGGINAVLATATVAHVDVGVVSTVQSFRLVLVVLLTPPLVRWL 57 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75747 Protein abrB n=117 Tax=Bacteria RepID=ABRB_ECOLI 264 2e-69 UniRef50_C6DHB0 Membrane protein AbrB duplication n=5 Tax=Pectob... 232 1e-59 UniRef50_C4LFP7 Membrane protein AbrB duplication n=3 Tax=Proteo... 220 5e-56 UniRef50_C8SMW8 Membrane protein AbrB duplication n=5 Tax=cellul... 212 2e-53 UniRef50_B5ZWF3 Membrane protein AbrB duplication n=9 Tax=Alphap... 209 9e-53 UniRef50_Q48HD1 AbrB protein n=9 Tax=Gammaproteobacteria RepID=Q... 208 3e-52 UniRef50_Q11GX1 Putative ammonia monooxygenase n=1 Tax=Chelativo... 208 3e-52 UniRef50_A8TWK7 Putative ammonia monooxygenase n=1 Tax=alpha pro... 207 4e-52 UniRef50_B7KIK2 Membrane protein AbrB duplication n=3 Tax=Cyanob... 204 4e-51 UniRef50_A8ER15 Putative uncharacterized protein n=1 Tax=Arcobac... 204 6e-51 UniRef50_Q223M5 Putative ammonia monooxygenase n=1 Tax=Rhodofera... 203 7e-51 UniRef50_C0VNM7 Ammonia monooxygenase n=1 Tax=Acinetobacter sp. ... 203 7e-51 UniRef50_B4AWS0 Membrane protein AbrB duplication n=3 Tax=Cyanob... 203 7e-51 UniRef50_A6VSZ2 Putative ammonia monooxygenase n=1 Tax=Marinomon... 200 7e-50 UniRef50_B6ALI3 Putative ammonia monooxygenase n=2 Tax=Leptospir... 200 8e-50 UniRef50_Q2RP17 Putative ammonia monooxygenase n=4 Tax=Alphaprot... 197 4e-49 UniRef50_B8ELT3 Membrane protein AbrB duplication n=6 Tax=Rhizob... 197 5e-49 UniRef50_C6CTI7 Membrane protein AbrB duplication n=1 Tax=Paenib... 195 1e-48 UniRef50_Q1UZU3 Possible AbrB protein n=4 Tax=root RepID=Q1UZU3_... 195 2e-48 UniRef50_C8WDL2 Membrane protein AbrB duplication n=6 Tax=Zymomo... 192 1e-47 UniRef50_Q8ET66 Hypothetical conserved protein n=1 Tax=Oceanobac... 190 7e-47 UniRef50_B0UQK6 Membrane protein AbrB duplication n=9 Tax=Proteo... 189 1e-46 UniRef50_Q2BDN3 Putative uncharacterized protein n=1 Tax=Bacillu... 189 1e-46 UniRef50_Q2CGP3 Possible AbrB protein n=1 Tax=Oceanicola granulo... 189 1e-46 UniRef50_A1HS75 Putative ammonia monooxygenase n=1 Tax=Thermosin... 187 5e-46 UniRef50_B9YZ45 Membrane protein AbrB duplication n=2 Tax=Betapr... 186 8e-46 UniRef50_C6HYJ9 Putative ammonia monooxygenase n=1 Tax=Leptospir... 185 1e-45 UniRef50_A9BSE8 Membrane protein AbrB duplication n=8 Tax=Burkho... 185 2e-45 UniRef50_A8IB98 Putative ammonia monooxygenase n=1 Tax=Azorhizob... 185 2e-45 UniRef50_C5DA14 Membrane protein AbrB duplication n=2 Tax=Geobac... 185 2e-45 UniRef50_C9S1X9 Membrane protein AbrB duplication n=5 Tax=Geobac... 185 3e-45 UniRef50_C3KNJ9 Possible monooxygenase n=1 Tax=Rhizobium sp. NGR... 184 4e-45 UniRef50_B9R4Z7 Putative ammonia monooxygenase superfamily n=1 T... 183 8e-45 UniRef50_C4XND2 Hypothetical membrane protein n=1 Tax=Desulfovib... 183 9e-45 UniRef50_C0Z7B6 Conserved hypothetical membrane protein n=1 Tax=... 181 4e-44 UniRef50_Q4KE96 Ammonia monooxygenase family protein n=1 Tax=Pse... 180 7e-44 UniRef50_Q09A72 AbrB protein n=2 Tax=Cystobacterineae RepID=Q09A... 177 4e-43 UniRef50_Q167T9 Putative uncharacterized protein n=7 Tax=Rhodoba... 177 4e-43 UniRef50_D2RND1 Membrane protein AbrB duplication n=1 Tax=Acidam... 177 8e-43 UniRef50_C5SZI4 Membrane protein AbrB duplication n=1 Tax=Acidov... 176 1e-42 UniRef50_D1VJI4 Membrane protein AbrB duplication n=1 Tax=Franki... 175 3e-42 UniRef50_C9KL73 Putative membrane protein AbrB duplication n=1 T... 174 3e-42 UniRef50_B6ITE5 Ammonia monooxygenase, putative n=1 Tax=Rhodospi... 174 4e-42 UniRef50_Q9RC51 BH3837 protein n=3 Tax=Bacillus RepID=Q9RC51_BACHD 174 5e-42 UniRef50_C2AL91 Membrane protein AbrB duplication n=7 Tax=Coryne... 173 7e-42 UniRef50_C4LH35 Putative membrane protein n=1 Tax=Corynebacteriu... 173 7e-42 UniRef50_A6CU26 Putative uncharacterized protein n=1 Tax=Bacillu... 173 8e-42 UniRef50_B5JCA9 Putative ammonia monooxygenase superfamily n=3 T... 172 2e-41 UniRef50_D0DD06 Putative ammonia monooxygenase superfamily prote... 171 3e-41 UniRef50_Q0FTZ5 Putative ammonia monooxygenase n=1 Tax=Roseovari... 170 6e-41 UniRef50_A3K1Y0 Putative ammonia monooxygenase n=3 Tax=Rhodobact... 170 8e-41 UniRef50_O07568 Uncharacterized protein yhjN n=6 Tax=Bacillus Re... 170 8e-41 UniRef50_C2BYG7 Possible ammonia monooxygenase n=1 Tax=Listeria ... 170 1e-40 UniRef50_A4U1B8 Ammonia monooxygenase n=3 Tax=Magnetospirillum R... 169 1e-40 UniRef50_Q7D1Z3 Putative uncharacterized protein n=1 Tax=Agrobac... 169 1e-40 UniRef50_Q5HNN7 Membrane protein, putative n=14 Tax=Staphylococc... 169 1e-40 UniRef50_A8Z2I6 Possible ammonia monooxygenase n=51 Tax=Staphylo... 168 2e-40 UniRef50_A3VKP5 Putative uncharacterized protein n=1 Tax=Rhodoba... 168 3e-40 UniRef50_B1HT63 Protein abrB (AidB regulator) n=2 Tax=Bacillacea... 167 5e-40 UniRef50_A0NRD3 Putative uncharacterized protein n=1 Tax=Labrenz... 167 5e-40 UniRef50_A6TSB9 Putative ammonia monooxygenase n=1 Tax=Alkaliphi... 167 6e-40 UniRef50_B3QBE9 Membrane protein AbrB duplication n=9 Tax=Bradyr... 165 2e-39 UniRef50_D0L4U6 Membrane protein AbrB duplication n=1 Tax=Gordon... 164 3e-39 UniRef50_A3JPA2 Putative ammonia monooxygenase n=1 Tax=Rhodobact... 163 6e-39 UniRef50_A3TX86 Putative uncharacterized protein n=1 Tax=Oceanic... 163 6e-39 UniRef50_C0VV00 Ammonia monooxygenase n=2 Tax=Corynebacterium gl... 163 6e-39 UniRef50_D0S7S8 Putative uncharacterized protein n=1 Tax=Acineto... 163 9e-39 UniRef50_C6JLU4 Putative uncharacterized protein n=2 Tax=Fusobac... 162 1e-38 UniRef50_Q0S615 Possible ammonia monooxygenase n=2 Tax=Rhodococc... 162 1e-38 UniRef50_B6AYQ5 Putative ammonia monooxygenase n=1 Tax=Rhodobact... 161 4e-38 UniRef50_C6Q0M4 Membrane protein AbrB duplication n=1 Tax=Clostr... 160 5e-38 UniRef50_Q3IVJ5 AbrB protein (AidB regulator) n=3 Tax=Rhodobacte... 160 9e-38 UniRef50_A3VX57 Putative uncharacterized protein n=4 Tax=Rhodoba... 159 1e-37 UniRef50_D0RN43 Putative ammonia monooxygenase superfamily prote... 158 3e-37 UniRef50_Q1YFT4 Possible ammonia monooxygenase n=2 Tax=Aurantimo... 158 3e-37 UniRef50_B4U2X4 Putative ammonia monooxygenase n=3 Tax=Streptoco... 158 3e-37 UniRef50_A5TXE3 Possible ammonia monooxygenase n=8 Tax=Fusobacte... 157 7e-37 UniRef50_D2S6B3 Membrane protein AbrB duplication n=2 Tax=Actino... 156 1e-36 UniRef50_UPI0001AF51FB hypothetical protein MkanA1_02057 n=1 Tax... 155 2e-36 UniRef50_D2LU31 Membrane protein AbrB duplication n=1 Tax=Bacill... 154 4e-36 UniRef50_B6YYA2 Putative ammonia monooxygenase n=1 Tax=Pseudovib... 154 5e-36 UniRef50_A1T9W3 Putative ammonia monooxygenase n=1 Tax=Mycobacte... 153 8e-36 UniRef50_A9D2G7 Putative uncharacterized protein n=1 Tax=Hoeflea... 152 2e-35 UniRef50_B4AUN7 Membrane protein AbrB duplication n=1 Tax=Cyanot... 152 2e-35 UniRef50_C0XTR9 Ammonia monooxygenase n=1 Tax=Corynebacterium li... 152 2e-35 UniRef50_UPI0001C32335 membrane protein AbrB duplication n=1 Tax... 150 6e-35 UniRef50_A7IC16 Putative ammonia monooxygenase n=2 Tax=Xanthobac... 148 2e-34 UniRef50_C2AKB5 Membrane protein AbrB duplication n=1 Tax=Tsukam... 147 4e-34 UniRef50_B6R4M6 Putative ammonia monooxygenase superfamily prote... 146 9e-34 UniRef50_B8FR89 Membrane protein AbrB duplication n=4 Tax=Desulf... 144 4e-33 UniRef50_A1AYU4 Putative ammonia monooxygenase n=5 Tax=Rhodobact... 144 5e-33 UniRef50_A8LC15 Putative ammonia monooxygenase n=1 Tax=Frankia s... 143 1e-32 UniRef50_B9E738 Putative uncharacterized protein n=1 Tax=Macroco... 140 7e-32 UniRef50_C8RVR3 Membrane protein n=2 Tax=Corynebacterium jeikeiu... 138 2e-31 UniRef50_Q1GD07 Putative ammonia monooxygenase n=2 Tax=Ruegeria ... 137 9e-31 UniRef50_B2A0P8 Putative ammonia monooxygenase-like protein n=1 ... 136 2e-30 UniRef50_A5G1A0 Putative ammonia monooxygenase n=1 Tax=Acidiphil... 133 6e-30 UniRef50_UPI0000383818 COG3180: Putative ammonia monooxygenase n... 133 7e-30 UniRef50_B8HRF2 Membrane protein AbrB duplication n=6 Tax=Cyanob... 133 7e-30 UniRef50_D1Y8H5 Membrane protein AbrB duplication n=1 Tax=Pyrami... 132 2e-29 UniRef50_C8NRG7 Transport protein n=13 Tax=Corynebacterium RepID... 131 5e-29 UniRef50_B9Y4Q0 Putative uncharacterized protein n=1 Tax=Holdema... 128 4e-28 UniRef50_B9KW55 Ammonia monooxygenase n=1 Tax=Rhodobacter sphaer... 127 7e-28 UniRef50_B7RQ37 Membrane protein AbrB duplication n=4 Tax=Rhodob... 125 2e-27 UniRef50_B1VGV1 Putative membrane protein n=1 Tax=Corynebacteriu... 122 2e-26 UniRef50_Q8KVY0 RC210 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KVY0_9RHOB 122 2e-26 UniRef50_C9YG31 Protein abrB n=1 Tax=Curvibacter putative symbio... 117 5e-25 UniRef50_Q399M7 Putative ammonia monooxygenase n=2 Tax=Proteobac... 110 1e-22 UniRef50_Q0RKZ8 Putative uncharacterized protein n=1 Tax=Frankia... 106 1e-21 UniRef50_A8VW34 Beta-lactamase n=1 Tax=Bacillus selenitireducens... 105 3e-21 UniRef50_UPI0001C3846E membrane protein AbrB duplication n=1 Tax... 99 2e-19 UniRef50_A5L0B9 Ammonia monooxygenase n=1 Tax=Vibrionales bacter... 88 4e-16 UniRef50_C1XST2 Membrane protein AbrB duplication n=1 Tax=Meioth... 79 3e-13 UniRef50_C1TRS0 Membrane protein AbrB duplication n=1 Tax=Dethio... 77 7e-13 UniRef50_B6WW29 Putative uncharacterized protein n=1 Tax=Desulfo... 73 2e-11 Sequences not found previously or not previously below threshold: UniRef50_A4EFY2 Putative ammonia monooxygenase n=3 Tax=Bacteria ... 169 2e-40 UniRef50_C4ZKZ9 Membrane protein AbrB duplication n=1 Tax=Thauer... 156 1e-36 UniRef50_A8LSV3 Putative uncharacterized protein n=1 Tax=Dinoros... 155 2e-36 UniRef50_A8TSC8 Putative ammonia monooxygenase n=1 Tax=alpha pro... 153 1e-35 UniRef50_A6FPC2 Ureidoglycolate hydrolase n=1 Tax=Roseobacter sp... 148 3e-34 UniRef50_C1DL52 Ammonia monooxygenase n=3 Tax=Pseudomonadaceae R... 146 1e-33 UniRef50_C3K9K9 Putative transmembrane protein n=1 Tax=Pseudomon... 138 3e-31 UniRef50_A6VAM6 Membrane protein, putative n=20 Tax=Pseudomonas ... 138 3e-31 UniRef50_C8S2H9 Putative ammonia monooxygenase n=1 Tax=Rhodobact... 134 4e-30 UniRef50_B5JBC7 Putative ammonia monooxygenase superfamily n=2 T... 133 1e-29 UniRef50_C2LN52 Membrane-associated ammonia monooxygenase n=8 Ta... 126 2e-27 UniRef50_A8MLZ6 Conserved hypothetical membrane-spanning protein... 122 2e-26 UniRef50_Q5LXH6 Membrane protein, putative n=2 Tax=root RepID=Q5... 121 2e-26 UniRef50_Q0FKP2 Putative uncharacterized protein n=2 Tax=Roseova... 118 3e-25 UniRef50_Q1I8F5 Putative ammonia monooxygenase n=1 Tax=Pseudomon... 113 6e-24 UniRef50_A6D2G3 Putative uncharacterized protein n=1 Tax=Vibrio ... 109 2e-22 UniRef50_D2YM36 Protein abrB n=35 Tax=Vibrio RepID=D2YM36_VIBMI 95 5e-18 UniRef50_Q1AVE7 Putative ammonia monooxygenase-like protein n=1 ... 85 3e-15 UniRef50_Q2JIQ1 Putative membrane protein n=2 Tax=Synechococcus ... 72 3e-11 UniRef50_A8VW33 Putative uncharacterized protein n=1 Tax=Bacillu... 68 5e-10 UniRef50_B7A529 Membrane protein AbrB duplication n=3 Tax=Thermu... 59 2e-07 UniRef50_A5GHQ3 Uncharacterized AbrB family conserved membrane p... 51 5e-05 UniRef50_UPI000186D3F5 sodium antiporter, putative n=1 Tax=Pedic... 51 7e-05 UniRef50_Q0RKZ7 Putative uncharacterized protein n=1 Tax=Frankia... 50 1e-04 UniRef50_A6QBE6 Thiol:disulfide interchange protein DsbD n=1 Tax... 42 0.036 >UniRef50_P75747 Protein abrB n=117 Tax=Bacteria RepID=ABRB_ECOLI Length = 348 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 348/348 (100%), Positives = 348/348 (100%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI Sbjct: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG Sbjct: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS Sbjct: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG Sbjct: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL Sbjct: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA Sbjct: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 >UniRef50_C6DHB0 Membrane protein AbrB duplication n=5 Tax=Pectobacterium RepID=C6DHB0_PECCP Length = 352 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 174/343 (50%), Positives = 242/343 (70%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P +QWG+L +SL L G H+PAALLLGPM+ G++ + G T+++P F + A+L Sbjct: 6 PWMQWGILLSVSLSLGFGLQVYHVPAALLLGPMMVGVVMGLNGATIRIPPVCFAGSNAVL 65 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 GC++AQ+L+ SILT L WP+VL ILL TL +S + GWLLV++S LPG TG WG+SPGG Sbjct: 66 GCLVAQSLSFSILTPLLNEWPLVLFILLATLAASGLSGWLLVKFSELPGTTGTWGASPGG 125 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+AMVAM+ ++GAD+RLVAFMQYLRVL V +A V R+ LGD A + +VWFP + Sbjct: 126 ASAMVAMSGEFGADVRLVAFMQYLRVLMVTASAAFVARLSLGDEAAENSAMLVWFPSLDW 185 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 L T+ +A + + +R+PSG +L PM+ G++L + + ++ PEWLLA+AY IGW Sbjct: 186 RFLATLGVAFGSAWLARRMRIPSGALLGPMIIGSMLHASGTLHLQTPEWLLALAYAVIGW 245 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +GL F + I L A+R LP ++ SI L+ +C GMAW +T+ M +D +TA+LATSPGGLD Sbjct: 246 SVGLCFTRPIFLLAIRTLPHMMASIVGLMLLCGGMAWMVTKMMPVDMLTAFLATSPGGLD 305 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 ++A+IAAGS DMA ++AMQTLRLFS L+ P ++RFIS Sbjct: 306 SIAIIAAGSRVDMAFVIAMQTLRLFSTLVFSPILSRFISRRVE 348 >UniRef50_C4LFP7 Membrane protein AbrB duplication n=3 Tax=Proteobacteria RepID=C4LFP7_TOLAT Length = 362 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 175/342 (51%), Positives = 243/342 (71%), Gaps = 2/342 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 PV QW +L VLS + + +HLP ALLLGPM+AGI++S+ G TLQ+P + F+AAQAI+ Sbjct: 13 PVFQWILLIVLSAVFAFLMELIHLPGALLLGPMLAGIVWSLHGGTLQVPLNLFVAAQAII 72 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 GC++AQ+++ +L+T A +W + L I+L T+ +S+++GW++ + LPG T WGSSPG Sbjct: 73 GCLVAQSISSGMLSTFAQHWLLFLLIVLSTIAASSLMGWVISKLKVLPGTTAIWGSSPGA 132 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 AAAMV MA+++GAD RLVAFMQYLRV+ VA AA ++ R + D + I+WF P+ Sbjct: 133 AAAMVLMAEEFGADARLVAFMQYLRVIVVASAASVIARFWV-DTSGTTAAAIIWFSPLQW 191 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 T+LLA+ + L R+PSG ML+PM+ G LQS QL+ I+LPEWLL++AY +GW Sbjct: 192 ATAETLLLALAGIIIARLARIPSGAMLVPMILGMALQSSQLMKIDLPEWLLSIAYALMGW 251 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 RIGLGF + +L A R LPQI+LSI L+ C G+AW L H+D +TAYLATSPGG+D Sbjct: 252 RIGLGFTRAVLKHAFRALPQIILSIVLLIGFCGGLAWLLAEHFHLDPLTAYLATSPGGMD 311 Query: 302 TVAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFISTY 342 T+AVIAA S N D+ +MA+QT+RLF ++ GP +AR I+ Sbjct: 312 TIAVIAATSQNVDLEFVMALQTVRLFLVIFLGPVLARLIARK 353 >UniRef50_C8SMW8 Membrane protein AbrB duplication n=5 Tax=cellular organisms RepID=C8SMW8_9RHIZ Length = 366 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 149/340 (43%), Positives = 217/340 (63%), Gaps = 1/340 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 QW +L +S L + LPAALL+GPM+A I G T+++PR F +AQAI+G Sbjct: 23 PWQWLVLLTISALFAGALELAALPAALLIGPMLAAIAAGTNGATVRVPRLLFGSAQAIVG 82 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 C++A +++ I WP+ L ++ T+ +S+++GWL+ R+ LPG T WGSSPG A Sbjct: 83 CLVAASISADIFPVFYREWPLFLGAVVATVAASSLLGWLISRWRILPGTTAVWGSSPGAA 142 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 AMV MA +GAD RLVAFMQYLRV+FV+ A LV +M + + + + + P + Sbjct: 143 TAMVLMAGAFGADQRLVAFMQYLRVIFVSVTAALVAKMWVDTSGIEIPPIVWFPPIDAQA 202 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 TI +A+V G G L RLPS L + G V+ G + ++LP WLLA++Y +GW Sbjct: 203 FAATIGIAIVGGLAGKLCRLPSPFFLGTFIFGTVIHLGLGVEMQLPPWLLAVSYAMVGWS 262 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGL F + IL A R LPQI+ SI AL+A C G+A+ ++ + ID +TAYLATSPGG+D+ Sbjct: 263 IGLNFTRPILRHATRALPQIIASIVALIAFCGGLAFLISHLLGIDPLTAYLATSPGGMDS 322 Query: 303 VAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFIST 341 VA+IAA + N D++ +MA+Q+ R +LL GP++AR ++ Sbjct: 323 VAIIAAAARNVDISFVMALQSARFLVVLLVGPSVARLVAR 362 >UniRef50_B5ZWF3 Membrane protein AbrB duplication n=9 Tax=Alphaproteobacteria RepID=B5ZWF3_RHILW Length = 367 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 147/341 (43%), Positives = 205/341 (60%), Gaps = 2/341 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR--GITLQLPRSAFLAAQAILG 62 +W +L LS L + LPA+LL+GPM A I+ ++ L++P Q ++G Sbjct: 20 KWALLLALSTALVVFLELFALPASLLIGPMAAAILLALTVGKGKLRIPVWPLQFGQVLVG 79 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 M+A+ +T IL T+A + P+ L + + + +GWLL R+ LPG T WGSSPGGA Sbjct: 80 LMMARTITPDILGTMAKDAPLFLLFIFSVIAIATGLGWLLTRWQVLPGTTAVWGSSPGGA 139 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 +AMV M++ YGAD RLVAFMQYLRV+FVA A +++R+ + + I++ Sbjct: 140 SAMVIMSEAYGADARLVAFMQYLRVVFVAVGASVISRLWVAADGAEPPPLILFPEVDWPA 199 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 TI A + LR+ GT+++P+ GA LQ L+ IELP WLLA+AY +GW Sbjct: 200 FAATIAFAGLCAYGVRRLRIQGGTIIVPLFLGAFLQGVGLLKIELPMWLLAIAYALVGWS 259 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGL F + IL R LP++ I L+A+C MA L F ID +TAYLATSPGG D+ Sbjct: 260 IGLRFTRSILEHVARALPRVSACIVLLMALCGCMAAALHIFAGIDPLTAYLATSPGGADS 319 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 VA+IAA S+ D+ +MAMQT R ILL GP +ARFI+ + Sbjct: 320 VAIIAASSDVDVPFVMAMQTGRFLIILLIGPTLARFIARRS 360 Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 1/166 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGI-IFSMRGITLQLPRSAFLAAQAILGCMI 65 + L + G + + ++ P+ G + + + ++LP A A++G I Sbjct: 201 AATIAFAGLCAYGVRRLRIQGGTIIVPLFLGAFLQGVGLLKIELPMWLLAIAYALVGWSI 260 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 T SIL +A P V A +++ + + L ++ + T +SPGGA ++ Sbjct: 261 GLRFTRSILEHVARALPRVSACIVLLMALCGCMAAALHIFAGIDPLTAYLATSPGGADSV 320 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ 171 +A D+ V MQ R L + + R + + A N Sbjct: 321 AIIAASSDVDVPFVMAMQTGRFLIILLIGPTLARFIARRSGLAENP 366 >UniRef50_Q48HD1 AbrB protein n=9 Tax=Gammaproteobacteria RepID=Q48HD1_PSE14 Length = 362 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 138/345 (40%), Positives = 212/345 (61%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P+ QW L +++ ++PAA+ LGPM+ I F + G T+++P+ AF Q + Sbjct: 14 PLTQWTGLILMAGAAGQLLKLFNMPAAMFLGPMLVAIGFGVSGATIRMPKRAFQLGQGTV 73 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G +IA ++ S+L T +W ++L ++T++ SA VG LLVR+ +P NT AWG+SPG Sbjct: 74 GVLIAHAMSVSVLLTALQSWHVMLLATILTVVLSAAVGLLLVRFGGIPSNTAAWGTSPGA 133 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+AMVAM++DYGAD R+VA MQY+RV+ V LV+ + ++ A Sbjct: 134 ASAMVAMSEDYGADSRVVATMQYVRVVCVVTIGALVSHFIGAPDSGADVHSTAAALHSLN 193 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 + L + LAV+ V RLP+G +L+P++ G LQ ++ I +P+WLL + Y AIG Sbjct: 194 LIDLALSLAVIVTGVALGSRLPAGALLVPLMLGGALQLSGVMQISIPDWLLPVGYGAIGC 253 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +GL FD+ + R LP ++L+ L+ +CA AW + M D+++ YLATSPGGLD Sbjct: 254 YVGLRFDRPTVQYVWRRLPMMILASLLLIVLCALSAWLIAAMMGKDYLSVYLATSPGGLD 313 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 T+A+IA ++AD+ ++AMQTLRLF ++LTG +AR I + KR Sbjct: 314 TMAIIAIDTHADVGFVLAMQTLRLFGVILTGSFLARQIIRLSDKR 358 >UniRef50_Q11GX1 Putative ammonia monooxygenase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11GX1_MESSB Length = 369 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 146/341 (42%), Positives = 210/341 (61%), Gaps = 1/341 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P QW +L +LS+ L+ + PAA LLGPM + + + G ++++P F+A+Q ++ Sbjct: 25 PARQWLLLILLSVGLACVLKLLQFPAAALLGPMFSAAVLGINGASIRVPSLPFVASQGVI 84 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G +IA + ++L LA WP+VL +++ T+L+S+ +GW++ R+ LPG+T WGS+PG Sbjct: 85 GILIAMAIEPAVLVGLADKWPLVLVVVVSTVLASSFLGWMISRWGILPGSTAVWGSAPGA 144 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A AMV MA +GAD RLVAFMQYLRV+ VA AA ++ ++ A I + Sbjct: 145 ATAMVLMAAAFGADQRLVAFMQYLRVMMVALAAAVIASIVATGPEAASEGTIWFPQLDWP 204 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 +T+ +A + +G LL LPS L M+ G L G +LP WLL AY IGW Sbjct: 205 AFPVTVFVAAIGAVLGWLLGLPSPFFLGSMILGVALHLGTGFQFQLPPWLLVAAYTFIGW 264 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 IGL F + I ALR LPQI+ SI AL+ C G+A L + + ID ++AYLATSPGG+D Sbjct: 265 TIGLNFTRTIARHALRALPQIIGSILALMVFCGGLALLLNQILGIDLLSAYLATSPGGMD 324 Query: 302 TVAVIAAGSN-ADMALIMAMQTLRLFSILLTGPAIARFIST 341 ++A+IAA SN +M+ IM MQ R +LL GPAIAR ++ Sbjct: 325 SIAIIAAASNDVNMSFIMTMQMARFLFVLLFGPAIARLVAG 365 >UniRef50_A8TWK7 Putative ammonia monooxygenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWK7_9PROT Length = 367 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 69/339 (20%), Positives = 137/339 (40%), Gaps = 1/339 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 + L + F LP ++G M+A I S+ G +++ AILG M+ Sbjct: 28 ALALALGTAGGLLFAWAKLPLPWMMGAMVATTIASVAGANIRVDYRLRTVMIAILGIMLG 87 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 S++ + + +L+ +++ ++ W + + T + SSPGG MV Sbjct: 88 SAFQPSLIDRIGEWTITIAGLLVYAIVAGSLCTWYFRKAAGYDAVTSYFASSPGGLNEMV 147 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG-DNAEAVNQHIVWFPPVSINLLL 185 + ++ G D R++A R+L V + ++ A + ++ + Sbjct: 148 IVGREMGGDDRIIALTHSARILLVVMTLPFLFQLFTDYTPAAGLLPRGGSIDMPLLDWAI 207 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 VV V LR+P+ ++ PML A + + P L+A+A + +G IG Sbjct: 208 LAGCGVVGAIVAKRLRIPAAVLIGPMLLSAGIHVAGVTQATPPSLLVAIAQVVMGTGIGC 267 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 F + ++ + + S LL + + L + + + LA +PGGL +++ Sbjct: 268 RFAGTAVRDIVKVVGVSIGSTVILLVLGVLFGFALQQITDVPWFVLVLAYAPGGLAEMSL 327 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 +A D+A + R+ I++ P R + Sbjct: 328 VALALGRDVAFVATHHIFRIGFIVILAPLAFRIMRRTGR 366 Score = 79.6 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 1/162 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLA-AQA 59 MP+L W +L ++ +I + +PAA+L+GPM+ + G+T P S +A AQ Sbjct: 200 MPLLDWAILAGCGVVGAIVAKRLRIPAAVLIGPMLLSAGIHVAGVTQATPPSLLVAIAQV 259 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G I G+ + + + + ++ L+ + G+ L + + +P +P Sbjct: 260 VMGTGIGCRFAGTAVRDIVKVVGVSIGSTVILLVLGVLFGFALQQITDVPWFVLVLAYAP 319 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 GG A M +A G D+ VA R+ F+ A L R+M Sbjct: 320 GGLAEMSLVALALGRDVAFVATHHIFRIGFIVILAPLAFRIM 361 Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 1/163 (0%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 ++ L + L G + +LP M+ M+A + I + L + +G Sbjct: 26 SMALALALGTAGGLLFAWAKLPLPWMMGAMVATTIASVAG-ANIRVDYRLRTVMIAILGI 84 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G F ++ R I + + + W + D +T+Y A+SPGGL+ Sbjct: 85 MLGSAFQPSLIDRIGEWTITIAGLLVYAIVAGSLCTWYFRKAAGYDAVTSYFASSPGGLN 144 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 + ++ D +I + R+ +++T P + + + Y P Sbjct: 145 EMVIVGREMGGDDRIIALTHSARILLVVMTLPFLFQLFTDYTP 187 >UniRef50_B7KIK2 Membrane protein AbrB duplication n=3 Tax=Cyanobacteria RepID=B7KIK2_CYAP7 Length = 389 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 93/346 (26%), Positives = 162/346 (46%), Gaps = 7/346 (2%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCMIAQN 68 L+++ F + +P LLGPM+AGI +++ +G L + L Q I+G + A Sbjct: 41 IALAIVAGFVFSGLQVPVGWLLGPMLAGIGYAVIKGSRQPLSPTFKLVGQIIVGLVTASR 100 Query: 69 LTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAM 128 + L + ++ ++ T S G+LL R++ + TG G PG A+++VAM Sbjct: 101 FSPETLLIAKSYFIPLILCVVTTGCLSMFNGYLLSRWAGIDRATGFLGFIPGAASSIVAM 160 Query: 129 AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ------HIVWFPPVSIN 182 +++ GAD VA +QY+RVL V ++ N + H + P+ IN Sbjct: 161 SEEMGADAIAVALIQYIRVLLVVLILPATATILFPVNIDPQTPVTVGITHNLPTLPIVIN 220 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LL+ + +G LLR PS L P + G ++ IE+P +L ++ + +G Sbjct: 221 LLIIAGCGGLGIWLGKLLRFPSAGFLGPFVVGLIVFWLLPYQIEIPRFLFSVGLLLLGIS 280 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG+ FD + L+ + + + L IC G+ + +D +TA L +PGG++ Sbjct: 281 IGVQFDWTVARTLLKAVLIEVGLVIVLSLICLGIGYEFHVVTGVDTVTAILGFTPGGIEA 340 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + D L++AMQ R+ I+L P + F++ A Sbjct: 341 MIATVMQLGGDTGLVLAMQLTRMLGIILIAPWLVSFLAKRAKNSDK 386 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 78/193 (40%) Query: 147 VLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGT 206 ++F R+ D+ + + I L I LA+VAG V L++P G Sbjct: 1 MVFKISLLPDSYRVAYPDSYSQIKEKIASRWSTLKTPLEKIALAIVAGFVFSGLQVPVGW 60 Query: 207 MLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSI 266 +L PMLAG + L + + +G F + LL A ++L + Sbjct: 61 LLGPMLAGIGYAVIKGSRQPLSPTFKLVGQIIVGLVTASRFSPETLLIAKSYFIPLILCV 120 Query: 267 FALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLF 326 + + L+R+ ID T +L PG ++ ++ AD + +Q +R+ Sbjct: 121 VTTGCLSMFNGYLLSRWAGIDRATGFLGFIPGAASSIVAMSEEMGADAIAVALIQYIRVL 180 Query: 327 SILLTGPAIARFI 339 ++L PA A + Sbjct: 181 LVVLILPATATIL 193 >UniRef50_A8ER15 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ER15_ARCB4 Length = 361 Score = 204 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 6/343 (1%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAIL 61 +++ + ++++ SI F+ +H P LLG + A I + + P+ A+ ++ Sbjct: 17 LIKMLLALLIAVSGSILFIFLHFPLPWLLGAIFATTIAIRFPTVPISSPKPFSAPARILI 76 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G I T IL + +L ++ TLL + + T GS PGG Sbjct: 77 GLTIGSAFTPHILQYIPHYIISLLLVIPFTLLVIFFGTYYYHKILKYDLKTSYLGSMPGG 136 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 MV + QD AD + MQ R+ FV + + + + + I+ P I Sbjct: 137 VIEMVIIGQDLKADTSKITLMQSSRLFFVIVSLPFIIQYIF--QIDIRGNQILTTPIKDI 194 Query: 182 NLL---LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 NL +L + + LRL + ++ PM+ +L S + +P+ LL + Sbjct: 195 NLFEFSYIYILGIAGAIIAKRLRLAAAYLIGPMIVSIILYSTGFVHTHIPDELLKFIQVI 254 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 G IG F L + L L+ +CA + + + + + LA PG Sbjct: 255 FGTIIGFTFKNVSLKTISKTFLATLGHFAILIILCAIFIFIIYKSLDFKALDILLAFGPG 314 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 G + ++A A++ I +RLF ++ P IA+ + Sbjct: 315 GQTEINLVAILIGANLPYITLHHIVRLFIVMNIAPIIAKRLDR 357 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 75/162 (46%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 P+ I +LL +L+AV + L P +L + A + + I P+ A A + Sbjct: 15 PILIKMLLALLIAVSGSILFIFLHFPLPWLLGAIFATTIAIRFPTVPISSPKPFSAPARI 74 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 IG IG F IL + +LL I L + + + + D T+YL + P Sbjct: 75 LIGLTIGSAFTPHILQYIPHYIISLLLVIPFTLLVIFFGTYYYHKILKYDLKTSYLGSMP 134 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 GG+ + +I AD + I MQ+ RLF ++++ P I ++I Sbjct: 135 GGVIEMVIIGQDLKADTSKITLMQSSRLFFVIVSLPFIIQYI 176 >UniRef50_Q223M5 Putative ammonia monooxygenase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q223M5_RHOFD Length = 355 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 149/344 (43%), Positives = 211/344 (61%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 M L W +L ++S +L A+HLPA +LLG M+AGI+ S + I L +P + F AQ + Sbjct: 9 MTALWWSVLLLISAVLGWALTALHLPAGVLLGCMLAGIVLSSQEIRLGIPTTLFALAQGV 68 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +GC++A++L S L +A +WPI L + +SA +GWLL+ PG T WG +PG Sbjct: 69 VGCLMAKSLQPSTLAKVASDWPIFLGATFSIVAASAALGWLLMHRQVFPGTTAVWGLAPG 128 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 A+AMV MA+ YGAD+RLVAFMQYLRV V A LV A + + Sbjct: 129 AASAMVLMAEAYGADVRLVAFMQYLRVAVVTAVAALVAHFWTTRAAPMTPEVHWFAVINP 188 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 +L T+LLA ++ L +P G M++P++ GA LQ+ + IELP LLA++Y IG Sbjct: 189 GDLGWTLLLAFAVSSIAGWLHIPGGPMVVPLVLGAALQAMGWLVIELPPALLAVSYAVIG 248 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 W IGL F + IL ALR LP +L SIFAL+ + +A GLT++ D +TAYLA+SPGG Sbjct: 249 WSIGLRFTRAILRHALRALPAVLGSIFALMGVGLVIAVGLTQWAGHDPLTAYLASSPGGA 308 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 D+VA+IAA S D +MAMQ R +L+ GP +++F++T + Sbjct: 309 DSVAIIAATSAVDAGFVMAMQLARFLMVLVLGPRVSKFVATQSR 352 >UniRef50_C0VNM7 Ammonia monooxygenase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VNM7_9GAMM Length = 354 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 73/343 (21%), Positives = 144/343 (41%), Gaps = 1/343 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 L++ + L+ L ++ +HLP LLGP+ + + ++ SA +I+G Sbjct: 5 LKYALSLSLAFLGALVAQWLHLPIPWLLGPLFTTALLKINHAPIECHNSARSIGLSIIGL 64 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + T ++ +A +W ++L LL LL AI ++L R++ + T + S+ GGA Sbjct: 65 TLGLYFTPEMIHLIASHWLVLLIGLLFALLLGAIGAFILQRWAKVDFKTAWFASAIGGAN 124 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 M +A+ Y A + VA LRVL V + +G + +Q Sbjct: 125 EMSHLAEHYQARVDQVASAHTLRVLMVVVIVPFFYQ-FMGWHGFDTDQIAKHLEVNWFGF 183 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 +L++ +A + +LP+ +L + + +P ++ + + +GW + Sbjct: 184 FSLVLISYIASRIFIQFKLPNPWTFGALLVAIFFTAQDIHLSAIPTPIIHLGQVLLGWSL 243 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G F A R L + L L + +A+ L ++ + T L +PGG+ + Sbjct: 244 GNKFKPGFFKTAPRYLSIVALCNLGALFLTGLLAYTLMQWTDLPIATLGLGLAPGGVAEM 303 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + A + ++ A +R+ +L T + F K+ Sbjct: 304 TITAKVLQLGVPIVTAFHVVRMVGVLGTVGYLYLFFDKILQKK 346 Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 1/160 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAIL 61 + L ++S + S F+ LP G ++ I F+ + I L +P Q +L Sbjct: 180 WFGFFSLVLISYIASRIFIQFKLPNPWTFGALLVAIFFTAQDIHLSAIPTPIIHLGQVLL 239 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + T IV L L + ++ + L++++ LP T G +PGG Sbjct: 240 GWSLGNKFKPGFFKTAPRYLSIVALCNLGALFLTGLLAYTLMQWTDLPIATLGLGLAPGG 299 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 A M A+ + +V +R++ V G + Sbjct: 300 VAEMTITAKVLQLGVPIVTAFHVVRMVGVLGTVGYLYLFF 339 >UniRef50_B4AWS0 Membrane protein AbrB duplication n=3 Tax=Cyanobacteria RepID=B4AWS0_9CHRO Length = 400 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 91/346 (26%), Positives = 158/346 (45%), Gaps = 7/346 (2%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCMIAQN 68 V++LL + +P LLGPM+AGI ++++ G LP L AQ I+G + A Sbjct: 41 LVIALLAGWVCSWLKIPVGWLLGPMLAGIAYAIKQGSRQPLPPYFKLIAQIIIGMVTASR 100 Query: 69 LTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAM 128 + + + +L + T S G+LL R++ + TG G PG A+++VAM Sbjct: 101 FSLETVMIAKTYFIPLLLCVCATGGLSMFNGYLLSRWAGIDQATGFLGFIPGAASSIVAM 160 Query: 129 AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA------VNQHIVWFPPVSIN 182 +++ GAD VA +QY+RVL V + EA + P+ +N Sbjct: 161 SEEMGADAIAVALIQYIRVLLVVLLLPATATFLFPVQLEAQTAANVAATTDLSTLPLYLN 220 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LL+ + + +G L+ PS L P G ++ +IE+P + + +G Sbjct: 221 LLIVAICGGLGIWLGKRLKFPSAGFLGPFFVGLIVFWLLPYSIEIPRSVFNGGLLLLGIS 280 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG+ FD ++ + L+ + + + L IC G+ + ++ TA L +PGG++ Sbjct: 281 IGVQFDWEVARKLLKAVYIEIALVCVLSLICLGIGYEFHVLTGVETSTAILGFTPGGIEA 340 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + D L++AMQ R+ I+L P + F++ A Sbjct: 341 MIATVMQLGGDTGLVLAMQLTRMLGIILIAPWLVGFLAKRVKSSHA 386 Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 85/193 (44%) Query: 147 VLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGT 206 ++F + + + + I P + ++ +++A++AG V L++P G Sbjct: 1 MIFKISLLPDAYVVAYPHSYLQLKEKITVSWPKTQKIIGQLVIALLAGWVCSWLKIPVGW 60 Query: 207 MLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSI 266 +L PMLAG Q LP + +A + IG F + ++ A +LL + Sbjct: 61 LLGPMLAGIAYAIKQGSRQPLPPYFKLIAQIIIGMVTASRFSLETVMIAKTYFIPLLLCV 120 Query: 267 FALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLF 326 A + + L+R+ ID T +L PG ++ ++ AD + +Q +R+ Sbjct: 121 CATGGLSMFNGYLLSRWAGIDQATGFLGFIPGAASSIVAMSEEMGADAIAVALIQYIRVL 180 Query: 327 SILLTGPAIARFI 339 ++L PA A F+ Sbjct: 181 LVVLLLPATATFL 193 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 1/175 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAG-IIFSMRGITLQLPRSAFLAAQAILGCMI 65 ++ + L + P+A LGP G I+F + ++++PRS F +LG I Sbjct: 222 LIVAICGGLGIWLGKRLKFPSAGFLGPFFVGLIVFWLLPYSIEIPRSVFNGGLLLLGISI 281 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 + L I +A++ V L +G+ + + +T G +PGG AM Sbjct: 282 GVQFDWEVARKLLKAVYIEIALVCVLSLICLGIGYEFHVLTGVETSTAILGFTPGGIEAM 341 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 +A G D LV MQ R+L + A + + + V S Sbjct: 342 IATVMQLGGDTGLVLAMQLTRMLGIILIAPWLVGFLAKRVKSSHAPEAVPDSSPS 396 >UniRef50_A6VSZ2 Putative ammonia monooxygenase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSZ2_MARMS Length = 359 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 149/335 (44%), Positives = 213/335 (63%), Gaps = 3/335 (0%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQ 67 +L +S +L + F +LPAALLLGPMI II + G ++LP+ FL AQ +LG MIA Sbjct: 23 VLLAVSFVLVVCFEYANLPAALLLGPMITAIILATSGAGMKLPKPMFLMAQGVLGMMIAN 82 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 +L ++ +++ WP+ L + T+++S+ +GWLL R LPG T WGSSPG A+AM Sbjct: 83 SLPLTVFAKISMEWPLFLIGTVSTIVASSFLGWLLSRSGLLPGTTAIWGSSPGAASAMTI 142 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI-NLLLT 186 M++ YGAD+RLVAFMQYLRV A AA +V + D A + I W S +T Sbjct: 143 MSESYGADMRLVAFMQYLRVACCAIAATIVAAIFHVDGVAA--EPIDWLGVSSWSGFGIT 200 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 + + +VA VG LRLPSG +L+ + G V++ ++ I LP W LA+++ +GW IG Sbjct: 201 LSVILVASIVGVKLRLPSGPLLLSLAVGLVIKFSGILPIVLPHWCLAISFAMLGWGIGFR 260 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 F +Q+L A P +L +I AL+AI A +A L F ID +TA+LATSPGG D+VA+I Sbjct: 261 FTRQVLQHAWHVFPHVLAAILALIAINACLAMLLITFADIDPLTAFLATSPGGADSVAII 320 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 AA +NAD++ +MAMQ R +L+ GP +AR++ST Sbjct: 321 AASTNADVSFVMAMQVARFLLVLIAGPMLARWLST 355 Score = 63.8 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 1/154 (0%) Query: 172 HIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 P + L + + ++ V LP+ +L PM+ +L + ++LP+ + Sbjct: 10 KTPSRWPTTWRLTVLLAVSFVLVVCFEYANLPAALLLGPMITAIILATSG-AGMKLPKPM 68 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 MA +G I + + P L+ + + + + W L+R + TA Sbjct: 69 FLMAQGVLGMMIANSLPLTVFAKISMEWPLFLIGTVSTIVASSFLGWLLSRSGLLPGTTA 128 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRL 325 +SPG + +++ ADM L+ MQ LR+ Sbjct: 129 IWGSSPGAASAMTIMSESYGADMRLVAFMQYLRV 162 >UniRef50_B6ALI3 Putative ammonia monooxygenase n=2 Tax=Leptospirillum sp. Group II RepID=B6ALI3_9BACT Length = 345 Score = 200 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 134/333 (40%), Positives = 204/333 (61%), Gaps = 3/333 (0%) Query: 15 LLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSIL 74 +L+ FLAVHLP AL+LGPMIA I+F + TL++ R F +Q ++GCM+AQ L S+L Sbjct: 1 MLAFLFLAVHLPGALMLGPMIAAIVFGVSRSTLRVHRVPFSFSQGVVGCMVAQALKPSVL 60 Query: 75 TTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGA 134 + ++++ ++ + +GWLL R PG T WG PG A++MV MA+ YGA Sbjct: 61 HAFWQRGLLFASLVVAIIVFNCALGWLLSRAKIFPGTTAVWGLLPGAASSMVIMAEAYGA 120 Query: 135 DIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI-NLLLTILLAVVA 193 D+RLVAF+QYLRV+ V A V L + +WFP S L T+ + + Sbjct: 121 DVRLVAFIQYLRVVMVGFLASGVAHFSLHHAL--TGKVFLWFPRFSPLALGETMAIVLAG 178 Query: 194 GTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILL 253 +G R+P G +LIP++AG+VL++ +I+I LP WLLA AY+ IGW +GL F + +L Sbjct: 179 MGIGSFFRIPGGMLLIPLIAGSVLEAAGMISIVLPGWLLAGAYLCIGWMVGLRFQRDVLS 238 Query: 254 RALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 R +P+ + + ++A C + + L RF+ +D +TAYLATSPGG+D VA+IAA +N Sbjct: 239 SVARMIPRTIFVLLVVIAFCGFLGFLLNRFLGVDPLTAYLATSPGGVDAVAIIAASANVK 298 Query: 314 MALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + +MAMQ R+ ++L GP +++++ P Sbjct: 299 IGFVMAMQLSRMMMVVLIGPVFSKWVANRVPSP 331 Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 1/173 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAIL 61 L G + L +P +LL P+IAG + G+ ++ LP A + Sbjct: 165 PLALGETMAIVLAGMGIGSFFRIPGGMLLIPLIAGSVLEAAGMISIVLPGWLLAGAYLCI 224 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G M+ +L+++A P + +LLV + +G+LL R+ + T +SPGG Sbjct: 225 GWMVGLRFQRDVLSSVARMIPRTIFVLLVVIAFCGFLGFLLNRFLGVDPLTAYLATSPGG 284 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIV 174 A+ +A I V MQ R++ V + ++ + Q V Sbjct: 285 VDAVAIIAASANVKIGFVMAMQLSRMMMVVLIGPVFSKWVANRVPSPGVQRPV 337 >UniRef50_Q2RP17 Putative ammonia monooxygenase n=4 Tax=Alphaproteobacteria RepID=Q2RP17_RHORT Length = 362 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 163/346 (47%), Positives = 224/346 (64%), Gaps = 3/346 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 LQW L S + G LPAALLLGPMIA I ++ G + LPR+ +L AQA++G Sbjct: 17 PLQWLALGATSAAVGWGLHTTGLPAALLLGPMIAAICCALAGTRIHLPRAPYLGAQAMIG 76 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 CMI +++ ++ + +W + LAI+L T+ +S+++GW++ R+ SLPG T WGSSPG A Sbjct: 77 CMIGGSISPGLIASFLDDWALFLAIVLATVAASSLLGWMMSRWGSLPGTTSVWGSSPGAA 136 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 +AMV MA+ +GAD+RLVAFMQYLRV+ VA AA L+ + + + Sbjct: 137 SAMVVMAEAFGADVRLVAFMQYLRVVCVASAAALIAHLWVEGAPPPPTPWFPALDGLVFG 196 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 T+ LA + T+G LR+PSG M++PM+A AVL S L+ I LP WLLA+AY A+GW Sbjct: 197 --QTLALAGIGATLGVFLRVPSGAMVVPMVAAAVLSSFGLLAIHLPPWLLALAYAALGWT 254 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGLGF + +L A R LPQIL SI AL+A C G AW LT + +D +TAYLATSPGGLD+ Sbjct: 255 IGLGFTRAVLAHAARALPQILASIAALMAFCGGTAWLLTSLLGVDPVTAYLATSPGGLDS 314 Query: 303 VAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 VA+IAA S D++ +MA+QT R ++ GP +ARFI+ + Sbjct: 315 VAIIAASSARVDLSFVMALQTARFIIVICLGPPLARFIAGRIGDKP 360 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 1/175 (0%) Query: 165 NAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT 224 + P+ + L + G LP+ +L PM+A Sbjct: 2 PLPVSPSSRLGSLPIPLQWLALGATSAAVGWGLHTTGLPAALLLGPMIAAICCALAG-TR 60 Query: 225 IELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFM 284 I LP A IG IG ++ L L + A +A + + W ++R+ Sbjct: 61 IHLPRAPYLGAQAMIGCMIGGSISPGLIASFLDDWALFLAIVLATVAASSLLGWMMSRWG 120 Query: 285 HIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + T+ +SPG + V+A AD+ L+ MQ LR+ + IA Sbjct: 121 SLPGTTSVWGSSPGAASAMVVMAEAFGADVRLVAFMQYLRVVCVASAAALIAHLW 175 >UniRef50_B8ELT3 Membrane protein AbrB duplication n=6 Tax=Rhizobiales RepID=B8ELT3_METSB Length = 366 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 155/339 (45%), Positives = 220/339 (64%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 QW +L LS L +G A+HLPAALLLGPM+A I+ ++ ++ P+SAF++AQA++GCM Sbjct: 21 QWAILIGLSAALVVGLEALHLPAALLLGPMLAAILLTVAEGGVRAPQSAFVSAQAVVGCM 80 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 IA +L SI + NWP+ L ++ ++++ +GWLL R+ LPG WGS+PG A+A Sbjct: 81 IAGSLPLSIGGEMLRNWPLFLGGVVSVVVAANGLGWLLARWRVLPGAAAIWGSAPGAASA 140 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 M+ MA+ YGAD+RLVAFMQYLRV+ VA A LV+R+ + + + + + Sbjct: 141 MILMAEAYGADMRLVAFMQYLRVVCVAIVASLVSRLWVAGPLDHHPAIVWFPAVPWTSFA 200 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 T+ +A + G L +P+G +L+P+ G LQSG +TI LP WLLA Y +GW +G Sbjct: 201 ETLAVAALGALAGKRLHIPAGPLLLPLAIGVTLQSGGWMTIFLPPWLLAACYCVVGWSVG 260 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 L F I+ A R LP++L+SI AL+AIC G A L ID +TAYLATSPGG D++A Sbjct: 261 LRFTPAIIAYAARALPRVLVSILALIAICGGFAAILATVGGIDPLTAYLATSPGGGDSIA 320 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 +IAA S D+ +MAMQ R+ +LL GPAIARF++ + Sbjct: 321 IIAASSKVDVPFVMAMQMARILVVLLFGPAIARFVAKRS 359 Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 1/170 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQA 59 +P + ++ L ++ +H+PA LL P+ G+ G +T+ LP A Sbjct: 194 VPWTSFAETLAVAALGALAGKRLHIPAGPLLLPLAIGVTLQSGGWMTIFLPPWLLAACYC 253 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G + T +I+ A P VL +L + +L + T +SP Sbjct: 254 VVGWSVGLRFTPAIIAYAARALPRVLVSILALIAICGGFAAILATVGGIDPLTAYLATSP 313 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAV 169 GG ++ +A D+ V MQ R+L V + R + + Sbjct: 314 GGGDSIAIIAASSKVDVPFVMAMQMARILVVLLFGPAIARFVAKRSGAGA 363 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 1/178 (0%) Query: 162 LGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQ 221 + +++ + + + + I L+ L LP+ +L PMLA +L + Sbjct: 1 MANSSPSPRRVSLASRSAGAQWAILIGLSAALVVGLEALHLPAALLLGPMLAAILLTVAE 60 Query: 222 LITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLT 281 + P+ A +G I I LR P L + +++ G+ W L Sbjct: 61 G-GVRAPQSAFVSAQAVVGCMIAGSLPLSIGGEMLRNWPLFLGGVVSVVVAANGLGWLLA 119 Query: 282 RFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 R+ + A ++PG + ++A ADM L+ MQ LR+ + + ++R Sbjct: 120 RWRVLPGAAAIWGSAPGAASAMILMAEAYGADMRLVAFMQYLRVVCVAIVASLVSRLW 177 >UniRef50_C6CTI7 Membrane protein AbrB duplication n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTI7_PAESJ Length = 370 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 81/353 (22%), Positives = 156/353 (44%), Gaps = 9/353 (2%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILG 62 ++ + ++ I F ++ P LLGPMIA +I + + + P + I+G Sbjct: 12 FKFLITLATAVGGGIIFHLLNTPIPWLLGPMIAVLIGTNVWKGKYRWPGQIRNSGMIIVG 71 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I ++TG+ L + P + + ++ LL + +++ + S T GS PGG Sbjct: 72 YTIGLSMTGTALKEMGEQLPTMCLMTVILLLLCGGIAFVVSKLSDTDFKTALLGSVPGGL 131 Query: 123 AAMVAMAQD-YGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAE-------AVNQHIV 174 + ++A+A++ G ++ +V Q +R++ + L+ + + Sbjct: 132 SQVLALAEETKGVNLTVVTVTQVVRLMIIVIGIPLLVFSPIFGQVHDAAAAAMPIVAKHD 191 Query: 175 WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 + + N+L+ + V+ G ++ P+ +L P +A AVLQ L LP L + Sbjct: 192 NWAALFPNILIFAPVCVICAIAGNRIKFPTAFLLGPAIATAVLQGIGLHGPSLPSTLTSA 251 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 A + IG +GL L R +R + S L+ G++ +T + TA L+ Sbjct: 252 AQLMIGTYVGLLLKPGKLRRKVRTFSFAIGSGLVLMLCAWGLSELMTLLHPVSRSTALLS 311 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 +PGG+D + ++A NAD++++ Q R F I P + R + K Sbjct: 312 LAPGGMDQMGILAHEINADLSMVSGYQLFRTFFIFFAVPPLLRLLFRIKLKSP 364 >UniRef50_Q1UZU3 Possible AbrB protein n=4 Tax=root RepID=Q1UZU3_PELUB Length = 367 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 157/340 (46%), Gaps = 1/340 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 ++ ++ ++S+ +I ++P A +LGPM+A + ++ G+ +++P+ A + +LG Sbjct: 29 KFLLVILISIPSAIVADYFNIPLAWMLGPMLAVSVAALSGLKIKMPKLALSSILIVLGLH 88 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 I + +++ + + + + L+S IV L ++S T + ++PG Sbjct: 89 IGNYIDQNLINQMTEWVWTSIIMFVYILISILIVSKYLQKFSGYNVKTSIFSAAPGALGP 148 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 ++ +A+ +D+ VA +R++ + + A + + + +LL Sbjct: 149 LMILAEHEKSDLSQVATSHLIRLIIIITVIPFFVVNYSTNEALTI-EKFNYLDQNHFHLL 207 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 + ++ +++ + + +P+ + ++A +LQ ++ + +LP+ + + +G +G Sbjct: 208 ILLIGSILLIFLFDKIGVPAALLSGTLVASGILQITEVASYKLPDESINFCLLILGASVG 267 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 F + L L++ L+A+ A T F+ +F+T L+ SPGG+ VA Sbjct: 268 CRFADKSLKEVAGNSFHSLVATVILVALGLLAAIVATYFVDTNFLTLLLSFSPGGIYEVA 327 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 VIA + D + +RL IL T P I + I Sbjct: 328 VIAIAFDLDPNFVAFHHIIRLLMILFTVPVILKIIGKKLN 367 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 1/158 (0%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 S LL IL+++ + V +P ML PMLA +V L I++P+ L+ + Sbjct: 26 FSKKFLLVILISIPSAIVADYFNIPLAWMLGPMLAVSVAALSGL-KIKMPKLALSSILIV 84 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 +G IG D+ ++ + + ++ +L ++ L +F + T+ + +PG Sbjct: 85 LGLHIGNYIDQNLINQMTEWVWTSIIMFVYILISILIVSKYLQKFSGYNVKTSIFSAAPG 144 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 L + ++A +D++ + +RL I+ P Sbjct: 145 ALGPLMILAEHEKSDLSQVATSHLIRLIIIITVIPFFV 182 >UniRef50_C8WDL2 Membrane protein AbrB duplication n=6 Tax=Zymomonas mobilis RepID=C8WDL2_ZYMMN Length = 369 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 151/340 (44%), Positives = 217/340 (63%), Gaps = 3/340 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 ++QW L + S+L F +HL AALLLG M A I+ ++ T+ +PR F+ +Q ++G Sbjct: 19 LIQWASLLLGSVLFISLFEVLHLGAALLLGAMAAAILVAVMEGTVAVPRWPFMLSQGVIG 78 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 CMIA ++ IL + WP+ LA ++ +L S+++GWLLV ++ +PG T WGSSPG A Sbjct: 79 CMIAHSMPLPILDAMLRQWPLFLAGVVSVILVSSLLGWLLVCFNVVPGTTALWGSSPGAA 138 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 M MA+ YGAD+RLVAFMQYLRV+ VA A L+ ++ +G V +I+WFPP+ + Sbjct: 139 LTMTLMAESYGADVRLVAFMQYLRVVCVALIASLIAQIFMGH--HPVVSNIIWFPPIHLA 196 Query: 183 LLL-TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 L T+ V R+P+G +L+P+ G VLQ TIELP WLLA++Y +GW Sbjct: 197 AFLKTLAFIAVTTFFAARFRIPAGGILLPLGLGVVLQDAGWFTIELPTWLLAISYSLVGW 256 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 IGL F + I+ A R ++L SI L+ +C+G+A L + H+DF+TAYLA+SPGG+D Sbjct: 257 SIGLRFSRSIVRYAARSFFRVLASILTLILLCSGLALVLAKIAHVDFLTAYLASSPGGVD 316 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 +VAV+AA S DM +M MQT+R +LLT P IA +S Sbjct: 317 SVAVVAASSPVDMPFVMGMQTVRFVVVLLTAPTIAGRLSR 356 Score = 61.1 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 55/121 (45%) Query: 224 TIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRF 283 T+ +P W ++ IG I IL LR P L + +++ + + + W L F Sbjct: 62 TVAVPRWPFMLSQGVIGCMIAHSMPLPILDAMLRQWPLFLAGVVSVILVSSLLGWLLVCF 121 Query: 284 MHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 + TA +SPG T+ ++A AD+ L+ MQ LR+ + L IA+ + Sbjct: 122 NVVPGTTALWGSSPGAALTMTLMAESYGADVRLVAFMQYLRVVCVALIASLIAQIFMGHH 181 Query: 344 P 344 P Sbjct: 182 P 182 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 59/130 (45%) Query: 45 ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVR 104 T++LP + +++G I + SI+ A ++ VLA +L +L + + +L + Sbjct: 238 FTIELPTWLLAISYSLVGWSIGLRFSRSIVRYAARSFFRVLASILTLILLCSGLALVLAK 297 Query: 105 YSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGD 164 + + T SSPGG ++ +A D+ V MQ +R + V A + + + Sbjct: 298 IAHVDFLTAYLASSPGGVDSVAVVAASSPVDMPFVMGMQTVRFVVVLLTAPTIAGRLSRN 357 Query: 165 NAEAVNQHIV 174 AE + I Sbjct: 358 KAEQQKETIP 367 >UniRef50_Q8ET66 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ET66_OCEIH Length = 349 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 77/340 (22%), Positives = 149/340 (43%), Gaps = 7/340 (2%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCMIA 66 + ++ L+ + F + LP LLGP+ +I + I+L I G +I Sbjct: 3 ITFIVGLIGAFIFSVIGLPMPWLLGPLFFVLITQLKAPISLTWHPFFRNIGLVIAGYVIG 62 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 T L + +P+++AI ++ L ++ ++L R S + T PGG ++ Sbjct: 63 YAFTLEALQQMIHFFPLMIAINVLFFLLFLVISFVLSRLSKMNLGTAMTCCVPGGLQQVI 122 Query: 127 AMAQDYGA-DIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLL 185 A++ D+ LV F LRVL + + + + +Q S LL Sbjct: 123 VFAEEQKEMDVTLVTFYHVLRVLVIVSMVPFIVSIQGPNLPVETSQS----EKYSFILLG 178 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 +++A G + L+++P+ +L P+ V +P+ L +A + IG IGL Sbjct: 179 LMIVAYFVGMLFKLIKVPTAYLLGPVFFVMVCNLVGWQVPMMPDSALHIAQLFIGIYIGL 238 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 + + + + LLS ++ G++W + + + DF T++L+ PGGLD + + Sbjct: 239 LLKRDSIKKMNKQWMYALLSCVIFVSFALGISWFVKQ-AYFDFSTSFLSVVPGGLDQMGI 297 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 IAA AD+ ++ A Q R+ + +++ + Sbjct: 298 IAASVQADVMIVTAFQLFRILFLSALVIPFVQYVVRNKRR 337 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 5/167 (2%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 ++I ++ ++ A + +G LP +L P+ + Q I++ + + + Sbjct: 1 MTITFIVGLIGAFIFSVIG----LPMPWLLGPLFFVLITQLKAPISLTWHPFFRNIGLVI 56 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 G+ IG F + L + + P ++ + +++ L+R ++ TA PG Sbjct: 57 AGYVIGYAFTLEALQQMIHFFPLMIAINVLFFLLFLVISFVLSRLSKMNLGTAMTCCVPG 116 Query: 299 GLDTVAVIAAG-SNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 GL V V A D+ L+ LR+ I+ P I P Sbjct: 117 GLQQVIVFAEEQKEMDVTLVTFYHVLRVLVIVSMVPFIVSIQGPNLP 163 >UniRef50_B0UQK6 Membrane protein AbrB duplication n=9 Tax=Proteobacteria RepID=B0UQK6_METS4 Length = 361 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 163/343 (47%), Positives = 234/343 (68%), Gaps = 1/343 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 QW L S LS A PAALLLGPM+A I F + G +++P++AFLAAQA++GC+ Sbjct: 18 QWVGLVAASAALSALLSAAGFPAALLLGPMLAAIGFGVSGAAIRVPKAAFLAAQALIGCL 77 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 +A + SI+ TL + ++LA++ VT+L+SA VGW+L R LPG T AWGSSPG AAA Sbjct: 78 VAHAVNASIVQTLMADGLLMLAVVGVTVLASAAVGWVLTRIRLLPGTTAAWGSSPGAAAA 137 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 MVAMA++YGAD RLVAFMQY+RV VA +A +V R ++G A A V P + +L Sbjct: 138 MVAMAEEYGADPRLVAFMQYVRVACVALSASIVARFLVGHAAPAALPEPVG-APEPLAVL 196 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 +T+ +A + +G L +PSG M+ P++ GA L +G L ++ LP+WLLA+AY A+GW +G Sbjct: 197 VTLAVAALGSWLGRRLNIPSGAMIGPLVIGATLHAGGLASMSLPDWLLALAYAAVGWTVG 256 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 L F + + + LP +L + L+A+C A+GLT + ID +TA+LATSPGGLD+VA Sbjct: 257 LRFTRATVRATVSALPGVLAATLGLIALCGLWAFGLTFLLPIDLLTAFLATSPGGLDSVA 316 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 +IA GS AD++ ++A+QTLRL +++TGP +A++IS R+ Sbjct: 317 IIAVGSKADVSFVLAVQTLRLLVVIITGPLVAKWISAKWSSRA 359 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 64/164 (39%), Gaps = 1/164 (0%) Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 + + + + + P+ +L PMLA I +P+ A I Sbjct: 16 APQWVGLVAASAALSALLSAAGFPAALLLGPMLAAIGFGVSG-AAIRVPKAAFLAAQALI 74 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G + + I+ + +L + + A + W LTR + TA +SPG Sbjct: 75 GCLVAHAVNASIVQTLMADGLLMLAVVGVTVLASAAVGWVLTRIRLLPGTTAAWGSSPGA 134 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 + +A AD L+ MQ +R+ + L+ +ARF+ +A Sbjct: 135 AAAMVAMAEEYGADPRLVAFMQYVRVACVALSASIVARFLVGHA 178 >UniRef50_Q2BDN3 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BDN3_9BACI Length = 362 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 88/349 (25%), Positives = 159/349 (45%), Gaps = 7/349 (2%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILGCMI 65 ++L I F +HLP LLG + A + S L+ PR A ++G I Sbjct: 11 LAAFFIALAGGIIFTLLHLPIPWLLGSLTAILAASRFIPFKLEWPRKLRDAGILMVGYSI 70 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 T ++ ++ P +LA+ L+T+ S ++ ++ R S + T GS PGG + M Sbjct: 71 GLTFTKDAVSQMSGKLPSMLAMTLLTIAFSVLLAVIVSRISGIDFPTVLTGSIPGGLSQM 130 Query: 126 VAMAQD-YGADIRLVAFMQYLRVLFVAGAAVLVT--RMMLGDNAEAVN--QHIVWFPPVS 180 + A++ G D+ V F+Q R+L + + ++ G+ A + I + + Sbjct: 131 LVFAEESEGIDLTTVTFLQVARLLMIVFFVPFLVLGPLLSGEAGPAAILQEEIPQWSALF 190 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 ++ I ++ +G LRLP+ +L P++A A++ LP LL ++ IG Sbjct: 191 PAVIPFIFASLAGAYLGKKLRLPTPYLLGPIVATALMGIYFTRGPALPPSLLDLSQFFIG 250 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 IGL + L + + LLS L+ + ++ L + T++L+ +PGG+ Sbjct: 251 GHIGLLMRPEKLHHKTKTISLALLSGALLIGLSLLLSILLAFEYDLSSATSFLSLAPGGM 310 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF-ISTYAPKRSA 348 D + ++A +AD+A + Q R+F I P R+ KR+A Sbjct: 311 DQMGILAHEVHADLATVTGYQLFRIFFIFFAVPPALRWYFRLRTRKRTA 359 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 1/156 (0%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 L +A+ G + LL LP +L + A +E P L + +G+ Sbjct: 9 GFLAAFFIALAGGIIFTLLHLPIPWLLGSLTAILAASRFIPFKLEWPRKLRDAGILMVGY 68 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 IGL F K + + LP +L +A +A ++R IDF T + PGGL Sbjct: 69 SIGLTFTKDAVSQMSGKLPSMLAMTLLTIAFSVLLAVIVSRISGIDFPTVLTGSIPGGLS 128 Query: 302 TVAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIA 336 + V A S D+ + +Q RL I+ P + Sbjct: 129 QMLVFAEESEGIDLTTVTFLQVARLLMIVFFVPFLV 164 >UniRef50_Q2CGP3 Possible AbrB protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGP3_9RHOB Length = 355 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 75/336 (22%), Positives = 139/336 (41%), Gaps = 1/336 (0%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNL 69 L + + F LP +LGPMIA + ++ + + P A A++G M+ Sbjct: 16 LALGAVAGLLFNWATLPLPWMLGPMIANTLAAVVRLPVASPGRARPYVVAVIGVMLGAGF 75 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 + I+ + + L + + +S A+V + T + PGG M+ + Sbjct: 76 SPDIVDQIGLWALSFLFLAVYIAVSGAVVIPYYRKVGGFDLPTAYFAGMPGGLNEMMIVG 135 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN-LLLTIL 188 ++ G D R + R++ V + R++ G + +Q F + + LL+ ++ Sbjct: 136 KEMGGDERAIVLAHASRIVVVVALVAVWFRLIQGVDLTDRSQFGTPFADIPAHELLVLLV 195 Query: 189 LAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFD 248 VV +G LLRLP+ +L PM+ A + L P+ L+ +A + +G IG F Sbjct: 196 AGVVGFYLGKLLRLPAPMLLGPMIVSAAVHLAGLTDSPPPQELVIVAQVFLGTIIGCRFI 255 Query: 249 KQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAA 308 R + + + +L + A LA SPGGL ++++A Sbjct: 256 GAAPRAIGRAIGLSIGATVLMLVVTFVFAGAFHGLFGQTLEQVLLAYSPGGLAEMSLVAL 315 Query: 309 GSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 NAD+A + + R+ I+L P + + Sbjct: 316 AMNADIAYVASHHLFRISIIVLMAPLLFGVLRRRGR 351 Score = 55.3 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 57/159 (35%), Gaps = 1/159 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 N+ + L VAG + LP ML PM+A + +L + P IG Sbjct: 10 ANMGFALALGAVAGLLFNWATLPLPWMLGPMIANTLAAVVRL-PVASPGRARPYVVAVIG 68 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 +G GF I+ + L + A + + D TAY A PGGL Sbjct: 69 VMLGAGFSPDIVDQIGLWALSFLFLAVYIAVSGAVVIPYYRKVGGFDLPTAYFAGMPGGL 128 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + + ++ D I+ R+ ++ R I Sbjct: 129 NEMMIVGKEMGGDERAIVLAHASRIVVVVALVAVWFRLI 167 >UniRef50_A1HS75 Putative ammonia monooxygenase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS75_9FIRM Length = 357 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 3/340 (0%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCMIAQ 67 + ++ F H+P LGPM+A +++ + P+ +LG ++ Sbjct: 8 VFFVACAGGALFSFSHIPLPWTLGPMVAAVLWKTWLKKPVYWPKKMRNIGMLVLGYVMGS 67 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 T + P +LA L+ ++ +L R + + G PGG + M Sbjct: 68 PFTPETGHQIIGQLPTMLAATLLIVVVCLATSYLAGRVTGIGTANSLIGGMPGGLSQMAM 127 Query: 128 MAQD-YGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT 186 + ++ G D+ +V MQ +R+L V V + D AV V I +L Sbjct: 128 ICEETKGTDVSVVTIMQTIRLLTVVFTVPFVALHGIADKTSAVKPQAVPITIQDIPMLCV 187 Query: 187 ILLAVVAGTVG-CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 +A+ +R PS ++ P+L A L + LP ++A A + +G ++GL Sbjct: 188 FFVAITCAISFIKHIRFPSPYVIGPVLGTAALTLAGIHAPVLPPPVIAAAQILVGIKMGL 247 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 + L S+ A + + G A+ + I +T +++ +PGG+ +A+ Sbjct: 248 DLEVTRLSNWRTIALSSFASVIAAIFLLLGAAYLFSLLTSIPLITVFISMAPGGMSEMAL 307 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 A +NAD++ ++A Q RL IL+ AR+ + + Sbjct: 308 TAMIANADLSTVVAYQLFRLLFILVVAVPTARWWLSRNEQ 347 >UniRef50_B9YZ45 Membrane protein AbrB duplication n=2 Tax=Betaproteobacteria RepID=B9YZ45_9NEIS Length = 347 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 2/321 (0%) Query: 26 PAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVL 85 P L+GP++A + G++LQ PR A Q +G + T ++ L P +L Sbjct: 29 PLPWLVGPLLATAGGRLAGLSLQGPRWGRAAGQWAIGSALGLYFTPEVVRLLGGLLPYLL 88 Query: 86 AILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYL 145 L + + + LL R+S L + + S PGGA+ M +A+ +G + +VA L Sbjct: 89 PAALFAFVLAGLGALLLQRWSGLDHGSAFFASMPGGASEMANLAERHGVRVDMVAAAHSL 148 Query: 146 RVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSG 205 R+L V + + A+ H LLL L + AG V LR P+ Sbjct: 149 RMLLVVTLIPALFTLSGVHGADLY--HAAGRTLHYPGLLLLGALGLAAGWVWSRLRQPNP 206 Query: 206 TMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLS 265 M+ P+L +L + + LP W +A + IG +G F A R L + S Sbjct: 207 WMIGPLLVTVLLTASGIELSALPPWASPLAQLLIGCSLGSRFSPGFFRVAPRFLAAVAAS 266 Query: 266 IFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRL 325 L+ A L ++ T L T+PGG+ + + A + ++ A Q R+ Sbjct: 267 SGVLMLAAAAFGGALAWLAGLNPATVMLGTTPGGIAEMCLTAHALQLGVPVVTAFQVCRM 326 Query: 326 FSILLTGPAIARFISTYAPKR 346 ++L + R+++ +R Sbjct: 327 LCVVLLTDPLYRYLAVRLARR 347 >UniRef50_C6HYJ9 Putative ammonia monooxygenase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYJ9_9BACT Length = 388 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 133/315 (42%), Positives = 185/315 (58%), Gaps = 1/315 (0%) Query: 34 MIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLL 93 MIA F G ++LPR +AAQ ++G MI Q + I +T WP+ L +L +L Sbjct: 44 MIAAAAFGTSGAGIRLPRPLQIAAQGVVGVMIGQTVNPGIASTFLHTWPVFLGAVLSVVL 103 Query: 94 SSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGA 153 +S ++G +L R LPG T WG SPG A AM+ MA++YG D RLVAFMQY+RV V Sbjct: 104 ASNLLGGILGRMGVLPGTTAVWGLSPGAAQAMMVMAEEYGGDPRLVAFMQYVRVAVVVVT 163 Query: 154 AVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLA 213 A LV R+ G + A + + L ++ + +G L R+P+GT+L P+ Sbjct: 164 ASLVVRVWAGIHLVAPPPLPWFPALSPGSFLASLGVVAAGILLGRLSRVPAGTILGPLFL 223 Query: 214 GAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAIC 273 L + + P W LA AY +G IGLGF ++I ALR LP++LL+IFAL+ Sbjct: 224 AGALHATGHLATPFPRWFLAGAYGLLGVAIGLGFTREIFRHALRALPRVLLAIFALILFA 283 Query: 274 AGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGS-NADMALIMAMQTLRLFSILLTG 332 AG+A L RF+ ID +TAYLATSPGG+D+VAVIAA D+ +MA+QTLR +L+ G Sbjct: 284 AGVAALLVRFLGIDPLTAYLATSPGGMDSVAVIAASYPRLDVPFVMALQTLRFLFVLVAG 343 Query: 333 PAIARFISTYAPKRS 347 P++ARF+ T Sbjct: 344 PSLARFVVTRFVTPP 358 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 2/170 (1%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 + + +PA +LGP+ +AG + + + PR A +LG I Sbjct: 194 LASLGVVAAGILLGRLSRVPAGTILGPLFLAGALHATGHLATPFPRWFLAGAYGLLGVAI 253 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 T I P VL + +L +A V LLVR+ + T +SPGG ++ Sbjct: 254 GLGFTREIFRHALRALPRVLLAIFALILFAAGVAALLVRFLGIDPLTAYLATSPGGMDSV 313 Query: 126 VAMAQDY-GADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIV 174 +A Y D+ V +Q LR LFV A + R ++ Sbjct: 314 AVIAASYPRLDVPFVMALQTLRFLFVLVAGPSLARFVVTRFVTPPQPPAA 363 Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 1/114 (0%) Query: 208 LIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIF 267 L PM+A A + I LP L A +G IG + I L P L ++ Sbjct: 41 LGPMIAAAAFGTSG-AGIRLPRPLQIAAQGVVGVMIGQTVNPGIASTFLHTWPVFLGAVL 99 Query: 268 ALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQ 321 +++ + L R + TA SPG + V+A D L+ MQ Sbjct: 100 SVVLASNLLGGILGRMGVLPGTTAVWGLSPGAAQAMMVMAEEYGGDPRLVAFMQ 153 >UniRef50_A9BSE8 Membrane protein AbrB duplication n=8 Tax=Burkholderiales RepID=A9BSE8_DELAS Length = 364 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 10/354 (2%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 +L+ + + + + L + P +LGP+IA + S+ G Q I+G Sbjct: 9 LLRIALTLLGAFAAAQLCLWLRTPLPWMLGPLIATSLASILGAPTASAGRLRNGGQWIIG 68 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRY---------SSLPGNTG 113 + T +++ +A W + ++ LL G L R + T Sbjct: 69 ASLGLYFTPAVVQLIAGLWWAIAVAIVWALLLGWGFGAWLYRVHAPRMPQIPAGEMRATT 128 Query: 114 AWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHI 173 + + G A+ M +A+ A LVA LR++ V + + E + Sbjct: 129 YFAGAIGAASEMTLLAERENARTDLVAASHSLRLVIVTVSIPFALQWSGLHGLEGLTPPS 188 Query: 174 VWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLA 233 + L L +L + L+ + L +L +L +P+ L+ Sbjct: 189 I-RIVEWPGLALLAVLTGLGAWAMDRLKRANPWFLGALLVSMLLTMCGQELSAVPQALVN 247 Query: 234 MAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 +A + IG +G+ F ++ L A R L + + L+AICAG AW L + + ++T L Sbjct: 248 VAQLVIGISLGVRFKREFLHTAPRWLGSVAVGTVGLMAICAGFAWLLHLAVDLPWVTLLL 307 Query: 294 ATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 TSPGG+ +A+ A + ++ A Q RL ++LL + R++ P S Sbjct: 308 GTSPGGITEMAITAKVLQLGVPVVTAFQVCRLIAVLLLVAPLFRWVEARGPAAS 361 Score = 58.0 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 10/177 (5%) Query: 176 FPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMA 235 P + + LT+L A A + LR P ML P++A ++ T L Sbjct: 5 RPIFLLRIALTLLGAFAAAQLCLWLRTPLPWMLGPLIATSLASILGAPTASA-GRLRNGG 63 Query: 236 YMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRF---------MHI 286 IG +GL F ++ I ++I L + G L R Sbjct: 64 QWIIGASLGLYFTPAVVQLIAGLWWAIAVAIVWALLLGWGFGAWLYRVHAPRMPQIPAGE 123 Query: 287 DFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 T Y A + G + ++A NA L+ A +LRL + ++ P ++ + Sbjct: 124 MRATTYFAGAIGAASEMTLLAERENARTDLVAASHSLRLVIVTVSIPFALQWSGLHG 180 >UniRef50_A8IB98 Putative ammonia monooxygenase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IB98_AZOC5 Length = 366 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 78/331 (23%), Positives = 145/331 (43%), Gaps = 2/331 (0%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNL 69 + L+ F + P ++GP+I + G+ L+ + +LG + Sbjct: 19 LAIGLVGGCLFAWIRTPLPWIIGPIICCGFATFLGLPLKASSEGRIVGMLVLGVALGLYF 78 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T + + P+++A TL+ A +LL R + + T + S PGG A M + Sbjct: 79 TPEAAIAVLAHLPVIIAASGTTLVVGAAASFLLARTARIDHVTAFFCSVPGGVAEMSMVG 138 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILL 189 + +G +A Q LRV+ V ++ + + F P L +++ L Sbjct: 139 ERFGGRPMPIAVTQLLRVVSVTILIPTTLTLLGAGGSSTSALGALPFSP--TGLAVSLCL 196 Query: 190 AVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDK 249 A + R + +L PM G VL + +P WL A+ + +G IG FD+ Sbjct: 197 AFAFSALLARFRFRNAWLLGPMAVGCVLGLSEAGLSSVPPWLTAVGQVLMGAHIGAQFDR 256 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 ++ R +P L+++ L+A CAG+ + I LATSPGG+ + + A Sbjct: 257 ALITSMWRFIPAALINLGVLMAGCAGVGVLVAYVSGISPGNMVLATSPGGVTEMCITAKV 316 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIARFIS 340 + D+ +++A +R+F ++L+ P + R + Sbjct: 317 LHLDVPIVVAFHIVRIFLVILSAPYLFRLLR 347 Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 1/167 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCMI 65 + L+ S A LLGPM G + + L +P Q ++G I Sbjct: 191 AVSLCLAFAFSALLARFRFRNAWLLGPMAVGCVLGLSEAGLSSVPPWLTAVGQVLMGAHI 250 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 +++T++ P L L V + A VG L+ S + +SPGG M Sbjct: 251 GAQFDRALITSMWRFIPAALINLGVLMAGCAGVGVLVAYVSGISPGNMVLATSPGGVTEM 310 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH 172 A+ D+ +V +R+ V +A + R++ + Sbjct: 311 CITAKVLHLDVPIVVAFHIVRIFLVILSAPYLFRLLRATGVMPMPPT 357 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 69/166 (41%), Gaps = 1/166 (0%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 + L + + +V G + +R P ++ P++ L ++ + + +G Sbjct: 15 VALGLAIGLVGGCLFAWIRTPLPWIIGPIICCGFATFLGL-PLKASSEGRIVGMLVLGVA 73 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +GL F + + L LP I+ + L + A ++ L R ID +TA+ + PGG+ Sbjct: 74 LGLYFTPEAAIAVLAHLPVIIAASGTTLVVGAAASFLLARTARIDHVTAFFCSVPGGVAE 133 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 ++++ I Q LR+ S+ + P + SA Sbjct: 134 MSMVGERFGGRPMPIAVTQLLRVVSVTILIPTTLTLLGAGGSSTSA 179 >UniRef50_C5DA14 Membrane protein AbrB duplication n=2 Tax=Geobacillus RepID=C5DA14_GEOSW Length = 355 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 65/337 (19%), Positives = 144/337 (42%), Gaps = 2/337 (0%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAILGCMIAQ 67 +++ L + F +H P +LG + +++ ++ + P++ + +LG Sbjct: 6 TYIVAGLTGLLFYRLHSPIPWMLGAITGMLVWKTVIKRPVAAPKALSNSGLIVLGTYFGL 65 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 + T L T+A L ++ ++ + I + +++ + T + S PGG + MVA Sbjct: 66 SFTKETLLTIAPYIVPFLVATVLLIVINIINSIAVTKWTHIDKVTSVFASVPGGLSEMVA 125 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTI 187 ++ A+ LV Q +R+L V V L +A + + Sbjct: 126 ASESLNANTALVTIFQTIRLLTVVFLVPTVVVHWLSGDASSGSTTAQAAASSFDGHYTWF 185 Query: 188 LLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF 247 LL++ + + +P+ ++ P+ AV+ + LP WL+ +A +++G +G Sbjct: 186 LLSIFGALLLRNI-IPAAYVVGPLAVTAVMHVAGVNLPPLPVWLIILAQISVGINMGERI 244 Query: 248 DKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307 + + + L L+A+ G + + TA L+ +PGGL + + A Sbjct: 245 TLEDIKLGGKFSWVYFLLALVLIALSFGFGYVFAELTDLPLSTALLSLAPGGLVEMVLTA 304 Query: 308 AGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 D A++ ++Q +RL +++ P + +++ P Sbjct: 305 QTVGGDPAIVSSLQFVRLLLVIIVVPNVLKWVFRKFP 341 Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 68/144 (47%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 +L T ++A + G + L P ML + V ++ + P+ L + +G Sbjct: 3 VLETYIVAGLTGLLFYRLHSPIPWMLGAITGMLVWKTVIKRPVAAPKALSNSGLIVLGTY 62 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 GL F K+ LL + L++ L+ I + +T++ HID +T+ A+ PGGL Sbjct: 63 FGLSFTKETLLTIAPYIVPFLVATVLLIVINIINSIAVTKWTHIDKVTSVFASVPGGLSE 122 Query: 303 VAVIAAGSNADMALIMAMQTLRLF 326 + + NA+ AL+ QT+RL Sbjct: 123 MVAASESLNANTALVTIFQTIRLL 146 >UniRef50_C9S1X9 Membrane protein AbrB duplication n=5 Tax=Geobacillus RepID=C9S1X9_GEOSY Length = 384 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 158/343 (46%), Gaps = 6/343 (1%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILGCMI 65 + V++ L F +P +LGP A ++ L P AA +G + Sbjct: 16 ALTLVIAALGGFIFALFGVPLHWMLGPAAALLLVGRFWKGKLYWPVGIRNAALIPIGYTL 75 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 ++T L + P++L ++ LL S +V L+ R++ +P + GS PGG + M Sbjct: 76 GTSMTAGTLVEMGRQLPVMLLATVLILLFSFLVSCLVARWTRIPLRSVVTGSIPGGLSQM 135 Query: 126 VAMAQDY-GADIRLVAFMQYLRVLFVAGAAVLVTR---MMLGDNAEAVNQHIVWFPPVSI 181 + + ++ G D +V F Q +R++ V L+ G A + Sbjct: 136 LVLGEELDGVDATIVTFFQVMRLMGVVFLVPLIVLSPFFSGGAEAGTGAESGQEAHWSVG 195 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 + L +++ V + +G ++LP+ +L P++ + L LP LL +A +A+G Sbjct: 196 LVWLYVIVTVASAIIGRRIKLPTAYLLGPIIGTSALVMAGTPAPHLPAPLLDIAQIAMGA 255 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +GL + R + + + AL+ A+ LT + ++TA++A +PGG+D Sbjct: 256 YLGLMLKPARIAEKGRAVLAAVATGLALILFSMASAFVLTVLHGVPYLTAFIALAPGGMD 315 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR-FISTYA 343 + ++A ++AD+A++ + Q R+F ILL P + + + + Sbjct: 316 QMGILAREAHADLAVVTSYQMFRIFFILLVVPPVLKKWFAARW 358 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 1/155 (0%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 + LT+++A + G + L +P ML P A ++ + P + A + IG+ Sbjct: 15 IALTLVIAALGGFIFALFGVPLHWMLGPAAALLLVGRFWKGKLYWPVGIRNAALIPIGYT 74 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G L+ R LP +LL+ +L ++ + R+ I + + PGGL Sbjct: 75 LGTSMTAGTLVEMGRQLPVMLLATVLILLFSFLVSCLVARWTRIPLRSVVTGSIPGGLSQ 134 Query: 303 VAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIA 336 + V+ D ++ Q +RL ++ P I Sbjct: 135 MLVLGEELDGVDATIVTFFQVMRLMGVVFLVPLIV 169 >UniRef50_C3KNJ9 Possible monooxygenase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNJ9_RHISN Length = 362 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 136/332 (40%), Gaps = 1/332 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P + + + + F HLP +LG ++A ++ S+ + + +P ++ Sbjct: 14 PYRKLLLALAIGFIGGCIFFYFHLPLPWMLGSLVACLVASLFNMPVAVPGIVRPPMLMLV 73 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G ++ T ++ ++ P + +++ +L++ R T + PGG Sbjct: 74 GVVLGSGFTPAMAGSMIDWLPGLGILMVFVVLTAGCSYVYFRRVGGFDHWTAFFSGMPGG 133 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 M A+ YGA+ R +A + R++ V V ++ G +++ I Sbjct: 134 LVEMTALGDAYGANTRAIALVHSSRIMLVVLTLPFVLTVVGGQTLAGISRSGASVLEAPI 193 Query: 182 NL-LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 + L + +G LL +PS ++ PMLA A + L P ++A A + +G Sbjct: 194 SAELWLFGTGLCGAVLGRLLSMPSPFLMGPMLASAAVHLTGLSAFHAPWEIIAFAQLVLG 253 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 +G F L L + S L+A A ++ ++ LA SPGGL Sbjct: 254 SALGCSFAGVKKSSILHILRLSVGSTAFLVAASTSCALLVSHLTGSPILSLLLAYSPGGL 313 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTG 332 +++A + D+A + LR+F + ++ Sbjct: 314 TETSLMALSLHVDVAFVATHHVLRVFFVAVSA 345 >UniRef50_B9R4Z7 Putative ammonia monooxygenase superfamily n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R4Z7_9RHOB Length = 367 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 76/344 (22%), Positives = 150/344 (43%), Gaps = 5/344 (1%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 ++ +++ F LPAA L G MI ++ G+ +P +LG Sbjct: 11 KFPATLAIAVAGGAVFHLAGLPAAWLSGAMILVAAATLAGVPTVMPNKFRDGLFVLLGIS 70 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYS-SLPGNTGAWGSSPGGAA 123 + + ++ ++ WP+ +A+LL+ ++ I G+ ++RY+ T +G+ PG A Sbjct: 71 MGAGVQPEVVERVS-EWPLSMAMLLLVVVGVTIAGYCVLRYAAHWQKETAFFGAIPGTLA 129 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 ++A+A + AD+ +A Q +R+ F+ +A + Sbjct: 130 YVIALASERRADLPRIASTQSVRLFFLIALLPFAVVSTTDTDASITVSRYTSD---LWDY 186 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 + + L ++ + +R P G M A L + + + LPE ++ + +A+G I Sbjct: 187 AIGVPLCILGSLLAVKVRFPGGWMTGAFFTSAGLNASGAVHLVLPESIVLICMVAMGALI 246 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G F++ + L + + A ++ A ++ + I F A LA +PGGL+ + Sbjct: 247 GCRFNEMTFREFVSVLSASVSAFAAAFSVSVAGAGFVSWMIDIPFGQALLAFAPGGLEVM 306 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 ++A + D A + A Q +R ++L PAI AP+ S Sbjct: 307 TLMAFVLDLDPAFVAAHQIVRFTGMVLLLPAITLITIGRAPQSS 350 Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 1/156 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 T+ +AV G V L LP+ + M+ A + T+ +P ++ +G Sbjct: 10 WKFPATLAIAVAGGAVFHLAGLPAAWLSGAMILVAAATLAGVPTV-MPNKFRDGLFVLLG 68 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 +G G +++ R + + + ++ + L H TA+ PG L Sbjct: 69 ISMGAGVQPEVVERVSEWPLSMAMLLLVVVGVTIAGYCVLRYAAHWQKETAFFGAIPGTL 128 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 V +A+ AD+ I + Q++RLF ++ P Sbjct: 129 AYVIALASERRADLPRIASTQSVRLFFLIALLPFAV 164 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 1/183 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGC 63 + + L +L S+ + V P + G + G + L LP S L +G Sbjct: 185 DYAIGVPLCILGSLLAVKVRFPGGWMTGAFFTSAGLNASGAVHLVLPESIVLICMVAMGA 244 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 +I ++ S + +P +PGG Sbjct: 245 LIGCRFNEMTFREFVSVLSASVSAFAAAFSVSVAGAGFVSWMIDIPFGQALLAFAPGGLE 304 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 M MA D VA Q +R + +T + +G ++ + + + Sbjct: 305 VMTLMAFVLDLDPAFVAAHQIVRFTGMVLLLPAITLITIGRAPQSSDATGHTSTIATPDK 364 Query: 184 LLT 186 +T Sbjct: 365 PMT 367 >UniRef50_C4XND2 Hypothetical membrane protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XND2_DESMR Length = 366 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 162/345 (46%), Positives = 225/345 (65%), Gaps = 3/345 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 QW L L++LL+ GF A+ LPAALLLGPM+AGI ++ G +++LP + F+ AQA++GC+ Sbjct: 6 QWLGLLALTVLLAAGFSALELPAALLLGPMVAGIAVALGGASIRLPDTPFVLAQAVVGCL 65 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 IA+ + ++L +W + ++L +++SA +G +L R +PG T WG+SPGGAAA Sbjct: 66 IARAASPAVLPEFLSHWHLFSLVILAGIVASAAMGLVLCRLRVMPGTTAIWGASPGGAAA 125 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 MV MA GAD RLVAFMQYLRVL VA AA +V R + +Q VW PP++ L Sbjct: 126 MVVMADACGADARLVAFMQYLRVLCVALAATVVAR--AAGGSAPPHQATVWLPPLTAGLA 183 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 + L + G RL G ML+PM GA L+ L+ I+LP WLLA AY AIGWR+G Sbjct: 184 PALGLIGLGALAGLCTRLSGGAMLVPMFLGAALRLTGLVEIDLPPWLLAAAYAAIGWRVG 243 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 LGF +++ L A R +P IL+ I AL+A C G++W L + +D +TAYLA SPGG+D+VA Sbjct: 244 LGFTQKVALYAARAVPAILVGILALIAFCGGLSWLLAKTTGMDPLTAYLAASPGGMDSVA 303 Query: 305 VIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 VIAA S D A++M MQT+R F ++L P +ARF++ A R Sbjct: 304 VIAASSPGVDFAVVMTMQTMRFFLVVLLAPPMARFLAGRAEARGG 348 >UniRef50_C0Z7B6 Conserved hypothetical membrane protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7B6_BREBN Length = 355 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 75/330 (22%), Positives = 147/330 (44%), Gaps = 6/330 (1%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGCMIAQNLTGSILTTLA 78 F +H P LLG ++ +I +M G+ L +PR A ++G + +T I+ T+ Sbjct: 19 FATIHSPLPWLLGALVTTVICNMLGVKNLWIPRWFRQAGLTVIGITLGLRMTSEIVDTMT 78 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 + ++L ++T+L S + W+ + + G T + + PGG + MV++ Q G + ++ Sbjct: 79 GHVGLMLITTILTILISLVNAWIFYKICRVDGITAIFSNIPGGLSEMVSVGQMAGGNQQV 138 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGC 198 + +R + V + + A ++ ++ ++ + Sbjct: 139 ITIFHSIRAISVVLCTPYLVAFLPTHAAIQTATTEHVLGIGQT--VMILVAGLIGALIAS 196 Query: 199 LLRLPSGTMLIPMLAGAVLQSGQLI---TIELPEWLLAMAYMAIGWRIGLGFDKQILLRA 255 +P+ +L +L A++ + + LP L+ A + IG IGLGF ++ +++ Sbjct: 197 RCYIPAPFLLGALLVTALISMNTSLVGESPALPSILVQGAQIFIGVSIGLGFKREDIVKN 256 Query: 256 LRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMA 315 R L+ L + +A G++ D +TA LAT PGGL +++ A + AD Sbjct: 257 RRFFLFGLMHSLFLFVMVIVLAIGISYVTATDIVTAILATVPGGLAEMSLTALATGADPL 316 Query: 316 LIMAMQTLRLFSILLTGPAIARFISTYAPK 345 L+ A RL +L AR + Y + Sbjct: 317 LVTAFHLFRLVLVLTLFSFGARAWTNYHSR 346 >UniRef50_Q4KE96 Ammonia monooxygenase family protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KE96_PSEF5 Length = 356 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 129/342 (37%), Positives = 205/342 (59%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 LQW +L+ + + +PA LGPM+ I+F + G ++++PR AF Q +G Sbjct: 15 ALQWPAWLLLAGISGQLLKYLEIPAGQFLGPMLTAILFGVCGASIRVPRLAFRLGQGSVG 74 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + A ++T ++LT + +W ++L L+T+ SA+VG +LVR+ ++ +T AWG++PG A Sbjct: 75 MLAAHSMTLAVLTAMLQSWHVMLVATLLTVSLSALVGLVLVRFGAIAASTAAWGTAPGAA 134 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 +AMV+MA ++GAD R+VA MQY+RV+ V LV+ + + + Sbjct: 135 SAMVSMADEFGADSRVVATMQYVRVVCVVMVGALVSHWIGAPASGSEAHASQMALHGMSL 194 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 + + + + V R+P+G +L+P+L G LQ L+ I LP WLLA AY AIG Sbjct: 195 PNVGLSIVAIVCGVLLGSRVPAGALLVPLLLGGALQVSGLLQISLPSWLLACAYGAIGGY 254 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGL FD+ L LP ++ L+A+CA AWGL +M DF++ YLATSPGGLD Sbjct: 255 IGLRFDRPTLSYVFGHLPAMIGGALLLIALCALSAWGLALWMGKDFLSFYLATSPGGLDA 314 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 +A+IA +++D+ L++AMQTLRLF+++++G AR I ++ Sbjct: 315 MAIIAVDTHSDVGLVLAMQTLRLFAVIVSGAFFARLIIKWSR 356 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 1/171 (0%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 P ++ +LLA ++G + L +P+G L PML + +I +P + Sbjct: 13 PQALQWPAWLLLAGISGQLLKYLEIPAGQFLGPMLTAILFGVCG-ASIRVPRLAFRLGQG 71 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 ++G +L L+ +L++ +++ A + L RF I TA T+P Sbjct: 72 SVGMLAAHSMTLAVLTAMLQSWHVMLVATLLTVSLSALVGLVLVRFGAIAASTAAWGTAP 131 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 G + +A AD ++ MQ +R+ +++ G ++ +I A A Sbjct: 132 GAASAMVSMADEFGADSRVVATMQYVRVVCVVMVGALVSHWIGAPASGSEA 182 >UniRef50_Q09A72 AbrB protein n=2 Tax=Cystobacterineae RepID=Q09A72_STIAU Length = 355 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 109/322 (33%), Positives = 165/322 (51%), Gaps = 3/322 (0%) Query: 24 HLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWP 82 H+PA LLG M ++ + + + +PR AQA+LG I +LT TLA NWP Sbjct: 33 HVPAGALLGGMGVSLAAALLLSVHVPVPRWLMTGAQAVLGTAICASLTSEAWATLAENWP 92 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 + L ++ + S V L R++ + T G PGGA+AM A++ + GAD RLV F Sbjct: 93 VALINVVGVVGVSQAVALLFSRWTGVDALTATLGLLPGGASAMTALSGEVGADERLVTFF 152 Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI--NLLLTILLAVVAGTVGCLL 200 QYLR+ V AV V+R D + V+ V + ++ L+A+ T G L Sbjct: 153 QYLRLSIVILVAVGVSRWTGADASLQVSPEAVLDTSSLPWKDWGVSTLVALGGATAGIRL 212 Query: 201 RLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLP 260 +LP+G L P+L G L + L P LL ++ +G R+G F+++ + R Sbjct: 213 KLPAGAFLGPLLVGIPLTALGLPVGAWPMGLLPLSLWTLGTRVGSRFNEEAVRELKRVAL 272 Query: 261 QILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAM 320 L + AL+ C +AWG + +D +TAY ATSPGG D+V IA G++A + L++A+ Sbjct: 273 AALGASSALVGGCVLLAWGWSALGEVDMLTAYFATSPGGADSVLAIALGTHASLTLVLAV 332 Query: 321 QTLRLFSILLTGPAIARFISTY 342 Q RL + L P R + Sbjct: 333 QVGRLLFVFLVAPLYLRRMHRR 354 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 65/161 (40%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 P + + ++ + +P+G +L M + + +P WL+ A Sbjct: 10 PSRFRVWAVTVATLLGAALAEAAHVPAGALLGGMGVSLAAALLLSVHVPVPRWLMTGAQA 69 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 +G I + P L+++ ++ + +A +R+ +D +TA L P Sbjct: 70 VLGTAICASLTSEAWATLAENWPVALINVVGVVGVSQAVALLFSRWTGVDALTATLGLLP 129 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 GG + ++ AD L+ Q LRL ++L ++R+ Sbjct: 130 GGASAMTALSGEVGADERLVTFFQYLRLSIVILVAVGVSRW 170 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 1/160 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQA 59 +P WG+ +++L + + + LPA LGP++ GI + G+ + P + Sbjct: 190 LPWKDWGVSTLVALGGATAGIRLKLPAGAFLGPLLVGIPLTALGLPVGAWPMGLLPLSLW 249 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 LG + + L L + ++ W + T + +SP Sbjct: 250 TLGTRVGSRFNEEAVRELKRVALAALGASSALVGGCVLLAWGWSALGEVDMLTAYFATSP 309 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTR 159 GGA +++A+A A + LV +Q R+LFV A L R Sbjct: 310 GGADSVLAIALGTHASLTLVLAVQVGRLLFVFLVAPLYLR 349 >UniRef50_Q167T9 Putative uncharacterized protein n=7 Tax=Rhodobacterales RepID=Q167T9_ROSDO Length = 365 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 72/338 (21%), Positives = 136/338 (40%), Gaps = 3/338 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 L++ V +L + F + LP L+GP+ A + ++ G ++ A + ILG Sbjct: 24 ALRYVTPFVFALSGAWLFHVLDLPLPWLIGPIAACLAAALMGFKMRAIAPVNAAMRTILG 83 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + T +IL+ + W +L I ++ +A+ + T + + PGG Sbjct: 84 VAVGATFTPAILSLMVDMWVTLLLIPVMICCVAAVGVPYFQKLWGYDFATSYYSAMPGGL 143 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTR-MMLGDNAEAVNQHIVWFPPVSI 181 M+ ++ G + R ++ + R+L + A + + D + + P Sbjct: 144 QDMLVFGEEAGGNPRTLSLIHATRILVIVTALPFLLQSFWSADLSTPPGAPLTSIAP--G 201 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 L + ++ A + + L+ L ++L PM+ +++ + P + A IG Sbjct: 202 QLTVMLICAALGWYLANLVGLFGASILGPMIFAGAAAVTEVLIVRPPAEAIWAAQFFIGM 261 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G+ + L L L LL I + A LA +PGG Sbjct: 262 TVGVKYSGITLDEVRHDLAAGLGYCVVLLLITFVFVEIVYIAGLAPGREALLAFAPGGQA 321 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 +AV+A ADMA ++A R+ I++ P ARF Sbjct: 322 EMAVLALIVGADMAFVIAHHVFRIIVIIIGAPLFARFF 359 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 1/157 (0%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMI-AGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 ++ + + L V L A +LGPMI AG + ++ P A AAQ +G + Sbjct: 205 VMLICAALGWYLANLVGLFGASILGPMIFAGAAAVTEVLIVRPPAEAIWAAQFFIGMTVG 264 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 +G L + + L +V LL + + ++ PG +PGG A M Sbjct: 265 VKYSGITLDEVRHDLAAGLGYCVVLLLITFVFVEIVYIAGLAPGREALLAFAPGGQAEMA 324 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG 163 +A GAD+ V R++ + A L R Sbjct: 325 VLALIVGADMAFVIAHHVFRIIVIIIGAPLFARFFGA 361 >UniRef50_D2RND1 Membrane protein AbrB duplication n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RND1_ACIFE Length = 356 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 143/336 (42%), Gaps = 10/336 (2%) Query: 23 VHLPAALLLGPMIAG-IIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 + +P +LG + G ++ + T PRS + G I N T L+ Sbjct: 20 LSVPIPYMLGGIAVGFLLRTFLDNTFFWPRSWRGLMLGVAGYGIGSNCTPDTFFKLSQET 79 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYG-ADIRLVA 140 L L TL S V + R++ + G PGG AM + DY AD +V Sbjct: 80 LGTLGASLFTLAVSVAVAVYMHRHTFANLLSSIMGCLPGGLTAMTVLMDDYEEADENVVV 139 Query: 141 FMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPP-------VSINLLLTILLAVVA 193 Q LR+ V + L+ + G + +W LL + + +V Sbjct: 140 VSQCLRLFVVEISVPLLAINLFGGQVTRLAGVGLWDASRADFLSLFHPGWLLVVPVVLVG 199 Query: 194 GTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILL 253 T+ + +P+G +L P++ A+L +P +A A + IG IG D++ LL Sbjct: 200 QTLAKKIHMPTGQLLGPIMITALLALWMGRVPRVPAPAMAFAQLHIGLYIGTMLDREKLL 259 Query: 254 RALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 + +P +LL ++A AG++ L+R +TA+LA +PGG+ + + + D Sbjct: 260 KTRALIPNVLLGSLLMVASSAGLSLLLSRLYGFTTLTAFLALAPGGIAEMCLTGLEMHQD 319 Query: 314 MALIMAMQTLRLFSILLTGPAIAR-FISTYAPKRSA 348 +A+I+ Q +R+ + + P + R F K+ Sbjct: 320 VAVILTYQLVRVLMLAMGVPFVIRKFFKPSGEKKQG 355 Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 1/163 (0%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCM 64 W ++ + L+ +H+P LLGP++ + ++ G ++P A AQ +G Sbjct: 189 WLLVVPVVLVGQTLAKKIHMPTGQLLGPIMITALLALWMGRVPRVPAPAMAFAQLHIGLY 248 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 I L L P VL L+ + SSA + LL R T +PGG A Sbjct: 249 IGTMLDREKLLKTRALIPNVLLGSLLMVASSAGLSLLLSRLYGFTTLTAFLALAPGGIAE 308 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAE 167 M + D+ ++ Q +RVL +A V R + E Sbjct: 309 MCLTGLEMHQDVAVILTYQLVRVLMLAMGVPFVIRKFFKPSGE 351 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 1/140 (0%) Query: 198 CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALR 257 L +P ML + G +L++ T P + G+ IG + + Sbjct: 18 RQLSVPIPYMLGGIAVGFLLRTFLDNTFFWPRSWRGLMLGVAGYGIGSNCTPDTFFKLSQ 77 Query: 258 PLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG-SNADMAL 316 L + LA+ +A + R + +++ + PGGL + V+ AD + Sbjct: 78 ETLGTLGASLFTLAVSVAVAVYMHRHTFANLLSSIMGCLPGGLTAMTVLMDDYEEADENV 137 Query: 317 IMAMQTLRLFSILLTGPAIA 336 ++ Q LRLF + ++ P +A Sbjct: 138 VVVSQCLRLFVVEISVPLLA 157 >UniRef50_C5SZI4 Membrane protein AbrB duplication n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZI4_ACIDE Length = 364 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 139/336 (41%), Gaps = 11/336 (3%) Query: 19 GFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLA 78 F +H P +LGP++A + +++G++ + + Q ++G + T +I+T L Sbjct: 20 IFRRLHTPVPWMLGPLLATALSTLKGLSTRSSLRLRNSGQWVMGASLGLYFTPAIVTQLC 79 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLV-----RYSSLP----GNTGAWGSSPGGAAAMVAMA 129 W VLA + +L + G L R + + + + G A+ M +A Sbjct: 80 ALWWAVLAAVAWSLALGMVYGCWLYSSCAGRLHGVDDAALRPSAYFAGAIGAASEMTLLA 139 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVN--QHIVWFPPVSINLLLTI 187 + A LVA LR+L V + + V +V P Sbjct: 140 EKESARTDLVAASHSLRMLIVVLVMPFGMLLAKSWWSLEVVSLAPLVSPPFTLTGAAWLA 199 Query: 188 LLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF 247 LL V G +LRLP+ L P+L L + + +P L A + IG +G+ F Sbjct: 200 LLTVAGGLALHVLRLPNPWFLGPLLVAITLAATETAPATVPMLLSNAAQLVIGVSLGVRF 259 Query: 248 DKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307 Q L A R L ++ L L+A CA L + TA L T+PGG+ +++ A Sbjct: 260 SPQFLHTAPRWLARVALGTVGLIAACAAFGVFLAWVTGLHPATAILGTAPGGMTEMSITA 319 Query: 308 AGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 + ++ A+Q RL ++L+ RF + Sbjct: 320 KALQLGVPVVTALQVTRLVAVLVLVRPAYRFWAARL 355 Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 1/164 (0%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGI-IFSMRGITLQLPRSAFLAAQAILGCMIAQ 67 L +L++ + + LP LGP++ I + + +P AAQ ++G + Sbjct: 198 LALLTVAGGLALHVLRLPNPWFLGPLLVAITLAATETAPATVPMLLSNAAQLVIGVSLGV 257 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 + L T V + + + A G L + L T G++PGG M Sbjct: 258 RFSPQFLHTAPRWLARVALGTVGLIAACAAFGVFLAWVTGLHPATAILGTAPGGMTEMSI 317 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ 171 A+ + +V +Q R++ V R + ++ Sbjct: 318 TAKALQLGVPVVTALQVTRLVAVLVLVRPAYRFWAARLHDGMHP 361 >UniRef50_D1VJI4 Membrane protein AbrB duplication n=1 Tax=Frankia sp. EuI1c RepID=D1VJI4_9ACTO Length = 415 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 105/353 (29%), Positives = 170/353 (48%), Gaps = 8/353 (2%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAIL 61 L W L + LLS V +PAA LL M+ G ++ G+ +LP A A+Q ++ Sbjct: 56 ALGWIALIAICFLLSDLGEHVGIPAAQLLVSMLVGAALALAGVVRRRLPARANRASQVVV 115 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G ++ L S L+ ++ + L ++ V L R + G G PGG Sbjct: 116 GVLMGSYLAPSALSAATGRALPLIGVTLASIAICVAVAGALTRRTRATGVDTTLGLMPGG 175 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ------HIVW 175 +AA+VA A + GAD R VAF QYLRV VA + L+ + + + + H+V Sbjct: 176 SAAIVAYATELGADSRFVAFAQYLRVGVVAASTPLIVAALGRNPGSSHSGRSLSFSHLVA 235 Query: 176 FPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPE-WLLAM 234 P L + ++ + LRLP+ +L PM A + L P L + Sbjct: 236 SPHQVAGLAMLTATGLLGVGLARRLRLPAPALLGPMFLTAAILWTDLTGGFSPAGSLRDI 295 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 A++ +G +GL FD + R L +L + A+ CAG+AW L+ + + F +YLA Sbjct: 296 AFVLVGLEVGLRFDLASVRYLGRMLGYLLGASVAVCLACAGLAWALSALVGMSFTDSYLA 355 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 T+PGG++ + AA ++AD+ +I A+Q++RL ++ I R + + RS Sbjct: 356 TTPGGINAILATAASAHADLPVIAAVQSVRLLLVIALTAPIIRAATRWRAFRS 408 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 69/192 (35%) Query: 150 VAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLI 209 V +A G + + ++ + I + + +G + +P+ +L+ Sbjct: 26 VGVSAPGPAGCSTGKSRIFSSATGRARARSALGWIALIAICFLLSDLGEHVGIPAAQLLV 85 Query: 210 PMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFAL 269 ML GA L ++ LP + + +G +G L A ++ A Sbjct: 86 SMLVGAALALAGVVRRRLPARANRASQVVVGVLMGSYLAPSALSAATGRALPLIGVTLAS 145 Query: 270 LAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSIL 329 +AIC +A LTR + L PGG + A AD + Q LR+ + Sbjct: 146 IAICVAVAGALTRRTRATGVDTTLGLMPGGSAAIVAYATELGADSRFVAFAQYLRVGVVA 205 Query: 330 LTGPAIARFIST 341 + P I + Sbjct: 206 ASTPLIVAALGR 217 >UniRef50_C9KL73 Putative membrane protein AbrB duplication n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL73_9FIRM Length = 352 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 84/344 (24%), Positives = 149/344 (43%), Gaps = 5/344 (1%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCMIAQ 67 +LS+L I ++ P LGP++ + S+ R A +LG + + Sbjct: 6 TLILSILGGIAMTYLNAPLPWTLGPIVFVALGSLIRKRPFHWSLRIRNTALILLGYAMGR 65 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 T + +P+++ +T+ + + WL+ R++ + + G PGG + MV Sbjct: 66 PFTLETGRAILAQFPLMITATCITVAAGVLTAWLMFRHTKINFTSCLLGCVPGGLSQMVI 125 Query: 128 MAQD-YGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHI--VWFPPVSINLL 184 +A + AD+ V MQ LR+L V +T +L ++ A V +L Sbjct: 126 LADEIRDADLTAVTIMQTLRMLSVVFVIPFLTIHVLAGSSHAAASAGTAVHAAGSLAEIL 185 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAV-LQSGQLITIELPEWLLAMAYMAIGWRI 243 +AV+ + + LP+ ML P+L+ A + +P + A + +G I Sbjct: 186 TYAAVAVLGAVLAKKIHLPTAPMLGPILSTAAFVVITGTAAPVVPVHYINAAQVLVGAYI 245 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G D L + +L + +L + GM ++ D TA+LAT+PGGL + Sbjct: 246 GSSVDLTRLHQYHGMGKVLLGGVLLVLLVSMGMGCIISEVTGTDLATAFLATAPGGLTEM 305 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 + A AD + ++A Q RL I+L P IAR I +++ Sbjct: 306 GITALVVGADSSTMVAYQLTRLLFIMLVFPYIARAIVALYRRKT 349 >UniRef50_B6ITE5 Ammonia monooxygenase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITE5_RHOCS Length = 378 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 79/347 (22%), Positives = 141/347 (40%), Gaps = 4/347 (1%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 L F +H+P A ++G +++ +M G+ + +PR A +LG Sbjct: 23 WRGLAATLGLGAAGGSLFFLLHVPLAFMIGALVSVTAAAMAGVRVSVPRRLRTAMVVVLG 82 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 M+ ++L L+ + ++L T+ ++ L R + G T + + PGG Sbjct: 83 IMLGSAFRPAMLEHLSEWAVSLGGLVLYTVAAALAGLLYLRRVARYDGVTAYFTAMPGGF 142 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 MV M G D R +A +R++ +++ G A + + P I+ Sbjct: 143 QEMVLMGAAMGGDDRTIALAHSMRIMLTVLTVPFAFQLLPGFAPAARDWSLGGLGPGLID 202 Query: 183 LLL----TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 L L + + V LR+P+G ++ PML A + L + P L+A A + Sbjct: 203 LPLRDVALLAACALGAPVAQRLRIPAGMLVGPMLLSAAVHLSGLTVGKPPGLLVAAAQVV 262 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 +G IG F L + L ALLA+ MA + +D LA +PG Sbjct: 263 VGAGIGCRFVGVPLRTIVAVAAAALGLTVALLAVTVLMALSVHLLTGLDLAALILAYAPG 322 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 GL ++++A + D A + R+ I++ P R + + Sbjct: 323 GLAEMSLVALSLHVDAAFVATHHIARIVLIVIFAPLAWRLWQAHRRR 369 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 58/153 (37%), Gaps = 1/153 (0%) Query: 21 LAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 + +PA +L+GPM+ + G+T+ + P AAQ ++G I G L T+ Sbjct: 222 QRLRIPAGMLVGPMLLSAAVHLSGLTVGKPPGLLVAAAQVVVGAGIGCRFVGVPLRTIVA 281 Query: 80 NWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLV 139 L + + L + ++ + + L +PGG A M +A D V Sbjct: 282 VAAAALGLTVALLAVTVLMALSVHLLTGLDLAALILAYAPGGLAEMSLVALSLHVDAAFV 341 Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH 172 A R++ + A L R+ Sbjct: 342 ATHHIARIVLIVIFAPLAWRLWQAHRRRGAGTP 374 >UniRef50_Q9RC51 BH3837 protein n=3 Tax=Bacillus RepID=Q9RC51_BACHD Length = 343 Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 143/335 (42%), Gaps = 2/335 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 G+ +++ + F A +PA LLG +++G++ ++ + LP F A +G I Sbjct: 5 GVFLAVTVAVGALFAAFQVPAGWLLGSLLSGMVCTLWIKKIMLPDRLFKWTLAAIGGNIG 64 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 L + L++TL ++G L R+S++ NT + PGGA+ ++ Sbjct: 65 FMLRPEQFLQYHSLLGPFVVTLVLTLCGGILLGKFLKRFSNVNHNTAFFCCMPGGASEVI 124 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT 186 A+++DYGAD R+VA R+ F L + + + + + L Sbjct: 125 ALSKDYGADQRIVAAFHTTRITFFVFVIPLFVGLNV-TGRTGLGTMFLPLDETLLALGAL 183 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 + + V+ + + P ++ + G ++ I LP ++ +A +G IG Sbjct: 184 MAVVVLTIFLSKHVTFPGASLFFAIGLGFLVH-TLFPQIILPGYVQGVAQGVMGAVIGAR 242 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 FD++ R +++ + G+A T +++ + L+ P G +A Sbjct: 243 FDRETFGELKRMGFISAITLLLYFIMSLGLAGLFTWMTPLEWYMSLLSIVPAGAAEMAST 302 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 A + A++ +Q R+ ++ L P + ++ S Sbjct: 303 ATALQMEPAMVATLQMARVLALFLCLPFLIKWFSK 337 >UniRef50_C2AL91 Membrane protein AbrB duplication n=7 Tax=Corynebacterineae RepID=C2AL91_TSUPA Length = 363 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 169/349 (48%), Gaps = 3/349 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAIL 61 +W +LC S L+I + +P+A L ++ I ++ G + +PR A AAQ +L Sbjct: 8 ARRWALLCASSCALAICLARLGVPSAPLFAALVCAIAIALAGRSPGDIPRPAQYAAQGVL 67 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G I + + L WP L I L TLL S G LL + TG+ GG Sbjct: 68 GAYIGTLMQAHTVAALGTRWPAALLIGLATLLLSVAAGALLGLHRDTDSITGSLALVAGG 127 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+ +VA+A++ G D VA +QYLRV+ V + +V + + P Sbjct: 128 ASGLVAIARELGGDETTVAVVQYLRVILVTVSLPVVAALYPHVAGASSALTSGPGRPWWF 187 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIE-LPEWLLAMAYMAIG 240 +L T V +G L LP+G +L P+L A + T +P L+A Y+ IG Sbjct: 188 DLGFTAACVVAGVVLGRLSHLPAGGLLGPLLISATASLTGIATGATVPWILVAAGYLVIG 247 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 W+ G+GF ++ L R LP + + A+ A CA + + L+ + + YLAT+PGG+ Sbjct: 248 WQAGVGFTREALRSLARLLPWATILVIAIGAGCAALGFALSAMTGVPLLDGYLATTPGGI 307 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR-FISTYAPKRSA 348 V +AA SN D+ I+A Q +R+ ++L PA AR F RSA Sbjct: 308 YAVLAVAASSNVDITFIVAAQLIRVMAMLFLAPAAARGFQRWRGTHRSA 356 >UniRef50_C4LH35 Putative membrane protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LH35_CORK4 Length = 364 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 95/340 (27%), Positives = 162/340 (47%), Gaps = 3/340 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAIL 61 ++ W + + +L+ LP+ L+LG M+ G+ ++ ++ PRS +Q ++ Sbjct: 14 LVGWTIAIIATLVAVGLCRVAQLPSPLMLGAMVGGLCGAIIASTRIRPPRSTIGPSQGVI 73 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 + A L S LA L + +TLL A W + R+S++ T + GG Sbjct: 74 SLIAAGPLVNSSPDRLASYALPSLIAIGITLLLCAACAWAITRFSTIDSPTAVMSTLAGG 133 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+AM ++++ GAD R V QYLRV V+ + + +++G + + ++ +V SI Sbjct: 134 ASAMSVLSEELGADFRYVTVAQYLRVFIVSFSLPFLIPLLVGGDVDVGSEPLVNLSSHSI 193 Query: 182 -NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 N L+ + + + G + LP+ +L P+ V+ Q I +P L A A++ IG Sbjct: 194 MNWLVVLAVITIPGWLASFTPLPAPRLLAPLAIAIVIGEWQPHLISIPGVLEAAAFVLIG 253 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 W+ G FD+Q L+ + LP L I L+ C MA LT YLAT+PGG Sbjct: 254 WQAGGAFDRQSLVTNAKRLPLAFLCIIVLMGGCGVMAGILTALGLGTLTETYLATTPGGR 313 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 V IA +A ++ MQ R+ +L+ + + I Sbjct: 314 YIVLAIAHDRDAGP-IVTVMQVTRMIVMLIVTAFVPQLIR 352 >UniRef50_A6CU26 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CU26_9BACI Length = 357 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 72/335 (21%), Positives = 151/335 (45%), Gaps = 4/335 (1%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAG-IIFSMRGITLQLPRSAFLAAQAILGCMIAQ 67 ++ + + F +H+P A LLG M A + M + P I+G I Q Sbjct: 8 TILIGSIGGMVFSLLHIPLAWLLGSMTAVFAVEKMTSFKVYWPPIFRNTGLIIVGYTIGQ 67 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 + + + P +L + ++ LL S+++ L+ + + + + G PGG + MV Sbjct: 68 SFSRDTAIEIVQQLPWMLFLTVLLLLFSSVLALLITKLTGVNLRSTITGCIPGGLSQMVV 127 Query: 128 MAQDY-GADIRLVAFMQYLRVLFVAGAAVL--VTRMMLGDNAEAVNQHIVWFPPVSINLL 184 + ++ D+ +V +Q +R++ V + + GD V+ +S+ LL Sbjct: 128 LGEELEDIDVTVVTIIQVIRLVSVIFIVPFMAFSPVFQGDKDGVVSAPAAVDFYLSLPLL 187 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 + +AV++ + L+LP+ T+L P+L +L + + +P+ + A + +G Sbjct: 188 ILSGMAVLSAVLAVKLKLPTPTLLGPILGIGILSASGIAAPHMPDAAIIAAQILLGIYFS 247 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 + + + L + L+A G+ L I F+T++L+ +PGG+ +A Sbjct: 248 KMMKFEDSGSLSKFIGLTLATSVILIAFTFGLGAILMASHDITFITSFLSMAPGGMAEMA 307 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 ++ +AD+++I R+ IL P I +++ Sbjct: 308 LVGQALHADLSIITGYHLFRILFILFAVPVILKWL 342 Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 1/157 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCMI 65 +L +++L ++ + + LP LLGP++ I S GI +P +A +AAQ +LG Sbjct: 187 LILSGMAVLSAVLAVKLKLPTPTLLGPILGIGILSASGIAAPHMPDAAIIAAQILLGIYF 246 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 ++ + +L+ + LA ++ + + +G +L+ + T +PGG A M Sbjct: 247 SKMMKFEDSGSLSKFIGLTLATSVILIAFTFGLGAILMASHDITFITSFLSMAPGGMAEM 306 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 + Q AD+ ++ R+LF+ A ++ + + Sbjct: 307 ALVGQALHADLSIITGYHLFRILFILFAVPVILKWLF 343 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 1/157 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 I +L TIL+ + G V LL +P +L M A ++ + P + +G Sbjct: 3 IKILYTILIGSIGGMVFSLLHIPLAWLLGSMTAVFAVEKMTSFKVYWPPIFRNTGLIIVG 62 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 + IG F + + ++ LP +L LL + +A +T+ ++ + PGGL Sbjct: 63 YTIGQSFSRDTAIEIVQQLPWMLFLTVLLLLFSSVLALLITKLTGVNLRSTITGCIPGGL 122 Query: 301 DTVAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIA 336 + V+ + D+ ++ +Q +RL S++ P +A Sbjct: 123 SQMVVLGEELEDIDVTVVTIIQVIRLVSVIFIVPFMA 159 >UniRef50_B5JCA9 Putative ammonia monooxygenase superfamily n=3 Tax=Rhodobacteraceae RepID=B5JCA9_9RHOB Length = 357 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 138/338 (40%), Gaps = 3/338 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 + G+ L++ ++ F P L GP++A +I ++ G+ L + + ILG Sbjct: 2 WRKQGLTVALAVAGTVIFWWADFPLPFLFGPLVACVIGALAGMPLVAAGNVSQWMRTILG 61 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I +LT +++ L V I L L + + G T + + PGG Sbjct: 62 VAIGASLTPQVISELPKMAASVALIPLFVLCIALLGVPFFRYVYRFDGVTAWYAAMPGGL 121 Query: 123 AAMVAMAQDYGADIRLVAFMQYLR-VLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 MV ++ G D+R ++ + R ++ + A +++T++ D + Q PP Sbjct: 122 QDMVMFGKEAGGDVRALSLIHATRLLIIITIAPIILTQVFDADIKNPIGQPASEIPPY-- 179 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 L++ L A++ V LR+ M+ PM+ L +I P + A IG Sbjct: 180 ELVIMALTAIIGWHVAKRLRIFGAPMIGPMILAGALSITGIINYRPPAEAILTAQFFIGI 239 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G G+ L R + + + L + T + + A+LA +P G Sbjct: 240 ALGAGYVGVTLADIRRDVAAGIFFVIILAILTFIFTEIATLIAAVPPVDAFLAFAPAGQA 299 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + V A AD+ ++ R+F +++ P AR Sbjct: 300 EMTVFAIIVGADLGYVVVHHLSRVFLVVIGAPVAARVF 337 Score = 58.0 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 1/169 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQA 59 +P + ++ + +++ + + A ++GPMI S+ GI + P A L AQ Sbjct: 176 IPPYELVIMALTAIIGWHVAKRLRIFGAPMIGPMILAGALSITGIINYRPPAEAILTAQF 235 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +G + G L + + + +++ + + I + +++P +P Sbjct: 236 FIGIALGAGYVGVTLADIRRDVAAGIFFVIILAILTFIFTEIATLIAAVPPVDAFLAFAP 295 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA 168 G A M A GAD+ V RV V A + R+ Sbjct: 296 AGQAEMTVFAIIVGADLGYVVVHHLSRVFLVVIGAPVAARVFGASPTNT 344 >UniRef50_D0DD06 Putative ammonia monooxygenase superfamily protein n=1 Tax=Citreicella sp. SE45 RepID=D0DD06_9RHOB Length = 354 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 84/343 (24%), Positives = 144/343 (41%), Gaps = 3/343 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 L V++ L + F V P ++GP+ IAG + + +T+ +P Q + + Sbjct: 8 LTLYVVAALAGVLFSRVGTPLPWMIGPLVIAGALSASGLVTVAVPIRTRPIGQVTIATFV 67 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 + T L +L P++L + L L+++ +V + R T +P Sbjct: 68 GAHFTPDALHSLLQTAPMLLTVSLFILVAAILVAQIQRRVYGTSTVTALLSVTPTSPVEA 127 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLL 185 +A+ G + V Q R+ V + ++ A V L + Sbjct: 128 GVLAEHMGVNPGPVVLAQTARIALVVTVVPFLLQLGA--PPGAAPLAPVLHHGSLPGLAV 185 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 T+ A++ + LLR + L P+ A+ S L + E+P LLA+A + +G +G Sbjct: 186 TLGGALLGPVLFRLLRFSNPFFLGPLFLAALFSSVGLPSYEIPGPLLAIAQIVLGTWLGS 245 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 F +++L + + +LLS LL C AWGL+ F T L +PGG+ +A+ Sbjct: 246 SFRRELLEQRGALIGSVLLSSSLLLGACVLGAWGLSALFGAPFPTVMLGIAPGGVTEMAL 305 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 A D+AL+ AM R+F I+ IAR R Sbjct: 306 TAGVLGQDVALVTAMHLTRIFVIMPNLGWIARVTHRLDGARRG 348 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 63/156 (40%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 LL ++A +AG + + P M+ P++ L + L+T+ +P + + I Sbjct: 6 PLLTLYVVAALAGVLFSRVGTPLPWMIGPLVIAGALSASGLVTVAVPIRTRPIGQVTIAT 65 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G F L L+ P +L +L +A R +TA L+ +P Sbjct: 66 FVGAHFTPDALHSLLQTAPMLLTVSLFILVAAILVAQIQRRVYGTSTVTALLSVTPTSPV 125 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 V+A + ++ QT R+ ++ P + + Sbjct: 126 EAGVLAEHMGVNPGPVVLAQTARIALVVTVVPFLLQ 161 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 59/167 (35%), Gaps = 1/167 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGCMI 65 + +LL + F + LGP+ +FS G+ ++P AQ +LG + Sbjct: 184 AVTLGGALLGPVLFRLLRFSNPFFLGPLFLAALFSSVGLPSYEIPGPLLAIAQIVLGTWL 243 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 + +L VL + L + + W L P T G +PGG M Sbjct: 244 GSSFRRELLEQRGALIGSVLLSSSLLLGACVLGAWGLSALFGAPFPTVMLGIAPGGVTEM 303 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH 172 A G D+ LV M R+ + + R+ + + Sbjct: 304 ALTAGVLGQDVALVTAMHLTRIFVIMPNLGWIARVTHRLDGARRGRP 350 >UniRef50_Q0FTZ5 Putative ammonia monooxygenase n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FTZ5_9RHOB Length = 348 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 1/333 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 M L F + +P + +LG M + S+ + ++ A A++G M+ Sbjct: 10 AMALSLGAAGGAVFTLIGMPLSWMLGAMTVTGVASVLKLPVRGWSKARPPMSAVIGTMLG 69 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 L + A WP +L + L+++ + L R +L T + + PGG MV Sbjct: 70 SQFGPHTLQSAAQWWPALLGLAGYLLVAATLSNIYLRRVVALDRPTAFFSAMPGGLIDMV 129 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT 186 M + G D R +A M R+ V + + ++ G + + ++I +L Sbjct: 130 LMGAEKGGDERTIALMHSSRIFLVVLSLPPLMTLITGADVGGQSAAWRPLANMAIGDVLW 189 Query: 187 ILLAVVAG-TVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 L A+ AG T G L RLP+ ++ PMLA + + +P ++A+A + +G +G Sbjct: 190 FLGALAAGATFGKLARLPAPFLIGPMLASMAVHWSGVSGFVVPSAVIAVAQVVLGTTVGC 249 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 F R L L + LL++ A+ L + + LA +PGGL +++ Sbjct: 250 RFAGISTQRILHILLTSAGATAILLSVAVVFAFALQFVLDVPIEGVLLAFAPGGLAEMSL 309 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 +A N +++ ++ R+ ++L F Sbjct: 310 VALALNLEVSFVVVSHICRIGMVILGAQLFLVF 342 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 64/167 (38%), Gaps = 1/167 (0%) Query: 175 WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 + + + L G V L+ +P ML M V +L + M Sbjct: 1 MSAGLRPTFAMALSLGAAGGAVFTLIGMPLSWMLGAMTVTGVASVLKLPVRGWSKARPPM 60 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 + IG +G F L A + P +L LL L R + +D TA+ + Sbjct: 61 S-AVIGTMLGSQFGPHTLQSAAQWWPALLGLAGYLLVAATLSNIYLRRVVALDRPTAFFS 119 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 PGGL + ++ A D I M + R+F ++L+ P + I+ Sbjct: 120 AMPGGLIDMVLMGAEKGGDERTIALMHSSRIFLVVLSLPPLMTLITG 166 >UniRef50_A3K1Y0 Putative ammonia monooxygenase n=3 Tax=Rhodobacteraceae RepID=A3K1Y0_9RHOB Length = 362 Score = 170 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 73/348 (20%), Positives = 143/348 (41%), Gaps = 8/348 (2%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-----LQLPRSAFLAA 57 VLQ M+ + + + VH P + G ++A + P + Sbjct: 11 VLQTAMMLAIGTIGGLLAYWVHWPMPWMFGGLLAAGVTVRLVQPKVISDYAFPMNFRTFF 70 Query: 58 QAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGS 117 A++G MI +T +L+ + A++ + + + R T + Sbjct: 71 VALIGVMIGTQVTPDLLSLAGELPITLSALVFFVVAAHLGNMTIFHRIGGYDKATALFSG 130 Query: 118 SPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWF- 176 +PGG + M + GAD R++ Q+LR++ V + + +G + + Sbjct: 131 TPGGLMESIFMGESAGADTRVLTVQQFLRIILVITLLPVGLSLWIGHPVGSAAGLTIGGD 190 Query: 177 --PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 P + L + + AV+ +G +RLP+ + P+L A ++ + LP WL+A Sbjct: 191 KPPVTPLALGMIAITAVLGLWIGRRIRLPAPQLTGPLLLAATATITGILDLHLPFWLIAT 250 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 A + IG +G+ F R L LS+ +L + A L I F+ +++ Sbjct: 251 AQLVIGVSLGMRFKGVDAGLLRRSLWLAALSVSYMLVLGMTFAIVLQHLTGIAFLHLFIS 310 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 +PGG+ ++V+A A+ AL+ +R+ ++ P A+ + Sbjct: 311 FAPGGVAEMSVVALSLAANPALVSLHHVVRILITVVEMPLAAKVMGLR 358 Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 63/162 (38%), Gaps = 1/162 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQA 59 + L GM+ + ++L + LPA L GP++ ++ G + L LP AQ Sbjct: 194 VTPLALGMIAITAVLGLWIGRRIRLPAPQLTGPLLLAATATITGILDLHLPFWLIATAQL 253 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G + G L + + + L+ +L + + +P Sbjct: 254 VIGVSLGMRFKGVDAGLLRRSLWLAALSVSYMLVLGMTFAIVLQHLTGIAFLHLFISFAP 313 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 GG A M +A A+ LV+ +R+L L ++M Sbjct: 314 GGVAEMSVVALSLAANPALVSLHHVVRILITVVEMPLAAKVM 355 >UniRef50_O07568 Uncharacterized protein yhjN n=6 Tax=Bacillus RepID=YHJN_BACSU Length = 384 Score = 170 bits (430), Expect = 8e-41, Method: Composition-based stats. Identities = 77/359 (21%), Positives = 152/359 (42%), Gaps = 22/359 (6%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM--------RGITLQLPRSAFLAAQAIL 61 +S + ++G +I +M + R Q IL Sbjct: 14 IAISAAGGFILSLTGISIGWMIGTLIVACCLAMIRPAWLMMAPDQKGINRRWLALGQMIL 73 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + Q L S+L+ L +W V +L++++L + + G++L R+S T G++PGG Sbjct: 74 GIELGQKLNLSVLSVLKDHWFSVGVMLILSILLAMLSGYVLWRFSKTDMMTSFVGTAPGG 133 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 +AM ++AQ+ GA+ +V+ +Q +RVL V + + ++ + + Sbjct: 134 LSAMPSIAQEVGANTAIVSLVQMMRVLLVVLSIPFLVILIYTKQDRTASAAAETISSATT 193 Query: 182 NL--------LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQ--LITIELPEWL 231 + ++ IL A A L+ P+ +L ML A++ G + ++ W Sbjct: 194 DFRLAPVLWTVILILAAWGACKAAKFLKFPAPWLLGSMLGVAIVHVGGAAVTGHDMTAWW 253 Query: 232 LAMA----YMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHID 287 L+ A + +G IG K + R + +S L+A A ++ I Sbjct: 254 LSQANHVSQVFLGATIGSKMYKSMFAGVTRIIIVGFVSSVGLIAAMFLSAVIVSELTGIS 313 Query: 288 FMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 +T+ LA +PGG+ +A + +AD ++A+Q +R+ ++ P R + ++ Sbjct: 314 LITSVLAFAPGGIAEMATTSVTLHADSTFVVAVQVIRVILVIALLPPFYRLLHHLHGEK 372 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 7/173 (4%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-------ITLQLPRSAF 54 PVL +L + + + PA LLG M+ I + G +T A Sbjct: 199 PVLWTVILILAAWGACKAAKFLKFPAPWLLGSMLGVAIVHVGGAAVTGHDMTAWWLSQAN 258 Query: 55 LAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGA 114 +Q LG I + S+ + + + + + + ++ + + T Sbjct: 259 HVSQVFLGATIGSKMYKSMFAGVTRIIIVGFVSSVGLIAAMFLSAVIVSELTGISLITSV 318 Query: 115 WGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAE 167 +PGG A M + AD V +Q +RV+ V R++ + E Sbjct: 319 LAFAPGGIAEMATTSVTLHADSTFVVAVQVIRVILVIALLPPFYRLLHHLHGE 371 >UniRef50_C2BYG7 Possible ammonia monooxygenase n=1 Tax=Listeria grayi DSM 20601 RepID=C2BYG7_LISGR Length = 365 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 81/343 (23%), Positives = 151/343 (44%), Gaps = 10/343 (2%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 + + L + + +HLP LLGPM I I+ I L P LAA I+G Sbjct: 17 LLTILAGLAGAGLAMLIHLPIPWLLGPMLIITILNQFDKIPLHFPAILRLAALMIVGYTA 76 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 +T + + PI++ +V +L + + + ++++L + GS PGGA M Sbjct: 77 GTKITLATFKLIISQLPIMVITTIVLILIGILFSYFISKWTTLDYQSLVAGSMPGGATQM 136 Query: 126 VAMAQDYGA-DIRLVAFMQYLRVLFVAGAAVLVTR---MMLGDNAEAVNQHIVWFPPV-- 179 + A++ D +V+ Q R++ + ++ + ++AV H Sbjct: 137 ILYAREQKHLDPTIVSIFQIFRLVTIFLFVPIILYTPLIGAHHQSQAVATHNAASDYFLS 196 Query: 180 ---SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 ++L ++ +V +G LRLP +L P+L +L + +P ++ Sbjct: 197 QFPWASILFFLIAVLVFSDLGRFLRLPIHQLLGPLLGIGILNIFGIHGFNVPHGIIGATQ 256 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 +A+G GLG + + ++S LL G++ L + H T YLA Sbjct: 257 LALGIYFGLGINLKGNANKATLFISAIISNIVLLFCMVGISLLLNQLFHYGETTTYLAIV 316 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 PGG+D +++IA +A++ L++ QT R S+ L P + + + Sbjct: 317 PGGMDQISLIATTISANVGLVVGYQTFRSISVNLIAPFVFKHL 359 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 1/158 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 LLTIL + + L+ LP +L PML +L I + P L A M +G Sbjct: 14 FPFLLTILAGLAGAGLAMLIHLPIPWLLGPMLIITILNQFDKIPLHFPAILRLAALMIVG 73 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 + G + LP ++++ L+ I ++ ++++ +D+ + + PGG Sbjct: 74 YTAGTKITLATFKLIISQLPIMVITTIVLILIGILFSYFISKWTTLDYQSLVAGSMPGGA 133 Query: 301 DTVAVIA-AGSNADMALIMAMQTLRLFSILLTGPAIAR 337 + + A + D ++ Q RL +I L P I Sbjct: 134 TQMILYAREQKHLDPTIVSIFQIFRLVTIFLFVPIILY 171 Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 58/164 (35%), Gaps = 1/164 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAI 60 P + L+ S + LP LLGP++ I ++ GI +P A Q Sbjct: 199 PWASILFFLIAVLVFSDLGRFLRLPIHQLLGPLLGIGILNIFGIHGFNVPHGIIGATQLA 258 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG + A + + +V L + LL + T PG Sbjct: 259 LGIYFGLGINLKGNANKATLFISAIISNIVLLFCMVGISLLLNQLFHYGETTTYLAIVPG 318 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGD 164 G + +A A++ LV Q R + V A V + +L + Sbjct: 319 GMDQISLIATTISANVGLVVGYQTFRSISVNLIAPFVFKHLLQE 362 >UniRef50_A4U1B8 Ammonia monooxygenase n=3 Tax=Magnetospirillum RepID=A4U1B8_9PROT Length = 346 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 136/345 (39%), Gaps = 1/345 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 M + + L F LP +LG M A II ++ G+ L +P AI Sbjct: 1 MTIRPVILALALGGTGGALFFMADLPLPWMLGAMSACIIAALSGLRLAMPTPLRAVMLAI 60 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG M+ + +L L+ + + +L++ +V R + T + ++PG Sbjct: 61 LGVMLGSAFSPDLLDQLSRWSLSLSVLFAGMILATLLVMAYFRRAGHMDLPTAYFAAAPG 120 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 G MV G D R +A + +LR+L + + R++ G + ++Q + +S Sbjct: 121 GVNEMVMTGGALGGDERTIALIHFLRILLIVFTIPIGFRLVTGIHGAPISQSMGSLLDLS 180 Query: 181 I-NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 + + + A G LLR P+ ++ PM A A+L L P L+ +A + Sbjct: 181 WLDGAVLLACAAGGAMAGRLLRFPAASLTGPMAASAILHVLGLTASHPPAELVILAQVVT 240 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G +G S L+ I AG+A L + F LA PGG Sbjct: 241 GAGLGCRMVGLKWRDLATAARIASGSTMILITISAGLAAILAWLAGLPFSMLLLAFVPGG 300 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 + + +IA D+A + LR+ ++ P R + Sbjct: 301 IAEMCLIALALGQDVAFVSTHHVLRVILVIACAPLAFRLFKPWFR 345 >UniRef50_Q7D1Z3 Putative uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D1Z3_AGRT5 Length = 348 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 143/329 (43%), Gaps = 3/329 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 + ++ + ++ +H+PA L GP +A I + G+ L +P A ++G + Sbjct: 11 ALTALVGSMGALLASLLHIPAPFLSGPALAVTITGLAGVKLGIPAFIRNACFVVVGISMG 70 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 ++T S++ + +L+ ++ + W+L T G+SPG + ++ Sbjct: 71 TSVTPSVIDAAKTWPLSFIVVLVAVVIMLYVAYWILHYGFGYDRTTAMLGASPGHLSYII 130 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT 186 ++ + +D+ V+ +Q +RVL + + L+ + + I P L LT Sbjct: 131 SLGAETKSDLATVSIVQSVRVLALTLSVPLIVEYF---DLVSTEPLITNPPMGFFTLALT 187 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 I +++ G + + P+ +L + L +P WL Y+ IG IG Sbjct: 188 IAASLLTGWLFLRWKFPAALLLGGVAISIGTHITGLTEGGVPSWLSLPVYVLIGCLIGTR 247 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 F L+ + + A++ I +AW ++R + +A +PGGL+T+A + Sbjct: 248 FSNVSLMEVRKGFLAGFVVTIAVMVIAGTIAWLISRVTGVPLNAVMIAYAPGGLETMAAM 307 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAI 335 A +AD A + + +RL + + P + Sbjct: 308 AVMMHADTAYVGSHHVIRLLFLSVLMPLV 336 Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 1/158 (0%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 LT L+ + + LL +P+ + P LA + + + +P ++ ++ +G Sbjct: 9 TFALTALVGSMGALLASLLHIPAPFLSGPALAVTITGLAG-VKLGIPAFIRNACFVVVGI 67 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G ++ A ++ + A++ + W L D TA L SPG L Sbjct: 68 SMGTSVTPSVIDAAKTWPLSFIVVLVAVVIMLYVAYWILHYGFGYDRTTAMLGASPGHLS 127 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + + A + +D+A + +Q++R+ ++ L+ P I + Sbjct: 128 YIISLGAETKSDLATVSIVQSVRVLALTLSVPLIVEYF 165 >UniRef50_Q5HNN7 Membrane protein, putative n=14 Tax=Staphylococcus RepID=Q5HNN7_STAEQ Length = 355 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 73/332 (21%), Positives = 144/332 (43%), Gaps = 9/332 (2%) Query: 23 VHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 +H+ + GP++A ++ + + ++ P +LG I T ++ ++ NW Sbjct: 25 LHVILPFMFGPILAALLCVKVLKLKIRWPFWLSQIGLILLGVQIGSTFTQQVIKDISKNW 84 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQD-YGADIRLVA 140 ++ + ++ +L + I+ + + + + T PG + M+ MA++ A+I +V+ Sbjct: 85 LTIVFVTILLILLALIIAFFFKKIAQVNLETAILSVIPGALSQMLVMAEENKKANILVVS 144 Query: 141 FMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS--INLLLTILLAVVAGTVG- 197 Q RV+FV L++ DN +N + P +S +N+ I+L + G + Sbjct: 145 LTQTSRVIFVVILVPLISYFF-QDNHHEMNHTTMEVPTLSQTLNIWQIIILFSMVGIIYI 203 Query: 198 --CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRA 255 + P+ +L P++ + +T L WLLA A + RIGL + Sbjct: 204 GMSKINFPTKQLLAPIIVLIIWNMTTHLTFSLDHWLLATAQLIYMIRIGLQIANLMSDLK 263 Query: 256 LRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMA 315 R I L+ M G+ + +L +PGG+ + ++A + AD+A Sbjct: 264 GRIAIAIAFQNIMLIVTTFIMIIGIHLITNESINELFLGAAPGGMSQIVLVAMATGADVA 323 Query: 316 LIMAMQTLRLFSILL-TGPAIARFISTYAPKR 346 +I + R+F IL P I FI+ + Sbjct: 324 MISSYHIFRIFFILFVIAPLIGYFINVKLNNK 355 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 1/143 (0%) Query: 198 CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALR 257 +L + M P+LA + + I P WL + + +G +IG F +Q++ + Sbjct: 23 KMLHVILPFMFGPILAALLCVKVLKLKIRWPFWLSQIGLILLGVQIGSTFTQQVIKDISK 82 Query: 258 PLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG-SNADMAL 316 I+ L+ + +A+ + ++ TA L+ PG L + V+A A++ + Sbjct: 83 NWLTIVFVTILLILLALIIAFFFKKIAQVNLETAILSVIPGALSQMLVMAEENKKANILV 142 Query: 317 IMAMQTLRLFSILLTGPAIARFI 339 + QT R+ +++ P I+ F Sbjct: 143 VSLTQTSRVIFVVILVPLISYFF 165 >UniRef50_A4EFY2 Putative ammonia monooxygenase n=3 Tax=Bacteria RepID=A4EFY2_9RHOB Length = 350 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 126/335 (37%), Gaps = 2/335 (0%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNL 69 + L + LP +LGPMIA +M P ++G M+ + Sbjct: 14 LAIGLAGGVMAYFAGLPLPWMLGPMIANTAAAMLRAPTVGPDQLRPFVIPVIGVMLGSGV 73 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T I L +L + + ++ I + R T + + PGG M+ + Sbjct: 74 TAEIFGLLGTWVLTLLLLPVFLACAAGISYAVYRRIGKYDPVTAFYSAMPGGLNEMLILG 133 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVN--QHIVWFPPVSINLLLTI 187 + G D R +A RVL + L ++LG ++ Q I + ++ + Sbjct: 134 GEAGGDERRIALAHAARVLIIIIFVALFFGLILGVSSGGRGTVQWIGLYEITMLDYAILG 193 Query: 188 LLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF 247 AV +G + LP+ + PM+ + +T+ P + A + IG IG F Sbjct: 194 FCAVAGALLGRWIGLPAAPVFGPMILSGIAHIAGWVTVAPPTIFVIAAQITIGTIIGTRF 253 Query: 248 DKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307 L + ++ +L G A + I A+LA SPGGL ++++ Sbjct: 254 IGATLAEIRTDIGLSAVASTLMLIAAVGFAELIVLISGIPLAQAFLAFSPGGLTEMSLLT 313 Query: 308 AGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 D+ + M +R+ ++ P + + I Sbjct: 314 LAMEQDVTYVSIMHIIRITLVIALAPFVFKLIRKR 348 Score = 73.8 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 1/162 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQA 59 + +L + +L ++ ++ + LPAA + GPMI I + G +T+ P +AAQ Sbjct: 184 ITMLDYAILGFCAVAGALLGRWIGLPAAPVFGPMILSGIAHIAGWVTVAPPTIFVIAAQI 243 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +G +I G+ L + + + + L+++ L+V S +P SP Sbjct: 244 TIGTIIGTRFIGATLAEIRTDIGLSAVASTLMLIAAVGFAELIVLISGIPLAQAFLAFSP 303 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 GG M + D+ V+ M +R+ V A V +++ Sbjct: 304 GGLTEMSLLTLAMEQDVTYVSIMHIIRITLVIALAPFVFKLI 345 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 1/163 (0%) Query: 177 PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 P + + + + G + LP ML PM+A + T+ P+ L Sbjct: 4 PKTLLPQFTALAIGLAGGVMAYFAGLPLPWMLGPMIANTAAAMLRAPTVG-PDQLRPFVI 62 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 IG +G G +I + +LL L R D +TA+ + Sbjct: 63 PVIGVMLGSGVTAEIFGLLGTWVLTLLLLPVFLACAAGISYAVYRRIGKYDPVTAFYSAM 122 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 PGGL+ + ++ + D I R+ I++ I Sbjct: 123 PGGLNEMLILGGEAGGDERRIALAHAARVLIIIIFVALFFGLI 165 >UniRef50_A8Z2I6 Possible ammonia monooxygenase n=51 Tax=Staphylococcus aureus RepID=A8Z2I6_STAAT Length = 357 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 147/347 (42%), Gaps = 7/347 (2%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAILGCMIA 66 ++ VLS +SI + H+ + GP+IA II + + ++ P +LG I Sbjct: 10 IVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIVLLGVQIG 69 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 T +++ + NW ++ + + LL + ++ ++ + + + T PG M+ Sbjct: 70 STFTKNVVMDIKNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIPGALTQML 129 Query: 127 AMAQ-DYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI---- 181 MA+ D A++ +V+ Q R++FV ++ N A + P + Sbjct: 130 VMAEQDKRANLLVVSLTQTSRIIFVVVLVPFISYFFHDGNMHANGKLTKVLPLSQVLNIG 189 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 +++ + + + ++ P+ +L P++ V +T L WLL MA + Sbjct: 190 QIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLLNMAQLIYMI 249 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 RIG+ + R I + L+ M + + F + +L +PGG++ Sbjct: 250 RIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLGAAPGGVN 309 Query: 302 TVAVIAAGSNADMALIMAMQ-TLRLFSILLTGPAIARFISTYAPKRS 347 + ++A + AD+A+I + F + + P I F+ + KR Sbjct: 310 QIVLVALATGADVAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRE 356 Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 1/158 (0%) Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 + +L+ + + M P++A + + I+ P L + + +G +I Sbjct: 9 FIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIVLLGVQI 68 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G F K +++ I++ ++L I MA+ + I+ TA L+ PG L + Sbjct: 69 GSTFTKNVVMDIKNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIPGALTQM 128 Query: 304 AVIAAG-SNADMALIMAMQTLRLFSILLTGPAIARFIS 340 V+A A++ ++ QT R+ +++ P I+ F Sbjct: 129 LVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFISYFFH 166 >UniRef50_A3VKP5 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VKP5_9RHOB Length = 355 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 139/323 (43%), Gaps = 6/323 (1%) Query: 21 LAVHLPAALLLGPMIAGIIFSMRGIT-----LQLPRSAFLAAQAILGCMIAQNLTGSILT 75 + P +LG +I +M P ++G MI ++ +LT Sbjct: 27 QWIGTPLPFMLGSLIMAAAGAMAFGDRFPQGYSYPLPFRQLFVGVIGVMIGAQVSPDLLT 86 Query: 76 TLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGAD 135 + AILL +L+ + + + L T + SPGG +A +D GAD Sbjct: 87 LAPKLLVSIPAILLFVVLAHSANYLIFRKVGKLDRATAYYSGSPGGLLESIAFGEDAGAD 146 Query: 136 IRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ-HIVWFPPVSINLLLTILLAVVAG 194 IR++ +Q+LR++ V + G+ + P + ++++L +L +V Sbjct: 147 IRVLTILQFLRIIVVVAVLPFAISIYEGEPVGSAAGLTTSADPAIWLDVVLVMLFSVAGV 206 Query: 195 TVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 +G ++LP+ + P+ V + ++ + +P WL+A A + +G +GL F Sbjct: 207 WLGGKVKLPASQLAGPLFLVGVATATGIVDLNIPGWLVASAQVVVGISLGLRFVGITRRM 266 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 + L LLS ++L I A ++ + R T ++ +PGG+ +++IA A+ Sbjct: 267 MISGLGLSLLSGASMLGIGAILSLIVARLTDFSLETLIISFAPGGVTEMSLIALSLAANP 326 Query: 315 ALIMAMQTLRLFSILLTGPAIAR 337 + +R+ + ++ + + Sbjct: 327 TFVTLHHLVRIVATVVELAVVRK 349 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 1/160 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAIL 61 L ++ + S+ V LPA+ L GP+ + + G + L +P +AQ ++ Sbjct: 192 WLDVVLVMLFSVAGVWLGGKVKLPASQLAGPLFLVGVATATGIVDLNIPGWLVASAQVVV 251 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + G + + L L AI+ ++ R + T +PGG Sbjct: 252 GISLGLRFVGITRRMMISGLGLSLLSGASMLGIGAILSLIVARLTDFSLETLIISFAPGG 311 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 M +A A+ V +R++ +V +M Sbjct: 312 VTEMSLIALSLAANPTFVTLHHLVRIVATVVELAVVRKMN 351 >UniRef50_B1HT63 Protein abrB (AidB regulator) n=2 Tax=Bacillaceae RepID=B1HT63_LYSSC Length = 314 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 73/308 (23%), Positives = 138/308 (44%), Gaps = 9/308 (2%) Query: 27 AALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVL 85 LLG + A +I + + L+ S + G I T + + + ++ Sbjct: 1 MPWLLGAITAVLIVQLSTNVQLRWHSSFRNFGLIVAGYSIGFAFTPEAVQDIKLFLGSIV 60 Query: 86 AILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGA-DIRLVAFMQY 144 I ++ +L V +L+ + + L T PGG A +VA A++ G D+ ++ F Q Sbjct: 61 VINVIFILLFFGVSYLVAKRTDLDFATALTCCVPGGMAQVVAFAEEQGDMDMVVITFFQI 120 Query: 145 LRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPS 204 LRVL + G L+ + G + + L+ +++ +AG + L++P+ Sbjct: 121 LRVLLIVGFVPLMLTDVGG-------NSTMSNGMYTWGLVGILIVCGLAGWIAQKLKIPT 173 Query: 205 GTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILL 264 G ML P+ + + +P LL +A + +G IGL K+ L + R + + Sbjct: 174 GYMLGPVFLLMGINMVGIEVPRIPVSLLHIAQLMVGIHIGLLLKKEDLHLSKRHIFYAFV 233 Query: 265 SIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLR 324 S + G+ + + +DF T +L+ PGGLD + +IAA +A++ ++ A Q R Sbjct: 234 SAGIYIGAAYGLTFLMKSLYSLDFRTGFLSIVPGGLDQMGIIAASVHANVTIVTAFQLFR 293 Query: 325 LFSILLTG 332 + I + Sbjct: 294 ILVISIFL 301 Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 2/149 (1%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGCMI 65 G+L V L I + +P +LGP+ + +M GI + ++P S AQ ++G I Sbjct: 154 GILIVCGLAGWIA-QKLKIPTGYMLGPVFLLMGINMVGIEVPRIPVSLLHIAQLMVGIHI 212 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 L L + + + ++ + +L+ SL TG PGG M Sbjct: 213 GLLLKKEDLHLSKRHIFYAFVSAGIYIGAAYGLTFLMKSLYSLDFRTGFLSIVPGGLDQM 272 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAA 154 +A A++ +V Q R+L ++ Sbjct: 273 GIIAASVHANVTIVTAFQLFRILVISIFL 301 >UniRef50_A0NRD3 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRD3_9RHOB Length = 349 Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 136/341 (39%), Gaps = 3/341 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 + + +++ F + LPAA L G M+ I ++ + +P A ++G Sbjct: 12 RLAVTLLIATAGGALFNLLGLPAAWLSGAMVFVAIATLAQVPTLMPALLRDALFIMIGIS 71 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + + I+ +A + +L V + + +L + T +GS PG + Sbjct: 72 MGAGVHPDIVERVAEWPVSMAMLLAVMVAVTFAGYAVLHYGAKWSKETAFFGSIPGALSY 131 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 ++A+A + GAD+ +A Q LR+ + + + + L Sbjct: 132 VMALATERGADLPRIASSQSLRLFVLVAVLPFAV---VSSAEPTGIGGSTVYVSGLKDFL 188 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 + I L + A + R+P G + A L + L+ + LP +++ ++ +G IG Sbjct: 189 IGIPLCLAASWLAVKTRVPGGGLTGAFFMSAGLNASGLLVLVLPNYIVLPCFVMMGAHIG 248 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 F L + + L + + A AW + + I F A LA +PGGL+ + Sbjct: 249 CRFGNMTLRQFVSVLGASIAAFAAAFLTSLAGAWMVAEMVDIPFGQALLAYAPGGLEVMT 308 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 ++A + D A + A Q R ++L P I + Sbjct: 309 LLAFMLDLDPAFVAAHQIARFTGMVLLLPFITGLVLGRRSN 349 Score = 64.2 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 1/165 (0%) Query: 172 HIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 + F + L +T+L+A G + LL LP+ + M+ A+ Q+ T+ +P L Sbjct: 2 PDISFQSAAGRLAVTLLIATAGGALFNLLGLPAAWLSGAMVFVAIATLAQVPTL-MPALL 60 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 ++ IG +G G I+ R + + + ++A+ L TA Sbjct: 61 RDALFIMIGISMGAGVHPDIVERVAEWPVSMAMLLAVMVAVTFAGYAVLHYGAKWSKETA 120 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 + + PG L V +A AD+ I + Q+LRLF ++ P Sbjct: 121 FFGSIPGALSYVMALATERGADLPRIASSQSLRLFVLVAVLPFAV 165 >UniRef50_A6TSB9 Putative ammonia monooxygenase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TSB9_ALKMQ Length = 346 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 142/341 (41%), Gaps = 8/341 (2%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCM 64 + ++ + L + + PA LLGPMI I S+ G LP+ + Q I+G Sbjct: 3 YLLIVSIGLFGWLVMRKIKAPAPALLGPMIFVGIASIGGFNFPHLPQVSVSIFQLIIGIF 62 Query: 65 IAQNLTGSILTTLAVN--WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + +T L + IL+ T+ SS + +L+ + L T +PGG Sbjct: 63 VGMRITRGQFQLLKRRTVLYSFILILIWTVGSSLVAANVLLTLTDLDVATALLAGTPGGL 122 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 M +A YGAD+ VA +Q LR+ F+ ++ + N + + Sbjct: 123 TEMSVVAFAYGADVPTVALLQLLRLTFIVSFIPFLSLSIKKKNGGYTEKIKDKKDVIEEV 182 Query: 183 L-----LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 + + I ++ G + L P+G ++ ++ + LP+ + +A + Sbjct: 183 VKRKVSVEIIGTGLIVGVLLMYLNFPAGGLIGAIIGVGGSSIILNKSAYLPKSVQLIAQI 242 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 IG IGL F ++ + R + +++ ++ +A + D T L ++P Sbjct: 243 GIGISIGLRFTQETFQQFSRLIGPMIILPLFMVLSGVLLAIIIKNITKWDLSTCLLCSAP 302 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 GL + ++A +D+ L+ QT RL +I L P I + Sbjct: 303 AGLSQMIIVAEEIESDVFLVSLFQTTRLLAIYLILPQIFNW 343 Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 2/161 (1%) Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 LL + + + V ++ P+ +L PM+ + G LP+ +++ + IG + Sbjct: 4 LLIVSIGLFGWLVMRKIKAPAPALLGPMIFVGIASIGGFNFPHLPQVSVSIFQLIIGIFV 63 Query: 244 GLGFDKQILLRALR--PLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 G+ + R L +L + + A L +D TA LA +PGGL Sbjct: 64 GMRITRGQFQLLKRRTVLYSFILILIWTVGSSLVAANVLLTLTDLDVATALLAGTPGGLT 123 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 ++V+A AD+ + +Q LRL I+ P ++ I Sbjct: 124 EMSVVAFAYGADVPTVALLQLLRLTFIVSFIPFLSLSIKKK 164 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 1/155 (0%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCMIAQ 67 + L++ + + ++ PA L+G +I S+ + LP+S L AQ +G I Sbjct: 191 IIGTGLIVGVLLMYLNFPAGGLIGAIIGVGGSSIILNKSAYLPKSVQLIAQIGIGISIGL 250 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 T + ++ + L +LS ++ ++ + +T S+P G + M+ Sbjct: 251 RFTQETFQQFSRLIGPMIILPLFMVLSGVLLAIIIKNITKWDLSTCLLCSAPAGLSQMII 310 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 +A++ +D+ LV+ Q R+L + + L Sbjct: 311 VAEEIESDVFLVSLFQTTRLLAIYLILPQIFNWYL 345 >UniRef50_B3QBE9 Membrane protein AbrB duplication n=9 Tax=Bradyrhizobiaceae RepID=B3QBE9_RHOPT Length = 350 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 71/338 (21%), Positives = 125/338 (36%), Gaps = 2/338 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 LQ + F LP L+ G MIA + G + LP LG Sbjct: 8 LQVIETIAIGSAGGALFYWAQLPGGLITGAMIAVGAAGLAGRKMGLPPPLSHIVLMALGV 67 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + ++ +++ LA + + + T ++ L R + SPG + Sbjct: 68 SLGSVVSPTMVHNLASYPVTIGLLAVATFCATFGSSIYLQRVHGWDRTSALLAGSPGALS 127 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 ++ +A + AD+ +A +Q +RV+ + A ++ ++ A+ P+ L Sbjct: 128 QIIMLATERKADVPGIAVVQVMRVIILTSAVPMLLALIGMAGHGALPSRGPEATPLV--L 185 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 + I +AV + L+ P+ M ML +VL G + LP+W A + IG I Sbjct: 186 AVLIAVAVGVALLLRLVNFPASWMFGAMLGSSVLHGGGWVEGTLPQWAYLAALVGIGTLI 245 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G F L + L S +AI A + + +A SPG +D + Sbjct: 246 GARFGAIKPRTILSYIGAALGSFAVAIAISAVFVIAIMLTTPVKLNDLVVAFSPGAMDAM 305 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 +A + D + A R + + P I Sbjct: 306 MALALTLHIDPVFVGAHHLSRFIYVSIVTPGIVHLFGH 343 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 1/165 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAI 60 L +L +++ +++ V+ PA+ + G M+ + G + LP+ A+LAA Sbjct: 181 TPLVLAVLIAVAVGVALLLRLVNFPASWMFGAMLGSSVLHGGGWVEGTLPQWAYLAALVG 240 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G +I T+ L V + SA+ ++ + + N SPG Sbjct: 241 IGTLIGARFGAIKPRTILSYIGAALGSFAVAIAISAVFVIAIMLTTPVKLNDLVVAFSPG 300 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN 165 AM+A+A D V R ++V+ + + Sbjct: 301 AMDAMMALALTLHIDPVFVGAHHLSRFIYVSIVTPGIVHLFGHSP 345 >UniRef50_D0L4U6 Membrane protein AbrB duplication n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L4U6_GORB4 Length = 375 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 104/360 (28%), Positives = 168/360 (46%), Gaps = 14/360 (3%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ------------ 48 +PV +W +L +L+ + + + AA L ++ + ++ GI+ + Sbjct: 10 VPVRRWILLALLTGAATYLLELLDVDAAPLFAGLVIAGVLAIAGISPRPPGAISDDPDAP 69 Query: 49 -LPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSS 107 +PR LAAQ +LG I L+ L W VL I + TL S G LL + Sbjct: 70 VIPRGYVLAAQGVLGVYIGTIADSDTLSGLGSAWFPVLVIGVATLGLSVAGGALLGLHKQ 129 Query: 108 LPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAE 167 + TG+ GGA+ +V + ++ G D R+VA +QYLRV V + L ++ G ++ Sbjct: 130 VDPLTGSLALVAGGASGLVVVTRELGGDERMVAVIQYLRVALVTLSIPLFASLVFGQSSA 189 Query: 168 AVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT-IE 226 AV + + L+L + V VG LL +P+G +L+PM V + + E Sbjct: 190 AVTETTPSWADQGWGLVLMAVCMGVGIPVGRLLHVPAGALLVPMALATVAELTGIAGDAE 249 Query: 227 LPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHI 286 + LL + Y IGW+ GLGF L R LP L+ I A+ CA + L+ + Sbjct: 250 VSPILLTLGYAVIGWQAGLGFTLPRLRAIGRVLPFALVLILAIGVGCALLGVALSAWTGE 309 Query: 287 DFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 YLAT+PGG+ V A + ++A ++A Q LR+ +L P AR + + + Sbjct: 310 SMYDCYLATTPGGIYAVLAAATAAGGNVAFVVAAQILRVLLMLFVAPFAARVAARHLRRP 369 >UniRef50_A3JPA2 Putative ammonia monooxygenase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JPA2_9RHOB Length = 350 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 145/336 (43%), Gaps = 6/336 (1%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAG-----IIFSMRGITLQLPRSAFLAAQAILGC 63 L + + +I + LP ++G +I+ I + I+G Sbjct: 12 LFIAAFFGAILAYKIGLPMPFMMGSLISTATIITIFPKIFPDKYAFAPRLRTVVLTIIGV 71 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I +T I+T +L ++L ++ + +L R + P + +PGG Sbjct: 72 AIGSQITPEIVTRAPEIAISLLGVVLFVPIAHFVNYMILRRLAGYPRYDALFAGAPGGFI 131 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI-N 182 + +A++YGAD++ V +LRV+FV L+ + LG+ + V Sbjct: 132 ESITLAEEYGADVKRVGIQHFLRVVFVIFLVPLILTLYLGNPVGVARADVFVIDMVPPVQ 191 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 + L +A+ + L++P+G ++ P++ A++ ++++P W++A + +G Sbjct: 192 IALIANVALFGFLIARALKIPAGMLIGPLIIAAIISGFNGPSLDVPTWVVAFGQIIVGTS 251 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G+ F L+ L+++ A L + A + L F T ++ +PGGL Sbjct: 252 LGIRFQGLKGKLLLKSAWWCLVTVSATLVLSATFSQILYGIGGQSFETLLISFAPGGLTE 311 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 + +IA +A+ A+++ +R+ ++ RF Sbjct: 312 MGLIALSLSANSAVVVFHHLVRIIMTVMQLTLFIRF 347 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 1/161 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQA 59 +P +Q ++ ++L + A+ +PA +L+GP+ IA II G +L +P Q Sbjct: 187 VPPVQIALIANVALFGFLIARALKIPAGMLIGPLIIAAIISGFNGPSLDVPTWVVAFGQI 246 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 I+G + G L + L + TL+ SA +L T +P Sbjct: 247 IVGTSLGIRFQGLKGKLLLKSAWWCLVTVSATLVLSATFSQILYGIGGQSFETLLISFAP 306 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRM 160 GG M +A A+ +V F +R++ L R Sbjct: 307 GGLTEMGLIALSLSANSAVVVFHHLVRIIMTVMQLTLFIRF 347 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 49/157 (31%), Gaps = 4/157 (2%) Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGA----VLQSGQLITIELPEWLLAMAYMAI 239 + A + + LP M+ +++ A + L + I Sbjct: 10 FGLFIAAFFGAILAYKIGLPMPFMMGSLISTATIITIFPKIFPDKYAFAPRLRTVVLTII 69 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G IG +I+ RA +L + + L R A A +PGG Sbjct: 70 GVAIGSQITPEIVTRAPEIAISLLGVVLFVPIAHFVNYMILRRLAGYPRYDALFAGAPGG 129 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 +A AD+ + LR+ ++ P I Sbjct: 130 FIESITLAEEYGADVKRVGIQHFLRVVFVIFLVPLIL 166 >UniRef50_A3TX86 Putative uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TX86_9RHOB Length = 366 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 137/343 (39%), Gaps = 14/343 (4%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-------------MRGITLQLPRSAFL 55 L + L + A+ +P +LG ++ I + + + Sbjct: 18 LIAIGALGGLAAQALGMPLPFILGSLLLVAIVAQGSALLAASPDRALLPPDFKFNDEFRA 77 Query: 56 AAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAW 115 ++G I +T +L L A+ L L+ + + R T + Sbjct: 78 IFIGVIGMAIGTRITIEVLQNLPKAAFSFAALTLFVPLTFWVNYLIFRRIGRYDHATALF 137 Query: 116 GSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW 175 +SPGG + + GAD+R + Q+LR++FV + + +G + + Sbjct: 138 SASPGGLYESIMYGEQAGADMRQLMLAQFLRIIFVVTLLPVGMSLYIGHPVGSAAGLGLA 197 Query: 176 FPPVSI-NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 + +L + L+ V+ +G L LP+ +L P+L GAV+ ++LP W+L++ Sbjct: 198 PADTGLEHLPVAALVLVLGLVLGHRLHLPAAQLLGPLLLGAVVTLSGFAVLDLPNWMLSV 257 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 + + IG +G F + +LS+ A++ I MA L F ++ Sbjct: 258 SQIVIGTTLGTRFVGIRPRMMINGAGLGILSVAAMMLIGTAMALVLRPLTGEHFDVLLIS 317 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 +PGG+ +A++A NA+ A + R+ + AR Sbjct: 318 FAPGGVTEMALVALSLNANPAFVTLHHLYRIILTVFVIGHAAR 360 Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 12/163 (7%) Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELP------------EWL 231 L I + + G L +P +L +L A++ G + P + Sbjct: 16 LGLIAIGALGGLAAQALGMPLPFILGSLLLVAIVAQGSALLAASPDRALLPPDFKFNDEF 75 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 A+ IG IG ++L + + R D TA Sbjct: 76 RAIFIGVIGMAIGTRITIEVLQNLPKAAFSFAALTLFVPLTFWVNYLIFRRIGRYDHATA 135 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPA 334 + SPGGL + + ADM +M Q LR+ ++ P Sbjct: 136 LFSASPGGLYESIMYGEQAGADMRQLMLAQFLRIIFVVTLLPV 178 >UniRef50_C0VV00 Ammonia monooxygenase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VV00_9CORY Length = 354 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 93/343 (27%), Positives = 165/343 (48%), Gaps = 5/343 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILG 62 ++W ++ LS+LL +PAA ++GP++ ++ L L R F ++ +G Sbjct: 8 VRWLVVAPLSVLLGYVLSRASVPAAWIIGPLVVSAACALLTKKELPLNRYLFRFSRGTIG 67 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVR-YSSLPGNTGAWGSSPGG 121 + A L L T+L + I G ++ + + + +G GG Sbjct: 68 ILAALPLVTVGWREFVTYLLPGLFTATFTILLAIIGGTIMGKTHKQIGLESGIMSMLAGG 127 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+ M +A++ GAD R VA QYLR+L V+ + LV ++ + P + Sbjct: 128 ASVMPIIAKEVGADYRYVALNQYLRLLTVSVSLPLVAGWLMTTESAPAGHPAPPEPAGWV 187 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIEL--PEWLLAMAYMAI 239 L + I +A+ A +V L +PS +++ P+L ++ S ++ L PE + +A++ + Sbjct: 188 GLAIIIAVAMGAESVARFLHIPSPSIIGPILVMIIVASAIPDSVSLYPPEVMRIIAFLVV 247 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 GW G L LP L + L+ CA +AW LT ++ I + AYLAT+PG Sbjct: 248 GWMCGGSLSLTSLKTFSALLPITLTFVGVLIGACALIAWPLTEWLDITYFEAYLATTPGA 307 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 LDTV + + S + A+++ MQ +RL I++ + +F+ Y Sbjct: 308 LDTVLALTSESGSG-AVVVTMQVIRLLCIVVFAGYLPQFLRLY 349 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 75/162 (46%), Gaps = 4/162 (2%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR---GITLQLPRSAFLAAQA 59 + ++ +++ +H+P+ ++GP++ II + ++L P + A Sbjct: 186 WVGLAIIIAVAMGAESVARFLHIPSPSIIGPILVMIIVASAIPDSVSLYPPEVMRIIAFL 245 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G M +L+ + L T + PI L + V + + A++ W L + + ++P Sbjct: 246 VVGWMCGGSLSLTSLKTFSALLPITLTFVGVLIGACALIAWPLTEWLDITYFEAYLATTP 305 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 G ++A+ + G+ +V MQ +R+L + A + + + Sbjct: 306 GALDTVLALTSESGS-GAVVVTMQVIRLLCIVVFAGYLPQFL 346 >UniRef50_D0S7S8 Putative uncharacterized protein n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S7S8_ACICA Length = 352 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 121/298 (40%), Gaps = 1/298 (0%) Query: 40 FSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVG 99 F G L Q I+G + T +++ +A W +L L +L+ ++ Sbjct: 45 FGSVGHPLACDPHWRRIGQVIIGMALGLYFTPALVQAVAAYWGFILIGLAWSLVLGTLLA 104 Query: 100 WLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTR 159 L R ++L T + S+ G A+ MV +A+ Y A + V LR++ + + Sbjct: 105 GLQYRVNALDWATAWFSSAIGSASEMVNIAERYQAQVEKVVAAHSLRIVVLVVLVPIFME 164 Query: 160 MMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQS 219 + + V ++L LA+ G V L + +L P+ +L Sbjct: 165 LYFQVEWTGLKIP-VSDQFSFFQVVLLFGLALFVGKVFQFFNLLNAWILGPLAIIGLLSF 223 Query: 220 GQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWG 279 ++ ++LPEW A + IGW +G F L + + + L+ L + A Sbjct: 224 CGILQMKLPEWFTAFGQVCIGWSLGSKFPFSFLKKNKKFIGITLIFNLLALVLSISFALL 283 Query: 280 LTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 L H + L SPGG+ ++++A + +++A Q RL ++LT + Sbjct: 284 LVNLSHTEKQILILGLSPGGIAEMSLMAKALGLAVPIVVAFQLSRLIFVILTTRFFYQ 341 Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 1/157 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILG 62 Q +L L+L + F +L A +LGP+ + S G + ++LP Q +G Sbjct: 185 FQVVLLFGLALFVGKVFQFFNLLNAWILGPLAIIGLLSFCGILQMKLPEWFTAFGQVCIG 244 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + S L I L L+ L+ S LLV S G SPGG Sbjct: 245 WSLGSKFPFSFLKKNKKFIGITLIFNLLALVLSISFALLLVNLSHTEKQILILGLSPGGI 304 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTR 159 A M MA+ G + +V Q R++FV + Sbjct: 305 AEMSLMAKALGLAVPIVVAFQLSRLIFVILTTRFFYQ 341 Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 1/150 (0%) Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 + +A+V + L +P +L P+L + S P W + + IG +GL Sbjct: 14 GLAIALVGALIAKYLYIPLPWLLGPLLTALLFGSVGHPLACDPHW-RRIGQVIIGMALGL 72 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 F ++ IL+ + L + +A R +D+ TA+ +++ G + Sbjct: 73 YFTPALVQAVAAYWGFILIGLAWSLVLGTLLAGLQYRVNALDWATAWFSSAIGSASEMVN 132 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAI 335 IA A + ++A +LR+ +++ P Sbjct: 133 IAERYQAQVEKVVAAHSLRIVVLVVLVPIF 162 >UniRef50_C6JLU4 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JLU4_FUSVA Length = 357 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 73/357 (20%), Positives = 148/357 (41%), Gaps = 19/357 (5%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 + + + + L+ + L +PA ++G + A IFS+ LP+S + AQ G Sbjct: 1 MWFFITFFVGLIGAGIALKYKVPAGAMIGSLFAVAIFSVVTGKAYLPQSYKIIAQISTGA 60 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I + + + L + ++++ L + ++G+ L S + T + ++PGG Sbjct: 61 FIGARIKYNDIIELKKVFKPAAIMVILMALINFVMGYFLYSSSDIDMKTALFCTAPGGIM 120 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM---------------LGDNAEA 168 M +A D+GAD VA MQ +R++ V + + + L + E Sbjct: 121 DMTLIAYDFGADTSKVAVMQMMRLISVMCLIPWLIKGVIKYYKSKSPAEETENLKSSKET 180 Query: 169 VNQHIVWFPPVSINL---LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITI 225 +++ P +L ++T+ + V++G G + +P+G M + M A Sbjct: 181 ISEKKKEKIPFMEDLKKIIITMTIGVISGFAGYYVGIPAGAMSVSMAGVAAYNIKSNKAF 240 Query: 226 ELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMH 285 +P L + G IG +L +++ I + + + + Sbjct: 241 -MPIKLRQFIQVLGGALIGAKMTMGDILGMKTIAIPVIIVISGFCLMNLILGIMVYKISD 299 Query: 286 IDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 + T+ + +PGG+ +A+IA AD + MQ +RL ++ P + + I Y Sbjct: 300 FNIPTSMFSAAPGGISDIAIIAGELGADTPKVAVMQFIRLVCVIAFYPILIKIIVQY 356 Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 1/167 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 + +T + ++ + ++P+G M+ + A A+ LP+ +A ++ G Sbjct: 1 MWFFITFFVGLIGAGIALKYKVPAGAMIGSLFAVAIFSVVTGKAY-LPQSYKIIAQISTG 59 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 IG ++ + + + + I M + L ID TA T+PGG+ Sbjct: 60 AFIGARIKYNDIIELKKVFKPAAIMVILMALINFVMGYFLYSSSDIDMKTALFCTAPGGI 119 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 + +IA AD + + MQ +RL S++ P + + + Y +S Sbjct: 120 MDMTLIAYDFGADTSKVAVMQMMRLISVMCLIPWLIKGVIKYYKSKS 166 >UniRef50_Q0S615 Possible ammonia monooxygenase n=2 Tax=Rhodococcus RepID=Q0S615_RHOSR Length = 369 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 103/347 (29%), Positives = 162/347 (46%), Gaps = 4/347 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILG 62 L+W L LS+ + +V L AA L +I ++ G ++PR AQ +L Sbjct: 20 LRWAALIALSVGGWVLGESVGLTAAGLFSALIVAATLAVTGWGPARVPRPLGKLAQGVLA 79 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + + + L W V++I TL S G LL + + TG+ + GGA Sbjct: 80 SAVGLMVHRDTIAGLGSMWMPVVSIAAATLALSVAAGALLALHRDVDAVTGSLAMTAGGA 139 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML--GDNAEAVNQHIVWFPPVS 180 +VAMA++ G D R+VA +QYLRV V + ++ AE V Sbjct: 140 TGLVAMARELGGDDRVVAVVQYLRVALVVVSMPMIVTFGFRADTGAETVTGTEGGGSEWY 199 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT-IELPEWLLAMAYMAI 239 + L L V V L+RLP+ L P+ A + G + +P L+ A + I Sbjct: 200 VALPFLALFIVGGTAVASLVRLPAPATLGPLAVSAGFELGGWSDAVAVPPMLMTGALILI 259 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 GW+ GL FD+ L R LP L + A CAG+ L+ + + AYLAT+PGG Sbjct: 260 GWQAGLAFDRASLRAIGRILPYAALLTLLVGAACAGLGVLLSHLTGVSLLEAYLATTPGG 319 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 L V ++A + +++ + A Q LRL +L+T P +A+ + ++ +R Sbjct: 320 LAAVLAVSASTASNVTFVAAAQVLRLVIMLVTTPIMAKAFAHFSSRR 366 Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 62/171 (36%) Query: 168 AVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIEL 227 +V + I L+V +G + L + + ++ A L + Sbjct: 7 SVPTRAAALRRHGLRWAALIALSVGGWVLGESVGLTAAGLFSALIVAATLAVTGWGPARV 66 Query: 228 PEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHID 287 P L +A + +GL + + ++ A LA+ L +D Sbjct: 67 PRPLGKLAQGVLASAVGLMVHRDTIAGLGSMWMPVVSIAAATLALSVAAGALLALHRDVD 126 Query: 288 FMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 +T LA + GG + +A D ++ +Q LR+ ++++ P I F Sbjct: 127 AVTGSLAMTAGGATGLVAMARELGGDDRVVAVVQYLRVALVVVSMPMIVTF 177 >UniRef50_B6AYQ5 Putative ammonia monooxygenase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AYQ5_9RHOB Length = 354 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 75/331 (22%), Positives = 142/331 (42%), Gaps = 5/331 (1%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIF-----SMRGITLQLPRSAFLAAQAIL 61 + L L F +P +LG M A + S + P A + Sbjct: 9 ALFLALGALGGWIFAFFPVPLPYMLGSMAASALAVAFLPSSITQDSKPPVHLRTPFIASI 68 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G +I + LT+ I L + L T L+ + + R+ T + ++PGG Sbjct: 69 GLLIGAQVHLETLTSWQPIAIIALMVTLFTPLAHWLNYRFMQRFGGYDVPTAFFCAAPGG 128 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 + + + GA++ ++ Q+LR++ V L+ + +G + + S Sbjct: 129 LIEAMTLGERAGANVAILTVQQFLRIVLVVTLIPLLMSIWVGHPVGSAAGLSQFSQAASS 188 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 L + + V +G +LR+P+G ++ PM+ +L S + + LP WL+ +A + IG Sbjct: 189 PLWQIVTVGAVGYALGLMLRIPAGQLMGPMIFAGLLTSTGWLPLTLPNWLIILAQIVIGT 248 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +GL F+ R L L S +LA+ A +A +T + A+L+ +PGG++ Sbjct: 249 TLGLRFNGLSGAIVRRGLILALGSAAVMLALGAVLALLITSLADVSLSAAWLSLAPGGVN 308 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTG 332 ++++A AD AL+ R+ ++ Sbjct: 309 EMSLVALSIAADPALVTLAHVYRIALTVMIM 339 Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 58/166 (34%), Gaps = 4/166 (2%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAV----LQSGQLITIELPEWLLAMAY 236 I L + L + G + +P ML M A A+ L S + P L Sbjct: 6 ITSALFLALGALGGWIFAFFPVPLPYMLGSMAASALAVAFLPSSITQDSKPPVHLRTPFI 65 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 +IG IG + L L+ + RF D TA+ + Sbjct: 66 ASIGLLIGAQVHLETLTSWQPIAIIALMVTLFTPLAHWLNYRFMQRFGGYDVPTAFFCAA 125 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 PGGL + + A++A++ Q LR+ ++ P + + Sbjct: 126 PGGLIEAMTLGERAGANVAILTVQQFLRIVLVVTLIPLLMSIWVGH 171 >UniRef50_C6Q0M4 Membrane protein AbrB duplication n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0M4_9CLOT Length = 363 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 153/357 (42%), Gaps = 23/357 (6%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 M ++++L L + +PA ++G M+ +FS+ +P++ + Q G I Sbjct: 8 IMTLIVAILGGTIALRLKIPAGAMVGSMVVVAVFSVITGHAFIPQNIKIITQICAGAYIG 67 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 ++ + + + + +++ + +G+++ R + + T + ++P G M Sbjct: 68 ASIKRKDVLEMRLIIKPAILMVVSMITLDLFMGYVMFRVTRIDLITALFSTAPAGIVDMS 127 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG----------------------D 164 ++ D+GAD V + +R++ V + + Sbjct: 128 LISDDFGADTSKVVVLHLIRLVTVLIVFPPMMNFIAKSFKNEDKNALDEIASSVDEANLQ 187 Query: 165 NAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT 224 ++ SINLL+T +LA+ G +G +L++P+GTM M A L Sbjct: 188 RKSNRTKNKSTLKEKSINLLITTVLALATGLIGYILKIPAGTMTFSMAAVGALNVIFDKG 247 Query: 225 IELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFM 284 +P L + M G IG +++ L + + ++++ + + + + Sbjct: 248 F-MPLNLRRLTQMFAGALIGSRVTYGDIVQLKSILIPAFILLIGIISVNLFIGFLINKTS 306 Query: 285 HIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 ++ +T+ LA++PGGL +A+IA D I + T+R+ +++ P + + +++ Sbjct: 307 GLELITSLLASAPGGLSDMALIAKELGGDAPKIAILHTVRVVTVIGIFPLLIKIVTS 363 Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 86/170 (50%), Gaps = 1/170 (0%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 INL++T+++A++ GT+ L++P+G M+ M+ AV +P+ + + + Sbjct: 3 FMINLIMTLIVAILGGTIALRLKIPAGAMVGSMVVVAVFSVITGHAF-IPQNIKIITQIC 61 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 G IG ++ +L + +L + +++ + M + + R ID +TA +T+P Sbjct: 62 AGAYIGASIKRKDVLEMRLIIKPAILMVVSMITLDLFMGYVMFRVTRIDLITALFSTAPA 121 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 G+ +++I+ AD + ++ + +RL ++L+ P + FI+ Sbjct: 122 GIVDMSLISDDFGADTSKVVVLHLIRLVTVLIVFPPMMNFIAKSFKNEDK 171 >UniRef50_Q3IVJ5 AbrB protein (AidB regulator) n=3 Tax=Rhodobacteraceae RepID=Q3IVJ5_RHOS4 Length = 354 Score = 160 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 187/345 (54%), Gaps = 3/345 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 LQW +L V L G A+ LPA L++GP+I G IF +RG +++PR A+ AAQ I G Sbjct: 10 WLQWAVLAVGGLAAGQGLQALGLPAGLMVGPLILGAIFGLRGAQVRMPRPAYQAAQGIAG 69 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 C+IA ++ IL P++ +++T L++ G + ++ + WG PG A Sbjct: 70 CLIALHIDPGILARAVELGPVLGIFVVLTFLAACATGLIAAAWTGIDREVAIWGFLPGMA 129 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 ++A++ + G D R+VAF+Q LR++ V + V V ++ G A ++ P + Sbjct: 130 GTVIAISHERGLDSRMVAFIQILRLMMVISSMVGVAMLLAGTGAHPLSGTAA--PGLLST 187 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L + A+ L LP+G L+P+ A L + I +P WL+A A++ +G + Sbjct: 188 LRAGGIAALGVAAARWLPALPAGASLVPLTLAAGLSVAG-VNIAMPGWLVAAAFLWLGLQ 246 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGL F +++ LR LP ++ + L+ CAG L+ +D ++A LAT PG +D+ Sbjct: 247 IGLRFTPELMRTGLRALPALVAASLLLILFCAGSGLLLSWIADVDPLSALLATVPGSIDS 306 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 +A+IA G+ AD+A +M +QT+RLF++ L GP A R Sbjct: 307 IAIIAIGAEADVAFVMTLQTIRLFAVALLGPMAAMLFLRLLRPRP 351 Score = 51.1 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 1/164 (0%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 P + + + + AG L LP+G M+ P++ GA+ + +P A Sbjct: 8 PAWLQWAVLAVGGLAAGQGLQALGLPAGLMVGPLILGAIFGLRG-AQVRMPRPAYQAAQG 66 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 G I L D IL RA+ P + + + + ID A P Sbjct: 67 IAGCLIALHIDPGILARAVELGPVLGIFVVLTFLAACATGLIAAAWTGIDREVAIWGFLP 126 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 G TV I+ D ++ +Q LRL ++ + +A ++ Sbjct: 127 GMAGTVIAISHERGLDSRMVAFIQILRLMMVISSMVGVAMLLAG 170 >UniRef50_A3VX57 Putative uncharacterized protein n=4 Tax=Rhodobacteraceae RepID=A3VX57_9RHOB Length = 350 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 132/309 (42%), Gaps = 1/309 (0%) Query: 31 LGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLV 90 + +IA + + P+ L AI+G MI +T ++ T A+ L Sbjct: 37 ISALIATALPERLPTGYRFPQKLRLMFIAIIGLMIGAQVTPALFTEAHHYALTFGAVTLF 96 Query: 91 TLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFV 150 L+ A+ + T + S+PGG + + + GAD+ + Q+LR++ V Sbjct: 97 VGLAHAMGYTIFRHLGGYDPTTAFYASTPGGLYESIELGEAAGADVTRLMMQQFLRIIVV 156 Query: 151 AGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI-NLLLTILLAVVAGTVGCLLRLPSGTMLI 209 A L + LG + + P V +L L +L + +G LLRLP+G M Sbjct: 157 VTALPLGLSLWLGAPVGSSAGMTMARPDVPWSDLPLIVLAGLGGLGLGHLLRLPAGQMTG 216 Query: 210 PMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFAL 269 PM A L ++ ++P+WL+ MA + +G +G+ F LR L ++ A+ Sbjct: 217 PMALAAALSLSGWLSFDIPQWLVNMAQIVLGTALGMRFTGLSRSLLLRGAALALAAVGAM 276 Query: 270 LAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSIL 329 L + G+A L + +PGG+ +A++A A+ A + R+ + Sbjct: 277 LTLGVGLALALHEMTGEAVDVLLITLAPGGVTEMALVALSLQANPAFVTIHHIYRIVLTV 336 Query: 330 LTGPAIARF 338 LT I R Sbjct: 337 LTLGVITRL 345 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 1/136 (0%) Query: 26 PAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIV 84 PA + GPM S+ G ++ +P+ AQ +LG + TG + L + Sbjct: 210 PAGQMTGPMALAAALSLSGWLSFDIPQWLVNMAQIVLGTALGMRFTGLSRSLLLRGAALA 269 Query: 85 LAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQY 144 LA + L + L + + +PGG M +A A+ V Sbjct: 270 LAAVGAMLTLGVGLALALHEMTGEAVDVLLITLAPGGVTEMALVALSLQANPAFVTIHHI 329 Query: 145 LRVLFVAGAAVLVTRM 160 R++ ++TR+ Sbjct: 330 YRIVLTVLTLGVITRL 345 >UniRef50_D0RN43 Putative ammonia monooxygenase superfamily protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN43_9RICK Length = 351 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 127/306 (41%), Gaps = 4/306 (1%) Query: 41 SMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGW 100 S + + FL I+G ++A + ++L + + +A+++ T++ S +V + Sbjct: 46 SFTSYKITFDKKIFLPVLLIIGVILAGSFNITLLYKIHLWIYSSIAMIVCTIIGSIVVAF 105 Query: 101 LLVRYSSLPGNTGAWGSSPGG---AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLV 157 + PG AA + D + V Q RVLF+ V Sbjct: 106 YFYKVCKFRKLVAVLAGLPGAFVVIAAAINQMTDSKKESGQVVIPQATRVLFIVLILPFV 165 Query: 158 TRMMLGDNAEAVNQHIVWFP-PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAV 216 +G + + + + + L+ + +A + L++PS +L M+ + Sbjct: 166 FVTQVGYQEISSHGNNPDYSLRYFLELIFLLGIAQLGSMGLKRLKVPSAPILAAMILCGI 225 Query: 217 LQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGM 276 + ++ T P++ + +A++ +G IG + + LL I A Sbjct: 226 FYTFEITTARFPDFFINIAFVFLGSAIGCRLSGLPIKEIGFYSLHGFIVSVLLLGIAAIF 285 Query: 277 AWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 A+ L F+ DFM A+L+ +PGGL + VI+ N D + LR+F I+ + P I Sbjct: 286 AYLLKVFLGFDFMAAFLSFAPGGLHEMVVISIAYNIDPLFVTYHHFLRIFLIIFSIPFIL 345 Query: 337 RFISTY 342 ++ S + Sbjct: 346 KYFSKH 351 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 63/157 (40%), Gaps = 1/157 (0%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMI-AGIIFSMRGITLQLPRSAFLAAQAILGCMIAQ 67 L ++ L S+G + +P+A +L MI GI ++ T + P A LG I Sbjct: 195 LLGIAQLGSMGLKRLKVPSAPILAAMILCGIFYTFEITTARFPDFFINIAFVFLGSAIGC 254 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 L+G + + + ++ L +AI +LL + +PGG MV Sbjct: 255 RLSGLPIKEIGFYSLHGFIVSVLLLGIAAIFAYLLKVFLGFDFMAAFLSFAPGGLHEMVV 314 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGD 164 ++ Y D V + +LR+ + + + + Sbjct: 315 ISIAYNIDPLFVTYHHFLRIFLIIFSIPFILKYFSKH 351 >UniRef50_Q1YFT4 Possible ammonia monooxygenase n=2 Tax=Aurantimonadaceae RepID=Q1YFT4_MOBAS Length = 366 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 83/317 (26%), Positives = 137/317 (43%), Gaps = 4/317 (1%) Query: 26 PAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVL 85 P A LLGP++ S+ G+ +LP+ A ILG +T ++L +A+ WP+ Sbjct: 32 PVAWLLGPVLVVSAASIAGLDTRLPQGLRTLAFFILGVQAGSGVTPAVLDQMAI-WPLSF 90 Query: 86 AILLVTLLSSAIVGWLLVRYS-SLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQY 144 + ++ +L IV +RY +T + S PG + ++A A + AD+ V +Q Sbjct: 91 TVQMLGILVVIIVTRAFLRYGLGWDRDTALFASLPGALSFVLAAASETRADLPRVTIVQS 150 Query: 145 LRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPS 204 +R+L + GA V G P LL + + V A +G L+RLP Sbjct: 151 VRLLILIGALTPVLGWFEGGEDVVAASRGTDGP--LTEYLLLLFVCVAAAALGHLVRLPG 208 Query: 205 GTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILL 264 G ML ++ A + G+ T+ +P L + + +G IG LP + Sbjct: 209 GMMLGALIGSAFMHVGEFATVAIPPALAVPSLILLGALIGSRLQGLDRKGVFALLPAAIG 268 Query: 265 SIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLR 324 S + I A + I LA +PG L+ + V+A + D A + A +R Sbjct: 269 SFAIGIVISAISVAVAVLVLEISVGKVALAYAPGALEALTVLAFQFDVDPAYVAAHHVVR 328 Query: 325 LFSILLTGPAIARFIST 341 I L P +A+ I+ Sbjct: 329 FICIALMVPLLAKHIAR 345 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 1/168 (0%) Query: 172 HIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 W NL+ T+ LA + G L LP +L P+L + L T LP+ L Sbjct: 1 MTGWDRRRIGNLVATLALAALGGAGAAALGLPVAWLLGPVLVVSAASIAGLDT-RLPQGL 59 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 +A+ +G + G G +L + + + +L + L + D TA Sbjct: 60 RTLAFFILGVQAGSGVTPAVLDQMAIWPLSFTVQMLGILVVIIVTRAFLRYGLGWDRDTA 119 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 A+ PG L V A+ + AD+ + +Q++RL ++ + + Sbjct: 120 LFASLPGALSFVLAAASETRADLPRVTIVQSVRLLILIGALTPVLGWF 167 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 1/172 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAI 60 P+ ++ +L + + + V LP ++LG +I + T+ +P + + + + Sbjct: 183 PLTEYLLLLFVCVAAAALGHLVRLPGGMMLGALIGSAFMHVGEFATVAIPPALAVPSLIL 242 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG +I L G + P + + ++ SAI + V + A +PG Sbjct: 243 LGALIGSRLQGLDRKGVFALLPAAIGSFAIGIVISAISVAVAVLVLEISVGKVALAYAPG 302 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH 172 A+ +A + D VA +R + +A L+ + + Sbjct: 303 ALEALTVLAFQFDVDPAYVAAHHVVRFICIALMVPLLAKHIARPGDTVAVPP 354 >UniRef50_B4U2X4 Putative ammonia monooxygenase n=3 Tax=Streptococcus dysgalactiae group RepID=B4U2X4_STREM Length = 398 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 73/346 (21%), Positives = 145/346 (41%), Gaps = 14/346 (4%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 M + L + + +PA ++G M+A + S+ ++ + AQ I G I Sbjct: 50 LMTLFVGTLGGLVAKRLSIPAPFMIGSMVAVALASILTKQVEAISPMKIFAQIISGAYIG 109 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 Q+++ S L L +++++ + L+ +G +LV L T PGG + Sbjct: 110 QSVSKSDLLNLPKLAKSIISLMALFTLNMLCLGLVLVYCFDLDPVTALLSCLPGGIMDVS 169 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGD-------------NAEAVNQHI 173 MA D GA +VA +Q R++ + + + + Sbjct: 170 LMAVDMGAKADIVATLQSARLIGMLLLLPAWVAFWVNRFDPKAKATKKKIVKSASSQDTR 229 Query: 174 VWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLA 233 N + + +A + G +G L++P G +++ +L L+ + T ++P L Sbjct: 230 PSRKEQLWNNVQVLSIATIGGLIGLGLKIPVGALIVSLLFSTALKVLR-QTSQMPSTLRY 288 Query: 234 MAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 +A + G IG F + LL+ R + ILL + + L I + + + +D +A Sbjct: 289 IAQVFAGSIIGTSFTQDSLLQMGRLIVPILLLLSSYLIINLFFGYIMYKKGILDLQSALF 348 Query: 294 ATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 A+SP G ++++A DM I +Q R ++ P + +++ Sbjct: 349 ASSPAGATDISLLAGELGGDMPKIAGIQISRTLYTVVIMPLLVKWL 394 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 2/169 (1%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 +++L+T+ + + G V L +P+ M+ M+A A+ + + A + G Sbjct: 47 LSILMTLFVGTLGGLVAKRLSIPAPFMIGSMVAVALASILTKQVEAISP-MKIFAQIISG 105 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 IG K LL + I+ + + L +D +TA L+ PGG+ Sbjct: 106 AYIGQSVSKSDLLNLPKLAKSIISLMALFTLNMLCLGLVLVYCFDLDPVTALLSCLPGGI 165 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGP-AIARFISTYAPKRSA 348 V+++A A ++ +Q+ RL +LL P +A +++ + PK A Sbjct: 166 MDVSLMAVDMGAKADIVATLQSARLIGMLLLLPAWVAFWVNRFDPKAKA 214 >UniRef50_A5TXE3 Possible ammonia monooxygenase n=8 Tax=Fusobacterium RepID=A5TXE3_FUSNP Length = 363 Score = 157 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 130/335 (38%), Gaps = 12/335 (3%) Query: 16 LSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILT 75 +PAA +LG + IF++ LP Q G I + Sbjct: 28 GGYLADKKKVPAAYMLGALFLVAIFNIFFNKAFLPNYFKFLTQIATGTFIGSKFRSEDVK 87 Query: 76 TLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGAD 135 L + ++++ ++ S I+ +L+ + + T + ++PGG + +A D+ A+ Sbjct: 88 MLKKVIIPGMTMVVLMIIFSFILSYLMSTFLGIDNLTSFFATAPGGIMDISLIAYDFKAN 147 Query: 136 IRLVAFMQYLRVLFVAGAAVLVTR-----------MMLGDNAEAVNQHIVWFPPVSINLL 184 VA +Q +R++ V T+ + + + + + L Sbjct: 148 TSQVALLQLIRLISVISFVPFFTKKCYERSKKKNISLEQEIKNEIREEEKVEDKSEKSFL 207 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 TI++ ++ G +G LP+GTM M A + +P L + G IG Sbjct: 208 FTIIVGIIGGIIGYFSHLPAGTMSCSMALVAYFNV-ETHKAYMPLTLRKIIQSFGGALIG 266 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 ++ + I+L I + + + L + TA L+ SPGG+ ++ Sbjct: 267 AKVTLSDVIALKDLVFPIILIIIGFCLMNVFVGFFLYKTTKFSLSTALLSASPGGMSDIS 326 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 ++A A+ + +MQ LR I+ P I + + Sbjct: 327 LMAEDLGANGPQVASMQFLRAIFIVGVYPIIIKIL 361 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 67/139 (48%) Query: 24 HLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPI 83 HLPA + M F++ +P + Q+ G +I +T S + L Sbjct: 224 HLPAGTMSCSMALVAYFNVETHKAYMPLTLRKIIQSFGGALIGAKVTLSDVIALKDLVFP 283 Query: 84 VLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQ 143 ++ I++ L + VG+ L + + +T +SPGG + + MA+D GA+ VA MQ Sbjct: 284 IILIIIGFCLMNVFVGFFLYKTTKFSLSTALLSASPGGMSDISLMAEDLGANGPQVASMQ 343 Query: 144 YLRVLFVAGAAVLVTRMML 162 +LR +F+ G ++ +++ Sbjct: 344 FLRAIFIVGVYPIIIKILF 362 Score = 97.7 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 71/154 (46%), Gaps = 1/154 (0%) Query: 193 AGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQIL 252 G + ++P+ ML + A+ LP + + +A G IG F + + Sbjct: 28 GGYLADKKKVPAAYMLGALFLVAIFNIF-FNKAFLPNYFKFLTQIATGTFIGSKFRSEDV 86 Query: 253 LRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNA 312 + + + + ++ +++ ++ F+ ID +T++ AT+PGG+ +++IA A Sbjct: 87 KMLKKVIIPGMTMVVLMIIFSFILSYLMSTFLGIDNLTSFFATAPGGIMDISLIAYDFKA 146 Query: 313 DMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + + + +Q +RL S++ P + + K+ Sbjct: 147 NTSQVALLQLIRLISVISFVPFFTKKCYERSKKK 180 >UniRef50_D2S6B3 Membrane protein AbrB duplication n=2 Tax=Actinomycetales RepID=D2S6B3_9ACTO Length = 355 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 110/336 (32%), Positives = 171/336 (50%), Gaps = 3/336 (0%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGCMIAQ 67 + +L +++ + LP+ L G ++AG++ + G L +PR A AAQ ++G I Sbjct: 16 VVATALAVTLALDVLDLPSPSLFGGLVAGLVRGLAGRRRLAVPRPATTAAQGLIGVSIGA 75 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 + L + +W VL + + TLL S + G L+ + TGA+ GGA+ + A Sbjct: 76 LVDLDTLEAIGRDWLPVLLVTVGTLLLSVLAGLLMRLQPGVSPVTGAFAMVAGGASGITA 135 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTI 187 M+++ GAD R+VA +QYLRVL + + + G + + P LL Sbjct: 136 MSRELGADERMVAVLQYLRVLLIVVLMPVAAVALFGAEPGSGGTTVDDAGPGWPAGLLFA 195 Query: 188 LLAVVAGT-VGCLLRLPSGTMLIPMLAGAVLQSGQLITIE-LPEWLLAMAYMAIGWRIGL 245 + ++AGT + LLR+P T+L P+L A L G L +P L A++ IG +GL Sbjct: 196 AVCLLAGTPLARLLRIPVPTLLGPLLVAAGLDLGGLSGGADVPAPLGTAAFLVIGLVVGL 255 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 FD+ L R +P L I L+A CAG+ L + AYLAT+PGGL V Sbjct: 256 NFDRDSLRTVGRAMPLALAVILGLVAACAGLGAVLAATTGASALDAYLATTPGGLYAVLA 315 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 A AD ++A+Q LRLF +LL+ P +AR++ Sbjct: 316 TAQDGGADATFVLAVQVLRLFVMLLSAPLLARWLRR 351 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 57/163 (34%) Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 + A+ +L LPS ++ ++AG V + +P A IG IG Sbjct: 16 VVATALAVTLALDVLDLPSPSLFGGLVAGLVRGLAGRRRLAVPRPATTAAQGLIGVSIGA 75 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 D L R +LL L + + + +T A GG + Sbjct: 76 LVDLDTLEAIGRDWLPVLLVTVGTLLLSVLAGLLMRLQPGVSPVTGAFAMVAGGASGITA 135 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 ++ AD ++ +Q LR+ I++ P A + P Sbjct: 136 MSRELGADERMVAVLQYLRVLLIVVLMPVAAVALFGAEPGSGG 178 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 24/161 (14%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 +P L +L L L +PA AA + Sbjct: 213 VPTLLGPLLVAAGLDLGGLSGGADVPAP------------------------LGTAAFLV 248 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G ++ N L T+ P+ LA++L + + A +G +L + ++PG Sbjct: 249 IGLVVGLNFDRDSLRTVGRAMPLALAVILGLVAACAGLGAVLAATTGASALDAYLATTPG 308 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 G A++A AQD GAD V +Q LR+ + +A L+ R + Sbjct: 309 GLYAVLATAQDGGADATFVLAVQVLRLFVMLLSAPLLARWL 349 >UniRef50_C4ZKZ9 Membrane protein AbrB duplication n=1 Tax=Thauera sp. MZ1T RepID=C4ZKZ9_THASP Length = 352 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 67/339 (19%), Positives = 127/339 (37%), Gaps = 2/339 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 Q L+ L +HLP ++GP+ A M L+ Q +G Sbjct: 12 WRQILPTLALATLAGWLAERLHLPLPWMIGPLFAVAGARMADRDLRPLPGGRQTGQWAIG 71 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + + ++ L+++ P+V+A L +L+ ++L+R + T + + PGGA Sbjct: 72 AALGLYFSPEVVAQLSLHAPLVIAAALGSLVLGMAYAFILLRLGGVDAPTAFFAALPGGA 131 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 + M +A +G + +A +RV+ V ++ Sbjct: 132 SEMANLADRHGGAVDRIAAAHAIRVMMVVSVLPFALTFAGVQGSDVYVPLARDVDAQHFP 191 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LL+ L V LLR+ + +L P+L A+ + LP W++ + IG Sbjct: 192 LLVGASLLGVGA--FKLLRIANAWVLGPLLGVALATLAGVPLSALPPWVVNGGQLLIGCA 249 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G F + A R + L+ + + +A L + T LAT+PGG+ Sbjct: 250 LGCRFSRAFFRAAPRFMSVAALTGAMSIVLAFALATLLGLVAEVPLSTLALATAPGGVSE 309 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 + + A + L+ LR+ + + Sbjct: 310 MCITAKVLQLGVPLVTVCHVLRVVVLTVGAQWSFGIFRR 348 >UniRef50_UPI0001AF51FB hypothetical protein MkanA1_02057 n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF51FB Length = 411 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 97/340 (28%), Positives = 153/340 (45%), Gaps = 9/340 (2%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMI-AGIIFSMRGITLQLPRSAFLAAQAILGCM 64 W +L++ L + F A H+P L+ + AG + + G + AQ +G Sbjct: 11 WLCCLLLTMTLGLLFSAFHMPIGWLIAALAGAGCMAVLAGREFVPHKFLLRPAQGCIGMA 70 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSS-LPGNTGAWGSSPGGAA 123 +A L+G TT+A I TL+ + G +L R + L T + GGA+ Sbjct: 71 VAVPLSGLASTTIAGYLGISAVCSAATLILCLVCGLVLTRAAKTLSPATALLSTLAGGAS 130 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 + MA + D R VA QYLRV+ VA LV + + A A H ++ Sbjct: 131 GICTMAPELRVDHRYVALSQYLRVVVVALTVPLVLQCV---GAPAARSHPAGSHVTLVSS 187 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITI--ELPEWLLAMAYMAIGW 241 + I++ V AG G + P+ ++ PML V Q LP L A+AY+ IGW Sbjct: 188 VAAIVVIVAAGYAGLKWKWPAPFLIAPMLVALVTQLPGPGQFVLALPPALNAVAYVVIGW 247 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 + G L + LR LP I +A C + + ++ + + F AYLAT+PGG+ Sbjct: 248 QAGGAVTLGALRQCLRLLPLTCAFIGVAVAGCLVLTFVVSAWTGVSFAQAYLATTPGGIY 307 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 +AA +A L+ MQ LRL + + ++ ++T Sbjct: 308 --VALAASDSAAEPLVATMQVLRLLVMNIAAIIGSKLLTT 345 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 5/150 (3%) Query: 26 PAALLLGPMIAGIIFSMRG---ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWP 82 PA L+ PM+ ++ + G L LP + A ++G +T L P Sbjct: 207 PAPFLIAPMLVALVTQLPGPGQFVLALPPALNAVAYVVIGWQAGGAVTLGALRQCLRLLP 266 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 + A + V + ++ +++ ++ + ++PGG VA+A A LVA M Sbjct: 267 LTCAFIGVAVAGCLVLTFVVSAWTGVSFAQAYLATTPGGIY--VALAASDSAAEPLVATM 324 Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQH 172 Q LR+L + AA++ ++++ N+ Sbjct: 325 QVLRLLVMNIAAIIGSKLLTTQKNSFPNEP 354 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 1/149 (0%) Query: 200 LRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPL 259 +P G ++ + + ++LL A IG + + L Sbjct: 28 FHMPIGWLIAALAGAGCMAVLAGREFVPHKFLLRPAQGCIGMAVAVPLSGLASTTIAGYL 87 Query: 260 PQILLSIFALLAICAGMAWGLTRFMH-IDFMTAYLATSPGGLDTVAVIAAGSNADMALIM 318 + A L +C LTR + TA L+T GG + +A D + Sbjct: 88 GISAVCSAATLILCLVCGLVLTRAAKTLSPATALLSTLAGGASGICTMAPELRVDHRYVA 147 Query: 319 AMQTLRLFSILLTGPAIARFISTYAPKRS 347 Q LR+ + LT P + + + A + Sbjct: 148 LSQYLRVVVVALTVPLVLQCVGAPAARSH 176 >UniRef50_A8LSV3 Putative uncharacterized protein n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LSV3_DINSH Length = 342 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 1/330 (0%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNL 69 ++L F + LP LLGP+ A + +M G+ ++ + A + +LG + L Sbjct: 8 FAVALAGVGLFQWLDLPLPWLLGPIFACLTAAMLGVPMRSLKPINEATRMVLGVAVGATL 67 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T +L T WP ++ + ++ + + R T + + PGG M+ Sbjct: 68 TPPVLATFPAMWPTLMLVPVMVVAIGLVGVPYFRRLWGYDPATAYYSAMPGGLQDMLLFG 127 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILL 189 ++ G ++R ++ + RV + A + + + G + + PV + L L Sbjct: 128 EEAGGNVRTLSLIHATRVTVIVVALPFLLKGVWGADLGNPPGASLGVVPVH-EMGLMGLC 186 Query: 190 AVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDK 249 A+V + L +L PM+ L+ P + A IG IG + Sbjct: 187 AIVGWWGARRIGLFGAAILGPMIVTGAAAMSGLLENRPPAEAIWAAQFFIGVTIGCKYVG 246 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 R L L L+ + G+ M LA +PGG + V+A Sbjct: 247 ITWGEIRRDLAAGLGFCGILIVLTLIFVEGVYLAGLAPGMETLLAFAPGGQAELTVLALI 306 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIARFI 339 AD+A ++A LR+F ++L P + R + Sbjct: 307 VGADVAFVVAHHILRIFVVILGAPIVVRML 336 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 1/167 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQA 59 +PV + G++ + +++ G + L A +LGPMI +M G+ + P A AAQ Sbjct: 175 VPVHEMGLMGLCAIVGWWGARRIGLFGAAILGPMIVTGAAAMSGLLENRPPAEAIWAAQF 234 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +G I G + + L + ++ + I + PG +P Sbjct: 235 FIGVTIGCKYVGITWGEIRRDLAAGLGFCGILIVLTLIFVEGVYLAGLAPGMETLLAFAP 294 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNA 166 GG A + +A GAD+ V LR+ V A +V RM+ +A Sbjct: 295 GGQAELTVLALIVGADVAFVVAHHILRIFVVILGAPIVVRMLGDKDA 341 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 1/157 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 I + +A+ + L LP +L P+ A + L + + M +G Sbjct: 2 IGIFTAFAVALAGVGLFQWLDLPLPWLLGPIFACLTAAMLGVPMRSL-KPINEATRMVLG 60 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 +G +L P ++L ++AI R D TAY + PGGL Sbjct: 61 VAVGATLTPPVLATFPAMWPTLMLVPVMVVAIGLVGVPYFRRLWGYDPATAYYSAMPGGL 120 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 + + + ++ + + R+ I++ P + + Sbjct: 121 QDMLLFGEEAGGNVRTLSLIHATRVTVIVVALPFLLK 157 >UniRef50_D2LU31 Membrane protein AbrB duplication n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LU31_BACS4 Length = 359 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 78/319 (24%), Positives = 133/319 (41%), Gaps = 3/319 (0%) Query: 24 HLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWP 82 LP +LG M +++ T+ P + ILG T T+ Sbjct: 27 DLPLPWVLGAMAFIMLWQGFSKRTILWPSPIKNSGLLILGTFFGLYFTNETFITVGPYIL 86 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 + + ++ + S LL ++ + T GS PGG MV ++ A LVA Sbjct: 87 PYILLTIILIFISIFNSALLAKWIKVDRITSILGSIPGGLTEMVTASESLHARPSLVAIF 146 Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLR- 201 Q +R+L V VT + + + + I+L LL V+ G LR Sbjct: 147 QTVRLLTVLFVVPFVTIHLFTASDVESSFALENEGNEMISLSWGYLLYVIPIVAGITLRN 206 Query: 202 -LPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLP 260 +P+G ++ P+ A+L L + LP +L +A + +G IG + L + Sbjct: 207 VMPAGIIIFPLAITALLNISSLELLPLPSIILIIAQIFVGIGIGKNIHFKDLKIGGKYCF 266 Query: 261 QILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAM 320 AL+AI G+ L + TA L+ +PGGL + + AA AD A++ A+ Sbjct: 267 AYFGLALALIAISFGLGVILAALTSLSLSTAMLSIAPGGLIEMVLTAAAIGADPAIVSAL 326 Query: 321 QTLRLFSILLTGPAIARFI 339 Q +R+ I++ P + ++ Sbjct: 327 QFIRILIIIIFVPPLIKWF 345 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 1/163 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQA 59 M L WG L + +++ L +PA +++ P+ + ++ + L LP + AQ Sbjct: 184 MISLSWGYLLYVIPIVAGITLRNVMPAGIIIFPLAITALLNISSLELLPLPSIILIIAQI 243 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +G I +N+ L + L + S +G +L +SL +T +P Sbjct: 244 FVGIGIGKNIHFKDLKIGGKYCFAYFGLALALIAISFGLGVILAALTSLSLSTAMLSIAP 303 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 GG MV A GAD +V+ +Q++R+L + + + Sbjct: 304 GGLIEMVLTAAAIGADPAIVSALQFIRILIIIIFVPPLIKWFF 346 >UniRef50_B6YYA2 Putative ammonia monooxygenase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYA2_9RHOB Length = 351 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 130/317 (41%), Gaps = 3/317 (0%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQ 67 + ++ + F + PAA L G +A I + G + +P +LG I Sbjct: 13 ITLAIAGAGAGLFSLLGFPAAPLTGSALAVSIGGLLGAPVTVPLWLRTLCFIVLGTGIGS 72 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 +T +++ LA+ + +LS + +LVR+ + SSPG + +++ Sbjct: 73 GVTPAVIDAAVTWPASFLALGISLILSMLLSRMVLVRFFGFDAYNASLASSPGHLSYILS 132 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTI 187 MA D AD+ + Q RVLF+ L ++ + + P ++ LLL Sbjct: 133 MAADAKADVTRIGLAQSTRVLFLTICVPLFITLLFEETGASFLPAQNITPLSAVYLLLG- 191 Query: 188 LLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF 247 A V GT+ ++LP+ +L ML ++ + ++P+W +++ +G IG F Sbjct: 192 --AAVVGTIFLKMKLPAAYLLGGMLVSSLGHLTEFTPGKMPDWATLSSFLVMGALIGTRF 249 Query: 248 DKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307 + + + + + + ++ ++A +PGG++ +A IA Sbjct: 250 KGISPELFAKAICAGIAVTIITVGMAILGVLLAMPLVGLNPSLLFVAFAPGGVEAMAAIA 309 Query: 308 AGSNADMALIMAMQTLR 324 S D + A R Sbjct: 310 VQSGLDPTFVAAHHVFR 326 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 1/147 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQA 59 + L L + + ++ FL + LPAA LLG M+ + + T ++P A L++ Sbjct: 180 ITPLSAVYLLLGAAVVGTIFLKMKLPAAYLLGGMLVSSLGHLTEFTPGKMPDWATLSSFL 239 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G +I G A +A+ ++T+ + + L + L + +P Sbjct: 240 VMGALIGTRFKGISPELFAKAICAGIAVTIITVGMAILGVLLAMPLVGLNPSLLFVAFAP 299 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLR 146 GG AM A+A G D VA R Sbjct: 300 GGVEAMAAIAVQSGLDPTFVAAHHVFR 326 >UniRef50_A1T9W3 Putative ammonia monooxygenase n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T9W3_MYCVP Length = 343 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 163/342 (47%), Gaps = 3/342 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR--GITLQLPRSAFLAAQAILG 62 +W +L ++ +S F LP LL G + +++++ L+LP S F A QA++G Sbjct: 3 RWLVLILMVAAVSSLFTLARLPTPLLFGGLAGALLYALVRPQAPLRLPDSWFQAGQAVVG 62 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 ++ ++ L L W +V+ + +L+ S +VG LL+R T + S GGA Sbjct: 63 VIVGASMDWHSLGALGPRWLVVVGVSCFSLVVSVLVGRLLIRR-GASPATATFASVAGGA 121 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 A + AMA D GAD R+VA +QYLR+L V LV ++ G + + Sbjct: 122 AGLTAMADDLGADARVVAVLQYLRLLVVLVTMPLVVTLVFGAREDGPALGVTGTDWRVDV 181 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 + +A L + + ++A + +P + A+ Y+ IG + Sbjct: 182 PFVAAAVACGLLAGRLLRLPSAAILGPLLVAALLTLVPFFDGAAVPPVVEALGYLVIGVQ 241 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +GL F L R LP LL+I L CAG+ W LT + AYLAT+PGG+ Sbjct: 242 VGLKFTAASLRAIGRMLPTALLTIVVTLVACAGLGWVLTVTTDASPLDAYLATTPGGIYA 301 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 V IAA ++ D+A + A Q LRL +L + P IA ++ A Sbjct: 302 VLGIAAATDGDVAFVAAAQMLRLLIVLASAPLIAAYLRRAAS 343 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 2/167 (1%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQL-ITIELPEWLLAMAYMAIGW 241 L+ IL+ ++ L RLP+ + + + + + LP+ +G Sbjct: 4 WLVLILMVAAVSSLFTLARLPTPLLFGGLAGALLYALVRPQAPLRLPDSWFQAGQAVVGV 63 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G D L ++ L + + L R TA A+ GG Sbjct: 64 IVGASMDWHSLGALGPRWLVVVGVSCFSLVVSVLVGRLLIR-RGASPATATFASVAGGAA 122 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + +A AD ++ +Q LRL +L+T P + + A Sbjct: 123 GLTAMADDLGADARVVAVLQYLRLLVVLVTMPLVVTLVFGAREDGPA 169 >UniRef50_A8TSC8 Putative ammonia monooxygenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSC8_9PROT Length = 361 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 74/324 (22%), Positives = 139/324 (42%), Gaps = 2/324 (0%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 W L +H+P A LLG + A + G+ L +P Q +LG I Sbjct: 13 WAATLTLGAAGGFALDLLHVPLAWLLGSLGAVAAAGLCGVGLSVPPGGRQVGQLLLGTAI 72 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 T ++ +A +++ L+++ + + L R + + T + S PGG A M Sbjct: 73 GLTFTSAVAEAVAGYASVMVLAALLSITYGVVAAYTLRRSAKVDDATAFFASVPGGVAEM 132 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLL 185 +A+ G + V+ Q LR+L V V ++ + + F P+ LL Sbjct: 133 SILAERNGGETAPVSLAQSLRILCVVITIPPVITVLGLTGIDPFEPSTLSFDPMGFGALL 192 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 T+ LA ++P+ +L PM ++ + + +P LL ++ + IG +GL Sbjct: 193 TLALAGGGLLAWR--KVPNAWLLGPMAVAVLVTATESHLSSMPTPLLNLSQVLIGATLGL 250 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 + + LL R LP +LS L+ + + + + T LA SPGG+ +++ Sbjct: 251 RYRRDRLLALRRFLPSAILSTVVLVGLNVATGAVIGLAVGLPVATMALALSPGGMAEMSI 310 Query: 306 IAAGSNADMALIMAMQTLRLFSIL 329 A + + ++ A +R+F ++ Sbjct: 311 TAKVLHLGVPIVSAFHVVRIFLVI 334 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 1/160 (0%) Query: 177 PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 P I T+ L G LL +P +L + A A + + +P + Sbjct: 7 APTVILWAATLTLGAAGGFALDLLHVPLAWLLGSLGAVAAAGLCG-VGLSVPPGGRQVGQ 65 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 + +G IGL F + ++L+ + A+ L R +D TA+ A+ Sbjct: 66 LLLGTAIGLTFTSAVAEAVAGYASVMVLAALLSITYGVVAAYTLRRSAKVDDATAFFASV 125 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 PGG+ ++++A + + A + Q+LR+ +++T P + Sbjct: 126 PGGVAEMSILAERNGGETAPVSLAQSLRILCVVITIPPVI 165 >UniRef50_A9D2G7 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D2G7_9RHIZ Length = 345 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 7/340 (2%) Query: 1 MPVLQWG---MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSA-FLA 56 MP + W + +++L ++ F A+ PA L GP + + G+ +Q P A Sbjct: 1 MPPVSWQASVLTIAVAVLGAVLFAALSFPAPYLTGPATMITLAGLAGMKIQSPPLLLRHA 60 Query: 57 AQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWG 116 ILG I Q +T +L + + A+ L + LVRY S+ T Sbjct: 61 VFVILGLTIGQGVTPEVLDAMRTWPVTLTALAASILAIILLTRAALVRYWSMDPTTAFLS 120 Query: 117 SSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWF 176 SSPG + ++ + + AD++ V+ +Q +RVL + + Sbjct: 121 SSPGHLSYVLGLTEGVKADLKTVSIVQSIRVLALTLLVPAAIALTGQLPERPAVGP---E 177 Query: 177 PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 + L+L IL A + G + L+LP+ ++ ML L ++ + WL A A+ Sbjct: 178 ETALVPLVLMILCAALVGYLLHRLKLPAAYLIGGMLVSVGLHVTGIVEGVMSYWLAAAAF 237 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 +++G IG F L + + + A +D + +A + Sbjct: 238 VSLGALIGSRFSGVTLKELRHAFSAGVAVTVLGVVLAGIFAVIAAEITGMDVVAVLIAFA 297 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 PGGL+T+A ++ D + + RL + + P Sbjct: 298 PGGLETMAAMSVILGIDPTFVASHHVARLLILTVIVPFFV 337 >UniRef50_B4AUN7 Membrane protein AbrB duplication n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AUN7_9CHRO Length = 369 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 6/325 (1%) Query: 21 LAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 + +P LLGP++ G++ ++ LP S AAQ I+ A + + S L A Sbjct: 32 FLLDIPGDWLLGPLLIGVLATLNPDKAQPLPPSLATAAQVIIALGTAASFSLSTLFQAAH 91 Query: 80 NWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLV 139 +L +++T G+LL R++ + TG GS PG ++VAM+++ GAD V Sbjct: 92 YTLAMLMCIVLTGGLCLGKGYLLWRWAGIDIKTGFLGSIPGAGHSIVAMSEEMGADALAV 151 Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVN-----QHIVWFPPVSINLLLTILLAVVAG 194 A QYLR+L V L+ ++ +VN H S+NL L LL + Sbjct: 152 AVFQYLRILLVLILIPLLAGYFFPVDSVSVNVPSVITHQFSLTEFSVNLALLTLLGALGV 211 Query: 195 TVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 G LRLP + P+L G + + LP+ +L + + +G IGL F+ Q + Sbjct: 212 LGGRWLRLPQAVFIGPLLTGLLAFWFFPYPLYLPKLVLNIGLLLLGLSIGLKFNWQAAQK 271 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 ++ + L+ + L+ C G+ + +D +TA L ++PGGL V D Sbjct: 272 LIKAVLIELILVIILILGCLGVGYEFHWLTGVDLITALLGSTPGGLMAVMAATIQLGGDS 331 Query: 315 ALIMAMQTLRLFSILLTGPAIARFI 339 L++ MQ R+F ILL P +A F+ Sbjct: 332 GLVLGMQMSRMFLILLITPWLASFL 356 Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 55/139 (39%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L L + A +AG LL +P +L P+L G + LP L A + I Sbjct: 17 LTLQLAAATLAGIAAFLLDIPGDWLLGPLLIGVLATLNPDKAQPLPPSLATAAQVIIALG 76 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 F L +A +L+ I +C G + L R+ ID T +L + PG + Sbjct: 77 TAASFSLSTLFQAAHYTLAMLMCIVLTGGLCLGKGYLLWRWAGIDIKTGFLGSIPGAGHS 136 Query: 303 VAVIAAGSNADMALIMAMQ 321 + ++ AD + Q Sbjct: 137 IVAMSEEMGADALAVAVFQ 155 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 1/145 (0%) Query: 22 AVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVN 80 + LP A+ +GP++ G++ L LP+ +LG I L Sbjct: 216 WLRLPQAVFIGPLLTGLLAFWFFPYPLYLPKLVLNIGLLLLGLSIGLKFNWQAAQKLIKA 275 Query: 81 WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVA 140 I L ++++ +L VG+ + + T GS+PGG A++A G D LV Sbjct: 276 VLIELILVIILILGCLGVGYEFHWLTGVDLITALLGSTPGGLMAVMAATIQLGGDSGLVL 335 Query: 141 FMQYLRVLFVAGAAVLVTRMMLGDN 165 MQ R+ + + +L Sbjct: 336 GMQMSRMFLILLITPWLASFLLKTP 360 >UniRef50_C0XTR9 Ammonia monooxygenase n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XTR9_9CORY Length = 355 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 93/341 (27%), Positives = 156/341 (45%), Gaps = 7/341 (2%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAI 60 L+W ++ S+ L + +P A +LG ++A ++ G L + AA+ I Sbjct: 9 TWLRWLIVAPASVALGFVLSRLGVPVAWILGAILASGAMALASGRDLPVDPRILSAARGI 68 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G + A +L L + + +VT+ + G L ++ + TG G Sbjct: 69 IGVIAALSLANVPPRELLGYLAPGVMVAVVTVGLAFAGGLFLAKH-GVSRETGILSLLAG 127 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 GA+ M A+A+D G D R VA QYLR+L V+ LV + + Sbjct: 128 GASMMPAIAEDVGGDPRYVALSQYLRLLAVSVTLPLVAAFLTAPGGTGHAPEASAW---- 183 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 LL L V +G LL +P+ + P+ AV+ S + P + +A++AIG Sbjct: 184 WVWLLIPALVAVGQPLGTLLHMPNSKVFGPLTLTAVVASLIDAPLTPPPAITIVAFLAIG 243 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 W G G + L R LP + I AL+ CA + W ++ ++ I + YLATSPG + Sbjct: 244 WLCGGGLNVAALRLFARLLPVTVTYIVALMGACAAVGWVVSAWLDITYYEGYLATSPGAI 303 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 +TV ++A A A ++A+Q +RL +LL + + + Sbjct: 304 ETVLALSAEGGAGPA-VIAIQLIRLCGVLLFAAYLPKLLKR 343 >UniRef50_UPI0001C32335 membrane protein AbrB duplication n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32335 Length = 358 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 109/340 (32%), Positives = 169/340 (49%), Gaps = 6/340 (1%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCM 64 W L +LL++ A+ LP+A L G ++ G+ ++R +L F +AQA+ G Sbjct: 7 WLALGAATLLVAWALDALGLPSATLFGALVVGLAVALRLPGRFRLGEGTFRSAQALTGVT 66 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + + L LA W V + TLL + G ++ R + + T A G GGA+ Sbjct: 67 LGCYMQSESLDALAGAWLPVALVSAATLLLCLLAGHVMARVTDVDEPTAALGMVAGGASG 126 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV----S 180 +V MA++ GAD R+VAFMQY RVL + A L+ + + A + Sbjct: 127 IVTMARELGADDRIVAFMQYARVLLIVLATPLLVALFFPGHHGAPGIGDGGGDGPFLGTA 186 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT-IELPEWLLAMAYMAI 239 + T+ +A+ G L+RLP+G +L P+L A L +P L A+ AI Sbjct: 187 GDWAATVAIALAGAAAGRLVRLPAGVLLGPLLLAAGLTLALPDGSFAVPPLLREAAFAAI 246 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G ++GL F + + R R L ++LS+ AL+ C G+A L H+ + AYLAT+PGG Sbjct: 247 GLQVGLRFTVETIRRLGRLLVPVVLSVVALVVACFGLAVVLHATTHVTLLDAYLATTPGG 306 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 L V A G+ AD ++A+Q LRL ++L P R + Sbjct: 307 LYVVLAAAVGTGADTTFVVAVQGLRLLVMVLLAPFAVRLL 346 Score = 58.4 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 54/162 (33%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 P S L ++ L LPS T+ ++ G + L E A Sbjct: 2 PRSAAWLALGAATLLVAWALDALGLPSATLFGALVVGLAVALRLPGRFRLGEGTFRSAQA 61 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 G +G + L + L A L +C + R +D TA L Sbjct: 62 LTGVTLGCYMQSESLDALAGAWLPVALVSAATLLLCLLAGHVMARVTDVDEPTAALGMVA 121 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 GG + +A AD ++ MQ R+ I+L P + Sbjct: 122 GGASGIVTMARELGADDRIVAFMQYARVLLIVLATPLLVALF 163 Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 52/124 (41%) Query: 45 ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVR 104 + +P AA A +G + T + L V+ ++ +++ + +L Sbjct: 230 GSFAVPPLLREAAFAAIGLQVGLRFTVETIRRLGRLLVPVVLSVVALVVACFGLAVVLHA 289 Query: 105 YSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGD 164 + + ++PGG ++A A GAD V +Q LR+L + A R++LGD Sbjct: 290 TTHVTLLDAYLATTPGGLYVVLAAAVGTGADTTFVVAVQGLRLLVMVLLAPFAVRLLLGD 349 Query: 165 NAEA 168 A Sbjct: 350 RARP 353 >UniRef50_A7IC16 Putative ammonia monooxygenase n=2 Tax=Xanthobacteraceae RepID=A7IC16_XANP2 Length = 367 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 74/333 (22%), Positives = 124/333 (37%), Gaps = 3/333 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 + L F A+ LPAA + G ++ I ++ G+ + +P A +LG + Sbjct: 15 AITLGAGALGGGVFAALGLPAAWISGALVVSIALAVAGVRIAVPEWIRFLAFIVLGTSMG 74 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 LT A + + L + A L R + T W S+PG +V Sbjct: 75 TALTPETFARAATWPISMACLGASVLATMAGGALFLNRVAGWSRETAFWASAPGAFGTVV 134 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT 186 AMA D AD+R VAF Q LR+ + A V V + + + Sbjct: 135 AMAADTSADLRKVAFAQALRLFLLVAALPNVLGATGLTAGGLPPPPHVSTA---LEVAIL 191 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 + + V G L++P G +L + A L + L + LP+ + A++ +G +G+ Sbjct: 192 LGVCVTTGLGAAWLKVPGGLILGALAGSAALHATSLSSAVLPQAFIVPAFVVLGASVGVR 251 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 F L L + ++I A D A +PG L+ + + Sbjct: 252 FLGTTLGTIRAYFFASLGAFLVAVSISTLFALLAAWLTGDDLGKLVTAFAPGALEAMTAL 311 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 D A + A R + + P AR + Sbjct: 312 GFALGYDPAFMSAHHLFRFAGLSVALPVAARLL 344 Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 64/178 (35%), Gaps = 1/178 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAI 60 L+ +L + + +G + +P L+LG + + + LP++ + A + Sbjct: 184 TALEVAILLGVCVTTGLGAAWLKVPGGLILGALAGSAALHATSLSSAVLPQAFIVPAFVV 243 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG + G+ L T+ + L LV + S + L + +PG Sbjct: 244 LGASVGVRFLGTTLGTIRAYFFASLGAFLVAVSISTLFALLAAWLTGDDLGKLVTAFAPG 303 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPP 178 AM A+ G D ++ R ++ A + R++ E PP Sbjct: 304 ALEAMTALGFALGYDPAFMSAHHLFRFAGLSVALPVAARLLFAAVEEVEEVTRHAGPP 361 >UniRef50_A6FPC2 Ureidoglycolate hydrolase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FPC2_9RHOB Length = 361 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 130/343 (37%), Gaps = 1/343 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 ++ + +LL + + P ++G M+ M L +P Q ++ Sbjct: 13 LVHLVAIYAGALLFGLVAHWLRFPLPWMIGAMVFASSVRMLDRPLPVPGQTRQIGQVLVA 72 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + + T + + ++ ++T+ +V L+R + T S P G Sbjct: 73 TSVGLSFTPEAVGAMVSLLIPMVGAAILTIGLGFVVAAFLMRVTRADIITAVLASIPMGP 132 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 +A + V F Q LR++ + + G + V S Sbjct: 133 VESATLAVKHKVRPGPVVFAQTLRIMLLVLLIPPAIVALDGTVKDPVAALSRMEWTASGA 192 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 +LL + V +RL + + + A+ + L P +L +A + +G Sbjct: 193 MLLALA-GVAGAYAARAVRLANPFFVGSLGGAALAAAFSLPITAYPYPVLVLAQVFLGVW 251 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G FD+ ++ A +P +++ L+A+C M LT + L+T+PG + Sbjct: 252 LGAVFDRDLVRHARGFIPGAVMASLLLIALCTCMGMALTWITGEKWQVMMLSTAPGSVTE 311 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 +A+ A +A++ A +R+F IL +I + A + Sbjct: 312 MALTAKILEDGLAVVTAFHVVRIFIILPFASSIIDVTARLAQR 354 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 66/162 (40%), Gaps = 1/162 (0%) Query: 175 WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 W ++L+ A++ G V LR P M+ M+ + ++ + +P + Sbjct: 8 WSLRRLVHLVAIYAGALLFGLVAHWLRFPLPWMIGAMVFASSVRM-LDRPLPVPGQTRQI 66 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 + + +GL F + + + L ++ + + + +A L R D +TA LA Sbjct: 67 GQVLVATSVGLSFTPEAVGAMVSLLIPMVGAAILTIGLGFVVAAFLMRVTRADIITAVLA 126 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 + P G A +A ++ QTLR+ ++L P Sbjct: 127 SIPMGPVESATLAVKHKVRPGPVVFAQTLRIMLLVLLIPPAI 168 >UniRef50_C2AKB5 Membrane protein AbrB duplication n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AKB5_TSUPA Length = 402 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 98/308 (31%), Positives = 148/308 (48%), Gaps = 8/308 (2%) Query: 44 GITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLV 103 G + +P A QA +G M+ L + T+ L I ++T++ S W L Sbjct: 83 GREISVPADASKWTQAFIGVMLGSYLNLEAIRTVGPVIAPFLLISVLTIVLSMFTAWALS 142 Query: 104 R-YSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 R ++L T G GG++A+V + + GA +V MQY RVL V+ A V + Sbjct: 143 RAVTALDQRTATLGLMVGGSSAVVTLCDELGARKDVVGVMQYSRVLLVSLTAPFVMTALA 202 Query: 163 GDNAEAVNQHIVWFPPVS-----INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVL 217 G A Q + V L + I+ A+V +G LRLP G ++ PML AV+ Sbjct: 203 GTAAATSRQRVTDLQIVGRGDQIAGLSIAIVFAIVGMWLGRKLRLPGGGLIGPMLVAAVI 262 Query: 218 QSGQLITIELPEW-LLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGM 276 QL P+ + + +G +GL FD+++L R LP I + I L + A + Sbjct: 263 GGAQLTRGFAPQGAFKELLLIVVGLEVGLMFDRRMLRRLAHLLPAIGVGILFLCGVVALL 322 Query: 277 AWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSN-ADMALIMAMQTLRLFSILLTGPAI 335 A R + AYLAT+PGG++ V AAGS A+MALI +Q+LRL ++L P I Sbjct: 323 AAAAARITGVPLADAYLATTPGGINAVVASAAGSGDANMALIATVQSLRLIIVVLALPLI 382 Query: 336 ARFISTYA 343 ++ A Sbjct: 383 VVAMNRLA 390 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 1/141 (0%) Query: 196 VGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRA 255 + L +P+ ++L + GA L+ I +P IG +G + + + Sbjct: 57 LAALFGVPAPSLLAALALGAGLRIALGREISVPADASKWTQAFIGVMLGSYLNLEAIRTV 116 Query: 256 LRPLPQILLSIFALLAICAGMAWGLTR-FMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 + LL + + AW L+R +D TA L GG V + A Sbjct: 117 GPVIAPFLLISVLTIVLSMFTAWALSRAVTALDQRTATLGLMVGGSSAVVTLCDELGARK 176 Query: 315 ALIMAMQTLRLFSILLTGPAI 335 ++ MQ R+ + LT P + Sbjct: 177 DVVGVMQYSRVLLVSLTAPFV 197 >UniRef50_B6R4M6 Putative ammonia monooxygenase superfamily protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4M6_9RHOB Length = 367 Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 126/322 (39%), Gaps = 7/322 (2%) Query: 25 LPAALLLGPMIAGIIFSMRGITL------QLPRSAFLAAQAILGCMIAQNLTGSILTTLA 78 LPA L GPM+ ++ + L P +G + ++ A Sbjct: 28 LPAGFLAGPMVTVVLAKSISLPLLKDNSFTFPSGLISTNLIFIGAAMGSAVSPDFWAGAA 87 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 + +LA++ V ++ V + + + PG A+AQ+ GA + Sbjct: 88 LWPLSMLALVAVVSGITSCVYLYTYKKCRWGRDEAFFAGLPGALGMTAALAQERGAPMDR 147 Query: 139 VAFMQYLRVLFVAGAAVLV-TRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVG 197 + +Q +R+ + L+ + ++ G + + L+L +L+ V G Sbjct: 148 IMIVQLVRLFLLIAVLPLIISSVVGGKEVIFTEANDAMSLRDGLYLVLAVLICAVCGYAA 207 Query: 198 CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALR 257 L+ P+G + A A L S ++ LP WL Y+ +G +GL K Sbjct: 208 LKLKAPAGMLTGAFFASAALNSTGMLEFALPVWLATPCYILMGTNVGLYIGKMDRNTLKP 267 Query: 258 PLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALI 317 L L+ L++ G A + + I F +L+ +PGG++ + +I+ + D + Sbjct: 268 MLGTSLVVFAISLSVALGGAVVTSWALEISFDKVFLSFAPGGMEAMLLISILLDIDPVFV 327 Query: 318 MAMQTLRLFSILLTGPAIARFI 339 Q R +L P + R++ Sbjct: 328 ATHQLARFMGLLAFMPIVTRYV 349 Score = 47.6 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 1/164 (0%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAILGCMIA 66 + ++ + L + PA +L G A + G+ LP ++G + Sbjct: 195 LAVLICAVCGYAALKLKAPAGMLTGAFFASAALNSTGMLEFALPVWLATPCYILMGTNVG 254 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 + TL L + ++L + + + + +PGG AM+ Sbjct: 255 LYIGKMDRNTLKPMLGTSLVVFAISLSVALGGAVVTSWALEISFDKVFLSFAPGGMEAML 314 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVN 170 ++ D VA Q R + + +VTR +LG + Sbjct: 315 LISILLDIDPVFVATHQLARFMGLLAFMPIVTRYVLGPVSAGQA 358 >UniRef50_C1DL52 Ammonia monooxygenase n=3 Tax=Pseudomonadaceae RepID=C1DL52_AZOVD Length = 364 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 80/338 (23%), Positives = 130/338 (38%), Gaps = 4/338 (1%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 W + L ++ P ++G ++ G A Q ILG I Sbjct: 19 WIFTPLAGALGGWLAQSLGWPLPWMIGSLLGVAALRCLGCPSGAVPHGVKAGQWILGIGI 78 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 + ++L + + +VL L+TLL+S G LL R T + S PGGA M Sbjct: 79 GLHFNRAVLEQILAHLGLVLLGTLLTLLASIF-GILLHRRYGESFATAYFASMPGGANEM 137 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLL 185 V + +GA ++ VA Q LR+ V + D A H P + L+ Sbjct: 138 VNLGGRHGAVLQNVAAAQSLRMFVVLLGIPATYAWLFADGQAADIVHP---GPDAAWLVP 194 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 L + + P+ L +L + + I LP+ A +G +G Sbjct: 195 LFALGGLLALLFQRRNFPNAWQLGALLVSGLCSIAFDLHIGLPDGAGAFGQWLVGSTLGC 254 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 FD+ RA L + LL+ A + I +A ++ +D L PGG+ +++ Sbjct: 255 HFDRAFFRRAPAFLLRTLLTTLAAILIALPIALAMSWASGLDARALLLGMVPGGIAEMSL 314 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 A + + L+ AMQ LRL +L + R S Sbjct: 315 TAEALHLLVPLVTAMQVLRLLLVLFLAAPVFRLCSERL 352 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 2/172 (1%) Query: 168 AVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIEL 227 V + + T L + G + L P M+ +L A L+ + + Sbjct: 4 GVPPSLANLAARCRPWIFTPLAGALGGWLAQSLGWPLPWMIGSLLGVAALRCLGCPSGAV 63 Query: 228 PEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHID 287 P + +G IGL F++ +L + L L +LL L L R Sbjct: 64 PHG-VKAGQWILGIGIGLHFNRAVLEQILAHLGLVLLGTLLTLLASI-FGILLHRRYGES 121 Query: 288 FMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 F TAY A+ PGG + + + A + + A Q+LR+F +LL PA ++ Sbjct: 122 FATAYFASMPGGANEMVNLGGRHGAVLQNVAAAQSLRMFVVLLGIPATYAWL 173 >UniRef50_B8FR89 Membrane protein AbrB duplication n=4 Tax=Desulfitobacterium hafniense RepID=B8FR89_DESHD Length = 368 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 140/344 (40%), Gaps = 29/344 (8%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAIL 61 +L G++ L++ F ++ PA ++GPM I GI + G +L + Q ++ Sbjct: 4 LLDLGLMIGLAVAGYGLFRKINFPAPSIMGPMMILGIYQVLGGGLPELSLTIVNILQIVI 63 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + + L L L I + TLLS+ + +++ +++ T + ++PGG Sbjct: 64 GLSLGARINDQKLADLGKVLRPSLVIAVWTLLSTFGMTFIIHQFTP-NMATALFAAAPGG 122 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG------------------ 163 + M +A Y A + +V+ Q++R++ + L+ R + G Sbjct: 123 ISEMTVLALVYDAAVPIVSTYQFVRLVVIISVVPLIARWLQGRQKSKDLAVDQEPAGAVL 182 Query: 164 ---------DNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAG 214 Q + +L L+ + G + L P G ++ M A Sbjct: 183 GGADLEDSQGPESKTAQEQPVSALTTWQILPLYLIGTLGGLLLLALNFPGGGVIGAMAAL 242 Query: 215 AVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICA 274 A+ + P ++ +A + IG IGL F +I+ L I+ ++ Sbjct: 243 AITNVLFKKQYKFPNSVMQIALLGIGMSIGLEFSPEIVRTIREMLLPIVGFSLLIVLSNL 302 Query: 275 GMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIM 318 + W + H D +T L+++PGGL+ + V+A AD I Sbjct: 303 AVGWYIRHLTHWDMITCLLSSAPGGLNQMLVVAEEMKADSLTIS 346 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 1/169 (0%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 ++L L I LAV + + P+ +++ PM+ + Q EL ++ + + Sbjct: 3 FLLDLGLMIGLAVAGYGLFRKINFPAPSIMGPMMILGIYQVLGGGLPELSLTIVNILQIV 62 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 IG +G + Q L + L L+ L GM + + +F + TA A +PG Sbjct: 63 IGLSLGARINDQKLADLGKVLRPSLVIAVWTLLSTFGMTFIIHQFTP-NMATALFAAAPG 121 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 G+ + V+A +A + ++ Q +RL I+ P IAR++ + Sbjct: 122 GISEMTVLALVYDAAVPIVSTYQFVRLVVIISVVPLIARWLQGRQKSKD 170 >UniRef50_A1AYU4 Putative ammonia monooxygenase n=5 Tax=Rhodobacteraceae RepID=A1AYU4_PARDP Length = 343 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 116/289 (40%), Gaps = 1/289 (0%) Query: 55 LAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGA 114 + + ILG + ++T +L L +L + + + + L R T Sbjct: 56 IFMRTILGVAVGASITPGVLAELPDVAASLLFVPGFIGVIALVGYPLFRRVFGFDHATAW 115 Query: 115 WGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIV 174 +G+ PGG M+ ++ G DIR ++ + RVL + A L+ G + + Sbjct: 116 YGAMPGGLQDMLVFGEEAGGDIRALSLIHATRVLVIVTVAPLIMTAWWGVDL-SQPPGTP 174 Query: 175 WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 + + L + ++ L + ++L PM+ A L LIT P ++ Sbjct: 175 MRATGAAEIALMVAAGLIGWKGAERLGIFGASILGPMVLTAALSLSGLITQRPPAEMIQA 234 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 A IG +G+ + L + ++ L I + + A+LA Sbjct: 235 AQFFIGIAVGVKYAGITLRELRLHVTAGIVYALLLAWISLIFIEVIVHLRLAPGLDAFLA 294 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 PGG + VIA + AD+A +++ LR+ +++ GP + + + + Sbjct: 295 FLPGGQAEMVVIALIAGADLAYVVSHHLLRMIIVIVLGPVVGKVLGRRS 343 >UniRef50_A8LC15 Putative ammonia monooxygenase n=1 Tax=Frankia sp. EAN1pec RepID=A8LC15_FRASN Length = 358 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 87/338 (25%), Positives = 154/338 (45%), Gaps = 3/338 (0%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCMIAQN 68 ++ + +I VH P+ LLG +I G FS+ G + P A A++G Sbjct: 17 VIILVAATILMHLVHSPSPYLLGGLIGGAAFSLAFGAPWRFPEPARHFGMALIGVSAGAL 76 Query: 69 LTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAM 128 + ++ +A VL + VTL+ S G +LV + T + S G A+ + AM Sbjct: 77 IDSDVIRRIASQPVEVLGGVAVTLVFSMATGLVLVLSPKVNLATAVFSSMAGAASGVSAM 136 Query: 129 AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM--LGDNAEAVNQHIVWFPPVSINLLLT 186 A++ AD +V+ +QY RV+ V + LV ++ G + A P + +L+ T Sbjct: 137 AKELDADDAIVSAVQYARVVVVVVSLSLVAPILDRSGSLSPADRGPAAVEPVLWQSLVFT 196 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 L V + +L +++PML + + + +PE LL + Y G +G Sbjct: 197 ALCMGVGLLLAQVLSFSGSRLVVPMLLSMAVALVVSVPLAVPEPLLDLGYTITGLAVGFS 256 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 F + +R P +L+ + + CA + R + I + YLA +PGGL V + Sbjct: 257 FTAATIRLLIRLFPLVLVQLVLSVGGCAVIGIVFARAVGIPDLAGYLAMTPGGLPAVTAV 316 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 A S A++ L++ MQ +R+F+ +L+ I + + Sbjct: 317 AVQSGAEVGLVITMQLVRVFAAILSASLIGTLVRRRSR 354 Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 62/165 (37%) Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 L +++ V A + L+ PS +L ++ GA PE IG Sbjct: 14 LCGVIILVAATILMHLVHSPSPYLLGGLIGGAAFSLAFGAPWRFPEPARHFGMALIGVSA 73 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G D ++ R ++L + L L ++ TA ++ G V Sbjct: 74 GALIDSDVIRRIASQPVEVLGGVAVTLVFSMATGLVLVLSPKVNLATAVFSSMAGAASGV 133 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + +A +AD A++ A+Q R+ ++++ +A + A Sbjct: 134 SAMAKELDADDAIVSAVQYARVVVVVVSLSLVAPILDRSGSLSPA 178 >UniRef50_B9E738 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E738_MACCJ Length = 296 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 4/248 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILG 62 L + ++ + SLL + AVH+ L GP+IA ++ + P+ ILG Sbjct: 11 LNYIIIFIASLLTGLILSAVHVILPWLFGPIIATVLLKKFTSREYRWPKWLSEIGLYILG 70 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I + T I+ + ++ I + +L + ++ ++L R+ + T S PG Sbjct: 71 AQIGASFTKEIVADIQDELLYIILISIFVILLAIMISFVLKRFLNCSLETAILASIPGAL 130 Query: 123 AAMVAMAQD-YGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS- 180 M+ MA++ A++ +V Q R+L V ++ ++ A Sbjct: 131 NQMIVMAEENKNANLLVVTLAQTSRILIVVLTVPFISSLLPEGVHRATISQTPSMVEALN 190 Query: 181 -INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 +LL I V+AG + + P M+ P+ + I +P L+ +A M Sbjct: 191 MQTILLLIGAMVIAGYLYRRIHFPVPDMMGPITVLMIWNLTTGINFMIPTPLIILAQMFF 250 Query: 240 GWRIGLGF 247 G RIGL Sbjct: 251 GIRIGLQL 258 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 82/161 (50%), Gaps = 1/161 (0%) Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 S+N ++ + +++ G + + + + P++A +L+ P+WL + + Sbjct: 10 SLNYIIIFIASLLTGLILSAVHVILPWLFGPIIATVLLKKFTSREYRWPKWLSEIGLYIL 69 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G +IG F K+I+ L I+L ++ + +++ L RF++ TA LA+ PG Sbjct: 70 GAQIGASFTKEIVADIQDELLYIILISIFVILLAIMISFVLKRFLNCSLETAILASIPGA 129 Query: 300 LDTVAVIAAG-SNADMALIMAMQTLRLFSILLTGPAIARFI 339 L+ + V+A NA++ ++ QT R+ ++LT P I+ + Sbjct: 130 LNQMIVMAEENKNANLLVVTLAQTSRILIVVLTVPFISSLL 170 >UniRef50_C8RVR3 Membrane protein n=2 Tax=Corynebacterium jeikeium RepID=C8RVR3_CORJE Length = 385 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 79/348 (22%), Positives = 141/348 (40%), Gaps = 22/348 (6%) Query: 13 SLLLSIGFLAVHLPAALLLGPMIA-GIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTG 71 S+ AV +PAA + +I GI + P+ A + +Q I+ + + LT Sbjct: 22 SIAAGFACEAVGVPAAWIFSFLIVFGIYAIFSDRQVSPPKKAMIPSQVIIALLCSSPLTT 81 Query: 72 SILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQD 131 T+ L+VTL + WLLVR + T + GGA+AMV ++++ Sbjct: 82 IDFGTIVSYAGPTAMSLIVTLAVCLLASWLLVRIHRVGPATSVLATLAGGASAMVMLSRE 141 Query: 132 YGADIRLVAFMQYLRVLFVAGAAVLVTRMML---GDNAEAVNQHIVWFPPVSINL----- 183 AD R V QYLRV + + ++ G A+A + + L Sbjct: 142 LNADTRFVTLTQYLRVSIIVLTLPGLVTLLGRVEGGEADAAERASTGKESLLDGLQTNWQ 201 Query: 184 ------LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT---IELPEWLLAM 234 ++ + + + S +L+ + + + I L + Sbjct: 202 GIVGAVVVGLAVWAFTRLTARWFSISSPYLLLSIAFAMIGVMVFGVPHEFIAPNGLLEKL 261 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 AY +G + G K L + ++ LP IL I ++A G A+ + + AYLA Sbjct: 262 AYALVGVQAGGTLTKGALRQFVKALPVILGVIALMIASSIGTAFAIAGLWDFKVLDAYLA 321 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLT---GPAIARFI 339 T PGG+ V A + + ++ +Q +R+ ++L+ P I R++ Sbjct: 322 TVPGGIYAVLAFAHDAGSQP-IVTVIQVMRMIAMLVVGAYAPQIIRWV 368 Score = 61.1 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 66/173 (38%) Query: 169 VNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELP 228 + Q + P L L +L++ AG + +P+ + ++ + + P Sbjct: 1 MPQLALPSPAKLATLALLTVLSIAAGFACEAVGVPAAWIFSFLIVFGIYAIFSDRQVSPP 60 Query: 229 EWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDF 288 + + + + I + +S+ LA+C +W L R + Sbjct: 61 KKAMIPSQVIIALLCSSPLTTIDFGTIVSYAGPTAMSLIVTLAVCLLASWLLVRIHRVGP 120 Query: 289 MTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 T+ LAT GG + +++ NAD + Q LR+ I+LT P + + Sbjct: 121 ATSVLATLAGGASAMVMLSRELNADTRFVTLTQYLRVSIIVLTLPGLVTLLGR 173 >UniRef50_C3K9K9 Putative transmembrane protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K9K9_PSEFS Length = 350 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 67/336 (19%), Positives = 137/336 (40%), Gaps = 6/336 (1%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 W + ++ L P ++G ++A ++ G + Q I+ I Sbjct: 8 WLVTLIVGALGGSLASWAGWPLPWVIGSLVAVMLTRCAGGRVPEIPHGRHVGQLIVAVAI 67 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 + T ++ +A + +++ +L+TL+ + +L R+ +P T + P ++ M Sbjct: 68 GCHFTLPVMQQVAAHLGLIVTAVLLTLVLALCSVLILHRW-GVPFGTAFFALMPANSSEM 126 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLL 185 V + + AD +A +R+L + V L A ++W L+ Sbjct: 127 VHLGRQRQADTAFIAAAHSIRLLLILLTVPAVATFGLPAVAAPAPLPVIW-----PWLIF 181 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 + + +A +LP+ P L AV +++ +P WL + IG +G+ Sbjct: 182 ILAMGWLAALGFKQCKLPNPWTFGPFLICAVGVGCNNLSMSIPGWLSGSGQLLIGCALGV 241 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 FD+ RA L ++LL + A + A AW L + + +++ L PG +++ Sbjct: 242 AFDRSFFRRAPGLLAKVLLLLTASVITTALAAWALGAGLGMPWLSLALGMMPGSAPEMSL 301 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 A + L+ AMQ +R+ I + R ++ Sbjct: 302 TAEALGLAVTLVTAMQVIRMLLIQAACLPLYRLLNP 337 >UniRef50_A6VAM6 Membrane protein, putative n=20 Tax=Pseudomonas RepID=A6VAM6_PSEA7 Length = 345 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 127/311 (40%), Gaps = 5/311 (1%) Query: 11 VLSLLLSIGFLAVHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAILGCMIAQNL 69 ++ L V P ++G ++A ++ + + L A Q I+G I + Sbjct: 15 LVGALGGWLASLVGWPLPWMIGSLLAVMLVRCLADLPLAEVPGARKCGQWIVGIGIGLHF 74 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T +++ + + I++ + T LSS + + +R S T + S PGGA+ MV + Sbjct: 75 TPAVIEQVLAHSAIIVFGAVATTLSSVL-AIVFLRRSGEDRATAFFASMPGGASEMVNLG 133 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILL 189 Q +GA + VA Q LR+L V + +LG +Q P L L Sbjct: 134 QRHGAVLSRVAAAQSLRLLLVVLLVPAAFQYLLGGGQPGPHQAA---PVDWRWLALLFPA 190 Query: 190 AVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDK 249 + LR P+ +L P+L A + G + I LP + IG +G F++ Sbjct: 191 GALVALGWQKLRQPNPWLLGPLLLAASVSLGFDLHIGLPAGSSGVGQWLIGSALGCHFNR 250 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 A + + L+ ++ A A L +D + L PGG+ +++ A Sbjct: 251 SFFRSAPAFVSRTLVCTLWMMLAAALTAELLGWLSTLDHQSLMLGMMPGGIAELSLTAEA 310 Query: 310 SNADMALIMAM 320 + L+ A+ Sbjct: 311 LQFSVPLVTAL 321 Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 1/139 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAIL 61 +L L+++G+ + P LLGP++ S+ + + LP + Q ++ Sbjct: 181 WRWLALLFPAGALVALGWQKLRQPNPWLLGPLLLAASVSLGFDLHIGLPAGSSGVGQWLI 240 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + + S + L L +L++A+ LL S+L + G PGG Sbjct: 241 GSALGCHFNRSFFRSAPAFVSRTLVCTLWMMLAAALTAELLGWLSTLDHQSLMLGMMPGG 300 Query: 122 AAAMVAMAQDYGADIRLVA 140 A + A+ + LV Sbjct: 301 IAELSLTAEALQFSVPLVT 319 >UniRef50_Q1GD07 Putative ammonia monooxygenase n=2 Tax=Ruegeria RepID=Q1GD07_SILST Length = 342 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 73/329 (22%), Positives = 142/329 (43%), Gaps = 5/329 (1%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNL 69 +++L ++ F A+ P+A L G A + ++ G+ +++P A +LG I ++ Sbjct: 13 LGVAVLGTLIFEAIGFPSAPLTGSAAAVSLAALFGLPIRMPVWLRTTAFVLLGINIGSSV 72 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWL-LVRYSSLPGNTGAWGSSPGGAAAMVAM 128 T +L + A+ WP+ +AIL V+L S + + L R+ A ++PG + ++A+ Sbjct: 73 TREMLAS-ALAWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAALAAAPGHLSYVLAL 131 Query: 129 AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTIL 188 + G +A +Q +RVLF+ ++ ++ G + V + +L + Sbjct: 132 SLSDGGQTSRIAVVQSIRVLFLTLCVPVLVSLVFGATGVELMPEYVLS---NWHLAALVG 188 Query: 189 LAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFD 248 + +V G V L +P+ +L + A + PE +A++ +G IG F Sbjct: 189 VTLVVGAVFDRLNIPAAYLLAGIFCSAAGHIFAVTPGRPPEAATILAFLVMGTLIGSRFV 248 Query: 249 KQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAA 308 Q L L + + + M + +A +PGG++ +A IA Sbjct: 249 GQRLADLKVDFAAGLWVTGINVTVTLIAIGVAMQVMGLSPALLIVAFAPGGVEAMAAIAV 308 Query: 309 GSNADMALIMAMQTLRLFSILLTGPAIAR 337 D A + A +RL + + P R Sbjct: 309 TLGLDPAFVAAHHVMRLMILTVLMPLALR 337 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 1/159 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 L+ + +AV+ + + PS + A ++ L I +P WL A++ +G Sbjct: 7 FGLVGALGVAVLGTLIFEAIGFPSAPLTGSAAAVSLAALFGL-PIRMPVWLRTTAFVLLG 65 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 IG +++L AL I + +L GL R+M A LA +PG L Sbjct: 66 INIGSSVTREMLASALAWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAALAAAPGHL 125 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 V ++ + I +Q++R+ + L P + + Sbjct: 126 SYVLALSLSDGGQTSRIAVVQSIRVLFLTLCVPVLVSLV 164 >UniRef50_B2A0P8 Putative ammonia monooxygenase-like protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0P8_NATTJ Length = 383 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 128/348 (36%), Gaps = 30/348 (8%) Query: 22 AVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCMIAQNLTGSILTTLAVN 80 + LPAA +LG ++ + G+ L LP+ L Q +LG M+ L + +L Sbjct: 35 KIKLPAAPVLGGVLLIGSLRVMGLQLPFLPQPVVLGLQIMLGVMVGSRLDRQAMKSLKTI 94 Query: 81 WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVA 140 + I + + + G+L+ S L T GSS GG M +A+D GAD V Sbjct: 95 ALPAVLISTWAVTITLVFGFLIAAISGLETTTAILGSSIGGLPEMTVLAEDTGADTVTVV 154 Query: 141 FMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV--------------------- 179 LRVL + + N Sbjct: 155 MFHILRVLSTMLVFPFILSHFSRKSQAQANTTTSTDTTSYANYQQMGTSQSPGDNGKTQN 214 Query: 180 ------SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLA 233 I LLLT+ +A G + L+ +P+G ++ M+ + + P L Sbjct: 215 KYQKLNPIKLLLTLAVAGGFGGLLILVGVPAGGLVGGMVFIIIANYFEFPVEVPPRKALN 274 Query: 234 MAYMAIGWRIGLGFDKQI--LLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 + IG + + L+ + + ++LS+ LA G+A+ + + ++ Sbjct: 275 WFLVGIGLMVSNEVSPETMELILSGELVIPLVLSVTLTLASSFGVAYLINKLTGWEYTLC 334 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 +LA++P G + A D + + RL ++ L P + Sbjct: 335 FLASAPAGFTVMTGFALNEGYDPVRVSLLHLSRLVTLKLVIPFLFMIF 382 Score = 78.8 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 61/146 (41%) Query: 199 LLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRP 258 ++LP+ +L +L L+ L LP+ ++ + +G +G D+Q + Sbjct: 35 KIKLPAAPVLGGVLLIGSLRVMGLQLPFLPQPVVLGLQIMLGVMVGSRLDRQAMKSLKTI 94 Query: 259 LPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIM 318 +L + I + + ++ TA L +S GGL + V+A + AD ++ Sbjct: 95 ALPAVLISTWAVTITLVFGFLIAAISGLETTTAILGSSIGGLPEMTVLAEDTGADTVTVV 154 Query: 319 AMQTLRLFSILLTGPAIARFISTYAP 344 LR+ S +L P I S + Sbjct: 155 MFHILRVLSTMLVFPFILSHFSRKSQ 180 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 66/163 (40%), Gaps = 3/163 (1%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLP-RSAFLAAQAIL 61 ++ + ++ + V +PA L+G M+ II + +++P R A + Sbjct: 221 PIKLLLTLAVAGGFGGLLILVGVPAGGLVGGMVFIIIANYFEFPVEVPPRKALNWFLVGI 280 Query: 62 GCMIAQNLTGSILTTLAVNWPIV--LAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 G M++ ++ + + ++ + + +TL SS V +L+ + + S+P Sbjct: 281 GLMVSNEVSPETMELILSGELVIPLVLSVTLTLASSFGVAYLINKLTGWEYTLCFLASAP 340 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 G M A + G D V+ + R++ + + + Sbjct: 341 AGFTVMTGFALNEGYDPVRVSLLHLSRLVTLKLVIPFLFMIFY 383 >UniRef50_C8S2H9 Putative ammonia monooxygenase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2H9_9RHOB Length = 370 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 69/338 (20%), Positives = 132/338 (39%), Gaps = 9/338 (2%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-----LQLPRSAFLAAQAIL 61 + + + A+ +P L+LG ++ + G + +P ++ Sbjct: 29 AITLAIGTAGGLLGWALSVPLGLMLGSLLTVGSVAALGRRPFGRQVAVPPKLRFFFVPVI 88 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G I T ++L + W L L + + ++ + G+ + R L +T +GS PGG Sbjct: 89 GVAIGGAFTPAVLAQIPGWW-ASLLALCLYIPAAHLCGFWIYRRGGLDRSTAFFGSVPGG 147 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH---IVWFPP 178 V + ++ GAD +++ +Q+LR++ A L + G + + P Sbjct: 148 LIESVTLGEEAGADGQMLVLLQFLRLILTIVAVPLAFMALTGHAVGSASGAKMVGASVPL 207 Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 + + + V G LRLP+ M P++A A+L P W + + Sbjct: 208 GWGDAAMLLAAGVGGFWGGRWLRLPAAIMTGPIIASALLHLAGGTQTVPPAWAVGATQVV 267 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 IG +G F +R L + L + G A + + A+LA +PG Sbjct: 268 IGSVLGARFAGMPPGTLVRAARLALANAAVALVLALGFALAVGPLVGQPVAAAFLAFAPG 327 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 GL +++IA + + A R+ + A+A Sbjct: 328 GLAEMSLIALSLQMSVVYVTAHHVARIVLSVSIARAMA 365 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 1/177 (0%) Query: 167 EAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIE 226 A+ + P ++I L + ++ + L L G++L A+ + + Sbjct: 16 PALPIAALDLPALAITLAIGTAGGLLGWALSVPLGLMLGSLLTVGSVAALGRRPFGRQVA 75 Query: 227 LPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHI 286 +P L IG IG F +L + LL++ + + + R + Sbjct: 76 VPPKLRFFFVPVIGVAIGGAFTPAVLAQIPGWW-ASLLALCLYIPAAHLCGFWIYRRGGL 134 Query: 287 DFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 D TA+ + PGGL + + AD +++ +Q LRL ++ P ++ +A Sbjct: 135 DRSTAFFGSVPGGLIESVTLGEEAGADGQMLVLLQFLRLILTIVAVPLAFMALTGHA 191 >UniRef50_A5G1A0 Putative ammonia monooxygenase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G1A0_ACICJ Length = 354 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 96/296 (32%), Positives = 142/296 (47%), Gaps = 4/296 (1%) Query: 49 LPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSL 108 +PR A LAAQA+LG +I + S L LA + V+ + +TLL S G L+ + Sbjct: 58 VPRGATLAAQAVLGVVIGALVRASTLRALAAHAVPVVIVTFITLLVSIGAGLLMGLRRDV 117 Query: 109 PGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA 168 TGA + GGA+A+VA+A + GADIR+VA +QYLRV FV LV + Sbjct: 118 DATTGALALTTGGASAVVALAAELGADIRMVAVVQYLRVGFVTATMPLVAAFVFHAAGHP 177 Query: 169 VNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQ-LITIEL 227 P L L + A + L R+P+G +L P++ A + + Sbjct: 178 A---AAPRPAGLAGLALVAIAAPAGLVLARLTRMPAGPLLAPLIVAAGITLTGRTGGASV 234 Query: 228 PEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHID 287 P ++ +AY AIGW+ G+ F + L R LP L I + ICAG+ L Sbjct: 235 PFPIVDLAYAAIGWQAGVRFTRGRLAEIGRALPTALALILLVNVICAGLGVLLAHLAGAS 294 Query: 288 FMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 YLAT PGG+ +A + D+ ++A+ LR+ ++ T P AR + A Sbjct: 295 DFDGYLATLPGGIYAALAMAIAARTDVTFVLAVHVLRVVLVMFTMPLFARLLRRRA 350 Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 57/157 (36%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L L V + + +PS + + L L +P A +G Sbjct: 14 WALLALATVALSLLLARVGVPSAALFAALFVATALALAGLAPEGVPRGATLAAQAVLGVV 73 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG L +++ F L + G + +D T LA + GG Sbjct: 74 IGALVRASTLRALAAHAVPVVIVTFITLLVSIGAGLLMGLRRDVDATTGALALTTGGASA 133 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 V +AA AD+ ++ +Q LR+ + T P +A F+ Sbjct: 134 VVALAAELGADIRMVAVVQYLRVGFVTATMPLVAAFV 170 >UniRef50_UPI0000383818 COG3180: Putative ammonia monooxygenase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383818 Length = 224 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 142/220 (64%), Gaps = 1/220 (0%) Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 MVAMA+DYGAD RLVAFMQY+RV V +A L R++ A + LL Sbjct: 1 MVAMAEDYGADPRLVAFMQYVRVAAVVLSASLAARLLTDVGGPAGTGP-TEASWSWLGLL 59 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 T + + L+RLPS ++ PML GAVL + L+ I LP +L AY IGW +G Sbjct: 60 ATAAMTAAGFALAALVRLPSAPLIGPMLLGAVLHASGLLDIVLPAPVLDAAYALIGWYVG 119 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 L F ++ L + LP +L++ A++ +CA AWGLT + I+++TA+LATSPGGLD+VA Sbjct: 120 LRFTRRTLAETVHALPGVLVATAAIIVLCAAWAWGLTGLLPINYLTAFLATSPGGLDSVA 179 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 +IA GS AD++ ++A+QTLRLF +L+TGP +A++I+ AP Sbjct: 180 IIAIGSKADVSFVLAVQTLRLFVVLVTGPTLAKWIARAAP 219 Score = 60.4 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 1/166 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAIL 61 L ++ V LP+A L+GPM+ G + G + + LP AA A++ Sbjct: 55 WLGLLATAAMTAAGFALAALVRLPSAPLIGPMLLGAVLHASGLLDIVLPAPVLDAAYALI 114 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + T L P VL ++ A W L + T +SPGG Sbjct: 115 GWYVGLRFTRRTLAETVHALPGVLVATAAIIVLCAAWAWGLTGLLPINYLTAFLATSPGG 174 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAE 167 ++ +A AD+ V +Q LR+ V + + + Sbjct: 175 LDSVAIIAIGSKADVSFVLAVQTLRLFVVLVTGPTLAKWIARAAPG 220 >UniRef50_B8HRF2 Membrane protein AbrB duplication n=6 Tax=Cyanobacteria RepID=B8HRF2_CYAP4 Length = 365 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 17/338 (5%) Query: 27 AALLLGPMIAGIIFSMRGITLQLP-----RSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 A + ++ S T P RSA +++G I +++ + L + + Sbjct: 24 LAWIFSGLVVAAGLSYLYQTFNQPLPPPNRSARKVGLSLVGLTIGSSISQANLAPITSHL 83 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAF 141 PI + LLS + +G+ R S T + PGG M ++A DY ++ VA Sbjct: 84 PIFALLTFFLLLSGSAIGYCYARLSGTNLLTALLATVPGGVGVMASLAADYDRNVTQVAL 143 Query: 142 MQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWF---PPVSINLLLTILLAVVAGTVGC 198 +Q +RV V L++ ++ G V W P L L +L T+ Sbjct: 144 VQIIRVTAVILGIPLLSGLISGTGINRVVLQREWLSFEPIALGLLCLALLTTGATVTLAG 203 Query: 199 LLRLPSGTMLIPMLAGAVLQ------SGQLITIELPEWLLAMAYMAIGWRIGLGFDKQIL 252 L +P+ L ++ G SG + P + + + +G IG + Q Sbjct: 204 RLGIPAAPFLAAVVVGTSFNPLLTQVSGLDLHFCPPLLVSVLGQILLGLTIGEYWGSQWQ 263 Query: 253 ---LRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 R + LS+ L+ A D++T L T+PGG + ++A Sbjct: 264 TPAQLGRRSISGAFLSVMLTLSAGLLAAAIAHHLTTWDWLTCLLVTAPGGAPEMILVALS 323 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 N + + A +RL +I + P S P + Sbjct: 324 MNHQVETVTAAHLVRLIAINGSLPLWIYLFSRLDPTPA 361 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 63/163 (38%), Gaps = 14/163 (8%) Query: 22 AVHLPAALLLGPMIAG-----IIFSMRGITLQL--PRSAFLAAQAILGCMIAQNL----- 69 + +PAA L ++ G ++ + G+ L P + Q +LG I + Sbjct: 204 RLGIPAAPFLAAVVVGTSFNPLLTQVSGLDLHFCPPLLVSVLGQILLGLTIGEYWGSQWQ 263 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T + L +++ +++TL + + + ++ T ++PGGA M+ +A Sbjct: 264 TPAQLGRRSISG--AFLSVMLTLSAGLLAAAIAHHLTTWDWLTCLLVTAPGGAPEMILVA 321 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH 172 + V +R++ + G+ L + + H Sbjct: 322 LSMNHQVETVTAAHLVRLIAINGSLPLWIYLFSRLDPTPATAH 364 >UniRef50_B5JBC7 Putative ammonia monooxygenase superfamily n=2 Tax=Octadecabacter antarcticus RepID=B5JBC7_9RHOB Length = 336 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 136/333 (40%), Gaps = 1/333 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 M ++S L F+A+ LP LLGP++ +I ++ G+ LQ + + ILG + Sbjct: 4 LMTLLISGLGVAAFMALGLPLPWLLGPLLGCLIAALFGVRLQGAPKSSQVMRTILGVAVG 63 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 +T ++ + + + + + A+ L + T + S PGG M+ Sbjct: 64 ATITPALFAQMGTLIWTLALMPPLVICVGAVGYPLFRKGFGFDHPTAFYASMPGGLQDML 123 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT 186 ++ G D+R ++ + RVL V + + + P LL+ Sbjct: 124 LFGEEAGGDVRALSLIHATRVLIVVMVLPFMFAYLYDVDMNQPVGEPFLSVP-WTQLLIL 182 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 ++ + L L ++L P+ A L I P + A IG+ IG+ Sbjct: 183 AAAGIIGWRIAAALGLFGASLLGPLFFTAALSLVGFIQHRPPAEAIQAAQFFIGFTIGVK 242 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 + + ++ L I A A + R + F + LA SPGG +A++ Sbjct: 243 YAGISWRELRVDVTAGVVFSVLSLCISAVFAAVVIRLGWLPFTESVLAFSPGGQAEMAIV 302 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 A + AD A+++A +R+ +++ P + R+ Sbjct: 303 ALVAGADAAVVVAHHLVRIVFVIIGAPLVNRWF 335 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 1/162 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQA 59 +P Q +L ++ A+ L A LLGP+ S+ G + P A AAQ Sbjct: 174 VPWTQLLILAAAGIIGWRIAAALGLFGASLLGPLFFTAALSLVGFIQHRPPAEAIQAAQF 233 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +G I G L V+ + +++L SA+ +++R LP SP Sbjct: 234 FIGFTIGVKYAGISWRELRVDVTAGVVFSVLSLCISAVFAAVVIRLGWLPFTESVLAFSP 293 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 GG A M +A GAD +V +R++FV A LV R Sbjct: 294 GGQAEMAIVALVAGADAAVVVAHHLVRIVFVIIGAPLVNRWF 335 Score = 41.9 bits (97), Expect = 0.037, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 63/159 (39%), Gaps = 1/159 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 + LL+T+L++ + L LP +L P+L + + P+ M +G Sbjct: 1 MALLMTLLISGLGVAAFMALGLPLPWLLGPLLGCLIAALFGVRLQGAPKSSQVM-RTILG 59 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 +G + + + + L ++ + A + D TA+ A+ PGGL Sbjct: 60 VAVGATITPALFAQMGTLIWTLALMPPLVICVGAVGYPLFRKGFGFDHPTAFYASMPGGL 119 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + + + D+ + + R+ +++ P + ++ Sbjct: 120 QDMLLFGEEAGGDVRALSLIHATRVLIVVMVLPFMFAYL 158 >UniRef50_D1Y8H5 Membrane protein AbrB duplication n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8H5_9BACT Length = 353 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 76/343 (22%), Positives = 131/343 (38%), Gaps = 9/343 (2%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL-GCMI 65 L + G + PAA +LG + + ++ G+ L ++ +L G ++ Sbjct: 11 AALFAVGYAGFRGAKKMGWPAAAMLGSLFLLGLLNLSGLRLPFYQAPVSFVSKVLSGVIL 70 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSS--LPGNTGAWGSSPGGAA 123 Q + + + + V +++S G LL + L T SS GG A Sbjct: 71 GQRIDRHMASAVRKMLLPVSLASFWMVMASIATGLLLFAVAGGRLSLMTCLASSSAGGIA 130 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW------FP 177 M A GAD+ +VAF Q +R++ + T + + AV Sbjct: 131 EMSIFAMSAGADVGIVAFFQSVRIIVLYATLPFSTGWLARRASGAVLPKAPAPDAETRVS 190 Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 + + + R PS M+ M V+ + LP L + A + Sbjct: 191 FTPGEIARFAAVTGALALLFEAARFPSAYMIGAMCGAGVMNLRSGKVMTLPPRLRSAAQI 250 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 + I +G + + + S+ + A +AW + R D MT+ LAT P Sbjct: 251 CLSMTISVGLSPRTIHLVRELFFPLAFSVALIQAFSFLLAWIMHRLTRWDVMTSVLATCP 310 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 GGL VA A +AD ++ +R+ SI++ P IAR + Sbjct: 311 GGLSQVAFFAEDLHADPLIVGVFHAVRMISIVVCVPLIARLFA 353 Score = 58.0 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 61/167 (36%), Gaps = 2/167 (1%) Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 S + + P+ ML + +L L + ++ + Sbjct: 7 SAGTAALFAVGYAGFRGAKKMGWPAAAMLGSLFLLGLLNLSGLRLPFYQAPVSFVSKVLS 66 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMH--IDFMTAYLATSP 297 G +G D+ + + L + L+ F ++ L + MT ++S Sbjct: 67 GVILGQRIDRHMASAVRKMLLPVSLASFWMVMASIATGLLLFAVAGGRLSLMTCLASSSA 126 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 GG+ +++ A + AD+ ++ Q++R+ + T P +++ A Sbjct: 127 GGIAEMSIFAMSAGADVGIVAFFQSVRIIVLYATLPFSTGWLARRAS 173 >UniRef50_C8NRG7 Transport protein n=13 Tax=Corynebacterium RepID=C8NRG7_COREF Length = 353 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 99/325 (30%), Positives = 151/325 (46%), Gaps = 14/325 (4%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLL-GPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 ++ LS+ + F V++PA+ +L G ++AG + G L L R + ++I+ + A Sbjct: 2 IVAPLSVAVGWLFTLVNIPASWILAGIIVAGACALVTGEDLPLTRGVHIFGRSIIAVLAA 61 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVR-YSSLPGNTGAWGSSPGGAAAM 125 L + L L I T+ I G LL R + TG GGA+ M Sbjct: 62 LPLISAPGQELLRYLAPGLVISFFTVTVGIIGGLLLSRSRPEILPETGVLSMLAGGASVM 121 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN--- 182 +A+D GAD R VA QYLR+L V+ + LVT A + + Sbjct: 122 PVLAKDLGADFRYVALSQYLRLLVVSVSLPLVTTFFAPYGAGSDQGTESPLAVFGLGEFG 181 Query: 183 -------LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT--IELPEWLLA 233 L + L+ +V +G LLRLPS +L P++ L + +E P Sbjct: 182 TSTSVVSLAVLGLIILVGEPLGRLLRLPSPAILGPLVLTVTLSLVFPLEVNLEPPSLFKI 241 Query: 234 MAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 +A++AIGW G G + L R LP +L I ALLA+CA A L ++ I + AYL Sbjct: 242 LAFLAIGWMCGGGLNMTALKAFSRQLPATILFIVALLAVCAAAAVLLVFWLDISYFEAYL 301 Query: 294 ATSPGGLDTVAVIAAGSNADMALIM 318 ATSPG L+TV +++ +A ++ Sbjct: 302 ATSPGALETVLALSSEGDAGPVVVT 326 Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 3/139 (2%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM---RGITLQLPRSAFLAAQAILGC 63 +L ++ L+ + LP+ +LGP++ + S+ + L+ P + A +G Sbjct: 190 AVLGLIILVGEPLGRLLRLPSPAILGPLVLTVTLSLVFPLEVNLEPPSLFKILAFLAIGW 249 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 M L + L + P + ++ L A LLV + + +SPG Sbjct: 250 MCGGGLNMTALKAFSRQLPATILFIVALLAVCAAAAVLLVFWLDISYFEAYLATSPGALE 309 Query: 124 AMVAMAQDYGADIRLVAFM 142 ++A++ + A +V Sbjct: 310 TVLALSSEGDAGPVVVTIQ 328 >UniRef50_B9Y4Q0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4Q0_9FIRM Length = 352 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 68/345 (19%), Positives = 135/345 (39%), Gaps = 13/345 (3%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 + W + + + LPA +LG M+A + ++ LP + + AQAI G Sbjct: 1 MNWVLTLLAGVAGWQLAARWKLPAPAMLGSMLAVGLTNILFDYAALPMAVKVFAQAISGA 60 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I + + + L + ++ +++ +VG + + T GG Sbjct: 61 FIGMQIGRKDVARMRGLIVPFLLLAVMLTVNTFVVGIAIQKLCGWDWITALLSCVAGGVT 120 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAV------------NQ 171 + +A + AD+ VA MQ R++ V + + + Sbjct: 121 DISLIAMEMDADVGTVAMMQTARLVGVLLFFPYWIQFVTRHEPKTAPVTEEKPLDAAHTP 180 Query: 172 HIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 S ++ T+LL++ G +G LP+ +M+ PM+A A L + +P + Sbjct: 181 LDRLISTRSSRIVFTLLLSIGLGYLGNASGLPAASMVFPMIAVAALNCTTSV-CAVPLAI 239 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 +A + G +G+ L + L + + + + R +D +A Sbjct: 240 KNIAQLLAGSLVGVSITAATFSSLSSTLVPVGLLLLSYWTVNGLYSGICKRTKLLDLKSA 299 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 A++PGG +++IAA AD++ I +Q LR ++ P + Sbjct: 300 MFASAPGGATDMSLIAADLGADLSQIALIQVLRAAYVVAVMPPLI 344 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 1/165 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 +N +LT+L V + +LP+ ML MLA + LP + A G Sbjct: 1 MNWVLTLLAGVAGWQLAARWKLPAPAMLGSMLAVGLTNI-LFDYAALPMAVKVFAQAISG 59 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 IG+ ++ + R + LL L + + + D++TA L+ GG+ Sbjct: 60 AFIGMQIGRKDVARMRGLIVPFLLLAVMLTVNTFVVGIAIQKLCGWDWITALLSCVAGGV 119 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 +++IA +AD+ + MQT RL +LL P +F++ + PK Sbjct: 120 TDISLIAMEMDADVGTVAMMQTARLVGVLLFFPYWIQFVTRHEPK 164 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 69/154 (44%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQN 68 +LS+ L A LPAA ++ PMIA + +P + AQ + G ++ + Sbjct: 195 TLLLSIGLGYLGNASGLPAASMVFPMIAVAALNCTTSVCAVPLAIKNIAQLLAGSLVGVS 254 Query: 69 LTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAM 128 +T + ++L+ V +LL + + + R L + + S+PGGA M + Sbjct: 255 ITAATFSSLSSTLVPVGLLLLSYWTVNGLYSGICKRTKLLDLKSAMFASAPGGATDMSLI 314 Query: 129 AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 A D GAD+ +A +Q LR +V + + Sbjct: 315 AADLGADLSQIALIQVLRAAYVVAVMPPLILGFI 348 >UniRef50_B9KW55 Ammonia monooxygenase n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KW55_RHOSK Length = 341 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 77/315 (24%), Positives = 123/315 (39%), Gaps = 9/315 (2%) Query: 23 VHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWP 82 +P +LG ++ I+S L R A A Q +LGC A LT ++L +AV P Sbjct: 30 FGVPIGWVLGALLGAAIWSNSTGHGGLGRHARRAGQLVLGCATASILTPALLAEMAVALP 89 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 + +V +L + R + + T P G A M +AQD GA + +V Sbjct: 90 AMALAAVVAILVALGFAPAFSRLADVDRKTALLSVLPAGLAEMAGLAQDRGARVEVVTLA 149 Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRL 202 +RV + ++ A + + L+ + L++V Sbjct: 150 HTIRVTALVLTLPVLV--------GAARRPLPPAEGDLRVTLVCLGLSLVLAWAMNRAGF 201 Query: 203 PSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQI 262 + +++P++ GA L LP W + A +AIG +G R R L Sbjct: 202 LNPWIVLPVIVGAALTFAGFRLAALPPWAIVAAQVAIGGSLGSRLQVDRFARMPRVLGAA 261 Query: 263 LLSIFALLAICAG-MAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQ 321 LLS L A A +A ID T LA +PGGL + A A + +++ Q Sbjct: 262 LLSTLLLYAGTALVLAPVCWWIYDIDLATFALALAPGGLAEMLAAAKAIGAAVPMVLGFQ 321 Query: 322 TLRLFSILLTGPAIA 336 LR L+ + Sbjct: 322 LLRSLVTNLSAAWLL 336 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 56/149 (37%), Gaps = 1/149 (0%) Query: 200 LRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPL 259 +P G +L +L A+ + L + +G +L L Sbjct: 30 FGVPIGWVLGALLGAAIWSNSTGHGG-LGRHARRAGQLVLGCATASILTPALLAEMAVAL 88 Query: 260 PQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMA 319 P + L+ + + G A +R +D TA L+ P GL +A +A A + ++ Sbjct: 89 PAMALAAVVAILVALGFAPAFSRLADVDRKTALLSVLPAGLAEMAGLAQDRGARVEVVTL 148 Query: 320 MQTLRLFSILLTGPAIARFISTYAPKRSA 348 T+R+ +++LT P + P Sbjct: 149 AHTIRVTALVLTLPVLVGAARRPLPPAEG 177 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 2/155 (1%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCMI 65 + LSL+L+ ++ P+I G + G L LP A +AAQ +G + Sbjct: 183 LVCLGLSLVLAWAMNRAGFLNPWIVLPVIVGAALTFAGFRLAALPPWAIVAAQVAIGGSL 242 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLL-SSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 L + L L+ ++ ++ + + T A +PGG A Sbjct: 243 GSRLQVDRFARMPRVLGAALLSTLLLYAGTALVLAPVCWWIYDIDLATFALALAPGGLAE 302 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTR 159 M+A A+ GA + +V Q LR L +A + Sbjct: 303 MLAAAKAIGAAVPMVLGFQLLRSLVTNLSAAWLLG 337 >UniRef50_C2LN52 Membrane-associated ammonia monooxygenase n=8 Tax=Enterobacteriaceae RepID=C2LN52_PROMI Length = 346 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 131/346 (37%), Gaps = 3/346 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 M L+ + L+ LP AL+ GP++ II L +P+ Q Sbjct: 1 MSFLKKLPGILFCALIGGLLTLSGLPMALMFGPIVVVIIAYRFKWQLSVPKHTLTFIQLT 60 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG + L + +++ +++ + + R+ G+ PG Sbjct: 61 LGTSVGLMFNQVHLGSADNLVLLLIILVICLAIQFVVSFLWFHRHIGWTKEEAMLGAVPG 120 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 AA++A+ + + +R++ + A + E + S Sbjct: 121 AMAAILALTDHTKTPPQKIVISHTIRLIVLIIMAGFIVGSDKATLTEFTLPEMTLLS--S 178 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 + LLL + L +V+G + + P+ ML + + ++QS I P L ++ + IG Sbjct: 179 MWLLLIVALGLVSGLLLQKIHFPAPFMLTSLGSAILVQSFVSEPIAFPMLLNELSMVLIG 238 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 IG F ++ + + + + +A + T LA +PG + Sbjct: 239 MNIGAHFVVFPFASLIKNAFSSVQVVIINVILTVIVALSAAYLTGAPWTTLVLAWAPGSM 298 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + + A N D A +M+ LR+ I+ + P+IA F S KR Sbjct: 299 EAMTFAAITMNVDAAFVMSNHILRML-IIQSIPSIALFYSERKQKR 343 >UniRef50_B7RQ37 Membrane protein AbrB duplication n=4 Tax=Rhodobacteraceae RepID=B7RQ37_9RHOB Length = 347 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 66/330 (20%), Positives = 132/330 (40%), Gaps = 2/330 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 + + L ++ AV P LL+GP + + + G+ + + S A ++G + Sbjct: 14 ALTVCVGTLGALLGWAVGAPIYLLVGPAVLVSLAGLAGLKMGISLSLRNACFVVIGLAVG 73 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 S L + + +L++ + WLL R+ + ++PG + ++ Sbjct: 74 AGFDRSALDAMIRWPLAFVVVLVMIWVMMVFSRWLLSRFFGFDRRSALLAAAPGHLSFVL 133 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT 186 AMA + G ++ V+ Q +R+L + V M D ++ ++ Sbjct: 134 AMAAEAGDNVVRVSTTQSVRLLSLTLVVPFVALSMGVDLGGSIVPQGALMGAGLT--VVL 191 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 + L V AG + L +P+ ++ PML ++ + LP WL+ AY+ +G IG Sbjct: 192 LALGVGAGLLLGRLNVPAPMLIGPMLVSSLGHLTETAPGVLPMWLVLPAYLVLGALIGTR 251 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 F + + L L + + A +T + +A +PGG +T+ + Sbjct: 252 FSGVSMDDLSKGLAAGLAVTGVAVGLALLAAVPVTLALGAPLAHVLVAFAPGGFETMIAM 311 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIA 336 A I A +R+F + + P + Sbjct: 312 GAVLGVVPGFIAACHMMRIFVLSVLLPVML 341 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 3/162 (1%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT---IELPEWLLAM 234 P + L+T L V GT+G LL G + ++ AVL S + + + L Sbjct: 4 PKPPSDLMTTALTVCVGTLGALLGWAVGAPIYLLVGPAVLVSLAGLAGLKMGISLSLRNA 63 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 ++ IG +G GFD+ L +R ++ + + + W L+RF D +A LA Sbjct: 64 CFVVIGLAVGAGFDRSALDAMIRWPLAFVVVLVMIWVMMVFSRWLLSRFFGFDRRSALLA 123 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 +PG L V +AA + ++ + Q++RL S+ L P +A Sbjct: 124 AAPGHLSFVLAMAAEAGDNVVRVSTTQSVRLLSLTLVVPFVA 165 >UniRef50_B1VGV1 Putative membrane protein n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VGV1_CORU7 Length = 333 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 35/305 (11%) Query: 76 TLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGAD 135 +A L+VTL+ A WLL R + + G TG + GGA+ MV +A+D AD Sbjct: 14 QVASYLAPAALSLVVTLVVCAFGAWLLHRVNGVDGATGLLATLAGGASGMVLIARDVRAD 73 Query: 136 IRLVAFMQYLRVLFVAGAAVLVTRM-----------------------------MLGDNA 166 ++ V QYLR+ + + G A Sbjct: 74 VQFVTLTQYLRLTVIVFTLPGLVAWLSTYSDAPGPDSVGPGSAGEAAGAVDPSLWDGVAA 133 Query: 167 EAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT-I 225 A + + V L + +L+ ++ L ++PS +++ M + + Sbjct: 134 AAGSFWRTPWQGVLGALAVGLLVWLIVKATAPLFKIPSPYLIVSMAVVVAAIAAGVPQEF 193 Query: 226 ELPEWL-LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFM 284 LPE L + +AY IG + G K L + LP +L +F ++A W + Sbjct: 194 VLPEGLAVNLAYAIIGVQAGGTLTKGALRQFSAALPMLLGVLFLMVASSLATGWFIAWAS 253 Query: 285 HIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILL---TGPAIARFIST 341 D + AYLAT PGG+ V A S +D L+ +Q LR+ +L+ P + ++ Sbjct: 254 DFDILDAYLATVPGGVYAVLAFAHDSGSDP-LVTVVQVLRVLLMLIAGAFAPTVIDWLRR 312 Query: 342 YAPKR 346 +P R Sbjct: 313 TSPTR 317 Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 1/109 (0%) Query: 53 AFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNT 112 A A AI+G LT L + P++L +L + + SS GW + S Sbjct: 200 AVNLAYAIIGVQAGGTLTKGALRQFSAALPMLLGVLFLMVASSLATGWFIAWASDFDILD 259 Query: 113 GAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 + PGG A++A A D G+D LV +Q LRVL + A ++ Sbjct: 260 AYLATVPGGVYAVLAFAHDSGSD-PLVTVVQVLRVLLMLIAGAFAPTVI 307 >UniRef50_Q8KVY0 RC210 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KVY0_9RHOB Length = 333 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 113/278 (40%), Gaps = 2/278 (0%) Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T + +A+ P+++ +VT + +++V L R + + + P MA Sbjct: 53 TFDLSPFVALLAPLLVGAAIVTAILASLVALLTARMAPMGLAQAFLATFPTSPVEAAVMA 112 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILL 189 + D + Q +R+ V L + G + F L T L Sbjct: 113 ERLDCDPAPIVLAQTMRIAAVVIFVPLSIYALDGWPDRSGLIRGGTFDLWGNGFLAT--L 170 Query: 190 AVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDK 249 A+ + +LR+ + L P+ A + P +L+ A + +G +G F + Sbjct: 171 AIAGAVLFKVLRISNPYFLGPLTFSAAAAAMDFHPTAFPPLMLSAAQVVLGTWLGSTFRR 230 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 ++L R + S LLAI + A G+ + +D+ L +PGG+ +A+ A Sbjct: 231 ELLRNGRRLIAASAFSTLLLLAIVSAFAVGVAQISGLDWEVLVLGLAPGGVTEMALTAKF 290 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 D+AL+ A Q R+F + P I + ++ + +R Sbjct: 291 LGVDLALVTAFQLTRIFIFMPNIPWIVQLVARFEVRRH 328 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 1/157 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIA-GIIFSMRGITLQLPRSAFLAAQAILGCMI 65 G L L++ ++ F + + LGP+ +M P AAQ +LG + Sbjct: 165 GFLATLAIAGAVLFKVLRISNPYFLGPLTFSAAAAAMDFHPTAFPPLMLSAAQVVLGTWL 224 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 +L L+ L + + + S L G +PGG M Sbjct: 225 GSTFRRELLRNGRRLIAASAFSTLLLLAIVSAFAVGVAQISGLDWEVLVLGLAPGGVTEM 284 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 A+ G D+ LV Q R+ + +++ Sbjct: 285 ALTAKFLGVDLALVTAFQLTRIFIFMPNIPWIVQLVA 321 >UniRef50_A8MLZ6 Conserved hypothetical membrane-spanning protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MLZ6_ALKOO Length = 354 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 131/342 (38%), Gaps = 10/342 (2%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 + ++ + + + V +PA L++G ++ F++ +P+ L Q + G I Sbjct: 8 LITILVGSMFGVAAVKVKIPAGLMVGAIVGVAAFNIFFDLAYMPKQTTLVVQIVAGAFIG 67 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 ++ S L L +L ++ + G+L+ S L T PGG + Sbjct: 68 CSMEKSDLRRLPKIIKPAAIMLSSLIILNLTAGFLIYFLSPLDLVTSLMSVVPGGVSDTP 127 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG---------DNAEAVNQHIVWFP 177 +A GAD VA MQ +R + G + + + + + Sbjct: 128 IIAAVMGADGPKVAVMQLVRQILGIGVFPALIFVYDHKCRKHGIENERGAFIEKRQKSKT 187 Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 L T+++A + G +G + + +GT +L+ +L+ +P+WL A + Sbjct: 188 KSWRAFLCTVVVAALFGILGKISGITAGTFTFAILSVLILKLVFDFAY-IPKWLKKCAQV 246 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 G +G +L L + + + A C +++ A L T+P Sbjct: 247 LSGSYLGSTIVLNDVLTLRYLLVPLCIIVLGYAANCFVTGKIISKTCGFTRKEAMLITTP 306 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 G +A+I+ + I+ +Q LR ++ P I I Sbjct: 307 AGASDMALISNDLGVENTDIIILQVLRAVIVMSLFPQIINLI 348 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 1/154 (0%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LL+TIL+ + G +++P+G M+ ++ A + +P+ + + G Sbjct: 7 LLITILVGSMFGVAAVKVKIPAGLMVGAIVGVAAFNIFFDLAY-MPKQTTLVVQIVAGAF 65 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG +K L R + + + + +L+ + + + +D +T+ ++ PGG+ Sbjct: 66 IGCSMEKSDLRRLPKIIKPAAIMLSSLIILNLTAGFLIYFLSPLDLVTSLMSVVPGGVSD 125 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 +IAA AD + MQ +R + PA+ Sbjct: 126 TPIIAAVMGADGPKVAVMQLVRQILGIGVFPALI 159 Score = 58.4 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 60/160 (37%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 + V++ L I + A +++ +I + +P+ AQ + G Sbjct: 190 WRAFLCTVVVAALFGILGKISGITAGTFTFAILSVLILKLVFDFAYIPKWLKKCAQVLSG 249 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + + + + TL + I+L + + G ++ + ++P GA Sbjct: 250 SYLGSTIVLNDVLTLRYLLVPLCIIVLGYAANCFVTGKIISKTCGFTRKEAMLITTPAGA 309 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 + M ++ D G + + +Q LR + V + ++L Sbjct: 310 SDMALISNDLGVENTDIIILQVLRAVIVMSLFPQIINLIL 349 >UniRef50_Q5LXH6 Membrane protein, putative n=2 Tax=root RepID=Q5LXH6_SILPO Length = 354 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 129/345 (37%), Gaps = 2/345 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 + + + L ++ VH+P ALL GP +A + + G++L + A ++G Sbjct: 8 PRRDLLTLAVGALGALIATLVHMPMALLAGPAVAVSLAGLCGLSLHISPRLRDAGFLVIG 67 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I + + + + +TL + WL+ R + + ++PG Sbjct: 68 LSIGSLVGPESIEAMMRWPVAFGLLAGLTLATPWAGRWLIPRLLPIDRDEAFLAAAPGHL 127 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 + ++A+A + + +R++ + L + + + Q P I Sbjct: 128 SLVIALADSLQLSLTRPVVLASIRLMALTLLVPLAASLAGIEIGPGLPQLAAVTPWAWI- 186 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L I+ A++ V L+LP+ ++ ++ A LP W + + +G Sbjct: 187 -LGQIVAALLLAPVLKALKLPAHVLIAGIVVAATTHLAGWTAGGLPGWAAQASLILMGAM 245 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG F + L L + + A + + L SPGGL+T Sbjct: 246 IGSRFGGMGWRELRQSLTAGLAIVVLTTGLATLAALPAAYLSGLPLLDVLLGFSPGGLET 305 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 + +++A AD + + A RL + + A ++ +S Sbjct: 306 MIILSAALGADPSFVAAAHLFRLSVLAVVLTLYATDVARRGQGKS 350 Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 1/159 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAI 60 P V +LLL+ A+ LPA +L+ ++ + G T LP A A+ + Sbjct: 182 PWAWILGQIVAALLLAPVLKALKLPAHVLIAGIVVAATTHLAGWTAGGLPGWAAQASLIL 241 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G MI G L + LAI+++T + + S LP G SPG Sbjct: 242 MGAMIGSRFGGMGWRELRQSLTAGLAIVVLTTGLATLAALPAAYLSGLPLLDVLLGFSPG 301 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTR 159 G M+ ++ GAD VA R+ +A L Sbjct: 302 GLETMIILSAALGADPSFVAAAHLFRLSVLAVVLTLYAT 340 >UniRef50_Q0FKP2 Putative uncharacterized protein n=2 Tax=Roseovarius RepID=Q0FKP2_9RHOB Length = 341 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 125/313 (39%), Gaps = 3/313 (0%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIV 84 +PA L+G M+A + + G + +P A A ++G + + S+L L + Sbjct: 29 VPAGALIGAMLAVALMAGLGHAVTVPVIARDLAFLVIGISLGAGIDASVLPHLPGWSISL 88 Query: 85 LAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQY 144 L + + + + A +LL R ++ T S+PG + VA+A + D V +Q Sbjct: 89 LGLAVALVATMAASTFLLQRVFAVDWQTAVLASAPGTMSNAVAIAVEGKGDASGVMILQL 148 Query: 145 LRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPS 204 +R++ + + ++ +A A + V P+ L ++ + VG + + Sbjct: 149 MRLVILVTLVPPLAAVLGAPDAAAGGERPVM--PLLALAGLLVVGLPLGRFVGRR-GISA 205 Query: 205 GTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILL 264 +L +L V LI P W++ + + G +G K L AL+ + Sbjct: 206 ACLLTGILLSGVGHGAGLIHGAAPSWMVFLGFTMTGAVLGTRISKVDLRSALKLAGAGTV 265 Query: 265 SIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLR 324 + L + A +A +PGG++ +A I D A + A R Sbjct: 266 VVGMALGMALVFALITQALTGFPLGQILIAYAPGGVEAMAAIGLALGYDPAFVAAHHFAR 325 Query: 325 LFSILLTGPAIAR 337 + +L PA R Sbjct: 326 ILILLALVPAFLR 338 >UniRef50_C9YG31 Protein abrB n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YG31_9BURK Length = 334 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 82/222 (36%), Positives = 121/222 (54%), Gaps = 6/222 (2%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P L L + S L S FL + +PA +LLG M+AG++ + + I +Q+P F Q+++ Sbjct: 10 PRLHGPALLLCSALASAAFLLMGVPAGMLLGCMLAGVLLATQDINVQVPAPLFAIGQSVI 69 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 C++A +L +L +A WP+ L I + +SA++G+ L+R LPG+T WG +PG Sbjct: 70 ACLMAHSLHFEVLQRVAGEWPLFLGIAFSVMAASALLGYWLMRSGLLPGSTAIWGLAPGA 129 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+AMV MA D+GAD RLVAFMQYLRV V A LV G + + Sbjct: 130 ASAMVLMAGDFGADTRLVAFMQYLRVALVTAIASLVAHFAAGASPGHAAAAWDVQLVHWL 189 Query: 182 NL------LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVL 217 +L LT+ L + A +G L P G +LIPM+ + Sbjct: 190 HLQSPLHAGLTLTLVLAAAWLGRTLTFPGGPLLIPMVLALAM 231 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 1/164 (0%) Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 +L + +A L+ +P+G +L MLAG +L + Q I +++P L A+ I + Sbjct: 16 ALLLCSALASAAFLLMGVPAGMLLGCMLAGVLL-ATQDINVQVPAPLFAIGQSVIACLMA 74 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 ++L R P L F+++A A + + L R + TA +PG + Sbjct: 75 HSLHFEVLQRVAGEWPLFLGIAFSVMAASALLGYWLMRSGLLPGSTAIWGLAPGAASAMV 134 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 ++A AD L+ MQ LR+ + +A F + +P +A Sbjct: 135 LMAGDFGADTRLVAFMQYLRVALVTAIASLVAHFAAGASPGHAA 178 >UniRef50_Q1I8F5 Putative ammonia monooxygenase n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I8F5_PSEE4 Length = 338 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 140/344 (40%), Gaps = 7/344 (2%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 +Q M ++ L + G LP L+G + + G+ +++P Q +LG Sbjct: 1 MQCLMPIPIAALGAWGGYLSGLPLGTLIGAVCTVTLAGKLGLNMRMPLPFVATVQLLLGL 60 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + +T S+L L+ + I+ +L+ L + L RY G+ PG A Sbjct: 61 SVGSTVTASMLGELS-DISILAGLLVCMGLQILVGYNWLRRYERWSHLESLLGAMPGAMA 119 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 A++ ++ + G +AF+ V A+L+ ++ + + L Sbjct: 120 AVMTVSGEQGPSSGRIAFVH-----IVRLLALLLVVTLIAGGQGSGATASNGNLDDYLRL 174 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQL-ITIELPEWLLAMAYMAIGWR 242 + L+AV+AG + L +P+ ML ++ A + G ++++P + A + +G Sbjct: 175 VPPALMAVIAGYLLERLEVPAPYMLTGVMCAAAVNIGYPEASLQVPAPVATAALILLGGL 234 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG+ L LR + L+ L +A +R F+ +++ PGG++ Sbjct: 235 IGIRLRDITLRDVLRHVRAGLVVTSLTLCCTVLVALAASRLTDRPFLALFMSWVPGGVEV 294 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + A D A +M +R+ I L + R + P R Sbjct: 295 MTAAALLLKLDPAFVMLNHVVRMTLIHLAPAVLPRRLLREQPTR 338 >UniRef50_Q399M7 Putative ammonia monooxygenase n=2 Tax=Proteobacteria RepID=Q399M7_BURS3 Length = 347 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 121/323 (37%), Gaps = 4/323 (1%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 + + +P LLLG ++A I + R R Q +LG Sbjct: 4 LAYLACLTAVGLVLRVAGVPHGLLLGAILAASIATSRFGFAPRLRFGLEFVQIVLGTATG 63 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 + P + +L+ + L R S PG AA+ Sbjct: 64 LLFRSWDTQMVVSIVPSLGVLLVCLATQIVVGSLWLSRVSGWNRADSLLAVYPGALAAVF 123 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT 186 + + A V + +R+L + G +A + +++ L+ Sbjct: 124 DLLESERA-SAKVIVVHLVRLLSITVLVSCFIPAQAGAPQQAAVAALPVDTWLALAALVA 182 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAV-LQSGQLITIELPEWLLAMAYMAIGWRIGL 245 + + +G L +P+ M+ ++ V +++G L +E+P W + A + +G IG Sbjct: 183 LCVLAGRALLG--LGVPAPFMITAIVLTGVFVRAGWLHDVEVPAWCVDAASVILGALIGA 240 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 F + L LR L I +L + AWG+ R + +L+ +PG ++T+ + Sbjct: 241 QFRQITLADGLRYGRTGLACIALMLTVAGAFAWGMARLSGYGVLPLWLSYAPGAIETITI 300 Query: 306 IAAGSNADMALIMAMQTLRLFSI 328 +A G ++ +++ RL + Sbjct: 301 VAYGGGLNVVFVLSHHLTRLVVL 323 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 2/138 (1%) Query: 19 GFLAVHLPAALLLGPMIAGIIFSMRG--ITLQLPRSAFLAAQAILGCMIAQNLTGSILTT 76 L + +PA ++ ++ +F G +++P AA ILG +I L Sbjct: 190 ALLGLGVPAPFMITAIVLTGVFVRAGWLHDVEVPAWCVDAASVILGALIGAQFRQITLAD 249 Query: 77 LAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADI 136 LA + + L + W + R S +PG + +A G ++ Sbjct: 250 GLRYGRTGLACIALMLTVAGAFAWGMARLSGYGVLPLWLSYAPGAIETITIVAYGGGLNV 309 Query: 137 RLVAFMQYLRVLFVAGAA 154 V R++ + A Sbjct: 310 VFVLSHHLTRLVVLHFAP 327 >UniRef50_A6D2G3 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D2G3_9VIBR Length = 339 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 128/331 (38%), Gaps = 8/331 (2%) Query: 9 LCVLSLLLSIGFLAVHLPAALLL-GPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQ 67 ++ L+ S+ + +P L + + + ++LP + Q ILG I Sbjct: 6 TILVGLIGSLLGGVLPIPLGELFSAALFVVMYLRLTKTDVRLPSAILTTIQIILGLSIGI 65 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 + S L + + P+ + ++L L + + + L + G+ PG AA++ Sbjct: 66 TVHTSELID-SFSLPLFMGLILCMLSQTTVNFFWLYKQEKWTPFESLLGAIPGALAAILV 124 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTI 187 ++++ + F +R+L + A +V G + + + P L+L Sbjct: 125 ISEEQEKPSPKIIFSHSIRLLLLVVLAGIVATTGEGTSQLSQTVSLAQIP----YLILLT 180 Query: 188 LLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQS-GQLITIELPEWLLAMAYMAIGWRIGLG 246 +L+ V G + + +P+ +L ++ A+ + + + +PE + A +G IG Sbjct: 181 VLSFVFGKIVGKIGIPAPYLLTSLIVAAMFNAQFSSLHLVVPELFIMFATAILGVLIGTR 240 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 L A+ + + + A + D+ LA PG ++ + + Sbjct: 241 LAPTSLKDAVEYSRAGFIVTALGVTVTVVYALIFSYLTSTDWEVLLLAWVPGSVEAMTAV 300 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 A + A + +RL +L P + + Sbjct: 301 ALLLGLEPAFVAINHVMRL-MMLYMMPVVLK 330 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 2/153 (1%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS--MRGITLQLPRSAFLAAQAILGCM 64 +L VLS + + +PA LL +I +F+ + L +P + A AILG + Sbjct: 177 ILLTVLSFVFGKIVGKIGIPAPYLLTSLIVAAMFNAQFSSLHLVVPELFIMFATAILGVL 236 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 I L + L + + + + + + +S PG A Sbjct: 237 IGTRLAPTSLKDAVEYSRAGFIVTALGVTVTVVYALIFSYLTSTDWEVLLLAWVPGSVEA 296 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLV 157 M A+A G + VA +R++ + V++ Sbjct: 297 MTAVALLLGLEPAFVAINHVMRLMMLYMMPVVL 329 >UniRef50_Q0RKZ8 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RKZ8_FRAAA Length = 620 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 100/233 (42%), Gaps = 9/233 (3%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCM 64 W +L V LL V +PA L+ P++ G ++ G+ + LP +QA+LG + Sbjct: 71 WILLVVGCYLLGEMGEIVGVPAPQLVVPLLVGAFLALGGMVRRNLPAPTIRGSQAVLGVL 130 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + L S L ++ + A+ L T+ + L R S A G PGG+AA Sbjct: 131 MGSYLNISELRSVLGTALPLTAVTLATIALCLLAALLFTRTSRGSVTDAALGMMPGGSAA 190 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV----- 179 +VA A++ AD RLVA QYLRV VA A V + G + + Sbjct: 191 IVACAEELRADSRLVALSQYLRVGLVAVTAPAVVAVSHGTVGRPRPGSFPAYAHLVDGSS 250 Query: 180 -SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 + L + ++ G L LP+ + P L G L +GQ +P L Sbjct: 251 QLLGLAFLPGVCLLGARAGRRLGLPAPAL--PGLCGPGLGAGQDDRHRVPGVL 301 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 60/144 (41%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 +L ++ + G +G ++ +P+ +++P+L GA L G ++ LP + + +G Sbjct: 70 AWILLVVGCYLLGEMGEIVGVPAPQLVVPLLVGAFLALGGMVRRNLPAPTIRGSQAVLGV 129 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G + L L + A +A+C A TR A L PGG Sbjct: 130 LMGSYLNISELRSVLGTALPLTAVTLATIALCLLAALLFTRTSRGSVTDAALGMMPGGSA 189 Query: 302 TVAVIAAGSNADMALIMAMQTLRL 325 + A AD L+ Q LR+ Sbjct: 190 AIVACAEELRADSRLVALSQYLRV 213 >UniRef50_A8VW34 Beta-lactamase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW34_9BACI Length = 221 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 2/208 (0%) Query: 135 DIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAG 194 + L+ F +++ +LF + L + GD A A+ + I+ L I+ ++A Sbjct: 4 RLSLLCFKRFVLLLFCFLSPFLFLYLFSGDPAIAMERPSGSDDSTLIHGLWYIIPVILAF 63 Query: 195 TVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 LL P+G M+IP+L VL +++P+ L +A +A+G +G Q + + Sbjct: 64 RYASLL--PAGIMIIPLLITIVLTVSPASILDVPDPLFLLAQLAVGTSLGRSIAIQDVFQ 121 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 A R L+ + L+ ++D TA L+ +PGG+ + + A +AD Sbjct: 122 AGRYSLYYAGITVILILFSFASGYLLSVVTNLDLATAMLSAAPGGVIEMVLTADMVDADP 181 Query: 315 ALIMAMQTLRLFSILLTGPAIARFISTY 342 A++ A+Q R+ ILL P +++ Sbjct: 182 AVVTALQLTRILLILLFVPMGLKWLFVR 209 Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 1/139 (0%) Query: 25 LPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPI 83 LPA +++ P++ I+ ++ ++ +P FL AQ +G + +++ + Sbjct: 69 LPAGIMIIPLLITIVLTVSPASILDVPDPLFLLAQLAVGTSLGRSIAIQDVFQAGRYSLY 128 Query: 84 VLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQ 143 I ++ +L S G+LL ++L T ++PGG MV A AD +V +Q Sbjct: 129 YAGITVILILFSFASGYLLSVVTNLDLATAMLSAAPGGVIEMVLTADMVDADPAVVTALQ 188 Query: 144 YLRVLFVAGAAVLVTRMML 162 R+L + + + + Sbjct: 189 LTRILLILLFVPMGLKWLF 207 >UniRef50_UPI0001C3846E membrane protein AbrB duplication n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3846E Length = 207 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 1/161 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCMI 65 + ++++ ++++P LLGPMI GI+ ++ + LP+S L QAI+ Sbjct: 40 LIQMTIAIMAGWLLTSLNMPVGWLLGPMIVGILLALIWQKSTPLPKSFNLLGQAIVALTT 99 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 A + LT +L ++VT S G+LL R++ + TG G PG ++ Sbjct: 100 ATRFSPETLTLGKTYALPLLGCIVVTGAMSVCNGYLLWRWAKIDRTTGFLGCIPGAGPSL 159 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNA 166 VA+++ GAD VA +QY+R+L VA + Sbjct: 160 VAISEQMGADAIAVAVLQYIRILLVALIIPTLASFWFASPG 200 Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 66/157 (42%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 +L+ + +A++AG + L +P G +L PM+ G +L + LP+ + + Sbjct: 39 ILIQMTIAIMAGWLLTSLNMPVGWLLGPMIVGILLALIWQKSTPLPKSFNLLGQAIVALT 98 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 F + L +L I A+ + L R+ ID T +L PG + Sbjct: 99 TATRFSPETLTLGKTYALPLLGCIVVTGAMSVCNGYLLWRWAKIDRTTGFLGCIPGAGPS 158 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + I+ AD + +Q +R+ + L P +A F Sbjct: 159 LVAISEQMGADAIAVAVLQYIRILLVALIIPTLASFW 195 >UniRef50_D2YM36 Protein abrB n=35 Tax=Vibrio RepID=D2YM36_VIBMI Length = 347 Score = 94.6 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 111/278 (39%), Gaps = 6/278 (2%) Query: 45 ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVR 104 +T+ P+ L Q +LG + ++ + L + P+++ ++ L L + Sbjct: 51 LTIHTPKWLLLFVQIVLGISVGATISLTELGA-TLTVPVIVGLVCCLTLQIISSYLWLTK 109 Query: 105 YSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGD 164 G+ PG AA++ +++ V + +R++ + A+L++ Sbjct: 110 REGWTPFESLLGAVPGAMAAILVISESSQKPSTKVVYSHSVRLMILTLLALLISN----S 165 Query: 165 NAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQS-GQLI 223 +AV+ + L++++ G LL +P+ ML +L A S I Sbjct: 166 APDAVSVEGSLTAYAWLIFFTLALVSLLLGKASTLLGIPAPYMLAALLVTASFNSFSTGI 225 Query: 224 TIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRF 283 ++LP+W++ A +G IG L A+ + L + G++ + Sbjct: 226 EMQLPKWMVLFATALLGILIGSRIADTTLREAIAYSRAGFMVTMIGLLVAVGVSGVFSIL 285 Query: 284 MHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQ 321 + ++ LA PG ++ + +A + + A +M Sbjct: 286 LDKSWVVLLLAWVPGSVEAMTAVALLLSMEPAFVMINH 323 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 2/157 (1%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS--MRGITLQLPRSAFLAAQAI 60 L + L ++SLLL + +PA +L ++ F+ GI +QLP+ L A A+ Sbjct: 181 WLIFFTLALVSLLLGKASTLLGIPAPYMLAALLVTASFNSFSTGIEMQLPKWMVLFATAL 240 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG +I + + L + ++ LL + V + PG Sbjct: 241 LGILIGSRIADTTLREAIAYSRAGFMVTMIGLLVAVGVSGVFSILLDKSWVVLLLAWVPG 300 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLV 157 AM A+A + V LR+L + ++ Sbjct: 301 SVEAMTAVALLLSMEPAFVMINHALRLLLLYSLPAML 337 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 1/126 (0%) Query: 199 LLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRP 258 LL +P M I VL + +TI P+WLL + +G +G L L Sbjct: 27 LLSIPLSEMFIAAGLIIVLHKKRFLTIHTPKWLLLFVQIVLGISVGATISLTELGATL-T 85 Query: 259 LPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIM 318 +P I+ + L LT+ + L PG + + VI+ S ++ Sbjct: 86 VPVIVGLVCCLTLQIISSYLWLTKREGWTPFESLLGAVPGAMAAILVISESSQKPSTKVV 145 Query: 319 AMQTLR 324 ++R Sbjct: 146 YSHSVR 151 >UniRef50_A5L0B9 Ammonia monooxygenase n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L0B9_9GAMM Length = 243 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 115/245 (46%), Gaps = 14/245 (5%) Query: 12 LSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTG 71 ++L+ S+ F +P + G +IA ++ + G TL LP+S Q ILG + + Sbjct: 7 IALVGSLLFTYFEIPLGAMFGALIALLVTAKAGFTLALPKSTLTGVQLILGATVGSIVP- 65 Query: 72 SILTTLAVNWPIVLAILLVTLLSSAIVG--WLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 + TL+ +PI+L + LV +S+ ++ L + G+ PG AA++ + Sbjct: 66 --VQTLSKGYPILLFVGLVLCMSALVLTSYLWLSKREKWSKYESLLGAVPGAMAAVLVIN 123 Query: 130 QDYGADIRLVAFMQYLRVLF-VAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTIL 188 +++ + V F +R++F + +A+LV+ + A++ +W +LL + Sbjct: 124 ENHNSPSSKVIFTHTVRLIFLIIASALLVSTDNSPVSGPAISLDNLW-------ILLPLF 176 Query: 189 LAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQL-ITIELPEWLLAMAYMAIGWRIGLGF 247 LA +G + + P+ M+ MLA + S +P L+ +A A+G IG+ Sbjct: 177 LAYFSGLLLDKIGTPAPYMVTGMLATMFVNSELPSYNFLVPTELVFIATSALGALIGIRL 236 Query: 248 DKQIL 252 ++ Sbjct: 237 KDRLF 241 Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 59/152 (38%), Gaps = 2/152 (1%) Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 L +A+V + +P G M ++A V T+ LP+ L + +G +G Sbjct: 3 LASFIALVGSLLFTYFEIPLGAMFGALIALLVTAKAGF-TLALPKSTLTGVQLILGATVG 61 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 Q L + P+ + + + A+ L++ + L PG + V Sbjct: 62 SIVPVQTLSKGY-PILLFVGLVLCMSALVLTSYLWLSKREKWSKYESLLGAVPGAMAAVL 120 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 VI N+ + ++ T+RL +++ + Sbjct: 121 VINENHNSPSSKVIFTHTVRLIFLIIASALLV 152 >UniRef50_Q1AVE7 Putative ammonia monooxygenase-like protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVE7_RUBXD Length = 345 Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 119/340 (35%), Gaps = 5/340 (1%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMI-AGIIFSMRGIT-LQLPRSAFLAAQ 58 M L LC + +HLPA +G M G+ + G L P A Q Sbjct: 1 MSPLAAVSLCAAGAAGAAAARGLHLPAGGFIGAMAGVGMALGLMGFPDLGTPPVLGGALQ 60 Query: 59 AILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSS 118 ++G ++ + + + A + + L S + + + + T + ++ Sbjct: 61 CLVGVLVGLRMEREAVRSGARALLPAALLAALFLASGLLAAYAAAALTGIHLKTALFAAA 120 Query: 119 PGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPP 178 GG M + GA+ +VA + +R+L V AA L+ + A P Sbjct: 121 TGGLTEMATIGASQGANGPVVAAVHLVRLLLVIFAASLLVGRLRRKAPRAPAGREGSPEP 180 Query: 179 VSIN--LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 S + LP+G ++ ML + L Sbjct: 181 ASRARLAGIAAAGVAGGVLGLAATPLPAGGVVGSMLGAGAARL-LLPGAVPERGFQFAVQ 239 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 G +GLG ++ + LL +A + L R +D TA A++ Sbjct: 240 ALAGGVVGLGLSEEFFRTLHQLAGAALLINAVQVAAWLAAFYLLVRAFGLDAATAAFASA 299 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 PGG+ T I + AD+ + + R+ + ++ P IA Sbjct: 300 PGGMGTTLSIIGETRADLVAVAFVHLFRVSATVVAIPLIA 339 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 1/152 (0%) Query: 198 CLLRLPSGTMLIPML-AGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRAL 256 L LP+G + M G L + P L +G +GL +++ + Sbjct: 21 RGLHLPAGGFIGAMAGVGMALGLMGFPDLGTPPVLGGALQCLVGVLVGLRMEREAVRSGA 80 Query: 257 RPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMAL 316 R L L LA A+ I TA A + GGL +A I A A+ + Sbjct: 81 RALLPAALLAALFLASGLLAAYAAAALTGIHLKTALFAAATGGLTEMATIGASQGANGPV 140 Query: 317 IMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + A+ +RL ++ + + AP+ A Sbjct: 141 VAAVHLVRLLLVIFAASLLVGRLRRKAPRAPA 172 >UniRef50_C1XST2 Membrane protein AbrB duplication n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XST2_9DEIN Length = 162 Score = 78.8 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 68/138 (49%) Query: 188 LLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF 247 L + G V L LP G ++ M+ A Q + P + + +A G IGL F Sbjct: 9 LCGIALGLVFWRLGLPGGPVVGTMIGTAAYQLFTPVKAITPNGMDLLVQLAAGILIGLSF 68 Query: 248 DKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307 ++++L A + LP + + AL+ + AG+AW L R+ I +TA +PGG+ + V+A Sbjct: 69 NRELLHIAQQALPWAVGAALALIGLGAGLAWILDRYTGIGLVTALFGLAPGGVTGMGVLA 128 Query: 308 AGSNADMALIMAMQTLRL 325 AL+ T+R+ Sbjct: 129 QAEGGKPALVGVFHTVRI 146 Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 1/138 (0%) Query: 11 VLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCMIAQNL 69 + + L + F + LP ++G MI + + + P L Q G +I + Sbjct: 9 LCGIALGLVFWRLGLPGGPVVGTMIGTAAYQLFTPVKAITPNGMDLLVQLAAGILIGLSF 68 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 +L P + L + A + W+L RY+ + T +G +PGG M +A Sbjct: 69 NRELLHIAQQALPWAVGAALALIGLGAGLAWILDRYTGIGLVTALFGLAPGGVTGMGVLA 128 Query: 130 QDYGADIRLVAFMQYLRV 147 Q G LV +R+ Sbjct: 129 QAEGGKPALVGVFHTVRI 146 >UniRef50_C1TRS0 Membrane protein AbrB duplication n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRS0_9BACT Length = 162 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 74/151 (49%) Query: 191 VVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQ 250 + G +G L R+PSG M+ M+AG ++ +E WL A++ + + I D Sbjct: 12 ALGGLIGHLCRMPSGIMVGGMIAGLAVKIAFAPDMESSRWLSAISQLLVAGAIVFNSDVS 71 Query: 251 ILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGS 310 + +P + +L +A L+RF +D +T+ A+SPGGL + + A S Sbjct: 72 SVKSLPGMIPVAMGYSVVMLGFGVLVALALSRFFGMDILTSLFASSPGGLSGLGLAATES 131 Query: 311 NADMALIMAMQTLRLFSILLTGPAIARFIST 341 +A+ L + R+ +L+ P +AR++S Sbjct: 132 DANAPLALLFHVSRITLVLMVVPLLARYLSR 162 Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 1/155 (0%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGCMIA 66 M+ L + +P+ +++G MIAG+ + ++ R +Q ++ I Sbjct: 6 MVWGAVALGGLIGHLCRMPSGIMVGGMIAGLAVKIAFAPDMESSRWLSAISQLLVAGAIV 65 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 N S + +L P+ + +V L +V L R+ + T + SSPGG + + Sbjct: 66 FNSDVSSVKSLPGMIPVAMGYSVVMLGFGVLVALALSRFFGMDILTSLFASSPGGLSGLG 125 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 A + A+ L R+ V L+ R + Sbjct: 126 LAATESDANAPLALLFHVSRITLVLMVVPLLARYL 160 >UniRef50_B6WW29 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WW29_9DELT Length = 167 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 1/163 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGCMI 65 +L + + F +H+P +LG ++A + M G + PR L AQ +G M+ Sbjct: 5 LLLIACGIAGGLLFFFLHIPGGAMLGAVVAVLAVKMLGHVEADTPRLFQLGAQIAIGVMV 64 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 +TG L + P++ + +++ A+ W + R + L + +SPGG A+ Sbjct: 65 GNMMTGGTLLEIRAMAPLMFGSTALLIVAGALGAWFICRSAGLDAGSAILATSPGGLQAV 124 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA 168 V MA D G + V +R+ V A L++ ++ + Sbjct: 125 VGMASDLGTNAPAVLAFHLVRLYTVLLLAPLLSWLLHRLLPHS 167 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 65/147 (44%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 LL I + G + L +P G ML ++A ++ + + P A +AIG Sbjct: 3 TFLLLIACGIAGGLLFFFLHIPGGAMLGAVVAVLAVKMLGHVEADTPRLFQLGAQIAIGV 62 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G LL P + S L+ A AW + R +D +A LATSPGGL Sbjct: 63 MVGNMMTGGTLLEIRAMAPLMFGSTALLIVAGALGAWFICRSAGLDAGSAILATSPGGLQ 122 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSI 328 V +A+ + ++A +RL+++ Sbjct: 123 AVVGMASDLGTNAPAVLAFHLVRLYTV 149 >UniRef50_Q2JIQ1 Putative membrane protein n=2 Tax=Synechococcus RepID=Q2JIQ1_SYNJB Length = 166 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 2/147 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL--QLPRSAFLAAQAIL 61 + + ++ L ++ + + LPA L+G M+A + ++ G P A Q +L Sbjct: 1 MSYLWTVLIGLAGALIGVKLRLPAGALVGSMVAVGLVNVWGAIPIPAPPAGIRFAMQVVL 60 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G ++ LT L L W L ++ + + + G+L+ R+ + T G++PGG Sbjct: 61 GILLGTKLTADTLLALKDLWRPALLCTVIAVSTGVLSGYLISRWLGIERLTAILGTAPGG 120 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVL 148 + M +A D GA V M R++ Sbjct: 121 ISDMSLIALDMGAQTSTVVVMHLARLI 147 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 1/147 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMA-YMAI 239 ++ L T+L+ + +G LRLP+G ++ M+A ++ I I P + A + + Sbjct: 1 MSYLWTVLIGLAGALIGVKLRLPAGALVGSMVAVGLVNVWGAIPIPAPPAGIRFAMQVVL 60 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G +G LL LL ++ + ++R++ I+ +TA L T+PGG Sbjct: 61 GILLGTKLTADTLLALKDLWRPALLCTVIAVSTGVLSGYLISRWLGIERLTAILGTAPGG 120 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLF 326 + +++IA A + ++ M RL Sbjct: 121 ISDMSLIALDMGAQTSTVVVMHLARLI 147 >UniRef50_A8VW33 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW33_9BACI Length = 166 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 71/148 (47%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 +LL+T+ A+ + LL LP ML P+ A LQ+ T+ + + +G Sbjct: 8 SLLMTLATALTGAALFSLLSLPLPWMLGPLTAVMTLQAVIGQTLYWHPMIKNAGLIILGI 67 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 GL F ++ L P + F L+AI +++ LT+ + ID ++ + PGGL Sbjct: 68 SFGLYFTIDTIVMTLPYFPIYIAMTFVLIAISVSLSYALTKLIPIDPASSIFGSIPGGLT 127 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSIL 329 + + + +A+ A + QT+RL +L Sbjct: 128 EMVITSQSFHANQAFVTVFQTIRLVIVL 155 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 1/145 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAG-IIFSMRGITLQLPRSAFLAAQAILGCMI 65 M +L + F + LP +LGP+ A + ++ G TL A ILG Sbjct: 10 LMTLATALTGAALFSLLSLPLPWMLGPLTAVMTLQAVIGQTLYWHPMIKNAGLIILGISF 69 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 T + +PI +A+ V + S + + L + + + +GS PGG M Sbjct: 70 GLYFTIDTIVMTLPYFPIYIAMTFVLIAISVSLSYALTKLIPIDPASSIFGSIPGGLTEM 129 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFV 150 V +Q + A+ V Q +R++ V Sbjct: 130 VITSQSFHANQAFVTVFQTIRLVIV 154 >UniRef50_B7A529 Membrane protein AbrB duplication n=3 Tax=Thermus RepID=B7A529_THEAQ Length = 157 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 3/160 (1%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 ++LL L V G + L LP G ++ ML L +P+ L +A G Sbjct: 1 MDLLRASLSGVFLGLLFYRLGLPGGAVVGAMLGTG-LHQLLASPAPIPKGLDLAVQLAAG 59 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 +GL F K++L + + LP LLS A LA+ +A+ L + + A +PGG+ Sbjct: 60 VLVGLSFRKELL--SPKLLPYALLSALAFLALALLLAFLLAKPLGRPPQALLFALAPGGI 117 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 + ++ AL+ T+R+ ++ L P +AR + Sbjct: 118 TGMGPLSQAEGGSPALVGVFHTVRVLALFLLVPFLARLLR 157 Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 2/149 (1%) Query: 13 SLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGS 72 + L + F + LP ++G M+ + + +P+ LA Q G ++ + Sbjct: 10 GVFLGLLFYRLGLPGGAVVGAMLGTGLHQLLASPAPIPKGLDLAVQLAAGVLVGLSFRKE 69 Query: 73 ILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDY 132 +L+ P L L L + ++ +LL + P + +PGG M ++Q Sbjct: 70 LLS--PKLLPYALLSALAFLALALLLAFLLAKPLGRPPQALLFALAPGGITGMGPLSQAE 127 Query: 133 GADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 G LV +RVL + + R++ Sbjct: 128 GGSPALVGVFHTVRVLALFLLVPFLARLL 156 >UniRef50_A5GHQ3 Uncharacterized AbrB family conserved membrane protein n=29 Tax=cellular organisms RepID=A5GHQ3_SYNPW Length = 172 Score = 51.5 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 2/131 (1%) Query: 13 SLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT--LQLPRSAFLAAQAILGCMIAQNLT 70 + + L LPAA L G +I + SM G + P A Q +G +I LT Sbjct: 15 GTVFGLLALKTGLPAAPLAGALIGAAVVSMSGRVEVAEWPSGTRTALQIGIGTVIGTGLT 74 Query: 71 GSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQ 130 + L L W + I + +L+ +G R + G++PGG + M + Sbjct: 75 RASLDQLQNLWRPAVLITVTLVLTGIAIGLWTSRLLGVDPLITLLGAAPGGISGMSLVGA 134 Query: 131 DYGADIRLVAF 141 DYG + A Sbjct: 135 DYGVGAAVAAL 145 Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 1/133 (0%) Query: 189 LAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQ-LITIELPEWLLAMAYMAIGWRIGLGF 247 V G + LP+ + ++ AV+ + E P + IG IG G Sbjct: 14 AGTVFGLLALKTGLPAAPLAGALIGAAVVSMSGRVEVAEWPSGTRTALQIGIGTVIGTGL 73 Query: 248 DKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307 + L + +L L+ + +R + +D + L +PGG+ ++++ Sbjct: 74 TRASLDQLQNLWRPAVLITVTLVLTGIAIGLWTSRLLGVDPLITLLGAAPGGISGMSLVG 133 Query: 308 AGSNADMALIMAM 320 A A+ Sbjct: 134 ADYGVGAAVAALH 146 >UniRef50_UPI000186D3F5 sodium antiporter, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D3F5 Length = 670 Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 60/156 (38%), Gaps = 14/156 (8%) Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRL 202 + R+L + L+ ++ F L L + A + G +L L Sbjct: 159 HFARLLALVLVGFLLWGIVYCILGSTAAPGGQLF-----GLALLCICANIGGWFATVLTL 213 Query: 203 PSGTMLIPMLAGAVLQSGQLITI-----ELPEWLLAMAYMAIGWRIGLGFDKQILLRALR 257 P+ ++ + G + Q+ L+ I E+ L +A + I R GL D + L R Sbjct: 214 PA--LVGMLAVGVLFQNVGLVHISEEYKEVCSILRKIALVIILIRAGLDLDPKALKRL-- 269 Query: 258 PLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 L I L + + CA +A M + ++ +L Sbjct: 270 ALSTIKLGLVPWIVECAIIATMTYFLMGLPWIWGFL 305 >UniRef50_Q0RKZ7 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RKZ7_FRAAA Length = 79 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 36/60 (60%) Query: 283 FMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 + I F+ +YLAT+PGG++ V A ++ D+ ++ +Q+ RL ++L P + R++ Sbjct: 1 MIGIAFLESYLATTPGGINAVLATATVAHVDVGVVSTVQSFRLVLVVLLTPPLVRWLLRR 60 >UniRef50_A6QBE6 Thiol:disulfide interchange protein DsbD n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QBE6_SULNB Length = 592 Score = 41.9 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 93/255 (36%), Gaps = 24/255 (9%) Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G + L I T + W + + L+ L+ ++ G+ + G +W Sbjct: 235 VVGVIAGL-LGADIQTAMQNPWVLTIFALMFVALAFSLFGYYEI------GLPASW---- 283 Query: 120 GGAAAMVAMAQDYGADIRLV--AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFP 177 + + +++ + G +V A M L L V + + + + Sbjct: 284 --QSKLSSVSDEAGQKGGIVGTAVMGLLSALIVGPCVAPPLGGAVLFISHTGDALLGGTA 341 Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSG---QLITIELPEWLLAM 234 +++ + + L +V G + P G M + V+ G +++ LP+ + + Sbjct: 342 LFIMSMGMGMPLLLVGIGAGKFMPKPGGWMTVVSQVFGVMMLGLGIFMLSRILPDSVTLI 401 Query: 235 --AYMAIGWRIGLG-FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 + + IG + +G FD + ++ L Q+L +F L + + Sbjct: 402 LWSLLFIGSALYMGVFDPSSTKKGMKKLVQLLAVVFMLYGASLFVGAISGADSMLRPFEK 461 Query: 292 YLATSPGGLDTVAVI 306 + + GG + + Sbjct: 462 FTS---GGGTAMVAV 473 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A8TWK7 Putative ammonia monooxygenase n=1 Tax=alpha pro... 221 4e-56 UniRef50_A8ER15 Putative uncharacterized protein n=1 Tax=Arcobac... 220 6e-56 UniRef50_C0VNM7 Ammonia monooxygenase n=1 Tax=Acinetobacter sp. ... 216 9e-55 UniRef50_P75747 Protein abrB n=117 Tax=Bacteria RepID=ABRB_ECOLI 211 2e-53 UniRef50_C6DHB0 Membrane protein AbrB duplication n=5 Tax=Pectob... 211 4e-53 UniRef50_B4AWS0 Membrane protein AbrB duplication n=3 Tax=Cyanob... 210 6e-53 UniRef50_Q8ET66 Hypothetical conserved protein n=1 Tax=Oceanobac... 205 1e-51 UniRef50_B7KIK2 Membrane protein AbrB duplication n=3 Tax=Cyanob... 205 2e-51 UniRef50_Q1UZU3 Possible AbrB protein n=4 Tax=root RepID=Q1UZU3_... 205 2e-51 UniRef50_C6CTI7 Membrane protein AbrB duplication n=1 Tax=Paenib... 204 5e-51 UniRef50_C5DA14 Membrane protein AbrB duplication n=2 Tax=Geobac... 203 6e-51 UniRef50_C4LFP7 Membrane protein AbrB duplication n=3 Tax=Proteo... 201 2e-50 UniRef50_Q2CGP3 Possible AbrB protein n=1 Tax=Oceanicola granulo... 200 1e-49 UniRef50_Q48HD1 AbrB protein n=9 Tax=Gammaproteobacteria RepID=Q... 199 1e-49 UniRef50_B5ZWF3 Membrane protein AbrB duplication n=9 Tax=Alphap... 198 2e-49 UniRef50_C8SMW8 Membrane protein AbrB duplication n=5 Tax=cellul... 198 2e-49 UniRef50_C3KNJ9 Possible monooxygenase n=1 Tax=Rhizobium sp. NGR... 197 4e-49 UniRef50_A5TXE3 Possible ammonia monooxygenase n=8 Tax=Fusobacte... 197 5e-49 UniRef50_Q2BDN3 Putative uncharacterized protein n=1 Tax=Bacillu... 197 5e-49 UniRef50_Q11GX1 Putative ammonia monooxygenase n=1 Tax=Chelativo... 195 1e-48 UniRef50_A1HS75 Putative ammonia monooxygenase n=1 Tax=Thermosin... 195 1e-48 UniRef50_B9R4Z7 Putative ammonia monooxygenase superfamily n=1 T... 193 6e-48 UniRef50_A9BSE8 Membrane protein AbrB duplication n=8 Tax=Burkho... 193 9e-48 UniRef50_C9S1X9 Membrane protein AbrB duplication n=5 Tax=Geobac... 191 3e-47 UniRef50_C6JLU4 Putative uncharacterized protein n=2 Tax=Fusobac... 190 5e-47 UniRef50_Q167T9 Putative uncharacterized protein n=7 Tax=Rhodoba... 188 2e-46 UniRef50_Q223M5 Putative ammonia monooxygenase n=1 Tax=Rhodofera... 187 5e-46 UniRef50_B6ALI3 Putative ammonia monooxygenase n=2 Tax=Leptospir... 187 6e-46 UniRef50_Q7D1Z3 Putative uncharacterized protein n=1 Tax=Agrobac... 186 1e-45 UniRef50_A6CU26 Putative uncharacterized protein n=1 Tax=Bacillu... 186 1e-45 UniRef50_C0Z7B6 Conserved hypothetical membrane protein n=1 Tax=... 186 1e-45 UniRef50_A8IB98 Putative ammonia monooxygenase n=1 Tax=Azorhizob... 186 1e-45 UniRef50_B9YZ45 Membrane protein AbrB duplication n=2 Tax=Betapr... 185 2e-45 UniRef50_A3K1Y0 Putative ammonia monooxygenase n=3 Tax=Rhodobact... 185 2e-45 UniRef50_B6ITE5 Ammonia monooxygenase, putative n=1 Tax=Rhodospi... 185 3e-45 UniRef50_A4EFY2 Putative ammonia monooxygenase n=3 Tax=Bacteria ... 185 3e-45 UniRef50_A6VSZ2 Putative ammonia monooxygenase n=1 Tax=Marinomon... 183 7e-45 UniRef50_C6Q0M4 Membrane protein AbrB duplication n=1 Tax=Clostr... 183 1e-44 UniRef50_Q0FTZ5 Putative ammonia monooxygenase n=1 Tax=Roseovari... 181 3e-44 UniRef50_B8ELT3 Membrane protein AbrB duplication n=6 Tax=Rhizob... 181 4e-44 UniRef50_A6TSB9 Putative ammonia monooxygenase n=1 Tax=Alkaliphi... 181 4e-44 UniRef50_C9KL73 Putative membrane protein AbrB duplication n=1 T... 181 4e-44 UniRef50_Q9RC51 BH3837 protein n=3 Tax=Bacillus RepID=Q9RC51_BACHD 180 5e-44 UniRef50_O07568 Uncharacterized protein yhjN n=6 Tax=Bacillus Re... 180 8e-44 UniRef50_B4U2X4 Putative ammonia monooxygenase n=3 Tax=Streptoco... 180 9e-44 UniRef50_A3JPA2 Putative ammonia monooxygenase n=1 Tax=Rhodobact... 180 9e-44 UniRef50_B3QBE9 Membrane protein AbrB duplication n=9 Tax=Bradyr... 180 1e-43 UniRef50_B5JCA9 Putative ammonia monooxygenase superfamily n=3 T... 179 2e-43 UniRef50_C5SZI4 Membrane protein AbrB duplication n=1 Tax=Acidov... 178 2e-43 UniRef50_A4U1B8 Ammonia monooxygenase n=3 Tax=Magnetospirillum R... 178 3e-43 UniRef50_C8WDL2 Membrane protein AbrB duplication n=6 Tax=Zymomo... 177 4e-43 UniRef50_Q2RP17 Putative ammonia monooxygenase n=4 Tax=Alphaprot... 177 5e-43 UniRef50_C6HYJ9 Putative ammonia monooxygenase n=1 Tax=Leptospir... 177 7e-43 UniRef50_Q09A72 AbrB protein n=2 Tax=Cystobacterineae RepID=Q09A... 176 9e-43 UniRef50_A3TX86 Putative uncharacterized protein n=1 Tax=Oceanic... 176 1e-42 UniRef50_B1HT63 Protein abrB (AidB regulator) n=2 Tax=Bacillacea... 176 1e-42 UniRef50_Q5HNN7 Membrane protein, putative n=14 Tax=Staphylococc... 176 1e-42 UniRef50_A0NRD3 Putative uncharacterized protein n=1 Tax=Labrenz... 175 2e-42 UniRef50_A8Z2I6 Possible ammonia monooxygenase n=51 Tax=Staphylo... 175 2e-42 UniRef50_C4ZKZ9 Membrane protein AbrB duplication n=1 Tax=Thauer... 175 2e-42 UniRef50_Q4KE96 Ammonia monooxygenase family protein n=1 Tax=Pse... 175 2e-42 UniRef50_C2BYG7 Possible ammonia monooxygenase n=1 Tax=Listeria ... 174 4e-42 UniRef50_D2RND1 Membrane protein AbrB duplication n=1 Tax=Acidam... 174 6e-42 UniRef50_A3VKP5 Putative uncharacterized protein n=1 Tax=Rhodoba... 174 6e-42 UniRef50_D0S7S8 Putative uncharacterized protein n=1 Tax=Acineto... 173 7e-42 UniRef50_A6VAM6 Membrane protein, putative n=20 Tax=Pseudomonas ... 173 8e-42 UniRef50_A8LSV3 Putative uncharacterized protein n=1 Tax=Dinoros... 172 2e-41 UniRef50_C4LH35 Putative membrane protein n=1 Tax=Corynebacteriu... 171 2e-41 UniRef50_D0DD06 Putative ammonia monooxygenase superfamily prote... 171 2e-41 UniRef50_B0UQK6 Membrane protein AbrB duplication n=9 Tax=Proteo... 171 3e-41 UniRef50_B6YYA2 Putative ammonia monooxygenase n=1 Tax=Pseudovib... 171 3e-41 UniRef50_B6AYQ5 Putative ammonia monooxygenase n=1 Tax=Rhodobact... 171 4e-41 UniRef50_D1VJI4 Membrane protein AbrB duplication n=1 Tax=Franki... 170 6e-41 UniRef50_A6FPC2 Ureidoglycolate hydrolase n=1 Tax=Roseobacter sp... 169 1e-40 UniRef50_C1DL52 Ammonia monooxygenase n=3 Tax=Pseudomonadaceae R... 168 2e-40 UniRef50_D0RN43 Putative ammonia monooxygenase superfamily prote... 168 3e-40 UniRef50_D2LU31 Membrane protein AbrB duplication n=1 Tax=Bacill... 164 3e-39 UniRef50_C3K9K9 Putative transmembrane protein n=1 Tax=Pseudomon... 164 4e-39 UniRef50_A9D2G7 Putative uncharacterized protein n=1 Tax=Hoeflea... 164 5e-39 UniRef50_C2AL91 Membrane protein AbrB duplication n=7 Tax=Coryne... 164 5e-39 UniRef50_A8MLZ6 Conserved hypothetical membrane-spanning protein... 163 6e-39 UniRef50_Q1YFT4 Possible ammonia monooxygenase n=2 Tax=Aurantimo... 163 7e-39 UniRef50_A8TSC8 Putative ammonia monooxygenase n=1 Tax=alpha pro... 163 9e-39 UniRef50_B9Y4Q0 Putative uncharacterized protein n=1 Tax=Holdema... 162 2e-38 UniRef50_C2LN52 Membrane-associated ammonia monooxygenase n=8 Ta... 161 3e-38 UniRef50_C4XND2 Hypothetical membrane protein n=1 Tax=Desulfovib... 160 6e-38 UniRef50_A3VX57 Putative uncharacterized protein n=4 Tax=Rhodoba... 160 6e-38 UniRef50_C0VV00 Ammonia monooxygenase n=2 Tax=Corynebacterium gl... 160 8e-38 UniRef50_D0L4U6 Membrane protein AbrB duplication n=1 Tax=Gordon... 159 1e-37 UniRef50_B6R4M6 Putative ammonia monooxygenase superfamily prote... 158 2e-37 UniRef50_A7IC16 Putative ammonia monooxygenase n=2 Tax=Xanthobac... 156 8e-37 UniRef50_B5JBC7 Putative ammonia monooxygenase superfamily n=2 T... 156 9e-37 UniRef50_B9E738 Putative uncharacterized protein n=1 Tax=Macroco... 156 9e-37 UniRef50_A1AYU4 Putative ammonia monooxygenase n=5 Tax=Rhodobact... 155 2e-36 UniRef50_Q0S615 Possible ammonia monooxygenase n=2 Tax=Rhodococc... 154 3e-36 UniRef50_C0XTR9 Ammonia monooxygenase n=1 Tax=Corynebacterium li... 154 6e-36 UniRef50_B8FR89 Membrane protein AbrB duplication n=4 Tax=Desulf... 153 6e-36 UniRef50_B4AUN7 Membrane protein AbrB duplication n=1 Tax=Cyanot... 153 1e-35 UniRef50_D2S6B3 Membrane protein AbrB duplication n=2 Tax=Actino... 152 1e-35 UniRef50_UPI0001AF51FB hypothetical protein MkanA1_02057 n=1 Tax... 151 3e-35 UniRef50_C8S2H9 Putative ammonia monooxygenase n=1 Tax=Rhodobact... 151 5e-35 UniRef50_Q5LXH6 Membrane protein, putative n=2 Tax=root RepID=Q5... 149 2e-34 UniRef50_A8LC15 Putative ammonia monooxygenase n=1 Tax=Frankia s... 148 3e-34 UniRef50_Q1GD07 Putative ammonia monooxygenase n=2 Tax=Ruegeria ... 147 5e-34 UniRef50_B2A0P8 Putative ammonia monooxygenase-like protein n=1 ... 147 5e-34 UniRef50_A1T9W3 Putative ammonia monooxygenase n=1 Tax=Mycobacte... 147 5e-34 UniRef50_Q3IVJ5 AbrB protein (AidB regulator) n=3 Tax=Rhodobacte... 147 6e-34 UniRef50_Q1I8F5 Putative ammonia monooxygenase n=1 Tax=Pseudomon... 146 9e-34 UniRef50_D1Y8H5 Membrane protein AbrB duplication n=1 Tax=Pyrami... 146 1e-33 UniRef50_C2AKB5 Membrane protein AbrB duplication n=1 Tax=Tsukam... 144 3e-33 UniRef50_B7RQ37 Membrane protein AbrB duplication n=4 Tax=Rhodob... 144 4e-33 UniRef50_C8RVR3 Membrane protein n=2 Tax=Corynebacterium jeikeiu... 143 7e-33 UniRef50_A6D2G3 Putative uncharacterized protein n=1 Tax=Vibrio ... 141 5e-32 UniRef50_UPI0001C32335 membrane protein AbrB duplication n=1 Tax... 139 1e-31 UniRef50_Q8KVY0 RC210 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KVY0_9RHOB 134 5e-30 UniRef50_B8HRF2 Membrane protein AbrB duplication n=6 Tax=Cyanob... 134 5e-30 UniRef50_Q399M7 Putative ammonia monooxygenase n=2 Tax=Proteobac... 132 2e-29 UniRef50_B9KW55 Ammonia monooxygenase n=1 Tax=Rhodobacter sphaer... 131 3e-29 UniRef50_C8NRG7 Transport protein n=13 Tax=Corynebacterium RepID... 128 2e-28 UniRef50_A5G1A0 Putative ammonia monooxygenase n=1 Tax=Acidiphil... 128 3e-28 UniRef50_Q0FKP2 Putative uncharacterized protein n=2 Tax=Roseova... 128 3e-28 UniRef50_UPI0000383818 COG3180: Putative ammonia monooxygenase n... 125 3e-27 UniRef50_D2YM36 Protein abrB n=35 Tax=Vibrio RepID=D2YM36_VIBMI 122 2e-26 UniRef50_B1VGV1 Putative membrane protein n=1 Tax=Corynebacteriu... 117 8e-25 UniRef50_C9YG31 Protein abrB n=1 Tax=Curvibacter putative symbio... 114 5e-24 UniRef50_Q0RKZ8 Putative uncharacterized protein n=1 Tax=Frankia... 109 2e-22 UniRef50_A8VW34 Beta-lactamase n=1 Tax=Bacillus selenitireducens... 105 2e-21 UniRef50_Q1AVE7 Putative ammonia monooxygenase-like protein n=1 ... 100 8e-20 UniRef50_UPI0001C3846E membrane protein AbrB duplication n=1 Tax... 100 8e-20 UniRef50_A5L0B9 Ammonia monooxygenase n=1 Tax=Vibrionales bacter... 100 9e-20 UniRef50_Q2JIQ1 Putative membrane protein n=2 Tax=Synechococcus ... 80 1e-13 UniRef50_C1XST2 Membrane protein AbrB duplication n=1 Tax=Meioth... 79 2e-13 UniRef50_C1TRS0 Membrane protein AbrB duplication n=1 Tax=Dethio... 78 4e-13 UniRef50_B6WW29 Putative uncharacterized protein n=1 Tax=Desulfo... 76 2e-12 UniRef50_A8VW33 Putative uncharacterized protein n=1 Tax=Bacillu... 74 6e-12 UniRef50_UPI000186D3F5 sodium antiporter, putative n=1 Tax=Pedic... 74 6e-12 UniRef50_B7A529 Membrane protein AbrB duplication n=3 Tax=Thermu... 63 1e-08 UniRef50_A5GHQ3 Uncharacterized AbrB family conserved membrane p... 61 7e-08 UniRef50_Q0RKZ7 Putative uncharacterized protein n=1 Tax=Frankia... 48 5e-04 Sequences not found previously or not previously below threshold: UniRef50_Q9VM74 Nha1, isoform A n=20 Tax=Neoptera RepID=Q9VM74_D... 51 9e-05 UniRef50_Q95U27 GH12682p n=3 Tax=Sophophora RepID=Q95U27_DROME 44 0.009 UniRef50_A8PNS2 Na+/H+ antiporter n=1 Tax=Rickettsiella grylli R... 41 0.081 >UniRef50_A8TWK7 Putative ammonia monooxygenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWK7_9PROT Length = 367 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 69/341 (20%), Positives = 137/341 (40%), Gaps = 1/341 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 + L + F LP ++G M+A I S+ G +++ AILG M Sbjct: 26 SMALALALGTAGGLLFAWAKLPLPWMMGAMVATTIASVAGANIRVDYRLRTVMIAILGIM 85 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + S++ + + +L+ +++ ++ W + + T + SSPGG Sbjct: 86 LGSAFQPSLIDRIGEWTITIAGLLVYAIVAGSLCTWYFRKAAGYDAVTSYFASSPGGLNE 145 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG-DNAEAVNQHIVWFPPVSINL 183 MV + ++ G D R++A R+L V + ++ A + ++ Sbjct: 146 MVIVGREMGGDDRIIALTHSARILLVVMTLPFLFQLFTDYTPAAGLLPRGGSIDMPLLDW 205 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 + VV V LR+P+ ++ PML A + + P L+A+A + +G I Sbjct: 206 AILAGCGVVGAIVAKRLRIPAAVLIGPMLLSAGIHVAGVTQATPPSLLVAIAQVVMGTGI 265 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G F + ++ + + S LL + + L + + + LA +PGGL + Sbjct: 266 GCRFAGTAVRDIVKVVGVSIGSTVILLVLGVLFGFALQQITDVPWFVLVLAYAPGGLAEM 325 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 +++A D+A + R+ I++ P R + Sbjct: 326 SLVALALGRDVAFVATHHIFRIGFIVILAPLAFRIMRRTGR 366 Score = 81.8 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 1/166 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAF-LAAQA 59 MP+L W +L ++ +I + +PAA+L+GPM+ + G+T P S AQ Sbjct: 200 MPLLDWAILAGCGVVGAIVAKRLRIPAAVLIGPMLLSAGIHVAGVTQATPPSLLVAIAQV 259 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G I G+ + + + + ++ L+ + G+ L + + +P +P Sbjct: 260 VMGTGIGCRFAGTAVRDIVKVVGVSIGSTVILLVLGVLFGFALQQITDVPWFVLVLAYAP 319 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN 165 GG A M +A G D+ VA R+ F+ A L R+M Sbjct: 320 GGLAEMSLVALALGRDVAFVATHHIFRIGFIVILAPLAFRIMRRTG 365 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 66/165 (40%), Gaps = 1/165 (0%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 ++ L + L G + +LP M+ M+A + I + L + +G Sbjct: 26 SMALALALGTAGGLLFAWAKLPLPWMMGAMVATTIASVAG-ANIRVDYRLRTVMIAILGI 84 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G F ++ R I + + + W + D +T+Y A+SPGGL+ Sbjct: 85 MLGSAFQPSLIDRIGEWTITIAGLLVYAIVAGSLCTWYFRKAAGYDAVTSYFASSPGGLN 144 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + ++ D +I + R+ +++T P + + + Y P Sbjct: 145 EMVIVGREMGGDDRIIALTHSARILLVVMTLPFLFQLFTDYTPAA 189 >UniRef50_A8ER15 Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ER15_ARCB4 Length = 361 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 73/341 (21%), Positives = 133/341 (39%), Gaps = 2/341 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAIL 61 +++ + ++++ SI F+ +H P LLG + A I + + P+ A+ ++ Sbjct: 17 LIKMLLALLIAVSGSILFIFLHFPLPWLLGAIFATTIAIRFPTVPISSPKPFSAPARILI 76 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G I T IL + +L ++ TLL + + T GS PGG Sbjct: 77 GLTIGSAFTPHILQYIPHYIISLLLVIPFTLLVIFFGTYYYHKILKYDLKTSYLGSMPGG 136 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG-DNAEAVNQHIVWFPPVS 180 MV + QD AD + MQ R+ FV + + + + D Sbjct: 137 VIEMVIIGQDLKADTSKITLMQSSRLFFVIVSLPFIIQYIFQIDIRGNQILTTPIKDINL 196 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 +L + + LRL + ++ PM+ +L S + +P+ LL + G Sbjct: 197 FEFSYIYILGIAGAIIAKRLRLAAAYLIGPMIVSIILYSTGFVHTHIPDELLKFIQVIFG 256 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 IG F L + L L+ +CA + + + + + LA PGG Sbjct: 257 TIIGFTFKNVSLKTISKTFLATLGHFAILIILCAIFIFIIYKSLDFKALDILLAFGPGGQ 316 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 + ++A A++ I +RLF ++ P IA+ + Sbjct: 317 TEINLVAILIGANLPYITLHHIVRLFIVMNIAPIIAKRLDR 357 Score = 93.7 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 75/162 (46%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 P+ I +LL +L+AV + L P +L + A + + I P+ A A + Sbjct: 15 PILIKMLLALLIAVSGSILFIFLHFPLPWLLGAIFATTIAIRFPTVPISSPKPFSAPARI 74 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 IG IG F IL + +LL I L + + + + D T+YL + P Sbjct: 75 LIGLTIGSAFTPHILQYIPHYIISLLLVIPFTLLVIFFGTYYYHKILKYDLKTSYLGSMP 134 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 GG+ + +I AD + I MQ+ RLF ++++ P I ++I Sbjct: 135 GGVIEMVIIGQDLKADTSKITLMQSSRLFFVIVSLPFIIQYI 176 Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 1/165 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAIL 61 + ++ + +L + +I + L AA L+GPMI II G + +P Q I Sbjct: 196 LFEFSYIYILGIAGAIIAKRLRLAAAYLIGPMIVSIILYSTGFVHTHIPDELLKFIQVIF 255 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G +I L T++ + L + ++ AI +++ + PGG Sbjct: 256 GTIIGFTFKNVSLKTISKTFLATLGHFAILIILCAIFIFIIYKSLDFKALDILLAFGPGG 315 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNA 166 + +A GA++ + +R+ V A ++ + + +N+ Sbjct: 316 QTEINLVAILIGANLPYITLHHIVRLFIVMNIAPIIAKRLDRNNS 360 >UniRef50_C0VNM7 Ammonia monooxygenase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VNM7_9GAMM Length = 354 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 144/343 (41%), Gaps = 1/343 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 L++ + L+ L ++ +HLP LLGP+ + + ++ SA +I+G Sbjct: 5 LKYALSLSLAFLGALVAQWLHLPIPWLLGPLFTTALLKINHAPIECHNSARSIGLSIIGL 64 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + T ++ +A +W ++L LL LL AI ++L R++ + T + S+ GGA Sbjct: 65 TLGLYFTPEMIHLIASHWLVLLIGLLFALLLGAIGAFILQRWAKVDFKTAWFASAIGGAN 124 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 M +A+ Y A + VA LRVL V + M G + +Q Sbjct: 125 EMSHLAEHYQARVDQVASAHTLRVLMVVVIVPFFYQFM-GWHGFDTDQIAKHLEVNWFGF 183 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 +L++ +A + +LP+ +L + + +P ++ + + +GW + Sbjct: 184 FSLVLISYIASRIFIQFKLPNPWTFGALLVAIFFTAQDIHLSAIPTPIIHLGQVLLGWSL 243 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G F A R L + L L + +A+ L ++ + T L +PGG+ + Sbjct: 244 GNKFKPGFFKTAPRYLSIVALCNLGALFLTGLLAYTLMQWTDLPIATLGLGLAPGGVAEM 303 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + A + ++ A +R+ +L T + F K+ Sbjct: 304 TITAKVLQLGVPIVTAFHVVRMVGVLGTVGYLYLFFDKILQKK 346 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 1/165 (0%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 + + L++ LA + V L LP +L P+ A+L+ IE ++ Sbjct: 3 LYLKYALSLSLAFLGALVAQWLHLPIPWLLGPLFTTALLKI-NHAPIECHNSARSIGLSI 61 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 IG +GL F +++ +L+ + L + A A+ L R+ +DF TA+ A++ G Sbjct: 62 IGLTLGLYFTPEMIHLIASHWLVLLIGLLFALLLGAIGAFILQRWAKVDFKTAWFASAIG 121 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 G + ++ +A A + + + TLR+ +++ P +F+ + Sbjct: 122 GANEMSHLAEHYQARVDQVASAHTLRVLMVVVIVPFFYQFMGWHG 166 Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 1/162 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQA 59 + + L ++S + S F+ LP G ++ I F+ + I L +P Q Sbjct: 178 VNWFGFFSLVLISYIASRIFIQFKLPNPWTFGALLVAIFFTAQDIHLSAIPTPIIHLGQV 237 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +LG + T IV L L + ++ + L++++ LP T G +P Sbjct: 238 LLGWSLGNKFKPGFFKTAPRYLSIVALCNLGALFLTGLLAYTLMQWTDLPIATLGLGLAP 297 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 GG A M A+ + +V +R++ V G + Sbjct: 298 GGVAEMTITAKVLQLGVPIVTAFHVVRMVGVLGTVGYLYLFF 339 >UniRef50_P75747 Protein abrB n=117 Tax=Bacteria RepID=ABRB_ECOLI Length = 348 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 348/348 (100%), Positives = 348/348 (100%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI Sbjct: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG Sbjct: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS Sbjct: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG Sbjct: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL Sbjct: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA Sbjct: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 >UniRef50_C6DHB0 Membrane protein AbrB duplication n=5 Tax=Pectobacterium RepID=C6DHB0_PECCP Length = 352 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 174/341 (51%), Positives = 242/341 (70%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P +QWG+L +SL L G H+PAALLLGPM+ G++ + G T+++P F + A+L Sbjct: 6 PWMQWGILLSVSLSLGFGLQVYHVPAALLLGPMMVGVVMGLNGATIRIPPVCFAGSNAVL 65 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 GC++AQ+L+ SILT L WP+VL ILL TL +S + GWLLV++S LPG TG WG+SPGG Sbjct: 66 GCLVAQSLSFSILTPLLNEWPLVLFILLATLAASGLSGWLLVKFSELPGTTGTWGASPGG 125 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+AMVAM+ ++GAD+RLVAFMQYLRVL V +A V R+ LGD A + +VWFP + Sbjct: 126 ASAMVAMSGEFGADVRLVAFMQYLRVLMVTASAAFVARLSLGDEAAENSAMLVWFPSLDW 185 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 L T+ +A + + +R+PSG +L PM+ G++L + + ++ PEWLLA+AY IGW Sbjct: 186 RFLATLGVAFGSAWLARRMRIPSGALLGPMIIGSMLHASGTLHLQTPEWLLALAYAVIGW 245 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +GL F + I L A+R LP ++ SI L+ +C GMAW +T+ M +D +TA+LATSPGGLD Sbjct: 246 SVGLCFTRPIFLLAIRTLPHMMASIVGLMLLCGGMAWMVTKMMPVDMLTAFLATSPGGLD 305 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 ++A+IAAGS DMA ++AMQTLRLFS L+ P ++RFIS Sbjct: 306 SIAIIAAGSRVDMAFVIAMQTLRLFSTLVFSPILSRFISRR 346 Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 54/160 (33%), Gaps = 25/160 (15%) Query: 204 SGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL------------------ 245 S M +L L G + + L + M +G +GL Sbjct: 5 SPWMQWGILLSVSLSLGFGLQVYHVPAALLLGPMMVGVVMGLNGATIRIPPVCFAGSNAV 64 Query: 246 -------GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 IL L P +L + A LA W L +F + T SPG Sbjct: 65 LGCLVAQSLSFSILTPLLNEWPLVLFILLATLAASGLSGWLLVKFSELPGTTGTWGASPG 124 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 G + ++ AD+ L+ MQ LR+ + + +AR Sbjct: 125 GASAMVAMSGEFGADVRLVAFMQYLRVLMVTASAAFVARL 164 >UniRef50_B4AWS0 Membrane protein AbrB duplication n=3 Tax=Cyanobacteria RepID=B4AWS0_9CHRO Length = 400 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 90/346 (26%), Positives = 157/346 (45%), Gaps = 7/346 (2%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCMIAQN 68 V++LL + +P LLGPM+AGI ++++ G LP L AQ I+G + A Sbjct: 41 LVIALLAGWVCSWLKIPVGWLLGPMLAGIAYAIKQGSRQPLPPYFKLIAQIIIGMVTASR 100 Query: 69 LTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAM 128 + + + +L + T S G+LL R++ + TG G PG A+++VAM Sbjct: 101 FSLETVMIAKTYFIPLLLCVCATGGLSMFNGYLLSRWAGIDQATGFLGFIPGAASSIVAM 160 Query: 129 AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG------DNAEAVNQHIVWFPPVSIN 182 +++ GAD VA +QY+RVL V + A + P+ +N Sbjct: 161 SEEMGADAIAVALIQYIRVLLVVLLLPATATFLFPVQLEAQTAANVAATTDLSTLPLYLN 220 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LL+ + + +G L+ PS L P G ++ +IE+P + + +G Sbjct: 221 LLIVAICGGLGIWLGKRLKFPSAGFLGPFFVGLIVFWLLPYSIEIPRSVFNGGLLLLGIS 280 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG+ FD ++ + L+ + + + L IC G+ + ++ TA L +PGG++ Sbjct: 281 IGVQFDWEVARKLLKAVYIEIALVCVLSLICLGIGYEFHVLTGVETSTAILGFTPGGIEA 340 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + D L++AMQ R+ I+L P + F++ A Sbjct: 341 MIATVMQLGGDTGLVLAMQLTRMLGIILIAPWLVGFLAKRVKSSHA 386 Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 85/193 (44%) Query: 147 VLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGT 206 ++F + + + + I P + ++ +++A++AG V L++P G Sbjct: 1 MIFKISLLPDAYVVAYPHSYLQLKEKITVSWPKTQKIIGQLVIALLAGWVCSWLKIPVGW 60 Query: 207 MLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSI 266 +L PMLAG Q LP + +A + IG F + ++ A +LL + Sbjct: 61 LLGPMLAGIAYAIKQGSRQPLPPYFKLIAQIIIGMVTASRFSLETVMIAKTYFIPLLLCV 120 Query: 267 FALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLF 326 A + + L+R+ ID T +L PG ++ ++ AD + +Q +R+ Sbjct: 121 CATGGLSMFNGYLLSRWAGIDQATGFLGFIPGAASSIVAMSEEMGADAIAVALIQYIRVL 180 Query: 327 SILLTGPAIARFI 339 ++L PA A F+ Sbjct: 181 LVVLLLPATATFL 193 Score = 81.0 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 1/178 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAG-IIFSMRGITLQLPRSAFLAAQAILG 62 L ++ + L + P+A LGP G I+F + ++++PRS F +LG Sbjct: 219 LNLLIVAICGGLGIWLGKRLKFPSAGFLGPFFVGLIVFWLLPYSIEIPRSVFNGGLLLLG 278 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I + L I +A++ V L +G+ + + +T G +PGG Sbjct: 279 ISIGVQFDWEVARKLLKAVYIEIALVCVLSLICLGIGYEFHVLTGVETSTAILGFTPGGI 338 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 AM+A G D LV MQ R+L + A + + + V S Sbjct: 339 EAMIATVMQLGGDTGLVLAMQLTRMLGIILIAPWLVGFLAKRVKSSHAPEAVPDSSPS 396 >UniRef50_Q8ET66 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ET66_OCEIH Length = 349 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 77/340 (22%), Positives = 148/340 (43%), Gaps = 7/340 (2%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCMIA 66 + ++ L+ + F + LP LLGP+ +I + I+L I G +I Sbjct: 3 ITFIVGLIGAFIFSVIGLPMPWLLGPLFFVLITQLKAPISLTWHPFFRNIGLVIAGYVIG 62 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 T L + +P+++AI ++ L ++ ++L R S + T PGG ++ Sbjct: 63 YAFTLEALQQMIHFFPLMIAINVLFFLLFLVISFVLSRLSKMNLGTAMTCCVPGGLQQVI 122 Query: 127 AMAQDYGA-DIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLL 185 A++ D+ LV F LRVL + + + + +Q S LL Sbjct: 123 VFAEEQKEMDVTLVTFYHVLRVLVIVSMVPFIVSIQGPNLPVETSQS----EKYSFILLG 178 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 +++A G + L+++P+ +L P+ V +P+ L +A + IG IGL Sbjct: 179 LMIVAYFVGMLFKLIKVPTAYLLGPVFFVMVCNLVGWQVPMMPDSALHIAQLFIGIYIGL 238 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 + + + + LLS ++ G++W + + DF T++L+ PGGLD + + Sbjct: 239 LLKRDSIKKMNKQWMYALLSCVIFVSFALGISWFVKQAY-FDFSTSFLSVVPGGLDQMGI 297 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 IAA AD+ ++ A Q R+ + +++ + Sbjct: 298 IAASVQADVMIVTAFQLFRILFLSALVIPFVQYVVRNKRR 337 Score = 82.2 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 2/159 (1%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCM 64 L +++ + + F + +P A LLGP+ ++ ++ G + +P SA AQ +G Sbjct: 176 LLGLMIVAYFVGMLFKLIKVPTAYLLGPVFFVMVCNLVGWQVPMMPDSALHIAQLFIGIY 235 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 I L + + W L ++ + + + W V+ + +T PGG Sbjct: 236 IGLLLKRDSIKKMNKQWMYALLSCVIFVSFALGISW-FVKQAYFDFSTSFLSVVPGGLDQ 294 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG 163 M +A AD+ +V Q R+LF++ + + ++ Sbjct: 295 MGIIAASVQADVMIVTAFQLFRILFLSALVIPFVQYVVR 333 >UniRef50_B7KIK2 Membrane protein AbrB duplication n=3 Tax=Cyanobacteria RepID=B7KIK2_CYAP7 Length = 389 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 93/346 (26%), Positives = 161/346 (46%), Gaps = 7/346 (2%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCMIAQN 68 L+++ F + +P LLGPM+AGI +++ G L + L Q I+G + A Sbjct: 41 IALAIVAGFVFSGLQVPVGWLLGPMLAGIGYAVIKGSRQPLSPTFKLVGQIIVGLVTASR 100 Query: 69 LTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAM 128 + L + ++ ++ T S G+LL R++ + TG G PG A+++VAM Sbjct: 101 FSPETLLIAKSYFIPLILCVVTTGCLSMFNGYLLSRWAGIDRATGFLGFIPGAASSIVAM 160 Query: 129 AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ------HIVWFPPVSIN 182 +++ GAD VA +QY+RVL V ++ N + H + P+ IN Sbjct: 161 SEEMGADAIAVALIQYIRVLLVVLILPATATILFPVNIDPQTPVTVGITHNLPTLPIVIN 220 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LL+ + +G LLR PS L P + G ++ IE+P +L ++ + +G Sbjct: 221 LLIIAGCGGLGIWLGKLLRFPSAGFLGPFVVGLIVFWLLPYQIEIPRFLFSVGLLLLGIS 280 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG+ FD + L+ + + + L IC G+ + +D +TA L +PGG++ Sbjct: 281 IGVQFDWTVARTLLKAVLIEVGLVIVLSLICLGIGYEFHVVTGVDTVTAILGFTPGGIEA 340 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + D L++AMQ R+ I+L P + F++ A Sbjct: 341 MIATVMQLGGDTGLVLAMQLTRMLGIILIAPWLVSFLAKRAKNSDK 386 Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 78/193 (40%) Query: 147 VLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGT 206 ++F R+ D+ + + I L I LA+VAG V L++P G Sbjct: 1 MVFKISLLPDSYRVAYPDSYSQIKEKIASRWSTLKTPLEKIALAIVAGFVFSGLQVPVGW 60 Query: 207 MLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSI 266 +L PMLAG + L + + +G F + LL A ++L + Sbjct: 61 LLGPMLAGIGYAVIKGSRQPLSPTFKLVGQIIVGLVTASRFSPETLLIAKSYFIPLILCV 120 Query: 267 FALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLF 326 + + L+R+ ID T +L PG ++ ++ AD + +Q +R+ Sbjct: 121 VTTGCLSMFNGYLLSRWAGIDRATGFLGFIPGAASSIVAMSEEMGADAIAVALIQYIRVL 180 Query: 327 SILLTGPAIARFI 339 ++L PA A + Sbjct: 181 LVVLILPATATIL 193 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 1/167 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAG-IIFSMRGITLQLPRSAFLAAQAIL 61 V+ ++ L + P+A LGP + G I+F + +++PR F +L Sbjct: 218 VINLLIIAGCGGLGIWLGKLLRFPSAGFLGPFVVGLIVFWLLPYQIEIPRFLFSVGLLLL 277 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G I ++ TL I + +++V L +G+ + + T G +PGG Sbjct: 278 GISIGVQFDWTVARTLLKAVLIEVGLVIVLSLICLGIGYEFHVVTGVDTVTAILGFTPGG 337 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA 168 AM+A G D LV MQ R+L + A + + + Sbjct: 338 IEAMIATVMQLGGDTGLVLAMQLTRMLGIILIAPWLVSFLAKRAKNS 384 >UniRef50_Q1UZU3 Possible AbrB protein n=4 Tax=root RepID=Q1UZU3_PELUB Length = 367 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 157/340 (46%), Gaps = 1/340 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 ++ ++ ++S+ +I ++P A +LGPM+A + ++ G+ +++P+ A + +LG Sbjct: 29 KFLLVILISIPSAIVADYFNIPLAWMLGPMLAVSVAALSGLKIKMPKLALSSILIVLGLH 88 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 I + +++ + + + + L+S IV L ++S T + ++PG Sbjct: 89 IGNYIDQNLINQMTEWVWTSIIMFVYILISILIVSKYLQKFSGYNVKTSIFSAAPGALGP 148 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 ++ +A+ +D+ VA +R++ + + A + + + +LL Sbjct: 149 LMILAEHEKSDLSQVATSHLIRLIIIITVIPFFVVNYSTNEALTI-EKFNYLDQNHFHLL 207 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 + ++ +++ + + +P+ + ++A +LQ ++ + +LP+ + + +G +G Sbjct: 208 ILLIGSILLIFLFDKIGVPAALLSGTLVASGILQITEVASYKLPDESINFCLLILGASVG 267 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 F + L L++ L+A+ A T F+ +F+T L+ SPGG+ VA Sbjct: 268 CRFADKSLKEVAGNSFHSLVATVILVALGLLAAIVATYFVDTNFLTLLLSFSPGGIYEVA 327 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 VIA + D + +RL IL T P I + I Sbjct: 328 VIAIAFDLDPNFVAFHHIIRLLMILFTVPVILKIIGKKLN 367 >UniRef50_C6CTI7 Membrane protein AbrB duplication n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTI7_PAESJ Length = 370 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 81/353 (22%), Positives = 156/353 (44%), Gaps = 9/353 (2%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILG 62 ++ + ++ I F ++ P LLGPMIA +I + + + P + I+G Sbjct: 12 FKFLITLATAVGGGIIFHLLNTPIPWLLGPMIAVLIGTNVWKGKYRWPGQIRNSGMIIVG 71 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I ++TG+ L + P + + ++ LL + +++ + S T GS PGG Sbjct: 72 YTIGLSMTGTALKEMGEQLPTMCLMTVILLLLCGGIAFVVSKLSDTDFKTALLGSVPGGL 131 Query: 123 AAMVAMAQDY-GADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAE-------AVNQHIV 174 + ++A+A++ G ++ +V Q +R++ + L+ + + Sbjct: 132 SQVLALAEETKGVNLTVVTVTQVVRLMIIVIGIPLLVFSPIFGQVHDAAAAAMPIVAKHD 191 Query: 175 WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 + + N+L+ + V+ G ++ P+ +L P +A AVLQ L LP L + Sbjct: 192 NWAALFPNILIFAPVCVICAIAGNRIKFPTAFLLGPAIATAVLQGIGLHGPSLPSTLTSA 251 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 A + IG +GL L R +R + S L+ G++ +T + TA L+ Sbjct: 252 AQLMIGTYVGLLLKPGKLRRKVRTFSFAIGSGLVLMLCAWGLSELMTLLHPVSRSTALLS 311 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 +PGG+D + ++A NAD++++ Q R F I P + R + K Sbjct: 312 LAPGGMDQMGILAHEINADLSMVSGYQLFRTFFIFFAVPPLLRLLFRIKLKSP 364 Score = 74.1 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 68/171 (39%), Gaps = 1/171 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGC 63 + + ++ +I + P A LLGP IA + G+ LP + AAQ ++G Sbjct: 199 NILIFAPVCVICAIAGNRIKFPTAFLLGPAIATAVLQGIGLHGPSLPSTLTSAAQLMIGT 258 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + L L + + LV +L + + L+ + +T +PGG Sbjct: 259 YVGLLLKPGKLRRKVRTFSFAIGSGLVLMLCAWGLSELMTLLHPVSRSTALLSLAPGGMD 318 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIV 174 M +A + AD+ +V+ Q R F+ A + R++ ++ Sbjct: 319 QMGILAHEINADLSMVSGYQLFRTFFIFFAVPPLLRLLFRIKLKSPRAEQP 369 >UniRef50_C5DA14 Membrane protein AbrB duplication n=2 Tax=Geobacillus RepID=C5DA14_GEOSW Length = 355 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 146/342 (42%), Gaps = 2/342 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAILG 62 ++ +++ L + F +H P +LG + +++ ++ + P++ + +LG Sbjct: 1 MKVLETYIVAGLTGLLFYRLHSPIPWMLGAITGMLVWKTVIKRPVAAPKALSNSGLIVLG 60 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + T L T+A L ++ ++ + I + +++ + T + S PGG Sbjct: 61 TYFGLSFTKETLLTIAPYIVPFLVATVLLIVINIINSIAVTKWTHIDKVTSVFASVPGGL 120 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 + MVA ++ A+ LV Q +R+L V V L +A + + Sbjct: 121 SEMVAASESLNANTALVTIFQTIRLLTVVFLVPTVVVHWLSGDASSGSTTAQAAASSFDG 180 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LL++ + + +P+ ++ P+ AV+ + LP WL+ +A +++G Sbjct: 181 HYTWFLLSIFGALLLRNI-IPAAYVVGPLAVTAVMHVAGVNLPPLPVWLIILAQISVGIN 239 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G + + + L L+A+ G + + TA L+ +PGGL Sbjct: 240 MGERITLEDIKLGGKFSWVYFLLALVLIALSFGFGYVFAELTDLPLSTALLSLAPGGLVE 299 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 + + A D A++ ++Q +RL +++ P + +++ P Sbjct: 300 MVLTAQTVGGDPAIVSSLQFVRLLLVIIVVPNVLKWVFRKFP 341 >UniRef50_C4LFP7 Membrane protein AbrB duplication n=3 Tax=Proteobacteria RepID=C4LFP7_TOLAT Length = 362 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 175/347 (50%), Positives = 243/347 (70%), Gaps = 2/347 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 PV QW +L VLS + + +HLP ALLLGPM+AGI++S+ G TLQ+P + F+AAQAI+ Sbjct: 13 PVFQWILLIVLSAVFAFLMELIHLPGALLLGPMLAGIVWSLHGGTLQVPLNLFVAAQAII 72 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 GC++AQ+++ +L+T A +W + L I+L T+ +S+++GW++ + LPG T WGSSPG Sbjct: 73 GCLVAQSISSGMLSTFAQHWLLFLLIVLSTIAASSLMGWVISKLKVLPGTTAIWGSSPGA 132 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 AAAMV MA+++GAD RLVAFMQYLRV+ VA AA ++ R + D + I+WF P+ Sbjct: 133 AAAMVLMAEEFGADARLVAFMQYLRVIVVASAASVIARFWV-DTSGTTAAAIIWFSPLQW 191 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 T+LLA+ + L R+PSG ML+PM+ G LQS QL+ I+LPEWLL++AY +GW Sbjct: 192 ATAETLLLALAGIIIARLARIPSGAMLVPMILGMALQSSQLMKIDLPEWLLSIAYALMGW 251 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 RIGLGF + +L A R LPQI+LSI L+ C G+AW L H+D +TAYLATSPGG+D Sbjct: 252 RIGLGFTRAVLKHAFRALPQIILSIVLLIGFCGGLAWLLAEHFHLDPLTAYLATSPGGMD 311 Query: 302 TVAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 T+AVIAA S N D+ +MA+QT+RLF ++ GP +AR I+ Sbjct: 312 TIAVIAATSQNVDLEFVMALQTVRLFLVIFLGPVLARLIARKTVTEP 358 Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 1/168 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 +L I+L+ V + L+ LP +L PMLAG V T+++P L A IG Sbjct: 15 FQWILLIVLSAVFAFLMELIHLPGALLLGPMLAGIVWSLHGG-TLQVPLNLFVAAQAIIG 73 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 + +L + LL + + +A + M W +++ + TA +SPG Sbjct: 74 CLVAQSISSGMLSTFAQHWLLFLLIVLSTIAASSLMGWVISKLKVLPGTTAIWGSSPGAA 133 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + ++A AD L+ MQ LR+ + IARF + +A Sbjct: 134 AAMVLMAEEFGADARLVAFMQYLRVIVVASAASVIARFWVDTSGTTAA 181 >UniRef50_Q2CGP3 Possible AbrB protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGP3_9RHOB Length = 355 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 76/343 (22%), Positives = 140/343 (40%), Gaps = 1/343 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 G L + + F LP +LGPMIA + ++ + + P A A++G M Sbjct: 11 NMGFALALGAVAGLLFNWATLPLPWMLGPMIANTLAAVVRLPVASPGRARPYVVAVIGVM 70 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + + I+ + + L + + +S A+V + T + PGG Sbjct: 71 LGAGFSPDIVDQIGLWALSFLFLAVYIAVSGAVVIPYYRKVGGFDLPTAYFAGMPGGLNE 130 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN-L 183 M+ + ++ G D R + R++ V + R++ G + +Q F + + L Sbjct: 131 MMIVGKEMGGDERAIVLAHASRIVVVVALVAVWFRLIQGVDLTDRSQFGTPFADIPAHEL 190 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 L+ ++ VV +G LLRLP+ +L PM+ A + L P+ L+ +A + +G I Sbjct: 191 LVLLVAGVVGFYLGKLLRLPAPMLLGPMIVSAAVHLAGLTDSPPPQELVIVAQVFLGTII 250 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G F R + + + +L + A LA SPGGL + Sbjct: 251 GCRFIGAAPRAIGRAIGLSIGATVLMLVVTFVFAGAFHGLFGQTLEQVLLAYSPGGLAEM 310 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 +++A NAD+A + + R+ I+L P + + Sbjct: 311 SLVALAMNADIAYVASHHLFRISIIVLMAPLLFGVLRRRGRGA 353 Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 1/171 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQA 59 +P + +L V ++ + LPA +LLGPMI + G+T P+ + AQ Sbjct: 185 IPAHELLVLLVAGVVGFYLGKLLRLPAPMLLGPMIVSAAVHLAGLTDSPPPQELVIVAQV 244 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 LG +I G+ + + + ++ L+ + + SP Sbjct: 245 FLGTIIGCRFIGAAPRAIGRAIGLSIGATVLMLVVTFVFAGAFHGLFGQTLEQVLLAYSP 304 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVN 170 GG A M +A ADI VA R+ + A L+ ++ A Sbjct: 305 GGLAEMSLVALAMNADIAYVASHHLFRISIIVLMAPLLFGVLRRRGRGAGE 355 Score = 60.6 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 56/163 (34%), Gaps = 1/163 (0%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 N+ + L VAG + LP ML PM+A + +L P Sbjct: 8 GLANMGFALALGAVAGLLFNWATLPLPWMLGPMIANTLAAVVRLPVAS-PGRARPYVVAV 66 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 IG +G GF I+ + L + A + + D TAY A PG Sbjct: 67 IGVMLGAGFSPDIVDQIGLWALSFLFLAVYIAVSGAVVIPYYRKVGGFDLPTAYFAGMPG 126 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 GL+ + ++ D I+ R+ ++ R I Sbjct: 127 GLNEMMIVGKEMGGDERAIVLAHASRIVVVVALVAVWFRLIQG 169 >UniRef50_Q48HD1 AbrB protein n=9 Tax=Gammaproteobacteria RepID=Q48HD1_PSE14 Length = 362 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 138/345 (40%), Positives = 212/345 (61%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P+ QW L +++ ++PAA+ LGPM+ I F + G T+++P+ AF Q + Sbjct: 14 PLTQWTGLILMAGAAGQLLKLFNMPAAMFLGPMLVAIGFGVSGATIRMPKRAFQLGQGTV 73 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G +IA ++ S+L T +W ++L ++T++ SA VG LLVR+ +P NT AWG+SPG Sbjct: 74 GVLIAHAMSVSVLLTALQSWHVMLLATILTVVLSAAVGLLLVRFGGIPSNTAAWGTSPGA 133 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+AMVAM++DYGAD R+VA MQY+RV+ V LV+ + ++ A Sbjct: 134 ASAMVAMSEDYGADSRVVATMQYVRVVCVVTIGALVSHFIGAPDSGADVHSTAAALHSLN 193 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 + L + LAV+ V RLP+G +L+P++ G LQ ++ I +P+WLL + Y AIG Sbjct: 194 LIDLALSLAVIVTGVALGSRLPAGALLVPLMLGGALQLSGVMQISIPDWLLPVGYGAIGC 253 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +GL FD+ + R LP ++L+ L+ +CA AW + M D+++ YLATSPGGLD Sbjct: 254 YVGLRFDRPTVQYVWRRLPMMILASLLLIVLCALSAWLIAAMMGKDYLSVYLATSPGGLD 313 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 T+A+IA ++AD+ ++AMQTLRLF ++LTG +AR I + KR Sbjct: 314 TMAIIAIDTHADVGFVLAMQTLRLFGVILTGSFLARQIIRLSDKR 358 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 1/179 (0%) Query: 169 VNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELP 228 ++ + IL+A AG + L +P+ L PML TI +P Sbjct: 4 ASRFSLSTLAPLTQWTGLILMAGAAGQLLKLFNMPAAMFLGPMLVAIGFGVSG-ATIRMP 62 Query: 229 EWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDF 288 + + +G I +LL AL+ +LL+ + + A + L RF I Sbjct: 63 KRAFQLGQGTVGVLIAHAMSVSVLLTALQSWHVMLLATILTVVLSAAVGLLLVRFGGIPS 122 Query: 289 MTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 TA TSPG + ++ AD ++ MQ +R+ ++ G ++ FI Sbjct: 123 NTAAWGTSPGAASAMVAMSEDYGADSRVVATMQYVRVVCVVTIGALVSHFIGAPDSGAD 181 >UniRef50_B5ZWF3 Membrane protein AbrB duplication n=9 Tax=Alphaproteobacteria RepID=B5ZWF3_RHILW Length = 367 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 147/341 (43%), Positives = 205/341 (60%), Gaps = 2/341 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR--GITLQLPRSAFLAAQAILG 62 +W +L LS L + LPA+LL+GPM A I+ ++ L++P Q ++G Sbjct: 20 KWALLLALSTALVVFLELFALPASLLIGPMAAAILLALTVGKGKLRIPVWPLQFGQVLVG 79 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 M+A+ +T IL T+A + P+ L + + + +GWLL R+ LPG T WGSSPGGA Sbjct: 80 LMMARTITPDILGTMAKDAPLFLLFIFSVIAIATGLGWLLTRWQVLPGTTAVWGSSPGGA 139 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 +AMV M++ YGAD RLVAFMQYLRV+FVA A +++R+ + + I++ Sbjct: 140 SAMVIMSEAYGADARLVAFMQYLRVVFVAVGASVISRLWVAADGAEPPPLILFPEVDWPA 199 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 TI A + LR+ GT+++P+ GA LQ L+ IELP WLLA+AY +GW Sbjct: 200 FAATIAFAGLCAYGVRRLRIQGGTIIVPLFLGAFLQGVGLLKIELPMWLLAIAYALVGWS 259 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGL F + IL R LP++ I L+A+C MA L F ID +TAYLATSPGG D+ Sbjct: 260 IGLRFTRSILEHVARALPRVSACIVLLMALCGCMAAALHIFAGIDPLTAYLATSPGGADS 319 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 VA+IAA S+ D+ +MAMQT R ILL GP +ARFI+ + Sbjct: 320 VAIIAASSDVDVPFVMAMQTGRFLIILLIGPTLARFIARRS 360 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 1/170 (0%) Query: 171 QHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSG-QLITIELPE 229 + L + L+ L LP+ ++ PM A +L + +P Sbjct: 9 ARRLLRDAGLPKWALLLALSTALVVFLELFALPASLLIGPMAAAILLALTVGKGKLRIPV 68 Query: 230 WLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFM 289 W L + +G + IL + P LL IF+++AI G+ W LTR+ + Sbjct: 69 WPLQFGQVLVGLMMARTITPDILGTMAKDAPLFLLFIFSVIAIATGLGWLLTRWQVLPGT 128 Query: 290 TAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 TA +SPGG + +++ AD L+ MQ LR+ + + I+R Sbjct: 129 TAVWGSSPGGASAMVIMSEAYGADARLVAFMQYLRVVFVAVGASVISRLW 178 Score = 67.5 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 1/172 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQA 59 + + + L + G + + ++ P+ G G+ ++LP A A Sbjct: 195 VDWPAFAATIAFAGLCAYGVRRLRIQGGTIIVPLFLGAFLQGVGLLKIELPMWLLAIAYA 254 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G I T SIL +A P V A +++ + + L ++ + T +SP Sbjct: 255 LVGWSIGLRFTRSILEHVARALPRVSACIVLLMALCGCMAAALHIFAGIDPLTAYLATSP 314 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ 171 GGA ++ +A D+ V MQ R L + + R + + A N Sbjct: 315 GGADSVAIIAASSDVDVPFVMAMQTGRFLIILLIGPTLARFIARRSGLAENP 366 >UniRef50_C8SMW8 Membrane protein AbrB duplication n=5 Tax=cellular organisms RepID=C8SMW8_9RHIZ Length = 366 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 149/343 (43%), Positives = 217/343 (63%), Gaps = 1/343 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 QW +L +S L + LPAALL+GPM+A I G T+++PR F +AQAI+G Sbjct: 23 PWQWLVLLTISALFAGALELAALPAALLIGPMLAAIAAGTNGATVRVPRLLFGSAQAIVG 82 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 C++A +++ I WP+ L ++ T+ +S+++GWL+ R+ LPG T WGSSPG A Sbjct: 83 CLVAASISADIFPVFYREWPLFLGAVVATVAASSLLGWLISRWRILPGTTAVWGSSPGAA 142 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 AMV MA +GAD RLVAFMQYLRV+FV+ A LV +M + + + + + P + Sbjct: 143 TAMVLMAGAFGADQRLVAFMQYLRVIFVSVTAALVAKMWVDTSGIEIPPIVWFPPIDAQA 202 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 TI +A+V G G L RLPS L + G V+ G + ++LP WLLA++Y +GW Sbjct: 203 FAATIGIAIVGGLAGKLCRLPSPFFLGTFIFGTVIHLGLGVEMQLPPWLLAVSYAMVGWS 262 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGL F + IL A R LPQI+ SI AL+A C G+A+ ++ + ID +TAYLATSPGG+D+ Sbjct: 263 IGLNFTRPILRHATRALPQIIASIVALIAFCGGLAFLISHLLGIDPLTAYLATSPGGMDS 322 Query: 303 VAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 VA+IAA + N D++ +MA+Q+ R +LL GP++AR ++ Sbjct: 323 VAIIAAAARNVDISFVMALQSARFLVVLLVGPSVARLVARSIR 365 >UniRef50_C3KNJ9 Possible monooxygenase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNJ9_RHISN Length = 362 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 68/334 (20%), Positives = 136/334 (40%), Gaps = 1/334 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P + + + + F HLP +LG ++A ++ S+ + + +P ++ Sbjct: 14 PYRKLLLALAIGFIGGCIFFYFHLPLPWMLGSLVACLVASLFNMPVAVPGIVRPPMLMLV 73 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G ++ T ++ ++ P + +++ +L++ R T + PGG Sbjct: 74 GVVLGSGFTPAMAGSMIDWLPGLGILMVFVVLTAGCSYVYFRRVGGFDHWTAFFSGMPGG 133 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 M A+ YGA+ R +A + R++ V V ++ G +++ I Sbjct: 134 LVEMTALGDAYGANTRAIALVHSSRIMLVVLTLPFVLTVVGGQTLAGISRSGASVLEAPI 193 Query: 182 NL-LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 + L + +G LL +PS ++ PMLA A + L P ++A A + +G Sbjct: 194 SAELWLFGTGLCGAVLGRLLSMPSPFLMGPMLASAAVHLTGLSAFHAPWEIIAFAQLVLG 253 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 +G F L L + S L+A A ++ ++ LA SPGGL Sbjct: 254 SALGCSFAGVKKSSILHILRLSVGSTAFLVAASTSCALLVSHLTGSPILSLLLAYSPGGL 313 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPA 334 +++A + D+A + LR+F + ++ Sbjct: 314 TETSLMALSLHVDVAFVATHHVLRVFFVAVSATF 347 Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 63/171 (36%), Gaps = 1/171 (0%) Query: 171 QHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEW 230 LLL + + + G + LP ML ++A V + + +P Sbjct: 6 GRFAPSKFPYRKLLLALAIGFIGGCIFFYFHLPLPWMLGSLVACLVASL-FNMPVAVPGI 64 Query: 231 LLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMT 290 + M +G +G GF + + LP + + + ++ R D T Sbjct: 65 VRPPMLMLVGVVLGSGFTPAMAGSMIDWLPGLGILMVFVVLTAGCSYVYFRRVGGFDHWT 124 Query: 291 AYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 A+ + PGGL + + A+ I + + R+ ++LT P + + Sbjct: 125 AFFSGMPGGLVEMTALGDAYGANTRAIALVHSSRIMLVVLTLPFVLTVVGG 175 >UniRef50_A5TXE3 Possible ammonia monooxygenase n=8 Tax=Fusobacterium RepID=A5TXE3_FUSNP Length = 363 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 130/335 (38%), Gaps = 12/335 (3%) Query: 16 LSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILT 75 +PAA +LG + IF++ LP Q G I + Sbjct: 28 GGYLADKKKVPAAYMLGALFLVAIFNIFFNKAFLPNYFKFLTQIATGTFIGSKFRSEDVK 87 Query: 76 TLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGAD 135 L + ++++ ++ S I+ +L+ + + T + ++PGG + +A D+ A+ Sbjct: 88 MLKKVIIPGMTMVVLMIIFSFILSYLMSTFLGIDNLTSFFATAPGGIMDISLIAYDFKAN 147 Query: 136 IRLVAFMQYLRVLFVAGAAVLVTR-----------MMLGDNAEAVNQHIVWFPPVSINLL 184 VA +Q +R++ V T+ + + + + + L Sbjct: 148 TSQVALLQLIRLISVISFVPFFTKKCYERSKKKNISLEQEIKNEIREEEKVEDKSEKSFL 207 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 TI++ ++ G +G LP+GTM M A + +P L + G IG Sbjct: 208 FTIIVGIIGGIIGYFSHLPAGTMSCSMALVAYFNV-ETHKAYMPLTLRKIIQSFGGALIG 266 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 ++ + I+L I + + + L + TA L+ SPGG+ ++ Sbjct: 267 AKVTLSDVIALKDLVFPIILIIIGFCLMNVFVGFFLYKTTKFSLSTALLSASPGGMSDIS 326 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 ++A A+ + +MQ LR I+ P I + + Sbjct: 327 LMAEDLGANGPQVASMQFLRAIFIVGVYPIIIKIL 361 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 71/154 (46%), Gaps = 1/154 (0%) Query: 193 AGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQIL 252 G + ++P+ ML + A+ LP + + +A G IG F + + Sbjct: 28 GGYLADKKKVPAAYMLGALFLVAIFNIFFNKAF-LPNYFKFLTQIATGTFIGSKFRSEDV 86 Query: 253 LRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNA 312 + + + + ++ +++ ++ F+ ID +T++ AT+PGG+ +++IA A Sbjct: 87 KMLKKVIIPGMTMVVLMIIFSFILSYLMSTFLGIDNLTSFFATAPGGIMDISLIAYDFKA 146 Query: 313 DMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + + + +Q +RL S++ P + + K+ Sbjct: 147 NTSQVALLQLIRLISVISFVPFFTKKCYERSKKK 180 Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 73/158 (46%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 + ++ ++ I HLPA + M F++ +P + Q+ G + Sbjct: 205 SFLFTIIVGIIGGIIGYFSHLPAGTMSCSMALVAYFNVETHKAYMPLTLRKIIQSFGGAL 264 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 I +T S + L ++ I++ L + VG+ L + + +T +SPGG + Sbjct: 265 IGAKVTLSDVIALKDLVFPIILIIIGFCLMNVFVGFFLYKTTKFSLSTALLSASPGGMSD 324 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 + MA+D GA+ VA MQ+LR +F+ G ++ +++ Sbjct: 325 ISLMAEDLGANGPQVASMQFLRAIFIVGVYPIIIKILF 362 >UniRef50_Q2BDN3 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BDN3_9BACI Length = 362 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 84/347 (24%), Positives = 152/347 (43%), Gaps = 6/347 (1%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILGCM 64 + ++L I F +HLP LLG + A + S L+ PR A ++G Sbjct: 10 FLAAFFIALAGGIIFTLLHLPIPWLLGSLTAILAASRFIPFKLEWPRKLRDAGILMVGYS 69 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 I T ++ ++ P +LA+ L+T+ S ++ ++ R S + T GS PGG + Sbjct: 70 IGLTFTKDAVSQMSGKLPSMLAMTLLTIAFSVLLAVIVSRISGIDFPTVLTGSIPGGLSQ 129 Query: 125 MVAMAQD-YGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 M+ A++ G D+ V F+Q R+L + + L + P L Sbjct: 130 MLVFAEESEGIDLTTVTFLQVARLLMIVFFVPFLVLGPLLSGEAGPAAILQEEIPQWSAL 189 Query: 184 LLTIL----LAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 ++ ++ +G LRLP+ +L P++A A++ LP LL ++ I Sbjct: 190 FPAVIPFIFASLAGAYLGKKLRLPTPYLLGPIVATALMGIYFTRGPALPPSLLDLSQFFI 249 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G IGL + L + + LLS L+ + ++ L + T++L+ +PGG Sbjct: 250 GGHIGLLMRPEKLHHKTKTISLALLSGALLIGLSLLLSILLAFEYDLSSATSFLSLAPGG 309 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 +D + ++A +AD+A + Q R+F I P R+ ++ Sbjct: 310 MDQMGILAHEVHADLATVTGYQLFRIFFIFFAVPPALRWYFRLRTRK 356 Score = 91.8 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 1/156 (0%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 L +A+ G + LL LP +L + A +E P L + +G+ Sbjct: 9 GFLAAFFIALAGGIIFTLLHLPIPWLLGSLTAILAASRFIPFKLEWPRKLRDAGILMVGY 68 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 IGL F K + + LP +L +A +A ++R IDF T + PGGL Sbjct: 69 SIGLTFTKDAVSQMSGKLPSMLAMTLLTIAFSVLLAVIVSRISGIDFPTVLTGSIPGGLS 128 Query: 302 TVAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIA 336 + V A S D+ + +Q RL I+ P + Sbjct: 129 QMLVFAEESEGIDLTTVTFLQVARLLMIVFFVPFLV 164 >UniRef50_Q11GX1 Putative ammonia monooxygenase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11GX1_MESSB Length = 369 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 146/341 (42%), Positives = 210/341 (61%), Gaps = 1/341 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P QW +L +LS+ L+ + PAA LLGPM + + + G ++++P F+A+Q ++ Sbjct: 25 PARQWLLLILLSVGLACVLKLLQFPAAALLGPMFSAAVLGINGASIRVPSLPFVASQGVI 84 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G +IA + ++L LA WP+VL +++ T+L+S+ +GW++ R+ LPG+T WGS+PG Sbjct: 85 GILIAMAIEPAVLVGLADKWPLVLVVVVSTVLASSFLGWMISRWGILPGSTAVWGSAPGA 144 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A AMV MA +GAD RLVAFMQYLRV+ VA AA ++ ++ A I + Sbjct: 145 ATAMVLMAAAFGADQRLVAFMQYLRVMMVALAAAVIASIVATGPEAASEGTIWFPQLDWP 204 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 +T+ +A + +G LL LPS L M+ G L G +LP WLL AY IGW Sbjct: 205 AFPVTVFVAAIGAVLGWLLGLPSPFFLGSMILGVALHLGTGFQFQLPPWLLVAAYTFIGW 264 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 IGL F + I ALR LPQI+ SI AL+ C G+A L + + ID ++AYLATSPGG+D Sbjct: 265 TIGLNFTRTIARHALRALPQIIGSILALMVFCGGLALLLNQILGIDLLSAYLATSPGGMD 324 Query: 302 TVAVIAAGSN-ADMALIMAMQTLRLFSILLTGPAIARFIST 341 ++A+IAA SN +M+ IM MQ R +LL GPAIAR ++ Sbjct: 325 SIAIIAAASNDVNMSFIMTMQMARFLFVLLFGPAIARLVAG 365 >UniRef50_A1HS75 Putative ammonia monooxygenase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS75_9FIRM Length = 357 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 3/340 (0%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCMIAQ 67 + ++ F H+P LGPM+A +++ + P+ +LG ++ Sbjct: 8 VFFVACAGGALFSFSHIPLPWTLGPMVAAVLWKTWLKKPVYWPKKMRNIGMLVLGYVMGS 67 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 T + P +LA L+ ++ +L R + + G PGG + M Sbjct: 68 PFTPETGHQIIGQLPTMLAATLLIVVVCLATSYLAGRVTGIGTANSLIGGMPGGLSQMAM 127 Query: 128 MAQDY-GADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT 186 + ++ G D+ +V MQ +R+L V V + D AV V I +L Sbjct: 128 ICEETKGTDVSVVTIMQTIRLLTVVFTVPFVALHGIADKTSAVKPQAVPITIQDIPMLCV 187 Query: 187 ILLAVVAGTVG-CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 +A+ +R PS ++ P+L A L + LP ++A A + +G ++GL Sbjct: 188 FFVAITCAISFIKHIRFPSPYVIGPVLGTAALTLAGIHAPVLPPPVIAAAQILVGIKMGL 247 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 + L S+ A + + G A+ + I +T +++ +PGG+ +A+ Sbjct: 248 DLEVTRLSNWRTIALSSFASVIAAIFLLLGAAYLFSLLTSIPLITVFISMAPGGMSEMAL 307 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 A +NAD++ ++A Q RL IL+ AR+ + + Sbjct: 308 TAMIANADLSTVVAYQLFRLLFILVVAVPTARWWLSRNEQ 347 >UniRef50_B9R4Z7 Putative ammonia monooxygenase superfamily n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R4Z7_9RHOB Length = 367 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 142/346 (41%), Gaps = 3/346 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 + ++ +++ F LPAA L G MI ++ G+ +P +L Sbjct: 8 TLWKFPATLAIAVAGGAVFHLAGLPAAWLSGAMILVAAATLAGVPTVMPNKFRDGLFVLL 67 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + + ++ ++ + +LLV + + +L + T +G+ PG Sbjct: 68 GISMGAGVQPEVVERVSEWPLSMAMLLLVVVGVTIAGYCVLRYAAHWQKETAFFGAIPGT 127 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A ++A+A + AD+ +A Q +R+ F+ +A Sbjct: 128 LAYVIALASERRADLPRIASTQSVRLFFLIALLPFAVVSTTDTDASITVSRYTSD---LW 184 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 + + + L ++ + +R P G M A L + + + LPE ++ + +A+G Sbjct: 185 DYAIGVPLCILGSLLAVKVRFPGGWMTGAFFTSAGLNASGAVHLVLPESIVLICMVAMGA 244 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 IG F++ + L + + A ++ A ++ + I F A LA +PGGL+ Sbjct: 245 LIGCRFNEMTFREFVSVLSASVSAFAAAFSVSVAGAGFVSWMIDIPFGQALLAFAPGGLE 304 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 + ++A + D A + A Q +R ++L PAI AP+ S Sbjct: 305 VMTLMAFVLDLDPAFVAAHQIVRFTGMVLLLPAITLITIGRAPQSS 350 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 1/181 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAIL 61 + + + L +L S+ + V P + G + G L LP S L + Sbjct: 183 LWDYAIGVPLCILGSLLAVKVRFPGGWMTGAFFTSAGLNASGAVHLVLPESIVLICMVAM 242 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G +I ++ S + +P +PGG Sbjct: 243 GALIGCRFNEMTFREFVSVLSASVSAFAAAFSVSVAGAGFVSWMIDIPFGQALLAFAPGG 302 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 M MA D VA Q +R + +T + +G ++ + + Sbjct: 303 LEVMTLMAFVLDLDPAFVAAHQIVRFTGMVLLLPAITLITIGRAPQSSDATGHTSTIATP 362 Query: 182 N 182 + Sbjct: 363 D 363 >UniRef50_A9BSE8 Membrane protein AbrB duplication n=8 Tax=Burkholderiales RepID=A9BSE8_DELAS Length = 364 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 79/354 (22%), Positives = 144/354 (40%), Gaps = 10/354 (2%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 +L+ + + + + L + P +LGP+IA + S+ G Q I+G Sbjct: 9 LLRIALTLLGAFAAAQLCLWLRTPLPWMLGPLIATSLASILGAPTASAGRLRNGGQWIIG 68 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRY---------SSLPGNTG 113 + T +++ +A W + ++ LL G L R + T Sbjct: 69 ASLGLYFTPAVVQLIAGLWWAIAVAIVWALLLGWGFGAWLYRVHAPRMPQIPAGEMRATT 128 Query: 114 AWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHI 173 + + G A+ M +A+ A LVA LR++ V + + E + Sbjct: 129 YFAGAIGAASEMTLLAERENARTDLVAASHSLRLVIVTVSIPFALQWSGLHGLEGLTPPS 188 Query: 174 VWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLA 233 + L L +L + L+ + L +L +L +P+ L+ Sbjct: 189 I-RIVEWPGLALLAVLTGLGAWAMDRLKRANPWFLGALLVSMLLTMCGQELSAVPQALVN 247 Query: 234 MAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 +A + IG +G+ F ++ L A R L + + L+AICAG AW L + + ++T L Sbjct: 248 VAQLVIGISLGVRFKREFLHTAPRWLGSVAVGTVGLMAICAGFAWLLHLAVDLPWVTLLL 307 Query: 294 ATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 TSPGG+ +A+ A + ++ A Q RL ++LL + R++ P S Sbjct: 308 GTSPGGITEMAITAKVLQLGVPVVTAFQVCRLIAVLLLVAPLFRWVEARGPAAS 361 Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 62/173 (35%), Gaps = 1/173 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQA 59 + +L VL+ L + + LG ++ ++ +M G L +P++ AQ Sbjct: 192 VEWPGLALLAVLTGLGAWAMDRLKRANPWFLGALLVSMLLTMCGQELSAVPQALVNVAQL 251 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G + L T V + + A WLL LP T G+SP Sbjct: 252 VIGISLGVRFKREFLHTAPRWLGSVAVGTVGLMAICAGFAWLLHLAVDLPWVTLLLGTSP 311 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH 172 GG M A+ + +V Q R++ V + R + A Sbjct: 312 GGITEMAITAKVLQLGVPVVTAFQVCRLIAVLLLVAPLFRWVEARGPAASRTA 364 Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 10/171 (5%) Query: 177 PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 P + + LT+L A A + LR P ML P++A ++ T L Sbjct: 6 PIFLLRIALTLLGAFAAAQLCLWLRTPLPWMLGPLIATSLASILGAPTASA-GRLRNGGQ 64 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRF---------MHID 287 IG +GL F ++ I ++I L + G L R Sbjct: 65 WIIGASLGLYFTPAVVQLIAGLWWAIAVAIVWALLLGWGFGAWLYRVHAPRMPQIPAGEM 124 Query: 288 FMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 T Y A + G + ++A NA L+ A +LRL + ++ P ++ Sbjct: 125 RATTYFAGAIGAASEMTLLAERENARTDLVAASHSLRLVIVTVSIPFALQW 175 >UniRef50_C9S1X9 Membrane protein AbrB duplication n=5 Tax=Geobacillus RepID=C9S1X9_GEOSY Length = 384 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 157/340 (46%), Gaps = 5/340 (1%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILGC 63 + + V++ L F +P +LGP A ++ L P AA +G Sbjct: 14 RIALTLVIAALGGFIFALFGVPLHWMLGPAAALLLVGRFWKGKLYWPVGIRNAALIPIGY 73 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + ++T L + P++L ++ LL S +V L+ R++ +P + GS PGG + Sbjct: 74 TLGTSMTAGTLVEMGRQLPVMLLATVLILLFSFLVSCLVARWTRIPLRSVVTGSIPGGLS 133 Query: 124 AMVAMAQDY-GADIRLVAFMQYLRVLFVAGAAVLVT---RMMLGDNAEAVNQHIVWFPPV 179 M+ + ++ G D +V F Q +R++ V L+ G A + Sbjct: 134 QMLVLGEELDGVDATIVTFFQVMRLMGVVFLVPLIVLSPFFSGGAEAGTGAESGQEAHWS 193 Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 + L +++ V + +G ++LP+ +L P++ + L LP LL +A +A+ Sbjct: 194 VGLVWLYVIVTVASAIIGRRIKLPTAYLLGPIIGTSALVMAGTPAPHLPAPLLDIAQIAM 253 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G +GL + R + + + AL+ A+ LT + ++TA++A +PGG Sbjct: 254 GAYLGLMLKPARIAEKGRAVLAAVATGLALILFSMASAFVLTVLHGVPYLTAFIALAPGG 313 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 +D + ++A ++AD+A++ + Q R+F ILL P + + Sbjct: 314 MDQMGILAREAHADLAVVTSYQMFRIFFILLVVPPVLKKW 353 >UniRef50_C6JLU4 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C6JLU4_FUSVA Length = 357 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 142/358 (39%), Gaps = 19/358 (5%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 + + + + L+ + L +PA ++G + A IFS+ LP+S + AQ G Sbjct: 1 MWFFITFFVGLIGAGIALKYKVPAGAMIGSLFAVAIFSVVTGKAYLPQSYKIIAQISTGA 60 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I + + + L + ++++ L + ++G+ L S + T + ++PGG Sbjct: 61 FIGARIKYNDIIELKKVFKPAAIMVILMALINFVMGYFLYSSSDIDMKTALFCTAPGGIM 120 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIV--------- 174 M +A D+GAD VA MQ +R++ V + + ++ Sbjct: 121 DMTLIAYDFGADTSKVAVMQMMRLISVMCLIPWLIKGVIKYYKSKSPAEETENLKSSKET 180 Query: 175 ---------WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITI 225 F +++T+ + V++G G + +P+G M + M A Sbjct: 181 ISEKKKEKIPFMEDLKKIIITMTIGVISGFAGYYVGIPAGAMSVSMAGVAAYNIKSNKAF 240 Query: 226 ELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMH 285 +P L + G IG +L +++ I + + + + Sbjct: 241 -MPIKLRQFIQVLGGALIGAKMTMGDILGMKTIAIPVIIVISGFCLMNLILGIMVYKISD 299 Query: 286 IDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 + T+ + +PGG+ +A+IA AD + MQ +RL ++ P + + I Y Sbjct: 300 FNIPTSMFSAAPGGISDIAIIAGELGADTPKVAVMQFIRLVCVIAFYPILIKIIVQYF 357 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 1/167 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 + +T + ++ + ++P+G M+ + A A+ LP+ +A ++ G Sbjct: 1 MWFFITFFVGLIGAGIALKYKVPAGAMIGSLFAVAIFSVVTGKAY-LPQSYKIIAQISTG 59 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 IG ++ + + + + I M + L ID TA T+PGG+ Sbjct: 60 AFIGARIKYNDIIELKKVFKPAAIMVILMALINFVMGYFLYSSSDIDMKTALFCTAPGGI 119 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 + +IA AD + + MQ +RL S++ P + + + Y +S Sbjct: 120 MDMTLIAYDFGADTSKVAVMQMMRLISVMCLIPWLIKGVIKYYKSKS 166 >UniRef50_Q167T9 Putative uncharacterized protein n=7 Tax=Rhodobacterales RepID=Q167T9_ROSDO Length = 365 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 70/337 (20%), Positives = 134/337 (39%), Gaps = 1/337 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 L++ V +L + F + LP L+GP+ A + ++ G ++ A + ILG Sbjct: 24 ALRYVTPFVFALSGAWLFHVLDLPLPWLIGPIAACLAAALMGFKMRAIAPVNAAMRTILG 83 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + T +IL+ + W +L I ++ +A+ + T + + PGG Sbjct: 84 VAVGATFTPAILSLMVDMWVTLLLIPVMICCVAAVGVPYFQKLWGYDFATSYYSAMPGGL 143 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 M+ ++ G + R ++ + R+L + A + + + + Sbjct: 144 QDMLVFGEEAGGNPRTLSLIHATRILVIVTALPFLLQSFWSADL-STPPGAPLTSIAPGQ 202 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L + ++ A + + L+ L ++L PM+ +++ + P + A IG Sbjct: 203 LTVMLICAALGWYLANLVGLFGASILGPMIFAGAAAVTEVLIVRPPAEAIWAAQFFIGMT 262 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G+ + L L L LL I + A LA +PGG Sbjct: 263 VGVKYSGITLDEVRHDLAAGLGYCVVLLLITFVFVEIVYIAGLAPGREALLAFAPGGQAE 322 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 +AV+A ADMA ++A R+ I++ P ARF Sbjct: 323 MAVLALIVGADMAFVIAHHVFRIIVIIIGAPLFARFF 359 Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 1/160 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGC 63 Q ++ + + L V L A +LGPMI ++ + + + P A AAQ +G Sbjct: 202 QLTVMLICAALGWYLANLVGLFGASILGPMIFAGAAAVTEVLIVRPPAEAIWAAQFFIGM 261 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + +G L + + L +V LL + + ++ PG +PGG A Sbjct: 262 TVGVKYSGITLDEVRHDLAAGLGYCVVLLLITFVFVEIVYIAGLAPGREALLAFAPGGQA 321 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG 163 M +A GAD+ V R++ + A L R Sbjct: 322 EMAVLALIVGADMAFVIAHHVFRIIVIIIGAPLFARFFGA 361 >UniRef50_Q223M5 Putative ammonia monooxygenase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q223M5_RHOFD Length = 355 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 149/345 (43%), Positives = 211/345 (61%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 M L W +L ++S +L A+HLPA +LLG M+AGI+ S + I L +P + F AQ + Sbjct: 9 MTALWWSVLLLISAVLGWALTALHLPAGVLLGCMLAGIVLSSQEIRLGIPTTLFALAQGV 68 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +GC++A++L S L +A +WPI L + +SA +GWLL+ PG T WG +PG Sbjct: 69 VGCLMAKSLQPSTLAKVASDWPIFLGATFSIVAASAALGWLLMHRQVFPGTTAVWGLAPG 128 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 A+AMV MA+ YGAD+RLVAFMQYLRV V A LV A + + Sbjct: 129 AASAMVLMAEAYGADVRLVAFMQYLRVAVVTAVAALVAHFWTTRAAPMTPEVHWFAVINP 188 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 +L T+LLA ++ L +P G M++P++ GA LQ+ + IELP LLA++Y IG Sbjct: 189 GDLGWTLLLAFAVSSIAGWLHIPGGPMVVPLVLGAALQAMGWLVIELPPALLAVSYAVIG 248 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 W IGL F + IL ALR LP +L SIFAL+ + +A GLT++ D +TAYLA+SPGG Sbjct: 249 WSIGLRFTRAILRHALRALPAVLGSIFALMGVGLVIAVGLTQWAGHDPLTAYLASSPGGA 308 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 D+VA+IAA S D +MAMQ R +L+ GP +++F++T + Sbjct: 309 DSVAIIAATSAVDAGFVMAMQLARFLMVLVLGPRVSKFVATQSRT 353 Score = 67.9 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 1/172 (0%) Query: 172 HIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 + ++ + +L++ V G L LP+G +L MLAG VL S ++ + +P L Sbjct: 3 ASPFRAMTALWWSVLLLISAVLGWALTALHLPAGVLLGCMLAGIVLSSQEIR-LGIPTTL 61 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 A+A +G + L + P L + F+++A A + W L TA Sbjct: 62 FALAQGVVGCLMAKSLQPSTLAKVASDWPIFLGATFSIVAASAALGWLLMHRQVFPGTTA 121 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 +PG + ++A AD+ L+ MQ LR+ + +A F +T A Sbjct: 122 VWGLAPGAASAMVLMAEAYGADVRLVAFMQYLRVAVVTAVAALVAHFWTTRA 173 >UniRef50_B6ALI3 Putative ammonia monooxygenase n=2 Tax=Leptospirillum sp. Group II RepID=B6ALI3_9BACT Length = 345 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 130/332 (39%), Positives = 199/332 (59%), Gaps = 1/332 (0%) Query: 15 LLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSIL 74 +L+ FLAVHLP AL+LGPMIA I+F + TL++ R F +Q ++GCM+AQ L S+L Sbjct: 1 MLAFLFLAVHLPGALMLGPMIAAIVFGVSRSTLRVHRVPFSFSQGVVGCMVAQALKPSVL 60 Query: 75 TTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGA 134 + ++++ ++ + +GWLL R PG T WG PG A++MV MA+ YGA Sbjct: 61 HAFWQRGLLFASLVVAIIVFNCALGWLLSRAKIFPGTTAVWGLLPGAASSMVIMAEAYGA 120 Query: 135 DIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAG 194 D+RLVAF+QYLRV+ V A V L + L T+ + + Sbjct: 121 DVRLVAFIQYLRVVMVGFLASGVAHFSLHHALTGKVFLWFPR-FSPLALGETMAIVLAGM 179 Query: 195 TVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 +G R+P G +LIP++AG+VL++ +I+I LP WLLA AY+ IGW +GL F + +L Sbjct: 180 GIGSFFRIPGGMLLIPLIAGSVLEAAGMISIVLPGWLLAGAYLCIGWMVGLRFQRDVLSS 239 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 R +P+ + + ++A C + + L RF+ +D +TAYLATSPGG+D VA+IAA +N + Sbjct: 240 VARMIPRTIFVLLVVIAFCGFLGFLLNRFLGVDPLTAYLATSPGGVDAVAIIAASANVKI 299 Query: 315 ALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 +MAMQ R+ ++L GP +++++ P Sbjct: 300 GFVMAMQLSRMMMVVLIGPVFSKWVANRVPSP 331 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 1/182 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAI 60 L G + L +P +LL P+IAG + G+ ++ LP A Sbjct: 164 SPLALGETMAIVLAGMGIGSFFRIPGGMLLIPLIAGSVLEAAGMISIVLPGWLLAGAYLC 223 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G M+ +L+++A P + +LLV + +G+LL R+ + T +SPG Sbjct: 224 IGWMVGLRFQRDVLSSVARMIPRTIFVLLVVIAFCGFLGFLLNRFLGVDPLTAYLATSPG 283 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 G A+ +A I V MQ R++ V + ++ + Q V S Sbjct: 284 GVDAVAIIAASANVKIGFVMAMQLSRMMMVVLIGPVFSKWVANRVPSPGVQRPVPKSEPS 343 Query: 181 IN 182 + Sbjct: 344 EH 345 >UniRef50_Q7D1Z3 Putative uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D1Z3_AGRT5 Length = 348 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 69/330 (20%), Positives = 144/330 (43%), Gaps = 3/330 (0%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 + + ++ + ++ +H+PA L GP +A I + G+ L +P A ++G + Sbjct: 10 FALTALVGSMGALLASLLHIPAPFLSGPALAVTITGLAGVKLGIPAFIRNACFVVVGISM 69 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 ++T S++ + +L+ ++ + W+L T G+SPG + + Sbjct: 70 GTSVTPSVIDAAKTWPLSFIVVLVAVVIMLYVAYWILHYGFGYDRTTAMLGASPGHLSYI 129 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLL 185 +++ + +D+ V+ +Q +RVL + + L+ + + I P L L Sbjct: 130 ISLGAETKSDLATVSIVQSVRVLALTLSVPLIVEYF---DLVSTEPLITNPPMGFFTLAL 186 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 TI +++ G + + P+ +L + L +P WL Y+ IG IG Sbjct: 187 TIAASLLTGWLFLRWKFPAALLLGGVAISIGTHITGLTEGGVPSWLSLPVYVLIGCLIGT 246 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 F L+ + + A++ I +AW ++R + +A +PGGL+T+A Sbjct: 247 RFSNVSLMEVRKGFLAGFVVTIAVMVIAGTIAWLISRVTGVPLNAVMIAYAPGGLETMAA 306 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAI 335 +A +AD A + + +RL + + P + Sbjct: 307 MAVMMHADTAYVGSHHVIRLLFLSVLMPLV 336 Score = 61.4 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 1/160 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQA 59 M + SLL FL PAALLLG + I + G+T +P L Sbjct: 179 MGFFTLALTIAASLLTGWLFLRWKFPAALLLGGVAISIGTHITGLTEGGVPSWLSLPVYV 238 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++GC+I + L + + + + ++ + + WL+ R + +P N +P Sbjct: 239 LIGCLIGTRFSNVSLMEVRKGFLAGFVVTIAVMVIAGTIAWLISRVTGVPLNAVMIAYAP 298 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTR 159 GG M AMA AD V +R+LF++ LV Sbjct: 299 GGLETMAAMAVMMHADTAYVGSHHVIRLLFLSVLMPLVMG 338 >UniRef50_A6CU26 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CU26_9BACI Length = 357 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 72/342 (21%), Positives = 153/342 (44%), Gaps = 4/342 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAG-IIFSMRGITLQLPRSAFLAAQAILG 62 ++ ++ + + F +H+P A LLG M A + M + P I+G Sbjct: 3 IKILYTILIGSIGGMVFSLLHIPLAWLLGSMTAVFAVEKMTSFKVYWPPIFRNTGLIIVG 62 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I Q+ + + P +L + ++ LL S+++ L+ + + + + G PGG Sbjct: 63 YTIGQSFSRDTAIEIVQQLPWMLFLTVLLLLFSSVLALLITKLTGVNLRSTITGCIPGGL 122 Query: 123 AAMVAMAQDY-GADIRLVAFMQYLRVLFVAGAAVLVTR--MMLGDNAEAVNQHIVWFPPV 179 + MV + ++ D+ +V +Q +R++ V + + GD V+ + Sbjct: 123 SQMVVLGEELEDIDVTVVTIIQVIRLVSVIFIVPFMAFSPVFQGDKDGVVSAPAAVDFYL 182 Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 S+ LL+ +AV++ + L+LP+ T+L P+L +L + + +P+ + A + + Sbjct: 183 SLPLLILSGMAVLSAVLAVKLKLPTPTLLGPILGIGILSASGIAAPHMPDAAIIAAQILL 242 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G + + + L + L+A G+ L I F+T++L+ +PGG Sbjct: 243 GIYFSKMMKFEDSGSLSKFIGLTLATSVILIAFTFGLGAILMASHDITFITSFLSMAPGG 302 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 + +A++ +AD+++I R+ IL P I +++ Sbjct: 303 MAEMALVGQALHADLSIITGYHLFRILFILFAVPVILKWLFK 344 Score = 71.8 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 1/158 (0%) Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 I +L TIL+ + G V LL +P +L M A ++ + P + + Sbjct: 2 FIKILYTILIGSIGGMVFSLLHIPLAWLLGSMTAVFAVEKMTSFKVYWPPIFRNTGLIIV 61 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G+ IG F + + ++ LP +L LL + +A +T+ ++ + PGG Sbjct: 62 GYTIGQSFSRDTAIEIVQQLPWMLFLTVLLLLFSSVLALLITKLTGVNLRSTITGCIPGG 121 Query: 300 LDTVAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIA 336 L + V+ + D+ ++ +Q +RL S++ P +A Sbjct: 122 LSQMVVLGEELEDIDVTVVTIIQVIRLVSVIFIVPFMA 159 >UniRef50_C0Z7B6 Conserved hypothetical membrane protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7B6_BREBN Length = 355 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 75/330 (22%), Positives = 147/330 (44%), Gaps = 6/330 (1%) Query: 20 FLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGCMIAQNLTGSILTTLA 78 F +H P LLG ++ +I +M G+ L +PR A ++G + +T I+ T+ Sbjct: 19 FATIHSPLPWLLGALVTTVICNMLGVKNLWIPRWFRQAGLTVIGITLGLRMTSEIVDTMT 78 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 + ++L ++T+L S + W+ + + G T + + PGG + MV++ Q G + ++ Sbjct: 79 GHVGLMLITTILTILISLVNAWIFYKICRVDGITAIFSNIPGGLSEMVSVGQMAGGNQQV 138 Query: 139 VAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGC 198 + +R + V + + A ++ ++ ++ + Sbjct: 139 ITIFHSIRAISVVLCTPYLVAFLPTHAAIQTATTEHVLGIGQT--VMILVAGLIGALIAS 196 Query: 199 LLRLPSGTMLIPMLAGAVLQSGQLI---TIELPEWLLAMAYMAIGWRIGLGFDKQILLRA 255 +P+ +L +L A++ + + LP L+ A + IG IGLGF ++ +++ Sbjct: 197 RCYIPAPFLLGALLVTALISMNTSLVGESPALPSILVQGAQIFIGVSIGLGFKREDIVKN 256 Query: 256 LRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMA 315 R L+ L + +A G++ D +TA LAT PGGL +++ A + AD Sbjct: 257 RRFFLFGLMHSLFLFVMVIVLAIGISYVTATDIVTAILATVPGGLAEMSLTALATGADPL 316 Query: 316 LIMAMQTLRLFSILLTGPAIARFISTYAPK 345 L+ A RL +L AR + Y + Sbjct: 317 LVTAFHLFRLVLVLTLFSFGARAWTNYHSR 346 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 4/161 (2%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGII----FSMRGITLQLPRSAFLAAQAI 60 Q M+ V L+ ++ ++PA LLG ++ + S+ G + LP AQ Sbjct: 180 QTVMILVAGLIGALIASRCYIPAPFLLGALLVTALISMNTSLVGESPALPSILVQGAQIF 239 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G I + + L L + ++ + ++ T + PG Sbjct: 240 IGVSIGLGFKREDIVKNRRFFLFGLMHSLFLFVMVIVLAIGISYVTATDIVTAILATVPG 299 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 G A M A GAD LV R++ V R Sbjct: 300 GLAEMSLTALATGADPLLVTAFHLFRLVLVLTLFSFGARAW 340 >UniRef50_A8IB98 Putative ammonia monooxygenase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IB98_AZOC5 Length = 366 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 78/336 (23%), Positives = 147/336 (43%), Gaps = 2/336 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 + + + L+ F + P ++GP+I + G+ L+ + +LG Sbjct: 14 RVALGLAIGLVGGCLFAWIRTPLPWIIGPIICCGFATFLGLPLKASSEGRIVGMLVLGVA 73 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + T + + P+++A TL+ A +LL R + + T + S PGG A Sbjct: 74 LGLYFTPEAAIAVLAHLPVIIAASGTTLVVGAAASFLLARTARIDHVTAFFCSVPGGVAE 133 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 M + + +G +A Q LRV+ V ++ + + F P L Sbjct: 134 MSMVGERFGGRPMPIAVTQLLRVVSVTILIPTTLTLLGAGGSSTSALGALPFSPT--GLA 191 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 +++ LA + R + +L PM G VL + +P WL A+ + +G IG Sbjct: 192 VSLCLAFAFSALLARFRFRNAWLLGPMAVGCVLGLSEAGLSSVPPWLTAVGQVLMGAHIG 251 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 FD+ ++ R +P L+++ L+A CAG+ + I LATSPGG+ + Sbjct: 252 AQFDRALITSMWRFIPAALINLGVLMAGCAGVGVLVAYVSGISPGNMVLATSPGGVTEMC 311 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 + A + D+ +++A +R+F ++L+ P + R + Sbjct: 312 ITAKVLHLDVPIVVAFHIVRIFLVILSAPYLFRLLR 347 Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 62/175 (35%), Gaps = 1/175 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAI 60 + L+ S A LLGPM G + + L +P Q + Sbjct: 186 SPTGLAVSLCLAFAFSALLARFRFRNAWLLGPMAVGCVLGLSEAGLSSVPPWLTAVGQVL 245 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G I +++T++ P L L V + A VG L+ S + +SPG Sbjct: 246 MGAHIGAQFDRALITSMWRFIPAALINLGVLMAGCAGVGVLVAYVSGISPGNMVLATSPG 305 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW 175 G M A+ D+ +V +R+ V +A + R++ + Sbjct: 306 GVTEMCITAKVLHLDVPIVVAFHIVRIFLVILSAPYLFRLLRATGVMPMPPTHAA 360 Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 70/178 (39%), Gaps = 1/178 (0%) Query: 171 QHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEW 230 + + L + + +V G + +R P ++ P++ L ++ Sbjct: 3 PSPSFNRASLGRVALGLAIGLVGGCLFAWIRTPLPWIIGPIICCGFATFLGL-PLKASSE 61 Query: 231 LLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMT 290 + + +G +GL F + + L LP I+ + L + A ++ L R ID +T Sbjct: 62 GRIVGMLVLGVALGLYFTPEAAIAVLAHLPVIIAASGTTLVVGAAASFLLARTARIDHVT 121 Query: 291 AYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 A+ + PGG+ ++++ I Q LR+ S+ + P + SA Sbjct: 122 AFFCSVPGGVAEMSMVGERFGGRPMPIAVTQLLRVVSVTILIPTTLTLLGAGGSSTSA 179 >UniRef50_B9YZ45 Membrane protein AbrB duplication n=2 Tax=Betaproteobacteria RepID=B9YZ45_9NEIS Length = 347 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 2/321 (0%) Query: 26 PAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVL 85 P L+GP++A + G++LQ PR A Q +G + T ++ L P +L Sbjct: 29 PLPWLVGPLLATAGGRLAGLSLQGPRWGRAAGQWAIGSALGLYFTPEVVRLLGGLLPYLL 88 Query: 86 AILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYL 145 L + + + LL R+S L + + S PGGA+ M +A+ +G + +VA L Sbjct: 89 PAALFAFVLAGLGALLLQRWSGLDHGSAFFASMPGGASEMANLAERHGVRVDMVAAAHSL 148 Query: 146 RVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSG 205 R+L V + + A+ H LLL L + AG V LR P+ Sbjct: 149 RMLLVVTLIPALFTLSGVHGADLY--HAAGRTLHYPGLLLLGALGLAAGWVWSRLRQPNP 206 Query: 206 TMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLS 265 M+ P+L +L + + LP W +A + IG +G F A R L + S Sbjct: 207 WMIGPLLVTVLLTASGIELSALPPWASPLAQLLIGCSLGSRFSPGFFRVAPRFLAAVAAS 266 Query: 266 IFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRL 325 L+ A L ++ T L T+PGG+ + + A + ++ A Q R+ Sbjct: 267 SGVLMLAAAAFGGALAWLAGLNPATVMLGTTPGGIAEMCLTAHALQLGVPVVTAFQVCRM 326 Query: 326 FSILLTGPAIARFISTYAPKR 346 ++L + R+++ +R Sbjct: 327 LCVVLLTDPLYRYLAVRLARR 347 Score = 67.1 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 1/146 (0%) Query: 18 IGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGCMIAQNLTGSILTT 76 + + P ++GP++ ++ + GI L LP A AQ ++GC + + Sbjct: 196 WVWSRLRQPNPWMIGPLLVTVLLTASGIELSALPPWASPLAQLLIGCSLGSRFSPGFFRV 255 Query: 77 LAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADI 136 V A V +L++A G L + L T G++PGG A M A + Sbjct: 256 APRFLAAVAASSGVLMLAAAAFGGALAWLAGLNPATVMLGTTPGGIAEMCLTAHALQLGV 315 Query: 137 RLVAFMQYLRVLFVAGAAVLVTRMML 162 +V Q R+L V + R + Sbjct: 316 PVVTAFQVCRMLCVVLLTDPLYRYLA 341 >UniRef50_A3K1Y0 Putative ammonia monooxygenase n=3 Tax=Rhodobacteraceae RepID=A3K1Y0_9RHOB Length = 362 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 73/350 (20%), Positives = 143/350 (40%), Gaps = 8/350 (2%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-----LQLPRSAFLAA 57 VLQ M+ + + + VH P + G ++A + P + Sbjct: 11 VLQTAMMLAIGTIGGLLAYWVHWPMPWMFGGLLAAGVTVRLVQPKVISDYAFPMNFRTFF 70 Query: 58 QAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGS 117 A++G MI +T +L+ + A++ + + + R T + Sbjct: 71 VALIGVMIGTQVTPDLLSLAGELPITLSALVFFVVAAHLGNMTIFHRIGGYDKATALFSG 130 Query: 118 SPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW-- 175 +PGG + M + GAD R++ Q+LR++ V + + +G + + Sbjct: 131 TPGGLMESIFMGESAGADTRVLTVQQFLRIILVITLLPVGLSLWIGHPVGSAAGLTIGGD 190 Query: 176 -FPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 P + L + + AV+ +G +RLP+ + P+L A ++ + LP WL+A Sbjct: 191 KPPVTPLALGMIAITAVLGLWIGRRIRLPAPQLTGPLLLAATATITGILDLHLPFWLIAT 250 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 A + IG +G+ F R L LS+ +L + A L I F+ +++ Sbjct: 251 AQLVIGVSLGMRFKGVDAGLLRRSLWLAALSVSYMLVLGMTFAIVLQHLTGIAFLHLFIS 310 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 +PGG+ ++V+A A+ AL+ +R+ ++ P A+ + Sbjct: 311 FAPGGVAEMSVVALSLAANPALVSLHHVVRILITVVEMPLAAKVMGLRTK 360 Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 1/163 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQA 59 + L GM+ + ++L + LPA L GP++ ++ G + L LP AQ Sbjct: 194 VTPLALGMIAITAVLGLWIGRRIRLPAPQLTGPLLLAATATITGILDLHLPFWLIATAQL 253 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G + G L + + + L+ +L + + +P Sbjct: 254 VIGVSLGMRFKGVDAGLLRRSLWLAALSVSYMLVLGMTFAIVLQHLTGIAFLHLFISFAP 313 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 GG A M +A A+ LV+ +R+L L ++M Sbjct: 314 GGVAEMSVVALSLAANPALVSLHHVVRILITVVEMPLAAKVMG 356 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 57/169 (33%), Gaps = 4/169 (2%) Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAV----LQSGQLITIELPEWLLAMAYMAI 239 + + + + G + + P M +LA V +Q + P I Sbjct: 15 AMMLAIGTIGGLLAYWVHWPMPWMFGGLLAAGVTVRLVQPKVISDYAFPMNFRTFFVALI 74 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G IG +L A + +F ++A G R D TA + +PGG Sbjct: 75 GVMIGTQVTPDLLSLAGELPITLSALVFFVVAAHLGNMTIFHRIGGYDKATALFSGTPGG 134 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 L + + AD ++ Q LR+ ++ P + +A Sbjct: 135 LMESIFMGESAGADTRVLTVQQFLRIILVITLLPVGLSLWIGHPVGSAA 183 >UniRef50_B6ITE5 Ammonia monooxygenase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6ITE5_RHOCS Length = 378 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 78/350 (22%), Positives = 142/350 (40%), Gaps = 4/350 (1%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 L F +H+P A ++G +++ +M G+ + +PR A +LG Sbjct: 23 WRGLAATLGLGAAGGSLFFLLHVPLAFMIGALVSVTAAAMAGVRVSVPRRLRTAMVVVLG 82 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 M+ ++L L+ + ++L T+ ++ L R + G T + + PGG Sbjct: 83 IMLGSAFRPAMLEHLSEWAVSLGGLVLYTVAAALAGLLYLRRVARYDGVTAYFTAMPGGF 142 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 MV M G D R +A +R++ +++ G A + + P I+ Sbjct: 143 QEMVLMGAAMGGDDRTIALAHSMRIMLTVLTVPFAFQLLPGFAPAARDWSLGGLGPGLID 202 Query: 183 L----LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 L + + + V LR+P+G ++ PML A + L + P L+A A + Sbjct: 203 LPLRDVALLAACALGAPVAQRLRIPAGMLVGPMLLSAAVHLSGLTVGKPPGLLVAAAQVV 262 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 +G IG F L + L ALLA+ MA + +D LA +PG Sbjct: 263 VGAGIGCRFVGVPLRTIVAVAAAALGLTVALLAVTVLMALSVHLLTGLDLAALILAYAPG 322 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 GL ++++A + D A + R+ I++ P R + + + Sbjct: 323 GLAEMSLVALSLHVDAAFVATHHIARIVLIVIFAPLAWRLWQAHRRRGAG 372 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 1/179 (0%) Query: 168 AVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIEL 227 A V L T+ L G++ LL +P M+ +++ + + + Sbjct: 11 APEAAGVPAGTDWRGLAATLGLGAAGGSLFFLLHVPLAFMIGALVSVTAAAMAG-VRVSV 69 Query: 228 PEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHID 287 P L + +G +G F +L + + +A L R D Sbjct: 70 PRRLRTAMVVVLGIMLGSAFRPAMLEHLSEWAVSLGGLVLYTVAAALAGLLYLRRVARYD 129 Query: 288 FMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 +TAY PGG + ++ A D I ++R+ +LT P + + +AP Sbjct: 130 GVTAYFTAMPGGFQEMVLMGAAMGGDDRTIALAHSMRIMLTVLTVPFAFQLLPGFAPAA 188 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 1/158 (0%) Query: 19 GFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM-IAQNLTGSILTTL 77 + +PA +L+GPM+ + G+T+ P +AA ++ I G L T+ Sbjct: 220 VAQRLRIPAGMLVGPMLLSAAVHLSGLTVGKPPGLLVAAAQVVVGAGIGCRFVGVPLRTI 279 Query: 78 AVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIR 137 L + + L + ++ + + L +PGG A M +A D Sbjct: 280 VAVAAAALGLTVALLAVTVLMALSVHLLTGLDLAALILAYAPGGLAEMSLVALSLHVDAA 339 Query: 138 LVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW 175 VA R++ + A L R+ Sbjct: 340 FVATHHIARIVLIVIFAPLAWRLWQAHRRRGAGTPPGV 377 >UniRef50_A4EFY2 Putative ammonia monooxygenase n=3 Tax=Bacteria RepID=A4EFY2_9RHOB Length = 350 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 70/343 (20%), Positives = 128/343 (37%), Gaps = 2/343 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 +L + L + LP +LGPMIA +M P ++ Sbjct: 6 TLLPQFTALAIGLAGGVMAYFAGLPLPWMLGPMIANTAAAMLRAPTVGPDQLRPFVIPVI 65 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G M+ +T I L +L + + ++ I + R T + + PGG Sbjct: 66 GVMLGSGVTAEIFGLLGTWVLTLLLLPVFLACAAGISYAVYRRIGKYDPVTAFYSAMPGG 125 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA--VNQHIVWFPPV 179 M+ + + G D R +A RVL + L ++LG ++ Q I + Sbjct: 126 LNEMLILGGEAGGDERRIALAHAARVLIIIIFVALFFGLILGVSSGGRGTVQWIGLYEIT 185 Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 ++ + AV +G + LP+ + PM+ + +T+ P + A + I Sbjct: 186 MLDYAILGFCAVAGALLGRWIGLPAAPVFGPMILSGIAHIAGWVTVAPPTIFVIAAQITI 245 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G IG F L + ++ +L G A + I A+LA SPGG Sbjct: 246 GTIIGTRFIGATLAEIRTDIGLSAVASTLMLIAAVGFAELIVLISGIPLAQAFLAFSPGG 305 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 L ++++ D+ + M +R+ ++ P + + I Sbjct: 306 LTEMSLLTLAMEQDVTYVSIMHIIRITLVIALAPFVFKLIRKR 348 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 1/162 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQA 59 + +L + +L ++ ++ + LPAA + GPMI I + G +T+ P +AAQ Sbjct: 184 ITMLDYAILGFCAVAGALLGRWIGLPAAPVFGPMILSGIAHIAGWVTVAPPTIFVIAAQI 243 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +G +I G+ L + + + + L+++ L+V S +P SP Sbjct: 244 TIGTIIGTRFIGATLAEIRTDIGLSAVASTLMLIAAVGFAELIVLISGIPLAQAFLAFSP 303 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 GG M + D+ V+ M +R+ V A V +++ Sbjct: 304 GGLTEMSLLTLAMEQDVTYVSIMHIIRITLVIALAPFVFKLI 345 Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 59/175 (33%), Gaps = 1/175 (0%) Query: 174 VWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLA 233 + P + + + + G + LP ML PM+A + T+ P+ L Sbjct: 1 MSEPKTLLPQFTALAIGLAGGVMAYFAGLPLPWMLGPMIANTAAAMLRAPTVG-PDQLRP 59 Query: 234 MAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 IG +G G +I + +LL L R D +TA+ Sbjct: 60 FVIPVIGVMLGSGVTAEIFGLLGTWVLTLLLLPVFLACAAGISYAVYRRIGKYDPVTAFY 119 Query: 294 ATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + PGGL+ + ++ + D I R+ I++ I + Sbjct: 120 SAMPGGLNEMLILGGEAGGDERRIALAHAARVLIIIIFVALFFGLILGVSSGGRG 174 >UniRef50_A6VSZ2 Putative ammonia monooxygenase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSZ2_MARMS Length = 359 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 143/339 (42%), Positives = 208/339 (61%), Gaps = 1/339 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 + +L +S +L + F +LPAALLLGPMI II + G ++LP+ FL AQ +L Sbjct: 17 TTWRLTVLLAVSFVLVVCFEYANLPAALLLGPMITAIILATSGAGMKLPKPMFLMAQGVL 76 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G MIA +L ++ +++ WP+ L + T+++S+ +GWLL R LPG T WGSSPG Sbjct: 77 GMMIANSLPLTVFAKISMEWPLFLIGTVSTIVASSFLGWLLSRSGLLPGTTAIWGSSPGA 136 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+AM M++ YGAD+RLVAFMQYLRV A AA + + + A Sbjct: 137 ASAMTIMSESYGADMRLVAFMQYLRVACCAIAA-TIVAAIFHVDGVAAEPIDWLGVSSWS 195 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 +T+ + +VA VG LRLPSG +L+ + G V++ ++ I LP W LA+++ +GW Sbjct: 196 GFGITLSVILVASIVGVKLRLPSGPLLLSLAVGLVIKFSGILPIVLPHWCLAISFAMLGW 255 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 IG F +Q+L A P +L +I AL+AI A +A L F ID +TA+LATSPGG D Sbjct: 256 GIGFRFTRQVLQHAWHVFPHVLAAILALIAINACLAMLLITFADIDPLTAFLATSPGGAD 315 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 +VA+IAA +NAD++ +MAMQ R +L+ GP +AR++S Sbjct: 316 SVAIIAASTNADVSFVMAMQVARFLLVLIAGPMLARWLS 354 Score = 71.8 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 1/153 (0%) Query: 173 IVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLL 232 P + L + + ++ V LP+ +L PM+ +L + ++LP+ + Sbjct: 11 TPSRWPTTWRLTVLLAVSFVLVVCFEYANLPAALLLGPMITAIILATSG-AGMKLPKPMF 69 Query: 233 AMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAY 292 MA +G I + + P L+ + + + + W L+R + TA Sbjct: 70 LMAQGVLGMMIANSLPLTVFAKISMEWPLFLIGTVSTIVASSFLGWLLSRSGLLPGTTAI 129 Query: 293 LATSPGGLDTVAVIAAGSNADMALIMAMQTLRL 325 +SPG + +++ ADM L+ MQ LR+ Sbjct: 130 WGSSPGAASAMTIMSESYGADMRLVAFMQYLRV 162 >UniRef50_C6Q0M4 Membrane protein AbrB duplication n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0M4_9CLOT Length = 363 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 153/359 (42%), Gaps = 23/359 (6%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 + M ++++L L + +PA ++G M+ +FS+ +P++ + Q G Sbjct: 5 INLIMTLIVAILGGTIALRLKIPAGAMVGSMVVVAVFSVITGHAFIPQNIKIITQICAGA 64 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I ++ + + + + +++ + +G+++ R + + T + ++P G Sbjct: 65 YIGASIKRKDVLEMRLIIKPAILMVVSMITLDLFMGYVMFRVTRIDLITALFSTAPAGIV 124 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGD------------------- 164 M ++ D+GAD V + +R++ V + + Sbjct: 125 DMSLISDDFGADTSKVVVLHLIRLVTVLIVFPPMMNFIAKSFKNEDKNALDEIASSVDEA 184 Query: 165 ---NAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQ 221 ++ SINLL+T +LA+ G +G +L++P+GTM M A L Sbjct: 185 NLQRKSNRTKNKSTLKEKSINLLITTVLALATGLIGYILKIPAGTMTFSMAAVGALNVIF 244 Query: 222 LITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLT 281 +P L + M G IG +++ L + + ++++ + + + Sbjct: 245 DKGF-MPLNLRRLTQMFAGALIGSRVTYGDIVQLKSILIPAFILLIGIISVNLFIGFLIN 303 Query: 282 RFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 + ++ +T+ LA++PGGL +A+IA D I + T+R+ +++ P + + ++ Sbjct: 304 KTSGLELITSLLASAPGGLSDMALIAKELGGDAPKIAILHTVRVVTVIGIFPLLIKIVT 362 Score = 98.3 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 86/170 (50%), Gaps = 1/170 (0%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 INL++T+++A++ GT+ L++P+G M+ M+ AV +P+ + + + Sbjct: 3 FMINLIMTLIVAILGGTIALRLKIPAGAMVGSMVVVAVFSVITGHAF-IPQNIKIITQIC 61 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 G IG ++ +L + +L + +++ + M + + R ID +TA +T+P Sbjct: 62 AGAYIGASIKRKDVLEMRLIIKPAILMVVSMITLDLFMGYVMFRVTRIDLITALFSTAPA 121 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 G+ +++I+ AD + ++ + +RL ++L+ P + FI+ Sbjct: 122 GIVDMSLISDDFGADTSKVVVLHLIRLVTVLIVFPPMMNFIAKSFKNEDK 171 >UniRef50_Q0FTZ5 Putative ammonia monooxygenase n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FTZ5_9RHOB Length = 348 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 72/340 (21%), Positives = 140/340 (41%), Gaps = 1/340 (0%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 + M L F + +P + +LG M + S+ + ++ A A++G M+ Sbjct: 9 FAMALSLGAAGGAVFTLIGMPLSWMLGAMTVTGVASVLKLPVRGWSKARPPMSAVIGTML 68 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 L + A WP +L + L+++ + L R +L T + + PGG M Sbjct: 69 GSQFGPHTLQSAAQWWPALLGLAGYLLVAATLSNIYLRRVVALDRPTAFFSAMPGGLIDM 128 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN-LL 184 V M + G D R +A M R+ V + + ++ G + + ++I +L Sbjct: 129 VLMGAEKGGDERTIALMHSSRIFLVVLSLPPLMTLITGADVGGQSAAWRPLANMAIGDVL 188 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 + T G L RLP+ ++ PMLA + + +P ++A+A + +G +G Sbjct: 189 WFLGALAAGATFGKLARLPAPFLIGPMLASMAVHWSGVSGFVVPSAVIAVAQVVLGTTVG 248 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 F R L L + LL++ A+ L + + LA +PGGL ++ Sbjct: 249 CRFAGISTQRILHILLTSAGATAILLSVAVVFAFALQFVLDVPIEGVLLAFAPGGLAEMS 308 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 ++A N +++ ++ R+ ++L F + Sbjct: 309 LVALALNLEVSFVVVSHICRIGMVILGAQLFLVFKDSRNR 348 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 50/157 (31%), Gaps = 1/157 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGC 63 + LPA L+GPM+A + G++ +P + AQ +LG Sbjct: 186 DVLWFLGALAAGATFGKLARLPAPFLIGPMLASMAVHWSGVSGFVVPSAVIAVAQVVLGT 245 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + G + + L + + + L +P +PGG A Sbjct: 246 TVGCRFAGISTQRILHILLTSAGATAILLSVAVVFAFALQFVLDVPIEGVLLAFAPGGLA 305 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRM 160 M +A ++ V R+ V A L Sbjct: 306 EMSLVALALNLEVSFVVVSHICRIGMVILGAQLFLVF 342 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 1/161 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 + + L G V L+ +P ML M V +L IG Sbjct: 7 PTFAMALSLGAAGGAVFTLIGMPLSWMLGAMTVTGVASVLKLPVRGW-SKARPPMSAVIG 65 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 +G F L A + P +L LL L R + +D TA+ + PGGL Sbjct: 66 TMLGSQFGPHTLQSAAQWWPALLGLAGYLLVAATLSNIYLRRVVALDRPTAFFSAMPGGL 125 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 + ++ A D I M + R+F ++L+ P + I+ Sbjct: 126 IDMVLMGAEKGGDERTIALMHSSRIFLVVLSLPPLMTLITG 166 >UniRef50_B8ELT3 Membrane protein AbrB duplication n=6 Tax=Rhizobiales RepID=B8ELT3_METSB Length = 366 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 155/339 (45%), Positives = 220/339 (64%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 QW +L LS L +G A+HLPAALLLGPM+A I+ ++ ++ P+SAF++AQA++GCM Sbjct: 21 QWAILIGLSAALVVGLEALHLPAALLLGPMLAAILLTVAEGGVRAPQSAFVSAQAVVGCM 80 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 IA +L SI + NWP+ L ++ ++++ +GWLL R+ LPG WGS+PG A+A Sbjct: 81 IAGSLPLSIGGEMLRNWPLFLGGVVSVVVAANGLGWLLARWRVLPGAAAIWGSAPGAASA 140 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 M+ MA+ YGAD+RLVAFMQYLRV+ VA A LV+R+ + + + + + Sbjct: 141 MILMAEAYGADMRLVAFMQYLRVVCVAIVASLVSRLWVAGPLDHHPAIVWFPAVPWTSFA 200 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 T+ +A + G L +P+G +L+P+ G LQSG +TI LP WLLA Y +GW +G Sbjct: 201 ETLAVAALGALAGKRLHIPAGPLLLPLAIGVTLQSGGWMTIFLPPWLLAACYCVVGWSVG 260 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 L F I+ A R LP++L+SI AL+AIC G A L ID +TAYLATSPGG D++A Sbjct: 261 LRFTPAIIAYAARALPRVLVSILALIAICGGFAAILATVGGIDPLTAYLATSPGGGDSIA 320 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 +IAA S D+ +MAMQ R+ +LL GPAIARF++ + Sbjct: 321 IIAASSKVDVPFVMAMQMARILVVLLFGPAIARFVAKRS 359 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 1/173 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQA 59 +P + ++ L ++ +H+PA LL P+ G+ G +T+ LP A Sbjct: 194 VPWTSFAETLAVAALGALAGKRLHIPAGPLLLPLAIGVTLQSGGWMTIFLPPWLLAACYC 253 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G + T +I+ A P VL +L + +L + T +SP Sbjct: 254 VVGWSVGLRFTPAIIAYAARALPRVLVSILALIAICGGFAAILATVGGIDPLTAYLATSP 313 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH 172 GG ++ +A D+ V MQ R+L V + R + + Sbjct: 314 GGGDSIAIIAASSKVDVPFVMAMQMARILVVLLFGPAIARFVAKRSGAGAKTS 366 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 1/177 (0%) Query: 163 GDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQL 222 +++ + + + + I L+ L LP+ +L PMLA +L + Sbjct: 2 ANSSPSPRRVSLASRSAGAQWAILIGLSAALVVGLEALHLPAALLLGPMLAAILLTVAEG 61 Query: 223 ITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTR 282 + P+ A +G I I LR P L + +++ G+ W L R Sbjct: 62 -GVRAPQSAFVSAQAVVGCMIAGSLPLSIGGEMLRNWPLFLGGVVSVVVAANGLGWLLAR 120 Query: 283 FMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + + A ++PG + ++A ADM L+ MQ LR+ + + ++R Sbjct: 121 WRVLPGAAAIWGSAPGAASAMILMAEAYGADMRLVAFMQYLRVVCVAIVASLVSRLW 177 >UniRef50_A6TSB9 Putative ammonia monooxygenase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TSB9_ALKMQ Length = 346 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 143/346 (41%), Gaps = 8/346 (2%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILG 62 + + ++ + L + + PA LLGPMI I S+ G LP+ + Q I+G Sbjct: 1 MIYLLIVSIGLFGWLVMRKIKAPAPALLGPMIFVGIASIGGFNFPHLPQVSVSIFQLIIG 60 Query: 63 CMIAQNLTGSILTTLAV--NWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 + +T L + IL+ T+ SS + +L+ + L T +PG Sbjct: 61 IFVGMRITRGQFQLLKRRTVLYSFILILIWTVGSSLVAANVLLTLTDLDVATALLAGTPG 120 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 G M +A YGAD+ VA +Q LR+ F+ ++ + N + + Sbjct: 121 GLTEMSVVAFAYGADVPTVALLQLLRLTFIVSFIPFLSLSIKKKNGGYTEKIKDKKDVIE 180 Query: 181 INL-----LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMA 235 + + I ++ G + L P+G ++ ++ + LP+ + +A Sbjct: 181 EVVKRKVSVEIIGTGLIVGVLLMYLNFPAGGLIGAIIGVGGSSIILNKSAYLPKSVQLIA 240 Query: 236 YMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLAT 295 + IG IGL F ++ + R + +++ ++ +A + D T L + Sbjct: 241 QIGIGISIGLRFTQETFQQFSRLIGPMIILPLFMVLSGVLLAIIIKNITKWDLSTCLLCS 300 Query: 296 SPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 +P GL + ++A +D+ L+ QT RL +I L P I + Sbjct: 301 APAGLSQMIIVAEEIESDVFLVSLFQTTRLLAIYLILPQIFNWYLR 346 Score = 94.5 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 2/161 (1%) Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 LL + + + V ++ P+ +L PM+ + G LP+ +++ + IG + Sbjct: 4 LLIVSIGLFGWLVMRKIKAPAPALLGPMIFVGIASIGGFNFPHLPQVSVSIFQLIIGIFV 63 Query: 244 GLGFDKQILLRALR--PLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 G+ + R L +L + + A L +D TA LA +PGGL Sbjct: 64 GMRITRGQFQLLKRRTVLYSFILILIWTVGSSLVAANVLLTLTDLDVATALLAGTPGGLT 123 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 ++V+A AD+ + +Q LRL I+ P ++ I Sbjct: 124 EMSVVAFAYGADVPTVALLQLLRLTFIVSFIPFLSLSIKKK 164 >UniRef50_C9KL73 Putative membrane protein AbrB duplication n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KL73_9FIRM Length = 352 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 5/349 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILG 62 +++ +LS+L I ++ P LGP++ + S+ A +LG Sbjct: 1 MEYCKTLILSILGGIAMTYLNAPLPWTLGPIVFVALGSLIRKRPFHWSLRIRNTALILLG 60 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + + T + +P+++ +T+ + + WL+ R++ + + G PGG Sbjct: 61 YAMGRPFTLETGRAILAQFPLMITATCITVAAGVLTAWLMFRHTKINFTSCLLGCVPGGL 120 Query: 123 AAMVAMAQD-YGADIRLVAFMQYLRVLFVAGAAVLVT--RMMLGDNAEAVNQHIVWFPPV 179 + MV +A + AD+ V MQ LR+L V +T + +A A V Sbjct: 121 SQMVILADEIRDADLTAVTIMQTLRMLSVVFVIPFLTIHVLAGSSHAAASAGTAVHAAGS 180 Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAV-LQSGQLITIELPEWLLAMAYMA 238 +L +AV+ + + LP+ ML P+L+ A + +P + A + Sbjct: 181 LAEILTYAAVAVLGAVLAKKIHLPTAPMLGPILSTAAFVVITGTAAPVVPVHYINAAQVL 240 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 +G IG D L + +L + +L + GM ++ D TA+LAT+PG Sbjct: 241 VGAYIGSSVDLTRLHQYHGMGKVLLGGVLLVLLVSMGMGCIISEVTGTDLATAFLATAPG 300 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 GL + + A AD + ++A Q RL I+L P IAR I +++ Sbjct: 301 GLTEMGITALVVGADSSTMVAYQLTRLLFIMLVFPYIARAIVALYRRKT 349 >UniRef50_Q9RC51 BH3837 protein n=3 Tax=Bacillus RepID=Q9RC51_BACHD Length = 343 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 70/342 (20%), Positives = 144/342 (42%), Gaps = 2/342 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 L G+ +++ + F A +PA LLG +++G++ ++ + LP F A +G Sbjct: 2 LSKGVFLAVTVAVGALFAAFQVPAGWLLGSLLSGMVCTLWIKKIMLPDRLFKWTLAAIGG 61 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I L + L++TL ++G L R+S++ NT + PGGA+ Sbjct: 62 NIGFMLRPEQFLQYHSLLGPFVVTLVLTLCGGILLGKFLKRFSNVNHNTAFFCCMPGGAS 121 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 ++A+++DYGAD R+VA R+ F L + + + + + L Sbjct: 122 EVIALSKDYGADQRIVAAFHTTRITFFVFVIPLFVGLNVTGRTG-LGTMFLPLDETLLAL 180 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 + + V+ + + P ++ + G ++ I LP ++ +A +G I Sbjct: 181 GALMAVVVLTIFLSKHVTFPGASLFFAIGLGFLVH-TLFPQIILPGYVQGVAQGVMGAVI 239 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G FD++ R +++ + G+A T +++ + L+ P G + Sbjct: 240 GARFDRETFGELKRMGFISAITLLLYFIMSLGLAGLFTWMTPLEWYMSLLSIVPAGAAEM 299 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 A A + A++ +Q R+ ++ L P + ++ S Sbjct: 300 ASTATALQMEPAMVATLQMARVLALFLCLPFLIKWFSKQDNN 341 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 55/164 (33%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 +L G L + +L V P A L + G + + LP AQ ++ Sbjct: 176 TLLALGALMAVVVLTIFLSKHVTFPGASLFFAIGLGFLVHTLFPQIILPGYVQGVAQGVM 235 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G +I L I LL+ + S + L + L P G Sbjct: 236 GAVIGARFDRETFGELKRMGFISAITLLLYFIMSLGLAGLFTWMTPLEWYMSLLSIVPAG 295 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN 165 AA M + A + +VA +Q RVL + + + + Sbjct: 296 AAEMASTATALQMEPAMVATLQMARVLALFLCLPFLIKWFSKQD 339 >UniRef50_O07568 Uncharacterized protein yhjN n=6 Tax=Bacillus RepID=YHJN_BACSU Length = 384 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 155/366 (42%), Gaps = 22/366 (6%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM--------RGITLQLPRSAF 54 +L+ +S + ++G +I +M + R Sbjct: 7 LLKDLWFIAISAAGGFILSLTGISIGWMIGTLIVACCLAMIRPAWLMMAPDQKGINRRWL 66 Query: 55 LAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGA 114 Q ILG + Q L S+L+ L +W V +L++++L + + G++L R+S T Sbjct: 67 ALGQMILGIELGQKLNLSVLSVLKDHWFSVGVMLILSILLAMLSGYVLWRFSKTDMMTSF 126 Query: 115 WGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIV 174 G++PGG +AM ++AQ+ GA+ +V+ +Q +RVL V + + ++ + Sbjct: 127 VGTAPGGLSAMPSIAQEVGANTAIVSLVQMMRVLLVVLSIPFLVILIYTKQDRTASAAAE 186 Query: 175 WFPPVSINL--------LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQ--LIT 224 + + ++ IL A A L+ P+ +L ML A++ G + Sbjct: 187 TISSATTDFRLAPVLWTVILILAAWGACKAAKFLKFPAPWLLGSMLGVAIVHVGGAAVTG 246 Query: 225 IELPEWLLAMA----YMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGL 280 ++ W L+ A + +G IG K + R + +S L+A A + Sbjct: 247 HDMTAWWLSQANHVSQVFLGATIGSKMYKSMFAGVTRIIIVGFVSSVGLIAAMFLSAVIV 306 Query: 281 TRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 + I +T+ LA +PGG+ +A + +AD ++A+Q +R+ ++ P R + Sbjct: 307 SELTGISLITSVLAFAPGGIAEMATTSVTLHADSTFVVAVQVIRVILVIALLPPFYRLLH 366 Query: 341 TYAPKR 346 ++ Sbjct: 367 HLHGEK 372 Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 7/169 (4%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-------TLQLPRSAF 54 PVL +L + + + PA LLG M+ I + G T A Sbjct: 199 PVLWTVILILAAWGACKAAKFLKFPAPWLLGSMLGVAIVHVGGAAVTGHDMTAWWLSQAN 258 Query: 55 LAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGA 114 +Q LG I + S+ + + + + + + ++ + + T Sbjct: 259 HVSQVFLGATIGSKMYKSMFAGVTRIIIVGFVSSVGLIAAMFLSAVIVSELTGISLITSV 318 Query: 115 WGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG 163 +PGG A M + AD V +Q +RV+ V R++ Sbjct: 319 LAFAPGGIAEMATTSVTLHADSTFVVAVQVIRVILVIALLPPFYRLLHH 367 >UniRef50_B4U2X4 Putative ammonia monooxygenase n=3 Tax=Streptococcus dysgalactiae group RepID=B4U2X4_STREM Length = 398 Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 14/349 (4%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 L M + L + + +PA ++G M+A + S+ ++ + AQ I G Sbjct: 47 LSILMTLFVGTLGGLVAKRLSIPAPFMIGSMVAVALASILTKQVEAISPMKIFAQIISGA 106 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I Q+++ S L L +++++ + L+ +G +LV L T PGG Sbjct: 107 YIGQSVSKSDLLNLPKLAKSIISLMALFTLNMLCLGLVLVYCFDLDPVTALLSCLPGGIM 166 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG-------------DNAEAVN 170 + MA D GA +VA +Q R++ + + + + Sbjct: 167 DVSLMAVDMGAKADIVATLQSARLIGMLLLLPAWVAFWVNRFDPKAKATKKKIVKSASSQ 226 Query: 171 QHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEW 230 N + + +A + G +G L++P G +++ +L L+ + T ++P Sbjct: 227 DTRPSRKEQLWNNVQVLSIATIGGLIGLGLKIPVGALIVSLLFSTALKVLR-QTSQMPST 285 Query: 231 LLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMT 290 L +A + G IG F + LL+ R + ILL + + L I + + + +D + Sbjct: 286 LRYIAQVFAGSIIGTSFTQDSLLQMGRLIVPILLLLSSYLIINLFFGYIMYKKGILDLQS 345 Query: 291 AYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 A A+SP G ++++A DM I +Q R ++ P + +++ Sbjct: 346 ALFASSPAGATDISLLAGELGGDMPKIAGIQISRTLYTVVIMPLLVKWL 394 Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 2/171 (1%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 +++L+T+ + + G V L +P+ M+ M+A A+ + + A + Sbjct: 45 GMLSILMTLFVGTLGGLVAKRLSIPAPFMIGSMVAVALASILTKQVEAI-SPMKIFAQII 103 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 G IG K LL + I+ + + L +D +TA L+ PG Sbjct: 104 SGAYIGQSVSKSDLLNLPKLAKSIISLMALFTLNMLCLGLVLVYCFDLDPVTALLSCLPG 163 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGP-AIARFISTYAPKRSA 348 G+ V+++A A ++ +Q+ RL +LL P +A +++ + PK A Sbjct: 164 GIMDVSLMAVDMGAKADIVATLQSARLIGMLLLLPAWVAFWVNRFDPKAKA 214 >UniRef50_A3JPA2 Putative ammonia monooxygenase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JPA2_9RHOB Length = 350 Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 144/336 (42%), Gaps = 6/336 (1%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMI-----AGIIFSMRGITLQLPRSAFLAAQAILGC 63 L + + +I + LP ++G +I I + I+G Sbjct: 12 LFIAAFFGAILAYKIGLPMPFMMGSLISTATIITIFPKIFPDKYAFAPRLRTVVLTIIGV 71 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I +T I+T +L ++L ++ + +L R + P + +PGG Sbjct: 72 AIGSQITPEIVTRAPEIAISLLGVVLFVPIAHFVNYMILRRLAGYPRYDALFAGAPGGFI 131 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI-N 182 + +A++YGAD++ V +LRV+FV L+ + LG+ + V Sbjct: 132 ESITLAEEYGADVKRVGIQHFLRVVFVIFLVPLILTLYLGNPVGVARADVFVIDMVPPVQ 191 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 + L +A+ + L++P+G ++ P++ A++ ++++P W++A + +G Sbjct: 192 IALIANVALFGFLIARALKIPAGMLIGPLIIAAIISGFNGPSLDVPTWVVAFGQIIVGTS 251 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G+ F L+ L+++ A L + A + L F T ++ +PGGL Sbjct: 252 LGIRFQGLKGKLLLKSAWWCLVTVSATLVLSATFSQILYGIGGQSFETLLISFAPGGLTE 311 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 + +IA +A+ A+++ +R+ ++ RF Sbjct: 312 MGLIALSLSANSAVVVFHHLVRIIMTVMQLTLFIRF 347 Score = 71.8 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 1/161 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQA 59 +P +Q ++ ++L + A+ +PA +L+GP+ IA II G +L +P Q Sbjct: 187 VPPVQIALIANVALFGFLIARALKIPAGMLIGPLIIAAIISGFNGPSLDVPTWVVAFGQI 246 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 I+G + G L + L + TL+ SA +L T +P Sbjct: 247 IVGTSLGIRFQGLKGKLLLKSAWWCLVTVSATLVLSATFSQILYGIGGQSFETLLISFAP 306 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRM 160 GG M +A A+ +V F +R++ L R Sbjct: 307 GGLTEMGLIALSLSANSAVVVFHHLVRIIMTVMQLTLFIRF 347 >UniRef50_B3QBE9 Membrane protein AbrB duplication n=9 Tax=Bradyrhizobiaceae RepID=B3QBE9_RHOPT Length = 350 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 71/338 (21%), Positives = 125/338 (36%), Gaps = 2/338 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 LQ + F LP L+ G MIA + G + LP LG Sbjct: 8 LQVIETIAIGSAGGALFYWAQLPGGLITGAMIAVGAAGLAGRKMGLPPPLSHIVLMALGV 67 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + ++ +++ LA + + + T ++ L R + SPG + Sbjct: 68 SLGSVVSPTMVHNLASYPVTIGLLAVATFCATFGSSIYLQRVHGWDRTSALLAGSPGALS 127 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 ++ +A + AD+ +A +Q +RV+ + A ++ ++ A+ P + L Sbjct: 128 QIIMLATERKADVPGIAVVQVMRVIILTSAVPMLLALIGMAGHGALPSRGPEATP--LVL 185 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 + I +AV + L+ P+ M ML +VL G + LP+W A + IG I Sbjct: 186 AVLIAVAVGVALLLRLVNFPASWMFGAMLGSSVLHGGGWVEGTLPQWAYLAALVGIGTLI 245 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G F L + L S +AI A + + +A SPG +D + Sbjct: 246 GARFGAIKPRTILSYIGAALGSFAVAIAISAVFVIAIMLTTPVKLNDLVVAFSPGAMDAM 305 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 +A + D + A R + + P I Sbjct: 306 MALALTLHIDPVFVGAHHLSRFIYVSIVTPGIVHLFGH 343 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 1/165 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAI 60 L +L +++ +++ V+ PA+ + G M+ + G + LP+ A+LAA Sbjct: 181 TPLVLAVLIAVAVGVALLLRLVNFPASWMFGAMLGSSVLHGGGWVEGTLPQWAYLAALVG 240 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G +I T+ L V + SA+ ++ + + N SPG Sbjct: 241 IGTLIGARFGAIKPRTILSYIGAALGSFAVAIAISAVFVIAIMLTTPVKLNDLVVAFSPG 300 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN 165 AM+A+A D V R ++V+ + + Sbjct: 301 AMDAMMALALTLHIDPVFVGAHHLSRFIYVSIVTPGIVHLFGHSP 345 >UniRef50_B5JCA9 Putative ammonia monooxygenase superfamily n=3 Tax=Rhodobacteraceae RepID=B5JCA9_9RHOB Length = 357 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 71/337 (21%), Positives = 133/337 (39%), Gaps = 1/337 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 + G+ L++ ++ F P L GP++A +I ++ G+ L + + ILG Sbjct: 2 WRKQGLTVALAVAGTVIFWWADFPLPFLFGPLVACVIGALAGMPLVAAGNVSQWMRTILG 61 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I +LT +++ L V I L L + + G T + + PGG Sbjct: 62 VAIGASLTPQVISELPKMAASVALIPLFVLCIALLGVPFFRYVYRFDGVTAWYAAMPGGL 121 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 MV ++ G D+R ++ + R+L + A ++ + + + P Sbjct: 122 QDMVMFGKEAGGDVRALSLIHATRLLIIITIAPIILTQVFDADIKNPIGQPASEIP-PYE 180 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L++ L A++ V LR+ M+ PM+ L +I P + A IG Sbjct: 181 LVIMALTAIIGWHVAKRLRIFGAPMIGPMILAGALSITGIINYRPPAEAILTAQFFIGIA 240 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G G+ L R + + + L + T + + A+LA +P G Sbjct: 241 LGAGYVGVTLADIRRDVAAGIFFVIILAILTFIFTEIATLIAAVPPVDAFLAFAPAGQAE 300 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + V A AD+ ++ R+F +++ P AR Sbjct: 301 MTVFAIIVGADLGYVVVHHLSRVFLVVIGAPVAARVF 337 Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 65/169 (38%), Gaps = 1/169 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQA 59 +P + ++ + +++ + + A ++GPMI S+ GI + P A L AQ Sbjct: 176 IPPYELVIMALTAIIGWHVAKRLRIFGAPMIGPMILAGALSITGIINYRPPAEAILTAQF 235 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +G + G L + + + +++ + + I + +++P +P Sbjct: 236 FIGIALGAGYVGVTLADIRRDVAAGIFFVIILAILTFIFTEIATLIAAVPPVDAFLAFAP 295 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA 168 G A M A GAD+ V RV V A + R+ Sbjct: 296 AGQAEMTVFAIIVGADLGYVVVHHLSRVFLVVIGAPVAARVFGASPTNT 344 >UniRef50_C5SZI4 Membrane protein AbrB duplication n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZI4_ACIDE Length = 364 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 139/336 (41%), Gaps = 11/336 (3%) Query: 19 GFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLA 78 F +H P +LGP++A + +++G++ + + Q ++G + T +I+T L Sbjct: 20 IFRRLHTPVPWMLGPLLATALSTLKGLSTRSSLRLRNSGQWVMGASLGLYFTPAIVTQLC 79 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLV-----RYSSLP----GNTGAWGSSPGGAAAMVAMA 129 W VLA + +L + G L R + + + + G A+ M +A Sbjct: 80 ALWWAVLAAVAWSLALGMVYGCWLYSSCAGRLHGVDDAALRPSAYFAGAIGAASEMTLLA 139 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVN--QHIVWFPPVSINLLLTI 187 + A LVA LR+L V + + V +V P Sbjct: 140 EKESARTDLVAASHSLRMLIVVLVMPFGMLLAKSWWSLEVVSLAPLVSPPFTLTGAAWLA 199 Query: 188 LLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF 247 LL V G +LRLP+ L P+L L + + +P L A + IG +G+ F Sbjct: 200 LLTVAGGLALHVLRLPNPWFLGPLLVAITLAATETAPATVPMLLSNAAQLVIGVSLGVRF 259 Query: 248 DKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307 Q L A R L ++ L L+A CA L + TA L T+PGG+ +++ A Sbjct: 260 SPQFLHTAPRWLARVALGTVGLIAACAAFGVFLAWVTGLHPATAILGTAPGGMTEMSITA 319 Query: 308 AGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 + ++ A+Q RL ++L+ RF + Sbjct: 320 KALQLGVPVVTALQVTRLVAVLVLVRPAYRFWAARL 355 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 1/171 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGI-IFSMRGITLQLPRSAFLAAQAI 60 + L +L++ + + LP LGP++ I + + +P AAQ + Sbjct: 191 TLTGAAWLALLTVAGGLALHVLRLPNPWFLGPLLVAITLAATETAPATVPMLLSNAAQLV 250 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G + + L T V + + + A G L + L T G++PG Sbjct: 251 IGVSLGVRFSPQFLHTAPRWLARVALGTVGLIAACAAFGVFLAWVTGLHPATAILGTAPG 310 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ 171 G M A+ + +V +Q R++ V R + ++ Sbjct: 311 GMTEMSITAKALQLGVPVVTALQVTRLVAVLVLVRPAYRFWAARLHDGMHP 361 >UniRef50_A4U1B8 Ammonia monooxygenase n=3 Tax=Magnetospirillum RepID=A4U1B8_9PROT Length = 346 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 78/345 (22%), Positives = 135/345 (39%), Gaps = 1/345 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 M + + L F LP +LG M A II ++ G+ L +P AI Sbjct: 1 MTIRPVILALALGGTGGALFFMADLPLPWMLGAMSACIIAALSGLRLAMPTPLRAVMLAI 60 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG M+ + +L L+ + + +L++ +V R + T + ++PG Sbjct: 61 LGVMLGSAFSPDLLDQLSRWSLSLSVLFAGMILATLLVMAYFRRAGHMDLPTAYFAAAPG 120 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWF-PPV 179 G MV G D R +A + +LR+L + + R++ G + ++Q + Sbjct: 121 GVNEMVMTGGALGGDERTIALIHFLRILLIVFTIPIGFRLVTGIHGAPISQSMGSLLDLS 180 Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 ++ + + A G LLR P+ ++ PM A A+L L P L+ +A + Sbjct: 181 WLDGAVLLACAAGGAMAGRLLRFPAASLTGPMAASAILHVLGLTASHPPAELVILAQVVT 240 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G +G S L+ I AG+A L + F LA PGG Sbjct: 241 GAGLGCRMVGLKWRDLATAARIASGSTMILITISAGLAAILAWLAGLPFSMLLLAFVPGG 300 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 + + +IA D+A + LR+ ++ P R + Sbjct: 301 IAEMCLIALALGQDVAFVSTHHVLRVILVIACAPLAFRLFKPWFR 345 >UniRef50_C8WDL2 Membrane protein AbrB duplication n=6 Tax=Zymomonas mobilis RepID=C8WDL2_ZYMMN Length = 369 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 148/339 (43%), Positives = 213/339 (62%), Gaps = 1/339 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 ++QW L + S+L F +HL AALLLG M A I+ ++ T+ +PR F+ +Q ++G Sbjct: 19 LIQWASLLLGSVLFISLFEVLHLGAALLLGAMAAAILVAVMEGTVAVPRWPFMLSQGVIG 78 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 CMIA ++ IL + WP+ LA ++ +L S+++GWLLV ++ +PG T WGSSPG A Sbjct: 79 CMIAHSMPLPILDAMLRQWPLFLAGVVSVILVSSLLGWLLVCFNVVPGTTALWGSSPGAA 138 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 M MA+ YGAD+RLVAFMQYLRV+ VA A L+ ++ +G + V+ I + P Sbjct: 139 LTMTLMAESYGADVRLVAFMQYLRVVCVALIASLIAQIFMGHHPV-VSNIIWFPPIHLAA 197 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L T+ V R+P+G +L+P+ G VLQ TIELP WLLA++Y +GW Sbjct: 198 FLKTLAFIAVTTFFAARFRIPAGGILLPLGLGVVLQDAGWFTIELPTWLLAISYSLVGWS 257 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGL F + I+ A R ++L SI L+ +C+G+A L + H+DF+TAYLA+SPGG+D+ Sbjct: 258 IGLRFSRSIVRYAARSFFRVLASILTLILLCSGLALVLAKIAHVDFLTAYLASSPGGVDS 317 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 VAV+AA S DM +M MQT+R +LLT P IA +S Sbjct: 318 VAVVAASSPVDMPFVMGMQTVRFVVVLLTAPTIAGRLSR 356 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 55/121 (45%) Query: 224 TIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRF 283 T+ +P W ++ IG I IL LR P L + +++ + + + W L F Sbjct: 62 TVAVPRWPFMLSQGVIGCMIAHSMPLPILDAMLRQWPLFLAGVVSVILVSSLLGWLLVCF 121 Query: 284 MHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 + TA +SPG T+ ++A AD+ L+ MQ LR+ + L IA+ + Sbjct: 122 NVVPGTTALWGSSPGAALTMTLMAESYGADVRLVAFMQYLRVVCVALIASLIAQIFMGHH 181 Query: 344 P 344 P Sbjct: 182 P 182 Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 1/170 (0%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGCM 64 + + + +PA +L P+ G++ G T++LP + +++G Sbjct: 198 FLKTLAFIAVTTFFAARFRIPAGGILLPLGLGVVLQDAGWFTIELPTWLLAISYSLVGWS 257 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 I + SI+ A ++ VLA +L +L + + +L + + + T SSPGG + Sbjct: 258 IGLRFSRSIVRYAARSFFRVLASILTLILLCSGLALVLAKIAHVDFLTAYLASSPGGVDS 317 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIV 174 + +A D+ V MQ +R + V A + + + AE + I Sbjct: 318 VAVVAASSPVDMPFVMGMQTVRFVVVLLTAPTIAGRLSRNKAEQQKETIP 367 >UniRef50_Q2RP17 Putative ammonia monooxygenase n=4 Tax=Alphaproteobacteria RepID=Q2RP17_RHORT Length = 362 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 163/346 (47%), Positives = 224/346 (64%), Gaps = 3/346 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 LQW L S + G LPAALLLGPMIA I ++ G + LPR+ +L AQA++G Sbjct: 17 PLQWLALGATSAAVGWGLHTTGLPAALLLGPMIAAICCALAGTRIHLPRAPYLGAQAMIG 76 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 CMI +++ ++ + +W + LAI+L T+ +S+++GW++ R+ SLPG T WGSSPG A Sbjct: 77 CMIGGSISPGLIASFLDDWALFLAIVLATVAASSLLGWMMSRWGSLPGTTSVWGSSPGAA 136 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 +AMV MA+ +GAD+RLVAFMQYLRV+ VA AA L+ + + + Sbjct: 137 SAMVVMAEAFGADVRLVAFMQYLRVVCVASAAALIAHLWVEGAPPPPTPWFPALDGLVFG 196 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 T+ LA + T+G LR+PSG M++PM+A AVL S L+ I LP WLLA+AY A+GW Sbjct: 197 --QTLALAGIGATLGVFLRVPSGAMVVPMVAAAVLSSFGLLAIHLPPWLLALAYAALGWT 254 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGLGF + +L A R LPQIL SI AL+A C G AW LT + +D +TAYLATSPGGLD+ Sbjct: 255 IGLGFTRAVLAHAARALPQILASIAALMAFCGGTAWLLTSLLGVDPVTAYLATSPGGLDS 314 Query: 303 VAVIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 VA+IAA S D++ +MA+QT R ++ GP +ARFI+ + Sbjct: 315 VAIIAASSARVDLSFVMALQTARFIIVICLGPPLARFIAGRIGDKP 360 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 1/175 (0%) Query: 165 NAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT 224 + P+ + L + G LP+ +L PM+A Sbjct: 2 PLPVSPSSRLGSLPIPLQWLALGATSAAVGWGLHTTGLPAALLLGPMIAAICCALAG-TR 60 Query: 225 IELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFM 284 I LP A IG IG ++ L L + A +A + + W ++R+ Sbjct: 61 IHLPRAPYLGAQAMIGCMIGGSISPGLIASFLDDWALFLAIVLATVAASSLLGWMMSRWG 120 Query: 285 HIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + T+ +SPG + V+A AD+ L+ MQ LR+ + IA Sbjct: 121 SLPGTTSVWGSSPGAASAMVVMAEAFGADVRLVAFMQYLRVVCVASAAALIAHLW 175 >UniRef50_C6HYJ9 Putative ammonia monooxygenase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYJ9_9BACT Length = 388 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 133/315 (42%), Positives = 185/315 (58%), Gaps = 1/315 (0%) Query: 34 MIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLL 93 MIA F G ++LPR +AAQ ++G MI Q + I +T WP+ L +L +L Sbjct: 44 MIAAAAFGTSGAGIRLPRPLQIAAQGVVGVMIGQTVNPGIASTFLHTWPVFLGAVLSVVL 103 Query: 94 SSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGA 153 +S ++G +L R LPG T WG SPG A AM+ MA++YG D RLVAFMQY+RV V Sbjct: 104 ASNLLGGILGRMGVLPGTTAVWGLSPGAAQAMMVMAEEYGGDPRLVAFMQYVRVAVVVVT 163 Query: 154 AVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLA 213 A LV R+ G + A + + L ++ + +G L R+P+GT+L P+ Sbjct: 164 ASLVVRVWAGIHLVAPPPLPWFPALSPGSFLASLGVVAAGILLGRLSRVPAGTILGPLFL 223 Query: 214 GAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAIC 273 L + + P W LA AY +G IGLGF ++I ALR LP++LL+IFAL+ Sbjct: 224 AGALHATGHLATPFPRWFLAGAYGLLGVAIGLGFTREIFRHALRALPRVLLAIFALILFA 283 Query: 274 AGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGS-NADMALIMAMQTLRLFSILLTG 332 AG+A L RF+ ID +TAYLATSPGG+D+VAVIAA D+ +MA+QTLR +L+ G Sbjct: 284 AGVAALLVRFLGIDPLTAYLATSPGGMDSVAVIAASYPRLDVPFVMALQTLRFLFVLVAG 343 Query: 333 PAIARFISTYAPKRS 347 P++ARF+ T Sbjct: 344 PSLARFVVTRFVTPP 358 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 2/183 (1%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQA 59 + + + + +PA +LGP+ +AG + + + PR A Sbjct: 188 LSPGSFLASLGVVAAGILLGRLSRVPAGTILGPLFLAGALHATGHLATPFPRWFLAGAYG 247 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +LG I T I P VL + +L +A V LLVR+ + T +SP Sbjct: 248 LLGVAIGLGFTREIFRHALRALPRVLLAIFALILFAAGVAALLVRFLGIDPLTAYLATSP 307 Query: 120 GGAAAMVAMAQDY-GADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPP 178 GG ++ +A Y D+ V +Q LR LFV A + R ++ Sbjct: 308 GGMDSVAVIAASYPRLDVPFVMALQTLRFLFVLVAGPSLARFVVTRFVTPPQPPAAPSGK 367 Query: 179 VSI 181 Sbjct: 368 AVP 370 >UniRef50_Q09A72 AbrB protein n=2 Tax=Cystobacterineae RepID=Q09A72_STIAU Length = 355 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 109/322 (33%), Positives = 165/322 (51%), Gaps = 3/322 (0%) Query: 24 HLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWP 82 H+PA LLG M ++ + + + +PR AQA+LG I +LT TLA NWP Sbjct: 33 HVPAGALLGGMGVSLAAALLLSVHVPVPRWLMTGAQAVLGTAICASLTSEAWATLAENWP 92 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 + L ++ + S V L R++ + T G PGGA+AM A++ + GAD RLV F Sbjct: 93 VALINVVGVVGVSQAVALLFSRWTGVDALTATLGLLPGGASAMTALSGEVGADERLVTFF 152 Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV--SINLLLTILLAVVAGTVGCLL 200 QYLR+ V AV V+R D + V+ V + ++ L+A+ T G L Sbjct: 153 QYLRLSIVILVAVGVSRWTGADASLQVSPEAVLDTSSLPWKDWGVSTLVALGGATAGIRL 212 Query: 201 RLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLP 260 +LP+G L P+L G L + L P LL ++ +G R+G F+++ + R Sbjct: 213 KLPAGAFLGPLLVGIPLTALGLPVGAWPMGLLPLSLWTLGTRVGSRFNEEAVRELKRVAL 272 Query: 261 QILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAM 320 L + AL+ C +AWG + +D +TAY ATSPGG D+V IA G++A + L++A+ Sbjct: 273 AALGASSALVGGCVLLAWGWSALGEVDMLTAYFATSPGGADSVLAIALGTHASLTLVLAV 332 Query: 321 QTLRLFSILLTGPAIARFISTY 342 Q RL + L P R + Sbjct: 333 QVGRLLFVFLVAPLYLRRMHRR 354 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 67/170 (39%) Query: 169 VNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELP 228 + Q P + + ++ + +P+G +L M + + +P Sbjct: 1 MRQDPKPGDPSRFRVWAVTVATLLGAALAEAAHVPAGALLGGMGVSLAAALLLSVHVPVP 60 Query: 229 EWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDF 288 WL+ A +G I + P L+++ ++ + +A +R+ +D Sbjct: 61 RWLMTGAQAVLGTAICASLTSEAWATLAENWPVALINVVGVVGVSQAVALLFSRWTGVDA 120 Query: 289 MTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 +TA L PGG + ++ AD L+ Q LRL ++L ++R+ Sbjct: 121 LTATLGLLPGGASAMTALSGEVGADERLVTFFQYLRLSIVILVAVGVSRW 170 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 1/160 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQA 59 +P WG+ +++L + + + LPA LGP++ GI + G+ + P + Sbjct: 190 LPWKDWGVSTLVALGGATAGIRLKLPAGAFLGPLLVGIPLTALGLPVGAWPMGLLPLSLW 249 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 LG + + L L + ++ W + T + +SP Sbjct: 250 TLGTRVGSRFNEEAVRELKRVALAALGASSALVGGCVLLAWGWSALGEVDMLTAYFATSP 309 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTR 159 GGA +++A+A A + LV +Q R+LFV A L R Sbjct: 310 GGADSVLAIALGTHASLTLVLAVQVGRLLFVFLVAPLYLR 349 >UniRef50_A3TX86 Putative uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TX86_9RHOB Length = 366 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 136/348 (39%), Gaps = 14/348 (4%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-------------MRGITLQLPRSA 53 L + L + A+ +P +LG ++ I + + + Sbjct: 16 LGLIAIGALGGLAAQALGMPLPFILGSLLLVAIVAQGSALLAASPDRALLPPDFKFNDEF 75 Query: 54 FLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTG 113 ++G I +T +L L A+ L L+ + + R T Sbjct: 76 RAIFIGVIGMAIGTRITIEVLQNLPKAAFSFAALTLFVPLTFWVNYLIFRRIGRYDHATA 135 Query: 114 AWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHI 173 + +SPGG + + GAD+R + Q+LR++FV + + +G + Sbjct: 136 LFSASPGGLYESIMYGEQAGADMRQLMLAQFLRIIFVVTLLPVGMSLYIGHPVGSAAGLG 195 Query: 174 -VWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLL 232 +L + L+ V+ +G L LP+ +L P+L GAV+ ++LP W+L Sbjct: 196 LAPADTGLEHLPVAALVLVLGLVLGHRLHLPAAQLLGPLLLGAVVTLSGFAVLDLPNWML 255 Query: 233 AMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAY 292 +++ + IG +G F + +LS+ A++ I MA L F Sbjct: 256 SVSQIVIGTTLGTRFVGIRPRMMINGAGLGILSVAAMMLIGTAMALVLRPLTGEHFDVLL 315 Query: 293 LATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 ++ +PGG+ +A++A NA+ A + R+ + AR S Sbjct: 316 ISFAPGGVTEMALVALSLNANPAFVTLHHLYRIILTVFVIGHAARRYS 363 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 57/177 (32%), Gaps = 12/177 (6%) Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPE------------WL 231 L I + + G L +P +L +L A++ G + P+ Sbjct: 16 LGLIAIGALGGLAAQALGMPLPFILGSLLLVAIVAQGSALLAASPDRALLPPDFKFNDEF 75 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 A+ IG IG ++L + + R D TA Sbjct: 76 RAIFIGVIGMAIGTRITIEVLQNLPKAAFSFAALTLFVPLTFWVNYLIFRRIGRYDHATA 135 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + SPGGL + + ADM +M Q LR+ ++ P + +A Sbjct: 136 LFSASPGGLYESIMYGEQAGADMRQLMLAQFLRIIFVVTLLPVGMSLYIGHPVGSAA 192 >UniRef50_B1HT63 Protein abrB (AidB regulator) n=2 Tax=Bacillaceae RepID=B1HT63_LYSSC Length = 314 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 73/308 (23%), Positives = 140/308 (45%), Gaps = 9/308 (2%) Query: 27 AALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVL 85 LLG + A +I + + L+ S + G I T + + + ++ Sbjct: 1 MPWLLGAITAVLIVQLSTNVQLRWHSSFRNFGLIVAGYSIGFAFTPEAVQDIKLFLGSIV 60 Query: 86 AILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGA-DIRLVAFMQY 144 I ++ +L V +L+ + + L T PGG A +VA A++ G D+ ++ F Q Sbjct: 61 VINVIFILLFFGVSYLVAKRTDLDFATALTCCVPGGMAQVVAFAEEQGDMDMVVITFFQI 120 Query: 145 LRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPS 204 LRVL + G L+ + G++ + + L+ +++ +AG + L++P+ Sbjct: 121 LRVLLIVGFVPLMLTDVGGNS-------TMSNGMYTWGLVGILIVCGLAGWIAQKLKIPT 173 Query: 205 GTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILL 264 G ML P+ + + +P LL +A + +G IGL K+ L + R + + Sbjct: 174 GYMLGPVFLLMGINMVGIEVPRIPVSLLHIAQLMVGIHIGLLLKKEDLHLSKRHIFYAFV 233 Query: 265 SIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLR 324 S + G+ + + +DF T +L+ PGGLD + +IAA +A++ ++ A Q R Sbjct: 234 SAGIYIGAAYGLTFLMKSLYSLDFRTGFLSIVPGGLDQMGIIAASVHANVTIVTAFQLFR 293 Query: 325 LFSILLTG 332 + I + Sbjct: 294 ILVISIFL 301 Score = 70.6 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 1/146 (0%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGCMIAQN 68 ++ L + +P +LGP+ + +M GI + ++P S AQ ++G I Sbjct: 156 LIVCGLAGWIAQKLKIPTGYMLGPVFLLMGINMVGIEVPRIPVSLLHIAQLMVGIHIGLL 215 Query: 69 LTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAM 128 L L + + + ++ + +L+ SL TG PGG M + Sbjct: 216 LKKEDLHLSKRHIFYAFVSAGIYIGAAYGLTFLMKSLYSLDFRTGFLSIVPGGLDQMGII 275 Query: 129 AQDYGADIRLVAFMQYLRVLFVAGAA 154 A A++ +V Q R+L ++ Sbjct: 276 AASVHANVTIVTAFQLFRILVISIFL 301 >UniRef50_Q5HNN7 Membrane protein, putative n=14 Tax=Staphylococcus RepID=Q5HNN7_STAEQ Length = 355 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 133/323 (41%), Gaps = 6/323 (1%) Query: 23 VHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 +H+ + GP++A ++ + + ++ P +LG I T ++ ++ NW Sbjct: 25 LHVILPFMFGPILAALLCVKVLKLKIRWPFWLSQIGLILLGVQIGSTFTQQVIKDISKNW 84 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQD-YGADIRLVA 140 ++ + ++ +L + I+ + + + + T PG + M+ MA++ A+I +V+ Sbjct: 85 LTIVFVTILLILLALIIAFFFKKIAQVNLETAILSVIPGALSQMLVMAEENKKANILVVS 144 Query: 141 FMQYLRVLFVAGAAVLVTRMMLGDNAE----AVNQHIVWFPPVSINLLLTILLAVVAGTV 196 Q RV+FV L++ ++ E + + +++ + + Sbjct: 145 LTQTSRVIFVVILVPLISYFFQDNHHEMNHTTMEVPTLSQTLNIWQIIILFSMVGIIYIG 204 Query: 197 GCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRAL 256 + P+ +L P++ + +T L WLLA A + RIGL + Sbjct: 205 MSKINFPTKQLLAPIIVLIIWNMTTHLTFSLDHWLLATAQLIYMIRIGLQIANLMSDLKG 264 Query: 257 RPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMAL 316 R I L+ M G+ + +L +PGG+ + ++A + AD+A+ Sbjct: 265 RIAIAIAFQNIMLIVTTFIMIIGIHLITNESINELFLGAAPGGMSQIVLVAMATGADVAM 324 Query: 317 IMAMQTLRLFSILLTGPAIARFI 339 I + R+F IL + + Sbjct: 325 ISSYHIFRIFFILFVIAPLIGYF 347 Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 67/159 (42%), Gaps = 1/159 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGC 63 Q +L + ++ IG ++ P LL P+I II++M +T L AQ I Sbjct: 190 QIIILFSMVGIIYIGMSKINFPTKQLLAPIIVLIIWNMTTHLTFSLDHWLLATAQLIYMI 249 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I + + + ++ ++++ I+ + ++ N G++PGG + Sbjct: 250 RIGLQIANLMSDLKGRIAIAIAFQNIMLIVTTFIMIIGIHLITNESINELFLGAAPGGMS 309 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 +V +A GAD+ +++ R+ F+ + + Sbjct: 310 QIVLVAMATGADVAMISSYHIFRIFFILFVIAPLIGYFI 348 >UniRef50_A0NRD3 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRD3_9RHOB Length = 349 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 136/341 (39%), Gaps = 3/341 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 + + +++ F + LPAA L G M+ I ++ + +P A ++G Sbjct: 12 RLAVTLLIATAGGALFNLLGLPAAWLSGAMVFVAIATLAQVPTLMPALLRDALFIMIGIS 71 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + + I+ +A + +L V + + +L + T +GS PG + Sbjct: 72 MGAGVHPDIVERVAEWPVSMAMLLAVMVAVTFAGYAVLHYGAKWSKETAFFGSIPGALSY 131 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 ++A+A + GAD+ +A Q LR+ + + + + L Sbjct: 132 VMALATERGADLPRIASSQSLRLFVLVAVLPFAV---VSSAEPTGIGGSTVYVSGLKDFL 188 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 + I L + A + R+P G + A L + L+ + LP +++ ++ +G IG Sbjct: 189 IGIPLCLAASWLAVKTRVPGGGLTGAFFMSAGLNASGLLVLVLPNYIVLPCFVMMGAHIG 248 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 F L + + L + + A AW + + I F A LA +PGGL+ + Sbjct: 249 CRFGNMTLRQFVSVLGASIAAFAAAFLTSLAGAWMVAEMVDIPFGQALLAYAPGGLEVMT 308 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 ++A + D A + A Q R ++L P I + Sbjct: 309 LLAFMLDLDPAFVAAHQIARFTGMVLLLPFITGLVLGRRSN 349 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 1/165 (0%) Query: 172 HIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 + F + L +T+L+A G + LL LP+ + M+ A+ Q+ T+ +P L Sbjct: 2 PDISFQSAAGRLAVTLLIATAGGALFNLLGLPAAWLSGAMVFVAIATLAQVPTL-MPALL 60 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 ++ IG +G G I+ R + + + ++A+ L TA Sbjct: 61 RDALFIMIGISMGAGVHPDIVERVAEWPVSMAMLLAVMVAVTFAGYAVLHYGAKWSKETA 120 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 + + PG L V +A AD+ I + Q+LRLF ++ P Sbjct: 121 FFGSIPGALSYVMALATERGADLPRIASSQSLRLFVLVAVLPFAV 165 >UniRef50_A8Z2I6 Possible ammonia monooxygenase n=51 Tax=Staphylococcus aureus RepID=A8Z2I6_STAAT Length = 357 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 148/354 (41%), Gaps = 7/354 (1%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQA 59 M ++ VLS +SI + H+ + GP+IA II + + ++ P Sbjct: 3 MIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIV 62 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +LG I T +++ + NW ++ + + LL + ++ ++ + + + T P Sbjct: 63 LLGVQIGSTFTKNVVMDIKNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIP 122 Query: 120 GGAAAMVAMAQ-DYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPP 178 G M+ MA+ D A++ +V+ Q R++FV ++ N A + P Sbjct: 123 GALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFISYFFHDGNMHANGKLTKVLPL 182 Query: 179 VSI----NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 + +++ + + + ++ P+ +L P++ V +T L WLL M Sbjct: 183 SQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLLNM 242 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 A + RIG+ + R I + L+ M + + F + +L Sbjct: 243 AQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLG 302 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQ-TLRLFSILLTGPAIARFISTYAPKRS 347 +PGG++ + ++A + AD+A+I + F + + P I F+ + KR Sbjct: 303 AAPGGVNQIVLVALATGADVAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRE 356 >UniRef50_C4ZKZ9 Membrane protein AbrB duplication n=1 Tax=Thauera sp. MZ1T RepID=C4ZKZ9_THASP Length = 352 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 67/339 (19%), Positives = 127/339 (37%), Gaps = 2/339 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 Q L+ L +HLP ++GP+ A M L+ Q +G Sbjct: 12 WRQILPTLALATLAGWLAERLHLPLPWMIGPLFAVAGARMADRDLRPLPGGRQTGQWAIG 71 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + + ++ L+++ P+V+A L +L+ ++L+R + T + + PGGA Sbjct: 72 AALGLYFSPEVVAQLSLHAPLVIAAALGSLVLGMAYAFILLRLGGVDAPTAFFAALPGGA 131 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 + M +A +G + +A +RV+ V ++ Sbjct: 132 SEMANLADRHGGAVDRIAAAHAIRVMMVVSVLPFALTFAGVQGSDVYVPLARDVDAQHFP 191 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LL+ L V LLR+ + +L P+L A+ + LP W++ + IG Sbjct: 192 LLVGASLLGVGA--FKLLRIANAWVLGPLLGVALATLAGVPLSALPPWVVNGGQLLIGCA 249 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G F + A R + L+ + + +A L + T LAT+PGG+ Sbjct: 250 LGCRFSRAFFRAAPRFMSVAALTGAMSIVLAFALATLLGLVAEVPLSTLALATAPGGVSE 309 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 + + A + L+ LR+ + + Sbjct: 310 MCITAKVLQLGVPLVTVCHVLRVVVLTVGAQWSFGIFRR 348 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 1/170 (0%) Query: 169 VNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELP 228 ++ +L T+ LA +AG + L LP M+ P+ A A + LP Sbjct: 1 MSALSTLRLAAWRQILPTLALATLAGWLAERLHLPLPWMIGPLFAVAGARMADRDLRPLP 60 Query: 229 EWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDF 288 AIG +GL F +++ + P ++ + L + A+ L R +D Sbjct: 61 GG-RQTGQWAIGAALGLYFSPEVVAQLSLHAPLVIAAALGSLVLGMAYAFILLRLGGVDA 119 Query: 289 MTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 TA+ A PGG +A +A + I A +R+ ++ P F Sbjct: 120 PTAFFAALPGGASEMANLADRHGGAVDRIAAAHAIRVMMVVSVLPFALTF 169 >UniRef50_Q4KE96 Ammonia monooxygenase family protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KE96_PSEF5 Length = 356 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 129/342 (37%), Positives = 205/342 (59%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 LQW +L+ + + +PA LGPM+ I+F + G ++++PR AF Q +G Sbjct: 15 ALQWPAWLLLAGISGQLLKYLEIPAGQFLGPMLTAILFGVCGASIRVPRLAFRLGQGSVG 74 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + A ++T ++LT + +W ++L L+T+ SA+VG +LVR+ ++ +T AWG++PG A Sbjct: 75 MLAAHSMTLAVLTAMLQSWHVMLVATLLTVSLSALVGLVLVRFGAIAASTAAWGTAPGAA 134 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 +AMV+MA ++GAD R+VA MQY+RV+ V LV+ + + + Sbjct: 135 SAMVSMADEFGADSRVVATMQYVRVVCVVMVGALVSHWIGAPASGSEAHASQMALHGMSL 194 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 + + + + V R+P+G +L+P+L G LQ L+ I LP WLLA AY AIG Sbjct: 195 PNVGLSIVAIVCGVLLGSRVPAGALLVPLLLGGALQVSGLLQISLPSWLLACAYGAIGGY 254 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGL FD+ L LP ++ L+A+CA AWGL +M DF++ YLATSPGGLD Sbjct: 255 IGLRFDRPTLSYVFGHLPAMIGGALLLIALCALSAWGLALWMGKDFLSFYLATSPGGLDA 314 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 +A+IA +++D+ L++AMQTLRLF+++++G AR I ++ Sbjct: 315 MAIIAVDTHSDVGLVLAMQTLRLFAVIVSGAFFARLIIKWSR 356 Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 1/171 (0%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 P ++ +LLA ++G + L +P+G L PML + +I +P + Sbjct: 13 PQALQWPAWLLLAGISGQLLKYLEIPAGQFLGPMLTAILFGVCG-ASIRVPRLAFRLGQG 71 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 ++G +L L+ +L++ +++ A + L RF I TA T+P Sbjct: 72 SVGMLAAHSMTLAVLTAMLQSWHVMLVATLLTVSLSALVGLVLVRFGAIAASTAAWGTAP 131 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 G + +A AD ++ MQ +R+ +++ G ++ +I A A Sbjct: 132 GAASAMVSMADEFGADSRVVATMQYVRVVCVVMVGALVSHWIGAPASGSEA 182 >UniRef50_C2BYG7 Possible ammonia monooxygenase n=1 Tax=Listeria grayi DSM 20601 RepID=C2BYG7_LISGR Length = 365 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 81/354 (22%), Positives = 149/354 (42%), Gaps = 10/354 (2%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAI 60 V + + + L + + +HLP LLGPM I I+ I L P LAA I Sbjct: 12 TVFPFLLTILAGLAGAGLAMLIHLPIPWLLGPMLIITILNQFDKIPLHFPAILRLAALMI 71 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G +T + + PI++ +V +L + + + ++++L + GS PG Sbjct: 72 VGYTAGTKITLATFKLIISQLPIMVITTIVLILIGILFSYFISKWTTLDYQSLVAGSMPG 131 Query: 121 GAAAMVAMAQDYGA-DIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV 179 GA M+ A++ D +V+ Q R++ + ++ L Sbjct: 132 GATQMILYAREQKHLDPTIVSIFQIFRLVTIFLFVPIILYTPLIGAHHQSQAVATHNAAS 191 Query: 180 --------SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 ++L ++ +V +G LRLP +L P+L +L + +P + Sbjct: 192 DYFLSQFPWASILFFLIAVLVFSDLGRFLRLPIHQLLGPLLGIGILNIFGIHGFNVPHGI 251 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 + +A+G GLG + + ++S LL G++ L + H T Sbjct: 252 IGATQLALGIYFGLGINLKGNANKATLFISAIISNIVLLFCMVGISLLLNQLFHYGETTT 311 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 YLA PGG+D +++IA +A++ L++ QT R S+ L P + + + K Sbjct: 312 YLAIVPGGMDQISLIATTISANVGLVVGYQTFRSISVNLIAPFVFKHLLQERNK 365 Score = 87.2 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 1/168 (0%) Query: 171 QHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEW 230 + LLTIL + + L+ LP +L PML +L I + P Sbjct: 4 TKQLPIKKTVFPFLLTILAGLAGAGLAMLIHLPIPWLLGPMLIITILNQFDKIPLHFPAI 63 Query: 231 LLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMT 290 L A M +G+ G + LP ++++ L+ I ++ ++++ +D+ + Sbjct: 64 LRLAALMIVGYTAGTKITLATFKLIISQLPIMVITTIVLILIGILFSYFISKWTTLDYQS 123 Query: 291 AYLATSPGGLDTVAVIA-AGSNADMALIMAMQTLRLFSILLTGPAIAR 337 + PGG + + A + D ++ Q RL +I L P I Sbjct: 124 LVAGSMPGGATQMILYAREQKHLDPTIVSIFQIFRLVTIFLFVPIILY 171 >UniRef50_D2RND1 Membrane protein AbrB duplication n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RND1_ACIFE Length = 356 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 9/333 (2%) Query: 23 VHLPAALLLGPMIAG-IIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 + +P +LG + G ++ + T PRS + G I N T L+ Sbjct: 20 LSVPIPYMLGGIAVGFLLRTFLDNTFFWPRSWRGLMLGVAGYGIGSNCTPDTFFKLSQET 79 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYG-ADIRLVA 140 L L TL S V + R++ + G PGG AM + DY AD +V Sbjct: 80 LGTLGASLFTLAVSVAVAVYMHRHTFANLLSSIMGCLPGGLTAMTVLMDDYEEADENVVV 139 Query: 141 FMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPP-------VSINLLLTILLAVVA 193 Q LR+ V + L+ + G + +W LL + + +V Sbjct: 140 VSQCLRLFVVEISVPLLAINLFGGQVTRLAGVGLWDASRADFLSLFHPGWLLVVPVVLVG 199 Query: 194 GTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILL 253 T+ + +P+G +L P++ A+L +P +A A + IG IG D++ LL Sbjct: 200 QTLAKKIHMPTGQLLGPIMITALLALWMGRVPRVPAPAMAFAQLHIGLYIGTMLDREKLL 259 Query: 254 RALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 + +P +LL ++A AG++ L+R +TA+LA +PGG+ + + + D Sbjct: 260 KTRALIPNVLLGSLLMVASSAGLSLLLSRLYGFTTLTAFLALAPGGIAEMCLTGLEMHQD 319 Query: 314 MALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 +A+I+ Q +R+ + + P + R + ++ Sbjct: 320 VAVILTYQLVRVLMLAMGVPFVIRKFFKPSGEK 352 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 1/162 (0%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCM 64 W ++ + L+ +H+P LLGP++ + ++ G ++P A AQ +G Sbjct: 189 WLLVVPVVLVGQTLAKKIHMPTGQLLGPIMITALLALWMGRVPRVPAPAMAFAQLHIGLY 248 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 I L L P VL L+ + SSA + LL R T +PGG A Sbjct: 249 IGTMLDREKLLKTRALIPNVLLGSLLMVASSAGLSLLLSRLYGFTTLTAFLALAPGGIAE 308 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNA 166 M + D+ ++ Q +RVL +A V R + Sbjct: 309 MCLTGLEMHQDVAVILTYQLVRVLMLAMGVPFVIRKFFKPSG 350 >UniRef50_A3VKP5 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VKP5_9RHOB Length = 355 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 138/323 (42%), Gaps = 6/323 (1%) Query: 21 LAVHLPAALLLGPMIAGIIFSM-----RGITLQLPRSAFLAAQAILGCMIAQNLTGSILT 75 + P +LG +I +M P ++G MI ++ +LT Sbjct: 27 QWIGTPLPFMLGSLIMAAAGAMAFGDRFPQGYSYPLPFRQLFVGVIGVMIGAQVSPDLLT 86 Query: 76 TLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGAD 135 + AILL +L+ + + + L T + SPGG +A +D GAD Sbjct: 87 LAPKLLVSIPAILLFVVLAHSANYLIFRKVGKLDRATAYYSGSPGGLLESIAFGEDAGAD 146 Query: 136 IRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV-SINLLLTILLAVVAG 194 IR++ +Q+LR++ V + G+ + P ++++L +L +V Sbjct: 147 IRVLTILQFLRIIVVVAVLPFAISIYEGEPVGSAAGLTTSADPAIWLDVVLVMLFSVAGV 206 Query: 195 TVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 +G ++LP+ + P+ V + ++ + +P WL+A A + +G +GL F Sbjct: 207 WLGGKVKLPASQLAGPLFLVGVATATGIVDLNIPGWLVASAQVVVGISLGLRFVGITRRM 266 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 + L LLS ++L I A ++ + R T ++ +PGG+ +++IA A+ Sbjct: 267 MISGLGLSLLSGASMLGIGAILSLIVARLTDFSLETLIISFAPGGVTEMSLIALSLAANP 326 Query: 315 ALIMAMQTLRLFSILLTGPAIAR 337 + +R+ + ++ + + Sbjct: 327 TFVTLHHLVRIVATVVELAVVRK 349 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 1/156 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAIL 61 L ++ + S+ V LPA+ L GP+ + + G + L +P +AQ ++ Sbjct: 192 WLDVVLVMLFSVAGVWLGGKVKLPASQLAGPLFLVGVATATGIVDLNIPGWLVASAQVVV 251 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + G + + L L AI+ ++ R + T +PGG Sbjct: 252 GISLGLRFVGITRRMMISGLGLSLLSGASMLGIGAILSLIVARLTDFSLETLIISFAPGG 311 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLV 157 M +A A+ V +R++ +V Sbjct: 312 VTEMSLIALSLAANPTFVTLHHLVRIVATVVELAVV 347 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 4/155 (2%) Query: 198 CLLRLPSGTMLIPMLAGAVLQSG----QLITIELPEWLLAMAYMAIGWRIGLGFDKQILL 253 + P ML ++ A P + IG IG +L Sbjct: 27 QWIGTPLPFMLGSLIMAAAGAMAFGDRFPQGYSYPLPFRQLFVGVIGVMIGAQVSPDLLT 86 Query: 254 RALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNAD 313 A + L I + ++ + + +D TAY + SPGGL + AD Sbjct: 87 LAPKLLVSIPAILLFVVLAHSANYLIFRKVGKLDRATAYYSGSPGGLLESIAFGEDAGAD 146 Query: 314 MALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + ++ +Q LR+ ++ P +A Sbjct: 147 IRVLTILQFLRIIVVVAVLPFAISIYEGEPVGSAA 181 >UniRef50_D0S7S8 Putative uncharacterized protein n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0S7S8_ACICA Length = 352 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 139/328 (42%), Gaps = 1/328 (0%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNL 69 ++L+ ++ +++P LLGP++ ++F G L Q I+G + Sbjct: 15 LAIALVGALIAKYLYIPLPWLLGPLLTALLFGSVGHPLACDPHWRRIGQVIIGMALGLYF 74 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T +++ +A W +L L +L+ ++ L R ++L T + S+ G A+ MV +A Sbjct: 75 TPALVQAVAAYWGFILIGLAWSLVLGTLLAGLQYRVNALDWATAWFSSAIGSASEMVNIA 134 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILL 189 + Y A + V LR++ + + + + V ++L L Sbjct: 135 ERYQAQVEKVVAAHSLRIVVLVVLVPIFMELYFQVEWTGLKIP-VSDQFSFFQVVLLFGL 193 Query: 190 AVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDK 249 A+ G V L + +L P+ +L ++ ++LPEW A + IGW +G F Sbjct: 194 ALFVGKVFQFFNLLNAWILGPLAIIGLLSFCGILQMKLPEWFTAFGQVCIGWSLGSKFPF 253 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 L + + + L+ L + A L H + L SPGG+ ++++A Sbjct: 254 SFLKKNKKFIGITLIFNLLALVLSISFALLLVNLSHTEKQILILGLSPGGIAEMSLMAKA 313 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIAR 337 + +++A Q RL ++LT + Sbjct: 314 LGLAVPIVVAFQLSRLIFVILTTRFFYQ 341 Score = 74.5 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 62/159 (38%), Gaps = 1/159 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAI 60 Q +L L+L + F +L A +LGP+ + S G + ++LP Q Sbjct: 183 SFFQVVLLFGLALFVGKVFQFFNLLNAWILGPLAIIGLLSFCGILQMKLPEWFTAFGQVC 242 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G + S L I L L+ L+ S LLV S G SPG Sbjct: 243 IGWSLGSKFPFSFLKKNKKFIGITLIFNLLALVLSISFALLLVNLSHTEKQILILGLSPG 302 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTR 159 G A M MA+ G + +V Q R++FV + Sbjct: 303 GIAEMSLMAKALGLAVPIVVAFQLSRLIFVILTTRFFYQ 341 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 1/152 (0%) Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 + +A+V + L +P +L P+L + S P W + + IG +GL Sbjct: 15 LAIALVGALIAKYLYIPLPWLLGPLLTALLFGSVGHPLACDPHW-RRIGQVIIGMALGLY 73 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 F ++ IL+ + L + +A R +D+ TA+ +++ G + I Sbjct: 74 FTPALVQAVAAYWGFILIGLAWSLVLGTLLAGLQYRVNALDWATAWFSSAIGSASEMVNI 133 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 A A + ++A +LR+ +++ P Sbjct: 134 AERYQAQVEKVVAAHSLRIVVLVVLVPIFMEL 165 >UniRef50_A6VAM6 Membrane protein, putative n=20 Tax=Pseudomonas RepID=A6VAM6_PSEA7 Length = 345 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 78/343 (22%), Positives = 138/343 (40%), Gaps = 5/343 (1%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAI 60 + ++ L V P ++G ++A ++ + + L A Q I Sbjct: 6 TWKLYWATPLVGALGGWLASLVGWPLPWMIGSLLAVMLVRCLADLPLAEVPGARKCGQWI 65 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G I + T +++ + + I++ + T LSS + + +R S T + S PG Sbjct: 66 VGIGIGLHFTPAVIEQVLAHSAIIVFGAVATTLSSVL-AIVFLRRSGEDRATAFFASMPG 124 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 GA+ MV + Q +GA + VA Q LR+L V + +LG +Q P Sbjct: 125 GASEMVNLGQRHGAVLSRVAAAQSLRLLLVVLLVPAAFQYLLGGGQPGPHQAA---PVDW 181 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 L L + LR P+ +L P+L A + G + I LP + IG Sbjct: 182 RWLALLFPAGALVALGWQKLRQPNPWLLGPLLLAASVSLGFDLHIGLPAGSSGVGQWLIG 241 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 +G F++ A + + L+ ++ A A L +D + L PGG+ Sbjct: 242 SALGCHFNRSFFRSAPAFVSRTLVCTLWMMLAAALTAELLGWLSTLDHQSLMLGMMPGGI 301 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 +++ A + L+ A+Q LRL +L R+ + A Sbjct: 302 AELSLTAEALQFSVPLVTALQVLRLLLVLFLAEPCFRYWTKRA 344 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 1/169 (0%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 T L+ + G + L+ P M+ +LA +++ + + Sbjct: 6 TWKLYWATPLVGALGGWLASLVGWPLPWMIGSLLAVMLVRCLADLPLAEVPGARKCGQWI 65 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 +G IGL F ++ + L I++ + + +A R D TA+ A+ PG Sbjct: 66 VGIGIGLHFTPAVIEQVLAH-SAIIVFGAVATTLSSVLAIVFLRRSGEDRATAFFASMPG 124 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 G + + A ++ + A Q+LRL ++L PA +++ Sbjct: 125 GASEMVNLGQRHGAVLSRVAAAQSLRLLLVVLLVPAAFQYLLGGGQPGP 173 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 57/142 (40%), Gaps = 1/142 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQA 59 + +L L+++G+ + P LLGP++ S+ + + LP + Q Sbjct: 179 VDWRWLALLFPAGALVALGWQKLRQPNPWLLGPLLLAASVSLGFDLHIGLPAGSSGVGQW 238 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G + + S + L L +L++A+ LL S+L + G P Sbjct: 239 LIGSALGCHFNRSFFRSAPAFVSRTLVCTLWMMLAAALTAELLGWLSTLDHQSLMLGMMP 298 Query: 120 GGAAAMVAMAQDYGADIRLVAF 141 GG A + A+ + LV Sbjct: 299 GGIAELSLTAEALQFSVPLVTA 320 >UniRef50_A8LSV3 Putative uncharacterized protein n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LSV3_DINSH Length = 342 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 72/336 (21%), Positives = 132/336 (39%), Gaps = 1/336 (0%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNL 69 ++L F + LP LLGP+ A + +M G+ ++ + A + +LG + L Sbjct: 8 FAVALAGVGLFQWLDLPLPWLLGPIFACLTAAMLGVPMRSLKPINEATRMVLGVAVGATL 67 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T +L T WP ++ + ++ + + R T + + PGG M+ Sbjct: 68 TPPVLATFPAMWPTLMLVPVMVVAIGLVGVPYFRRLWGYDPATAYYSAMPGGLQDMLLFG 127 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILL 189 ++ G ++R ++ + RV + A + + + G + + PV + L L Sbjct: 128 EEAGGNVRTLSLIHATRVTVIVVALPFLLKGVWGADLGNPPGASLGVVPVH-EMGLMGLC 186 Query: 190 AVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDK 249 A+V + L +L PM+ L+ P + A IG IG + Sbjct: 187 AIVGWWGARRIGLFGAAILGPMIVTGAAAMSGLLENRPPAEAIWAAQFFIGVTIGCKYVG 246 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 R L L L+ + G+ M LA +PGG + V+A Sbjct: 247 ITWGEIRRDLAAGLGFCGILIVLTLIFVEGVYLAGLAPGMETLLAFAPGGQAELTVLALI 306 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 AD+A ++A LR+F ++L P + R + + Sbjct: 307 VGADVAFVVAHHILRIFVVILGAPIVVRMLGDKDAR 342 Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 1/167 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQA 59 +PV + G++ + +++ G + L A +LGPMI +M G + + P A AAQ Sbjct: 175 VPVHEMGLMGLCAIVGWWGARRIGLFGAAILGPMIVTGAAAMSGLLENRPPAEAIWAAQF 234 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +G I G + + L + ++ + I + PG +P Sbjct: 235 FIGVTIGCKYVGITWGEIRRDLAAGLGFCGILIVLTLIFVEGVYLAGLAPGMETLLAFAP 294 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNA 166 GG A + +A GAD+ V LR+ V A +V RM+ +A Sbjct: 295 GGQAELTVLALIVGADVAFVVAHHILRIFVVILGAPIVVRMLGDKDA 341 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 1/158 (0%) Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 I + +A+ + L LP +L P+ A + L + + M + Sbjct: 1 MIGIFTAFAVALAGVGLFQWLDLPLPWLLGPIFACLTAAMLGVPMRSL-KPINEATRMVL 59 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G +G +L P ++L ++AI R D TAY + PGG Sbjct: 60 GVAVGATLTPPVLATFPAMWPTLMLVPVMVVAIGLVGVPYFRRLWGYDPATAYYSAMPGG 119 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 L + + + ++ + + R+ I++ P + + Sbjct: 120 LQDMLLFGEEAGGNVRTLSLIHATRVTVIVVALPFLLK 157 >UniRef50_C4LH35 Putative membrane protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LH35_CORK4 Length = 364 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 95/345 (27%), Positives = 162/345 (46%), Gaps = 3/345 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAI 60 ++ W + + +L+ LP+ L+LG M+ G+ ++ ++ PRS +Q + Sbjct: 13 SLVGWTIAIIATLVAVGLCRVAQLPSPLMLGAMVGGLCGAIIASTRIRPPRSTIGPSQGV 72 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 + + A L S LA L + +TLL A W + R+S++ T + G Sbjct: 73 ISLIAAGPLVNSSPDRLASYALPSLIAIGITLLLCAACAWAITRFSTIDSPTAVMSTLAG 132 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 GA+AM ++++ GAD R V QYLRV V+ + + +++G + + ++ +V S Sbjct: 133 GASAMSVLSEELGADFRYVTVAQYLRVFIVSFSLPFLIPLLVGGDVDVGSEPLVNLSSHS 192 Query: 181 I-NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 I N L+ + + + G + LP+ +L P+ V+ Q I +P L A A++ I Sbjct: 193 IMNWLVVLAVITIPGWLASFTPLPAPRLLAPLAIAIVIGEWQPHLISIPGVLEAAAFVLI 252 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 GW+ G FD+Q L+ + LP L I L+ C MA LT YLAT+PGG Sbjct: 253 GWQAGGAFDRQSLVTNAKRLPLAFLCIIVLMGGCGVMAGILTALGLGTLTETYLATTPGG 312 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 V IA +A ++ MQ R+ +L+ + + I Sbjct: 313 RYIVLAIAHDRDAGP-IVTVMQVTRMIVMLIVTAFVPQLIRALRR 356 >UniRef50_D0DD06 Putative ammonia monooxygenase superfamily protein n=1 Tax=Citreicella sp. SE45 RepID=D0DD06_9RHOB Length = 354 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 83/344 (24%), Positives = 142/344 (41%), Gaps = 3/344 (0%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAILGCM 64 L V++ L + F V P ++GP++ S G+ T+ +P Q + Sbjct: 7 LLTLYVVAALAGVLFSRVGTPLPWMIGPLVIAGALSASGLVTVAVPIRTRPIGQVTIATF 66 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + + T L +L P++L + L L+++ +V + R T +P Sbjct: 67 VGAHFTPDALHSLLQTAPMLLTVSLFILVAAILVAQIQRRVYGTSTVTALLSVTPTSPVE 126 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 +A+ G + V Q R+ V + ++ A V L Sbjct: 127 AGVLAEHMGVNPGPVVLAQTARIALVVTVVPFLLQLGA--PPGAAPLAPVLHHGSLPGLA 184 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 +T+ A++ + LLR + L P+ A+ S L + E+P LLA+A + +G +G Sbjct: 185 VTLGGALLGPVLFRLLRFSNPFFLGPLFLAALFSSVGLPSYEIPGPLLAIAQIVLGTWLG 244 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 F +++L + + +LLS LL C AWGL+ F T L +PGG+ +A Sbjct: 245 SSFRRELLEQRGALIGSVLLSSSLLLGACVLGAWGLSALFGAPFPTVMLGIAPGGVTEMA 304 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + A D+AL+ AM R+F I+ IAR R Sbjct: 305 LTAGVLGQDVALVTAMHLTRIFVIMPNLGWIARVTHRLDGARRG 348 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 63/158 (39%) Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 LL ++A +AG + + P M+ P++ L + L+T+ +P + + I Sbjct: 4 LQPLLTLYVVAALAGVLFSRVGTPLPWMIGPLVIAGALSASGLVTVAVPIRTRPIGQVTI 63 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 +G F L L+ P +L +L +A R +TA L+ +P Sbjct: 64 ATFVGAHFTPDALHSLLQTAPMLLTVSLFILVAAILVAQIQRRVYGTSTVTALLSVTPTS 123 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 V+A + ++ QT R+ ++ P + + Sbjct: 124 PVEAGVLAEHMGVNPGPVVLAQTARIALVVTVVPFLLQ 161 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 59/171 (34%), Gaps = 1/171 (0%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGCM 64 + +LL + F + LGP+ +FS G+ ++P AQ +LG Sbjct: 183 LAVTLGGALLGPVLFRLLRFSNPFFLGPLFLAALFSSVGLPSYEIPGPLLAIAQIVLGTW 242 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + + +L VL + L + + W L P T G +PGG Sbjct: 243 LGSSFRRELLEQRGALIGSVLLSSSLLLGACVLGAWGLSALFGAPFPTVMLGIAPGGVTE 302 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW 175 M A G D+ LV M R+ + + R+ + + Sbjct: 303 MALTAGVLGQDVALVTAMHLTRIFVIMPNLGWIARVTHRLDGARRGRPEPG 353 >UniRef50_B0UQK6 Membrane protein AbrB duplication n=9 Tax=Proteobacteria RepID=B0UQK6_METS4 Length = 361 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 163/343 (47%), Positives = 234/343 (68%), Gaps = 1/343 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 QW L S LS A PAALLLGPM+A I F + G +++P++AFLAAQA++GC+ Sbjct: 18 QWVGLVAASAALSALLSAAGFPAALLLGPMLAAIGFGVSGAAIRVPKAAFLAAQALIGCL 77 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 +A + SI+ TL + ++LA++ VT+L+SA VGW+L R LPG T AWGSSPG AAA Sbjct: 78 VAHAVNASIVQTLMADGLLMLAVVGVTVLASAAVGWVLTRIRLLPGTTAAWGSSPGAAAA 137 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 MVAMA++YGAD RLVAFMQY+RV VA +A +V R ++G A A V P + +L Sbjct: 138 MVAMAEEYGADPRLVAFMQYVRVACVALSASIVARFLVGHAAPAALPEPVGAPE-PLAVL 196 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 +T+ +A + +G L +PSG M+ P++ GA L +G L ++ LP+WLLA+AY A+GW +G Sbjct: 197 VTLAVAALGSWLGRRLNIPSGAMIGPLVIGATLHAGGLASMSLPDWLLALAYAAVGWTVG 256 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 L F + + + LP +L + L+A+C A+GLT + ID +TA+LATSPGGLD+VA Sbjct: 257 LRFTRATVRATVSALPGVLAATLGLIALCGLWAFGLTFLLPIDLLTAFLATSPGGLDSVA 316 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 +IA GS AD++ ++A+QTLRL +++TGP +A++IS R+ Sbjct: 317 IIAVGSKADVSFVLAVQTLRLLVVIITGPLVAKWISAKWSSRA 359 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 1/170 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAIL 61 L + ++ L S +++P+ ++GP++ G G+ ++ LP A A + Sbjct: 192 PLAVLVTLAVAALGSWLGRRLNIPSGAMIGPLVIGATLHAGGLASMSLPDWLLALAYAAV 251 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + T + + P VLA L + + + L + T +SPGG Sbjct: 252 GWTVGLRFTRATVRATVSALPGVLAATLGLIALCGLWAFGLTFLLPIDLLTAFLATSPGG 311 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ 171 ++ +A AD+ V +Q LR+L V LV + + + Sbjct: 312 LDSVAIIAVGSKADVSFVLAVQTLRLLVVIITGPLVAKWISAKWSSRAVA 361 Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 1/173 (0%) Query: 175 WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 + + + + + P+ +L PMLA I +P+ Sbjct: 11 STAVAAPQWVGLVAASAALSALLSAAGFPAALLLGPMLAAIGFGVSG-AAIRVPKAAFLA 69 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 A IG + + I+ + +L + + A + W LTR + TA Sbjct: 70 AQALIGCLVAHAVNASIVQTLMADGLLMLAVVGVTVLASAAVGWVLTRIRLLPGTTAAWG 129 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 +SPG + +A AD L+ MQ +R+ + L+ +ARF+ +A + Sbjct: 130 SSPGAAAAMVAMAEEYGADPRLVAFMQYVRVACVALSASIVARFLVGHAAPAA 182 >UniRef50_B6YYA2 Putative ammonia monooxygenase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYA2_9RHOB Length = 351 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 67/335 (20%), Positives = 135/335 (40%), Gaps = 3/335 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 + + ++ + F + PAA L G +A I + G + +P +LG Sbjct: 8 LFNLSITLAIAGAGAGLFSLLGFPAAPLTGSALAVSIGGLLGAPVTVPLWLRTLCFIVLG 67 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I +T +++ LA+ + +LS + +LVR+ + SSPG Sbjct: 68 TGIGSGVTPAVIDAAVTWPASFLALGISLILSMLLSRMVLVRFFGFDAYNASLASSPGHL 127 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 + +++MA D AD+ + Q RVLF+ L ++ + + P ++ Sbjct: 128 SYILSMAADAKADVTRIGLAQSTRVLFLTICVPLFITLLFEETGASFLPAQNITPLSAVY 187 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LLL + GT+ ++LP+ +L ML ++ + ++P+W +++ +G Sbjct: 188 LLLGAAV---VGTIFLKMKLPAAYLLGGMLVSSLGHLTEFTPGKMPDWATLSSFLVMGAL 244 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG F + + + + + + ++ ++A +PGG++ Sbjct: 245 IGTRFKGISPELFAKAICAGIAVTIITVGMAILGVLLAMPLVGLNPSLLFVAFAPGGVEA 304 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIAR 337 +A IA S D + A RL + P + R Sbjct: 305 MAAIAVQSGLDPTFVAAHHVFRLLLLTFLVPLLLR 339 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 1/161 (0%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 NL +T+ +A + LL P+ + LA ++ + +P WL + ++ Sbjct: 7 DLFNLSITLAIAGAGAGLFSLLGFPAAPLTGSALAVSIGGLLG-APVTVPLWLRTLCFIV 65 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 +G IG G ++ A+ L +L+ L RF D A LA+SPG Sbjct: 66 LGTGIGSGVTPAVIDAAVTWPASFLALGISLILSMLLSRMVLVRFFGFDAYNASLASSPG 125 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 L + +AA + AD+ I Q+ R+ + + P + Sbjct: 126 HLSYILSMAADAKADVTRIGLAQSTRVLFLTICVPLFITLL 166 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 1/147 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQA 59 + L L + + ++ FL + LPAA LLG M+ + + ++P A L++ Sbjct: 180 ITPLSAVYLLLGAAVVGTIFLKMKLPAAYLLGGMLVSSLGHLTEFTPGKMPDWATLSSFL 239 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G +I G A +A+ ++T+ + + L + L + +P Sbjct: 240 VMGALIGTRFKGISPELFAKAICAGIAVTIITVGMAILGVLLAMPLVGLNPSLLFVAFAP 299 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLR 146 GG AM A+A G D VA R Sbjct: 300 GGVEAMAAIAVQSGLDPTFVAAHHVFR 326 >UniRef50_B6AYQ5 Putative ammonia monooxygenase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AYQ5_9RHOB Length = 354 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 78/346 (22%), Positives = 147/346 (42%), Gaps = 5/346 (1%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIF-----SMRGITLQLPRSAFLAAQAIL 61 + L L F +P +LG M A + S + P A + Sbjct: 9 ALFLALGALGGWIFAFFPVPLPYMLGSMAASALAVAFLPSSITQDSKPPVHLRTPFIASI 68 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G +I + LT+ I L + L T L+ + + R+ T + ++PGG Sbjct: 69 GLLIGAQVHLETLTSWQPIAIIALMVTLFTPLAHWLNYRFMQRFGGYDVPTAFFCAAPGG 128 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 + + + GA++ ++ Q+LR++ V L+ + +G + + S Sbjct: 129 LIEAMTLGERAGANVAILTVQQFLRIVLVVTLIPLLMSIWVGHPVGSAAGLSQFSQAASS 188 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 L + + V +G +LR+P+G ++ PM+ +L S + + LP WL+ +A + IG Sbjct: 189 PLWQIVTVGAVGYALGLMLRIPAGQLMGPMIFAGLLTSTGWLPLTLPNWLIILAQIVIGT 248 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +GL F+ R L L S +LA+ A +A +T + A+L+ +PGG++ Sbjct: 249 TLGLRFNGLSGAIVRRGLILALGSAAVMLALGAVLALLITSLADVSLSAAWLSLAPGGVN 308 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 ++++A AD AL+ R+ ++ A +S R+ Sbjct: 309 EMSLVALSIAADPALVTLAHVYRIALTVMIMSAWYPRLSRPLSPRA 354 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 4/169 (2%) Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIE----LPEWLLAMAYMAI 239 L + L + G + +P ML M A A+ + +I P L +I Sbjct: 9 ALFLALGALGGWIFAFFPVPLPYMLGSMAASALAVAFLPSSITQDSKPPVHLRTPFIASI 68 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G IG + L L+ + RF D TA+ +PGG Sbjct: 69 GLLIGAQVHLETLTSWQPIAIIALMVTLFTPLAHWLNYRFMQRFGGYDVPTAFFCAAPGG 128 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 L + + A++A++ Q LR+ ++ P + + +A Sbjct: 129 LIEAMTLGERAGANVAILTVQQFLRIVLVVTLIPLLMSIWVGHPVGSAA 177 >UniRef50_D1VJI4 Membrane protein AbrB duplication n=1 Tax=Frankia sp. EuI1c RepID=D1VJI4_9ACTO Length = 415 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 104/354 (29%), Positives = 169/354 (47%), Gaps = 8/354 (2%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAI 60 L W L + LLS V +PAA LL M+ G ++ G+ +LP A A+Q + Sbjct: 55 SALGWIALIAICFLLSDLGEHVGIPAAQLLVSMLVGAALALAGVVRRRLPARANRASQVV 114 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G ++ L S L+ ++ + L ++ V L R + G G PG Sbjct: 115 VGVLMGSYLAPSALSAATGRALPLIGVTLASIAICVAVAGALTRRTRATGVDTTLGLMPG 174 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWF---- 176 G+AA+VA A + GAD R VAF QYLRV VA + L+ + + + + + F Sbjct: 175 GSAAIVAYATELGADSRFVAFAQYLRVGVVAASTPLIVAALGRNPGSSHSGRSLSFSHLV 234 Query: 177 --PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEW-LLA 233 P L + ++ + LRLP+ +L PM A + L P L Sbjct: 235 ASPHQVAGLAMLTATGLLGVGLARRLRLPAPALLGPMFLTAAILWTDLTGGFSPAGSLRD 294 Query: 234 MAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 +A++ +G +GL FD + R L +L + A+ CAG+AW L+ + + F +YL Sbjct: 295 IAFVLVGLEVGLRFDLASVRYLGRMLGYLLGASVAVCLACAGLAWALSALVGMSFTDSYL 354 Query: 294 ATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 AT+PGG++ + AA ++AD+ +I A+Q++RL ++ I R + + RS Sbjct: 355 ATTPGGINAILATAASAHADLPVIAAVQSVRLLLVIALTAPIIRAATRWRAFRS 408 Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 69/199 (34%) Query: 149 FVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTML 208 V +A G + + ++ + I + + +G + +P+ +L Sbjct: 25 TVGVSAPGPAGCSTGKSRIFSSATGRARARSALGWIALIAICFLLSDLGEHVGIPAAQLL 84 Query: 209 IPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFA 268 + ML GA L ++ LP + + +G +G L A ++ A Sbjct: 85 VSMLVGAALALAGVVRRRLPARANRASQVVVGVLMGSYLAPSALSAATGRALPLIGVTLA 144 Query: 269 LLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSI 328 +AIC +A LTR + L PGG + A AD + Q LR+ + Sbjct: 145 SIAICVAVAGALTRRTRATGVDTTLGLMPGGSAAIVAYATELGADSRFVAFAQYLRVGVV 204 Query: 329 LLTGPAIARFISTYAPKRS 347 + P I + Sbjct: 205 AASTPLIVAALGRNPGSSH 223 >UniRef50_A6FPC2 Ureidoglycolate hydrolase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FPC2_9RHOB Length = 361 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 63/343 (18%), Positives = 130/343 (37%), Gaps = 1/343 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 ++ + +LL + + P ++G M+ M L +P Q ++ Sbjct: 13 LVHLVAIYAGALLFGLVAHWLRFPLPWMIGAMVFASSVRMLDRPLPVPGQTRQIGQVLVA 72 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + + T + + ++ ++T+ +V L+R + T S P G Sbjct: 73 TSVGLSFTPEAVGAMVSLLIPMVGAAILTIGLGFVVAAFLMRVTRADIITAVLASIPMGP 132 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 +A + V F Q LR++ + + G + V S Sbjct: 133 VESATLAVKHKVRPGPVVFAQTLRIMLLVLLIPPAIVALDGTVKDPVAALSRMEWTASGA 192 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 +LL + V +RL + + + A+ + L P +L +A + +G Sbjct: 193 MLLALA-GVAGAYAARAVRLANPFFVGSLGGAALAAAFSLPITAYPYPVLVLAQVFLGVW 251 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 +G FD+ ++ A +P +++ L+A+C M LT + L+T+PG + Sbjct: 252 LGAVFDRDLVRHARGFIPGAVMASLLLIALCTCMGMALTWITGEKWQVMMLSTAPGSVTE 311 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 +A+ A +A++ A +R+F IL +I + A + Sbjct: 312 MALTAKILEDGLAVVTAFHVVRIFIILPFASSIIDVTARLAQR 354 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 1/177 (0%) Query: 172 HIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 W ++L+ A++ G V LR P M+ M+ + ++ + +P Sbjct: 5 TPDWSLRRLVHLVAIYAGALLFGLVAHWLRFPLPWMIGAMVFASSVRML-DRPLPVPGQT 63 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 + + + +GL F + + + L ++ + + + +A L R D +TA Sbjct: 64 RQIGQVLVATSVGLSFTPEAVGAMVSLLIPMVGAAILTIGLGFVVAAFLMRVTRADIITA 123 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 LA+ P G A +A ++ QTLR+ ++L P + A Sbjct: 124 VLASIPMGPVESATLAVKHKVRPGPVVFAQTLRIMLLVLLIPPAIVALDGTVKDPVA 180 >UniRef50_C1DL52 Ammonia monooxygenase n=3 Tax=Pseudomonadaceae RepID=C1DL52_AZOVD Length = 364 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 131/340 (38%), Gaps = 4/340 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 W + L ++ P ++G ++ G A Q ILG Sbjct: 17 RPWIFTPLAGALGGWLAQSLGWPLPWMIGSLLGVAALRCLGCPSGAVPHGVKAGQWILGI 76 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I + ++L + + +VL L+TLL+S G LL R T + S PGGA Sbjct: 77 GIGLHFNRAVLEQILAHLGLVLLGTLLTLLASIF-GILLHRRYGESFATAYFASMPGGAN 135 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 MV + +GA ++ VA Q LR+ V + D A IV P + L Sbjct: 136 EMVNLGGRHGAVLQNVAAAQSLRMFVVLLGIPATYAWLFADGQAA---DIVHPGPDAAWL 192 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 + L + + P+ L +L + + I LP+ A +G + Sbjct: 193 VPLFALGGLLALLFQRRNFPNAWQLGALLVSGLCSIAFDLHIGLPDGAGAFGQWLVGSTL 252 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G FD+ RA L + LL+ A + I +A ++ +D L PGG+ + Sbjct: 253 GCHFDRAFFRRAPAFLLRTLLTTLAAILIALPIALAMSWASGLDARALLLGMVPGGIAEM 312 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 ++ A + + L+ AMQ LRL +L + R S Sbjct: 313 SLTAEALHLLVPLVTAMQVLRLLLVLFLAAPVFRLCSERL 352 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 2/172 (1%) Query: 168 AVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIEL 227 V + + T L + G + L P M+ +L A L+ + + Sbjct: 4 GVPPSLANLAARCRPWIFTPLAGALGGWLAQSLGWPLPWMIGSLLGVAALRCLGCPSGAV 63 Query: 228 PEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHID 287 P + +G IGL F++ +L + L L +LL L L R Sbjct: 64 PHG-VKAGQWILGIGIGLHFNRAVLEQILAHLGLVLLGTLLTLLAS-IFGILLHRRYGES 121 Query: 288 FMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 F TAY A+ PGG + + + A + + A Q+LR+F +LL PA ++ Sbjct: 122 FATAYFASMPGGANEMVNLGGRHGAVLQNVAAAQSLRMFVVLLGIPATYAWL 173 >UniRef50_D0RN43 Putative ammonia monooxygenase superfamily protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN43_9RICK Length = 351 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 64/307 (20%), Positives = 127/307 (41%), Gaps = 4/307 (1%) Query: 40 FSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVG 99 S + + FL I+G ++A + ++L + + +A+++ T++ S +V Sbjct: 45 VSFTSYKITFDKKIFLPVLLIIGVILAGSFNITLLYKIHLWIYSSIAMIVCTIIGSIVVA 104 Query: 100 WLLVRYSSLPGNTGAWGSSPGG---AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVL 156 + + PG AA + D + V Q RVLF+ Sbjct: 105 FYFYKVCKFRKLVAVLAGLPGAFVVIAAAINQMTDSKKESGQVVIPQATRVLFIVLILPF 164 Query: 157 VTRMMLGDNAEAVNQHIVWFPP-VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGA 215 V +G + + + + + L+ + +A + L++PS +L M+ Sbjct: 165 VFVTQVGYQEISSHGNNPDYSLRYFLELIFLLGIAQLGSMGLKRLKVPSAPILAAMILCG 224 Query: 216 VLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAG 275 + + ++ T P++ + +A++ +G IG + + LL I A Sbjct: 225 IFYTFEITTARFPDFFINIAFVFLGSAIGCRLSGLPIKEIGFYSLHGFIVSVLLLGIAAI 284 Query: 276 MAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAI 335 A+ L F+ DFM A+L+ +PGGL + VI+ N D + LR+F I+ + P I Sbjct: 285 FAYLLKVFLGFDFMAAFLSFAPGGLHEMVVISIAYNIDPLFVTYHHFLRIFLIIFSIPFI 344 Query: 336 ARFISTY 342 ++ S + Sbjct: 345 LKYFSKH 351 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 1/162 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAILG 62 L+ L ++ L S+G + +P+A +L MI IF + T + P A LG Sbjct: 190 LELIFLLGIAQLGSMGLKRLKVPSAPILAAMILCGIFYTFEITTARFPDFFINIAFVFLG 249 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I L+G + + + ++ L +AI +LL + +PGG Sbjct: 250 SAIGCRLSGLPIKEIGFYSLHGFIVSVLLLGIAAIFAYLLKVFLGFDFMAAFLSFAPGGL 309 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGD 164 MV ++ Y D V + +LR+ + + + + Sbjct: 310 HEMVVISIAYNIDPLFVTYHHFLRIFLIIFSIPFILKYFSKH 351 >UniRef50_D2LU31 Membrane protein AbrB duplication n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LU31_BACS4 Length = 359 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 78/319 (24%), Positives = 133/319 (41%), Gaps = 3/319 (0%) Query: 24 HLPAALLLGPMIAGIIF-SMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWP 82 LP +LG M +++ T+ P + ILG T T+ Sbjct: 27 DLPLPWVLGAMAFIMLWQGFSKRTILWPSPIKNSGLLILGTFFGLYFTNETFITVGPYIL 86 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 + + ++ + S LL ++ + T GS PGG MV ++ A LVA Sbjct: 87 PYILLTIILIFISIFNSALLAKWIKVDRITSILGSIPGGLTEMVTASESLHARPSLVAIF 146 Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLR- 201 Q +R+L V VT + + + + I+L LL V+ G LR Sbjct: 147 QTVRLLTVLFVVPFVTIHLFTASDVESSFALENEGNEMISLSWGYLLYVIPIVAGITLRN 206 Query: 202 -LPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLP 260 +P+G ++ P+ A+L L + LP +L +A + +G IG + L + Sbjct: 207 VMPAGIIIFPLAITALLNISSLELLPLPSIILIIAQIFVGIGIGKNIHFKDLKIGGKYCF 266 Query: 261 QILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAM 320 AL+AI G+ L + TA L+ +PGGL + + AA AD A++ A+ Sbjct: 267 AYFGLALALIAISFGLGVILAALTSLSLSTAMLSIAPGGLIEMVLTAAAIGADPAIVSAL 326 Query: 321 QTLRLFSILLTGPAIARFI 339 Q +R+ I++ P + ++ Sbjct: 327 QFIRILIIIIFVPPLIKWF 345 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 1/163 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQA 59 M L WG L + +++ L +PA +++ P+ + ++ + L LP + AQ Sbjct: 184 MISLSWGYLLYVIPIVAGITLRNVMPAGIIIFPLAITALLNISSLELLPLPSIILIIAQI 243 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +G I +N+ L + L + S +G +L +SL +T +P Sbjct: 244 FVGIGIGKNIHFKDLKIGGKYCFAYFGLALALIAISFGLGVILAALTSLSLSTAMLSIAP 303 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 GG MV A GAD +V+ +Q++R+L + + + Sbjct: 304 GGLIEMVLTAAAIGADPAIVSALQFIRILIIIIFVPPLIKWFF 346 >UniRef50_C3K9K9 Putative transmembrane protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K9K9_PSEFS Length = 350 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 65/339 (19%), Positives = 134/339 (39%), Gaps = 6/339 (1%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 W + ++ L P ++G ++A ++ G + Q I+ I Sbjct: 8 WLVTLIVGALGGSLASWAGWPLPWVIGSLVAVMLTRCAGGRVPEIPHGRHVGQLIVAVAI 67 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 + T ++ +A + +++ +L+TL+ + +L R+ +P T + P ++ M Sbjct: 68 GCHFTLPVMQQVAAHLGLIVTAVLLTLVLALCSVLILHRW-GVPFGTAFFALMPANSSEM 126 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLL 185 V + + AD +A +R+L + V P + L+ Sbjct: 127 VHLGRQRQADTAFIAAAHSIRLLLILLTVPAVATF-----GLPAVAAPAPLPVIWPWLIF 181 Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 + + +A +LP+ P L AV +++ +P WL + IG +G+ Sbjct: 182 ILAMGWLAALGFKQCKLPNPWTFGPFLICAVGVGCNNLSMSIPGWLSGSGQLLIGCALGV 241 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 FD+ RA L ++LL + A + A AW L + + +++ L PG +++ Sbjct: 242 AFDRSFFRRAPGLLAKVLLLLTASVITTALAAWALGAGLGMPWLSLALGMMPGSAPEMSL 301 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 A + L+ AMQ +R+ I + R ++ Sbjct: 302 TAEALGLAVTLVTAMQVIRMLLIQAACLPLYRLLNPEKQ 340 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 69/174 (39%), Gaps = 1/174 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGP-MIAGIIFSMRGITLQLPRSAFLAAQAIL 61 + + L ++GF LP GP +I + +++ +P + Q ++ Sbjct: 176 WPWLIFILAMGWLAALGFKQCKLPNPWTFGPFLICAVGVGCNNLSMSIPGWLSGSGQLLI 235 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 GC + S VL +L +++++A+ W L +P + A G PG Sbjct: 236 GCALGVAFDRSFFRRAPGLLAKVLLLLTASVITTALAAWALGAGLGMPWLSLALGMMPGS 295 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW 175 A M A+ G + LV MQ +R+L + A + + R++ + Sbjct: 296 APEMSLTAEALGLAVTLVTAMQVIRMLLIQAACLPLYRLLNPEKQAQAPVSAKS 349 >UniRef50_A9D2G7 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D2G7_9RHIZ Length = 345 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 134/337 (39%), Gaps = 4/337 (1%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSA-FLAAQA 59 + + +++L ++ F A+ PA L GP + + G+ +Q P A Sbjct: 4 VSWQASVLTIAVAVLGAVLFAALSFPAPYLTGPATMITLAGLAGMKIQSPPLLLRHAVFV 63 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ILG I Q +T +L + + A+ L + LVRY S+ T SSP Sbjct: 64 ILGLTIGQGVTPEVLDAMRTWPVTLTALAASILAIILLTRAALVRYWSMDPTTAFLSSSP 123 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV 179 G + ++ + + AD++ V+ +Q +RVL + + + Sbjct: 124 GHLSYVLGLTEGVKADLKTVSIVQSIRVLALTLLVPAAIAL---TGQLPERPAVGPEETA 180 Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 + L+L IL A + G + L+LP+ ++ ML L ++ + WL A A++++ Sbjct: 181 LVPLVLMILCAALVGYLLHRLKLPAAYLIGGMLVSVGLHVTGIVEGVMSYWLAAAAFVSL 240 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G IG F L + + + A +D + +A +PGG Sbjct: 241 GALIGSRFSGVTLKELRHAFSAGVAVTVLGVVLAGIFAVIAAEITGMDVVAVLIAFAPGG 300 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 L+T+A ++ D + + RL + + P Sbjct: 301 LETMAAMSVILGIDPTFVASHHVARLLILTVIVPFFV 337 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 70/173 (40%) Query: 175 WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 P +LTI +AV+ + L P+ + P + + P L Sbjct: 1 MPPVSWQASVLTIAVAVLGAVLFAALSFPAPYLTGPATMITLAGLAGMKIQSPPLLLRHA 60 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 ++ +G IG G ++L + ++LAI L R+ +D TA+L+ Sbjct: 61 VFVILGLTIGQGVTPEVLDAMRTWPVTLTALAASILAIILLTRAALVRYWSMDPTTAFLS 120 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 +SPG L V + G AD+ + +Q++R+ ++ L PA + + Sbjct: 121 SSPGHLSYVLGLTEGVKADLKTVSIVQSIRVLALTLLVPAAIALTGQLPERPA 173 >UniRef50_C2AL91 Membrane protein AbrB duplication n=7 Tax=Corynebacterineae RepID=C2AL91_TSUPA Length = 363 Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 107/343 (31%), Positives = 165/343 (48%), Gaps = 2/343 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAI 60 +W +LC S L+I + +P+A L ++ I ++ G +PR A AAQ + Sbjct: 7 SARRWALLCASSCALAICLARLGVPSAPLFAALVCAIAIALAGRSPGDIPRPAQYAAQGV 66 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG I + + L WP L I L TLL S G LL + TG+ G Sbjct: 67 LGAYIGTLMQAHTVAALGTRWPAALLIGLATLLLSVAAGALLGLHRDTDSITGSLALVAG 126 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 GA+ +VA+A++ G D VA +QYLRV+ V + +V + + P Sbjct: 127 GASGLVAIARELGGDETTVAVVQYLRVILVTVSLPVVAALYPHVAGASSALTSGPGRPWW 186 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIE-LPEWLLAMAYMAI 239 +L T V +G L LP+G +L P+L A + T +P L+A Y+ I Sbjct: 187 FDLGFTAACVVAGVVLGRLSHLPAGGLLGPLLISATASLTGIATGATVPWILVAAGYLVI 246 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 GW+ G+GF ++ L R LP + + A+ A CA + + L+ + + YLAT+PGG Sbjct: 247 GWQAGVGFTREALRSLARLLPWATILVIAIGAGCAALGFALSAMTGVPLLDGYLATTPGG 306 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 + V +AA SN D+ I+A Q +R+ ++L PA AR + Sbjct: 307 IYAVLAVAASSNVDITFIVAAQLIRVMAMLFLAPAAARGFQRW 349 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 65/178 (36%), Gaps = 2/178 (1%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI--TLQLPRSAFLAAQAI 60 G + + HLPA LLGP++ S+ GI +P A + Sbjct: 186 WFDLGFTAACVVAGVVLGRLSHLPAGGLLGPLLISATASLTGIATGATVPWILVAAGYLV 245 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G T L +LA P +++ A +G+ L + +P G ++PG Sbjct: 246 IGWQAGVGFTREALRSLARLLPWATILVIAIGAGCAALGFALSAMTGVPLLDGYLATTPG 305 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPP 178 G A++A+A DI + Q +RV+ + A R + + Sbjct: 306 GIYAVLAVAASSNVDITFIVAAQLIRVMAMLFLAPAAARGFQRWRGTHRSANAANITV 363 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 53/173 (30%) Query: 176 FPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMA 235 + L + L +PS + ++ + ++P A Sbjct: 4 LSTSARRWALLCASSCALAICLARLGVPSAPLFAALVCAIAIALAGRSPGDIPRPAQYAA 63 Query: 236 YMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLAT 295 +G IG + P LL A L + L D +T LA Sbjct: 64 QGVLGAYIGTLMQAHTVAALGTRWPAALLIGLATLLLSVAAGALLGLHRDTDSITGSLAL 123 Query: 296 SPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 GG + IA D + +Q LR+ + ++ P +A A SA Sbjct: 124 VAGGASGLVAIARELGGDETTVAVVQYLRVILVTVSLPVVAALYPHVAGASSA 176 >UniRef50_A8MLZ6 Conserved hypothetical membrane-spanning protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MLZ6_ALKOO Length = 354 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 66/343 (19%), Positives = 131/343 (38%), Gaps = 10/343 (2%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 + ++ + + + V +PA L++G ++ F++ +P+ L Q + G I Sbjct: 7 LLITILVGSMFGVAAVKVKIPAGLMVGAIVGVAAFNIFFDLAYMPKQTTLVVQIVAGAFI 66 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 ++ S L L +L ++ + G+L+ S L T PGG + Sbjct: 67 GCSMEKSDLRRLPKIIKPAAIMLSSLIILNLTAGFLIYFLSPLDLVTSLMSVVPGGVSDT 126 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG---------DNAEAVNQHIVWF 176 +A GAD VA MQ +R + G + + + + + Sbjct: 127 PIIAAVMGADGPKVAVMQLVRQILGIGVFPALIFVYDHKCRKHGIENERGAFIEKRQKSK 186 Query: 177 PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 L T+++A + G +G + + +GT +L+ +L+ +P+WL A Sbjct: 187 TKSWRAFLCTVVVAALFGILGKISGITAGTFTFAILSVLILKLVFDFAY-IPKWLKKCAQ 245 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 + G +G +L L + + + A C +++ A L T+ Sbjct: 246 VLSGSYLGSTIVLNDVLTLRYLLVPLCIIVLGYAANCFVTGKIISKTCGFTRKEAMLITT 305 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 P G +A+I+ + I+ +Q LR ++ P I I Sbjct: 306 PAGASDMALISNDLGVENTDIIILQVLRAVIVMSLFPQIINLI 348 Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 1/164 (0%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 LL+TIL+ + G +++P+G M+ ++ A + +P+ + + G Sbjct: 7 LLITILVGSMFGVAAVKVKIPAGLMVGAIVGVAAFNIFFDLAY-MPKQTTLVVQIVAGAF 65 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG +K L R + + + + +L+ + + + +D +T+ ++ PGG+ Sbjct: 66 IGCSMEKSDLRRLPKIIKPAAIMLSSLIILNLTAGFLIYFLSPLDLVTSLMSVVPGGVSD 125 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 +IAA AD + MQ +R + PA+ K Sbjct: 126 TPIIAAVMGADGPKVAVMQLVRQILGIGVFPALIFVYDHKCRKH 169 Score = 70.6 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 60/166 (36%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 + V++ L I + A +++ +I + +P+ AQ + Sbjct: 189 SWRAFLCTVVVAALFGILGKISGITAGTFTFAILSVLILKLVFDFAYIPKWLKKCAQVLS 248 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + + + + TL + I+L + + G ++ + ++P G Sbjct: 249 GSYLGSTIVLNDVLTLRYLLVPLCIIVLGYAANCFVTGKIISKTCGFTRKEAMLITTPAG 308 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAE 167 A+ M ++ D G + + +Q LR + V + ++L Sbjct: 309 ASDMALISNDLGVENTDIIILQVLRAVIVMSLFPQIINLILHIIGA 354 >UniRef50_Q1YFT4 Possible ammonia monooxygenase n=2 Tax=Aurantimonadaceae RepID=Q1YFT4_MOBAS Length = 366 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 79/316 (25%), Positives = 130/316 (41%), Gaps = 2/316 (0%) Query: 26 PAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVL 85 P A LLGP++ S+ G+ +LP+ A ILG +T ++L +A+ Sbjct: 32 PVAWLLGPVLVVSAASIAGLDTRLPQGLRTLAFFILGVQAGSGVTPAVLDQMAIWPLSFT 91 Query: 86 AILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYL 145 +L L+ + L +T + S PG + ++A A + AD+ V +Q + Sbjct: 92 VQMLGILVVIIVTRAFLRYGLGWDRDTALFASLPGALSFVLAAASETRADLPRVTIVQSV 151 Query: 146 RVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSG 205 R+L + GA V G P LL + + V A +G L+RLP G Sbjct: 152 RLLILIGALTPVLGWFEGGEDVVAASRGTDGP--LTEYLLLLFVCVAAAALGHLVRLPGG 209 Query: 206 TMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLS 265 ML ++ A + G+ T+ +P L + + +G IG LP + S Sbjct: 210 MMLGALIGSAFMHVGEFATVAIPPALAVPSLILLGALIGSRLQGLDRKGVFALLPAAIGS 269 Query: 266 IFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRL 325 + I A + I LA +PG L+ + V+A + D A + A +R Sbjct: 270 FAIGIVISAISVAVAVLVLEISVGKVALAYAPGALEALTVLAFQFDVDPAYVAAHHVVRF 329 Query: 326 FSILLTGPAIARFIST 341 I L P +A+ I+ Sbjct: 330 ICIALMVPLLAKHIAR 345 Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 66/175 (37%), Gaps = 1/175 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAI 60 P+ ++ +L + + + V LP ++LG +I + T+ +P + + + + Sbjct: 183 PLTEYLLLLFVCVAAAALGHLVRLPGGMMLGALIGSAFMHVGEFATVAIPPALAVPSLIL 242 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG +I L G + P + + ++ SAI + V + A +PG Sbjct: 243 LGALIGSRLQGLDRKGVFALLPAAIGSFAIGIVISAISVAVAVLVLEISVGKVALAYAPG 302 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW 175 A+ +A + D VA +R + +A L+ + + Sbjct: 303 ALEALTVLAFQFDVDPAYVAAHHVVRFICIALMVPLLAKHIARPGDTVAVPPEES 357 Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 1/158 (0%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 NL+ T+ LA + G L LP +L P+L + L T LP+ L +A+ +G Sbjct: 11 NLVATLALAALGGAGAAALGLPVAWLLGPVLVVSAASIAGLDT-RLPQGLRTLAFFILGV 69 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 + G G +L + + + +L + L + D TA A+ PG L Sbjct: 70 QAGSGVTPAVLDQMAIWPLSFTVQMLGILVVIIVTRAFLRYGLGWDRDTALFASLPGALS 129 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 V A+ + AD+ + +Q++RL ++ + + Sbjct: 130 FVLAAASETRADLPRVTIVQSVRLLILIGALTPVLGWF 167 >UniRef50_A8TSC8 Putative ammonia monooxygenase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSC8_9PROT Length = 361 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 73/328 (22%), Positives = 141/328 (42%), Gaps = 2/328 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 V+ W L +H+P A LLG + A + G+ L +P Q +L Sbjct: 9 TVILWAATLTLGAAGGFALDLLHVPLAWLLGSLGAVAAAGLCGVGLSVPPGGRQVGQLLL 68 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G I T ++ +A +++ L+++ + + L R + + T + S PGG Sbjct: 69 GTAIGLTFTSAVAEAVAGYASVMVLAALLSITYGVVAAYTLRRSAKVDDATAFFASVPGG 128 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A M +A+ G + V+ Q LR+L V V ++ + + F P + Sbjct: 129 VAEMSILAERNGGETAPVSLAQSLRILCVVITIPPVITVLGLTGIDPFEPSTLSFDP--M 186 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 + LA+ G + ++P+ +L PM ++ + + +P LL ++ + IG Sbjct: 187 GFGALLTLALAGGGLLAWRKVPNAWLLGPMAVAVLVTATESHLSSMPTPLLNLSQVLIGA 246 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +GL + + LL R LP +LS L+ + + + + T LA SPGG+ Sbjct: 247 TLGLRYRRDRLLALRRFLPSAILSTVVLVGLNVATGAVIGLAVGLPVATMALALSPGGMA 306 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSIL 329 +++ A + + ++ A +R+F ++ Sbjct: 307 EMSITAKVLHLGVPIVSAFHVVRIFLVI 334 Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 1/168 (0%) Query: 172 HIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 P I T+ L G LL +P +L + A A + + +P Sbjct: 2 PSRLQAPTVILWAATLTLGAAGGFALDLLHVPLAWLLGSLGAVAAAGLCG-VGLSVPPGG 60 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 + + +G IGL F + ++L+ + A+ L R +D TA Sbjct: 61 RQVGQLLLGTAIGLTFTSAVAEAVAGYASVMVLAALLSITYGVVAAYTLRRSAKVDDATA 120 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + A+ PGG+ ++++A + + A + Q+LR+ +++T P + + Sbjct: 121 FFASVPGGVAEMSILAERNGGETAPVSLAQSLRILCVVITIPPVITVL 168 >UniRef50_B9Y4Q0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4Q0_9FIRM Length = 352 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 68/345 (19%), Positives = 135/345 (39%), Gaps = 13/345 (3%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 + W + + + LPA +LG M+A + ++ LP + + AQAI G Sbjct: 1 MNWVLTLLAGVAGWQLAARWKLPAPAMLGSMLAVGLTNILFDYAALPMAVKVFAQAISGA 60 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 I + + + L + ++ +++ +VG + + T GG Sbjct: 61 FIGMQIGRKDVARMRGLIVPFLLLAVMLTVNTFVVGIAIQKLCGWDWITALLSCVAGGVT 120 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVN------------Q 171 + +A + AD+ VA MQ R++ V + + + Sbjct: 121 DISLIAMEMDADVGTVAMMQTARLVGVLLFFPYWIQFVTRHEPKTAPVTEEKPLDAAHTP 180 Query: 172 HIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 S ++ T+LL++ G +G LP+ +M+ PM+A A L + +P + Sbjct: 181 LDRLISTRSSRIVFTLLLSIGLGYLGNASGLPAASMVFPMIAVAALNCTTSV-CAVPLAI 239 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 +A + G +G+ L + L + + + + R +D +A Sbjct: 240 KNIAQLLAGSLVGVSITAATFSSLSSTLVPVGLLLLSYWTVNGLYSGICKRTKLLDLKSA 299 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 A++PGG +++IAA AD++ I +Q LR ++ P + Sbjct: 300 MFASAPGGATDMSLIAADLGADLSQIALIQVLRAAYVVAVMPPLI 344 Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 1/165 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 +N +LT+L V + +LP+ ML MLA + LP + A G Sbjct: 1 MNWVLTLLAGVAGWQLAARWKLPAPAMLGSMLAVGLTNILFDY-AALPMAVKVFAQAISG 59 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 IG+ ++ + R + LL L + + + D++TA L+ GG+ Sbjct: 60 AFIGMQIGRKDVARMRGLIVPFLLLAVMLTVNTFVVGIAIQKLCGWDWITALLSCVAGGV 119 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 +++IA +AD+ + MQT RL +LL P +F++ + PK Sbjct: 120 TDISLIAMEMDADVGTVAMMQTARLVGVLLFFPYWIQFVTRHEPK 164 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 70/162 (43%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 + +LS+ L A LPAA ++ PMIA + +P + AQ + G + Sbjct: 191 RIVFTLLLSIGLGYLGNASGLPAASMVFPMIAVAALNCTTSVCAVPLAIKNIAQLLAGSL 250 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + ++T + ++L+ V +LL + + + R L + + S+PGGA Sbjct: 251 VGVSITAATFSSLSSTLVPVGLLLLSYWTVNGLYSGICKRTKLLDLKSAMFASAPGGATD 310 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNA 166 M +A D GAD+ +A +Q LR +V + + Sbjct: 311 MSLIAADLGADLSQIALIQVLRAAYVVAVMPPLILGFIQWIG 352 >UniRef50_C2LN52 Membrane-associated ammonia monooxygenase n=8 Tax=Enterobacteriaceae RepID=C2LN52_PROMI Length = 346 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 67/346 (19%), Positives = 130/346 (37%), Gaps = 3/346 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI 60 M L+ + L+ LP AL+ GP++ II L +P+ Q Sbjct: 1 MSFLKKLPGILFCALIGGLLTLSGLPMALMFGPIVVVIIAYRFKWQLSVPKHTLTFIQLT 60 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG + L + +++ +++ + + R+ G+ PG Sbjct: 61 LGTSVGLMFNQVHLGSADNLVLLLIILVICLAIQFVVSFLWFHRHIGWTKEEAMLGAVPG 120 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 AA++A+ + + +R++ + A + E + + Sbjct: 121 AMAAILALTDHTKTPPQKIVISHTIRLIVLIIMAGFIVGSDKATLTEFTLPEMTLLSSMW 180 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 LLL + L +V+G + + P+ ML + + ++QS I P L ++ + IG Sbjct: 181 --LLLIVALGLVSGLLLQKIHFPAPFMLTSLGSAILVQSFVSEPIAFPMLLNELSMVLIG 238 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 IG F ++ + + + + +A + T LA +PG + Sbjct: 239 MNIGAHFVVFPFASLIKNAFSSVQVVIINVILTVIVALSAAYLTGAPWTTLVLAWAPGSM 298 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + + A N D A +M+ LR+ I+ + P+IA F S KR Sbjct: 299 EAMTFAAITMNVDAAFVMSNHILRML-IIQSIPSIALFYSERKQKR 343 >UniRef50_C4XND2 Hypothetical membrane protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XND2_DESMR Length = 366 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 162/345 (46%), Positives = 225/345 (65%), Gaps = 3/345 (0%) Query: 5 QWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCM 64 QW L L++LL+ GF A+ LPAALLLGPM+AGI ++ G +++LP + F+ AQA++GC+ Sbjct: 6 QWLGLLALTVLLAAGFSALELPAALLLGPMVAGIAVALGGASIRLPDTPFVLAQAVVGCL 65 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 IA+ + ++L +W + ++L +++SA +G +L R +PG T WG+SPGGAAA Sbjct: 66 IARAASPAVLPEFLSHWHLFSLVILAGIVASAAMGLVLCRLRVMPGTTAIWGASPGGAAA 125 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 MV MA GAD RLVAFMQYLRVL VA AA +V R + +Q VW PP++ L Sbjct: 126 MVVMADACGADARLVAFMQYLRVLCVALAATVVAR--AAGGSAPPHQATVWLPPLTAGLA 183 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 + L + G RL G ML+PM GA L+ L+ I+LP WLLA AY AIGWR+G Sbjct: 184 PALGLIGLGALAGLCTRLSGGAMLVPMFLGAALRLTGLVEIDLPPWLLAAAYAAIGWRVG 243 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 LGF +++ L A R +P IL+ I AL+A C G++W L + +D +TAYLA SPGG+D+VA Sbjct: 244 LGFTQKVALYAARAVPAILVGILALIAFCGGLSWLLAKTTGMDPLTAYLAASPGGMDSVA 303 Query: 305 VIAAGS-NADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 VIAA S D A++M MQT+R F ++L P +ARF++ A R Sbjct: 304 VIAASSPGVDFAVVMTMQTMRFFLVVLLAPPMARFLAGRAEARGG 348 >UniRef50_A3VX57 Putative uncharacterized protein n=4 Tax=Rhodobacteraceae RepID=A3VX57_9RHOB Length = 350 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 132/309 (42%), Gaps = 1/309 (0%) Query: 31 LGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLV 90 + +IA + + P+ L AI+G MI +T ++ T A+ L Sbjct: 37 ISALIATALPERLPTGYRFPQKLRLMFIAIIGLMIGAQVTPALFTEAHHYALTFGAVTLF 96 Query: 91 TLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFV 150 L+ A+ + T + S+PGG + + + GAD+ + Q+LR++ V Sbjct: 97 VGLAHAMGYTIFRHLGGYDPTTAFYASTPGGLYESIELGEAAGADVTRLMMQQFLRIIVV 156 Query: 151 AGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI-NLLLTILLAVVAGTVGCLLRLPSGTMLI 209 A L + LG + + P V +L L +L + +G LLRLP+G M Sbjct: 157 VTALPLGLSLWLGAPVGSSAGMTMARPDVPWSDLPLIVLAGLGGLGLGHLLRLPAGQMTG 216 Query: 210 PMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFAL 269 PM A L ++ ++P+WL+ MA + +G +G+ F LR L ++ A+ Sbjct: 217 PMALAAALSLSGWLSFDIPQWLVNMAQIVLGTALGMRFTGLSRSLLLRGAALALAAVGAM 276 Query: 270 LAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSIL 329 L + G+A L + +PGG+ +A++A A+ A + R+ + Sbjct: 277 LTLGVGLALALHEMTGEAVDVLLITLAPGGVTEMALVALSLQANPAFVTIHHIYRIVLTV 336 Query: 330 LTGPAIARF 338 LT I R Sbjct: 337 LTLGVITRL 345 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 1/161 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQA 59 +P ++ + L + LPA + GPM S+ G ++ +P+ AQ Sbjct: 185 VPWSDLPLIVLAGLGGLGLGHLLRLPAGQMTGPMALAAALSLSGWLSFDIPQWLVNMAQI 244 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +LG + TG + L + LA + L + L + + +P Sbjct: 245 VLGTALGMRFTGLSRSLLLRGAALALAAVGAMLTLGVGLALALHEMTGEAVDVLLITLAP 304 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRM 160 GG M +A A+ V R++ ++TR+ Sbjct: 305 GGVTEMALVALSLQANPAFVTIHHIYRIVLTVLTLGVITRL 345 Score = 50.6 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 41/137 (29%) Query: 212 LAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLA 271 L L P+ L M IG IG + A + Sbjct: 40 LIATALPERLPTGYRFPQKLRLMFIAIIGLMIGAQVTPALFTEAHHYALTFGAVTLFVGL 99 Query: 272 ICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLT 331 A D TA+ A++PGGL + + AD+ +M Q LR+ ++ Sbjct: 100 AHAMGYTIFRHLGGYDPTTAFYASTPGGLYESIELGEAAGADVTRLMMQQFLRIIVVVTA 159 Query: 332 GPAIARFISTYAPKRSA 348 P SA Sbjct: 160 LPLGLSLWLGAPVGSSA 176 >UniRef50_C0VV00 Ammonia monooxygenase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VV00_9CORY Length = 354 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 92/345 (26%), Positives = 165/345 (47%), Gaps = 5/345 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILG 62 ++W ++ LS+LL +PAA ++GP++ ++ L L R F ++ +G Sbjct: 8 VRWLVVAPLSVLLGYVLSRASVPAAWIIGPLVVSAACALLTKKELPLNRYLFRFSRGTIG 67 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVR-YSSLPGNTGAWGSSPGG 121 + A L L T+L + I G ++ + + + +G GG Sbjct: 68 ILAALPLVTVGWREFVTYLLPGLFTATFTILLAIIGGTIMGKTHKQIGLESGIMSMLAGG 127 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+ M +A++ GAD R VA QYLR+L V+ + LV ++ + P + Sbjct: 128 ASVMPIIAKEVGADYRYVALNQYLRLLTVSVSLPLVAGWLMTTESAPAGHPAPPEPAGWV 187 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQL--ITIELPEWLLAMAYMAI 239 L + I +A+ A +V L +PS +++ P+L ++ S +++ PE + +A++ + Sbjct: 188 GLAIIIAVAMGAESVARFLHIPSPSIIGPILVMIIVASAIPDSVSLYPPEVMRIIAFLVV 247 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 GW G L LP L + L+ CA +AW LT ++ I + AYLAT+PG Sbjct: 248 GWMCGGSLSLTSLKTFSALLPITLTFVGVLIGACALIAWPLTEWLDITYFEAYLATTPGA 307 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 LDTV + + S + A+++ MQ +RL I++ + +F+ Y Sbjct: 308 LDTVLALTSESGSG-AVVVTMQVIRLLCIVVFAGYLPQFLRLYRR 351 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 75/162 (46%), Gaps = 4/162 (2%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR---GITLQLPRSAFLAAQA 59 + ++ +++ +H+P+ ++GP++ II + ++L P + A Sbjct: 186 WVGLAIIIAVAMGAESVARFLHIPSPSIIGPILVMIIVASAIPDSVSLYPPEVMRIIAFL 245 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ++G M +L+ + L T + PI L + V + + A++ W L + + ++P Sbjct: 246 VVGWMCGGSLSLTSLKTFSALLPITLTFVGVLIGACALIAWPLTEWLDITYFEAYLATTP 305 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 G ++A+ + G+ +V MQ +R+L + A + + + Sbjct: 306 GALDTVLALTSESGS-GAVVVTMQVIRLLCIVVFAGYLPQFL 346 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 63/176 (35%), Gaps = 1/176 (0%) Query: 174 VWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLA 233 + + L+ L+V+ G V +P+ ++ P++ A + L +L Sbjct: 1 MATTLWHVRWLVVAPLSVLLGYVLSRASVPAAWIIGPLVVSAACALLTKKELPLNRYLFR 60 Query: 234 MAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMH-IDFMTAY 292 + IG L + L L + + + + + I + Sbjct: 61 FSRGTIGILAALPLVTVGWREFVTYLLPGLFTATFTILLAIIGGTIMGKTHKQIGLESGI 120 Query: 293 LATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 ++ GG + +IA AD + Q LRL ++ ++ P +A ++ T + Sbjct: 121 MSMLAGGASVMPIIAKEVGADYRYVALNQYLRLLTVSVSLPLVAGWLMTTESAPAG 176 >UniRef50_D0L4U6 Membrane protein AbrB duplication n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L4U6_GORB4 Length = 375 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 104/360 (28%), Positives = 168/360 (46%), Gaps = 14/360 (3%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ------------ 48 +PV +W +L +L+ + + + AA L ++ + ++ GI+ + Sbjct: 10 VPVRRWILLALLTGAATYLLELLDVDAAPLFAGLVIAGVLAIAGISPRPPGAISDDPDAP 69 Query: 49 -LPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSS 107 +PR LAAQ +LG I L+ L W VL I + TL S G LL + Sbjct: 70 VIPRGYVLAAQGVLGVYIGTIADSDTLSGLGSAWFPVLVIGVATLGLSVAGGALLGLHKQ 129 Query: 108 LPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAE 167 + TG+ GGA+ +V + ++ G D R+VA +QYLRV V + L ++ G ++ Sbjct: 130 VDPLTGSLALVAGGASGLVVVTRELGGDERMVAVIQYLRVALVTLSIPLFASLVFGQSSA 189 Query: 168 AVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT-IE 226 AV + + L+L + V VG LL +P+G +L+PM V + + E Sbjct: 190 AVTETTPSWADQGWGLVLMAVCMGVGIPVGRLLHVPAGALLVPMALATVAELTGIAGDAE 249 Query: 227 LPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHI 286 + LL + Y IGW+ GLGF L R LP L+ I A+ CA + L+ + Sbjct: 250 VSPILLTLGYAVIGWQAGLGFTLPRLRAIGRVLPFALVLILAIGVGCALLGVALSAWTGE 309 Query: 287 DFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 YLAT+PGG+ V A + ++A ++A Q LR+ +L P AR + + + Sbjct: 310 SMYDCYLATTPGGIYAVLAAATAAGGNVAFVVAAQILRVLLMLFVAPFAARVAARHLRRP 369 >UniRef50_B6R4M6 Putative ammonia monooxygenase superfamily protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R4M6_9RHOB Length = 367 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 66/331 (19%), Positives = 126/331 (38%), Gaps = 7/331 (2%) Query: 25 LPAALLLGPMIAGIIFSMRGITL------QLPRSAFLAAQAILGCMIAQNLTGSILTTLA 78 LPA L GPM+ ++ + L P +G + ++ A Sbjct: 28 LPAGFLAGPMVTVVLAKSISLPLLKDNSFTFPSGLISTNLIFIGAAMGSAVSPDFWAGAA 87 Query: 79 VNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRL 138 + +LA++ V ++ V + + + PG A+AQ+ GA + Sbjct: 88 LWPLSMLALVAVVSGITSCVYLYTYKKCRWGRDEAFFAGLPGALGMTAALAQERGAPMDR 147 Query: 139 VAFMQYLRVLFVAGAAVLVTR-MMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVG 197 + +Q +R+ + L+ ++ G + + L+L +L+ V G Sbjct: 148 IMIVQLVRLFLLIAVLPLIISSVVGGKEVIFTEANDAMSLRDGLYLVLAVLICAVCGYAA 207 Query: 198 CLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALR 257 L+ P+G + A A L S ++ LP WL Y+ +G +GL K Sbjct: 208 LKLKAPAGMLTGAFFASAALNSTGMLEFALPVWLATPCYILMGTNVGLYIGKMDRNTLKP 267 Query: 258 PLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALI 317 L L+ L++ G A + + I F +L+ +PGG++ + +I+ + D + Sbjct: 268 MLGTSLVVFAISLSVALGGAVVTSWALEISFDKVFLSFAPGGMEAMLLISILLDIDPVFV 327 Query: 318 MAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 Q R +L P + R++ A Sbjct: 328 ATHQLARFMGLLAFMPIVTRYVLGPVSAGQA 358 >UniRef50_A7IC16 Putative ammonia monooxygenase n=2 Tax=Xanthobacteraceae RepID=A7IC16_XANP2 Length = 367 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 74/333 (22%), Positives = 124/333 (37%), Gaps = 3/333 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 + L F A+ LPAA + G ++ I ++ G+ + +P A +LG + Sbjct: 15 AITLGAGALGGGVFAALGLPAAWISGALVVSIALAVAGVRIAVPEWIRFLAFIVLGTSMG 74 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 LT A + + L + A L R + T W S+PG +V Sbjct: 75 TALTPETFARAATWPISMACLGASVLATMAGGALFLNRVAGWSRETAFWASAPGAFGTVV 134 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLT 186 AMA D AD+R VAF Q LR+ + A V V + + + Sbjct: 135 AMAADTSADLRKVAFAQALRLFLLVAALPNVLGATGLTAGGLPPPPHVSTA---LEVAIL 191 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 + + V G L++P G +L + A L + L + LP+ + A++ +G +G+ Sbjct: 192 LGVCVTTGLGAAWLKVPGGLILGALAGSAALHATSLSSAVLPQAFIVPAFVVLGASVGVR 251 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 F L L + ++I A D A +PG L+ + + Sbjct: 252 FLGTTLGTIRAYFFASLGAFLVAVSISTLFALLAAWLTGDDLGKLVTAFAPGALEAMTAL 311 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 D A + A R + + P AR + Sbjct: 312 GFALGYDPAFMSAHHLFRFAGLSVALPVAARLL 344 Score = 61.4 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 1/165 (0%) Query: 172 HIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 + ++ +T+ + G V L LP+ + ++ L + I +PEW+ Sbjct: 3 PLASHLRSAVAAAITLGAGALGGGVFAALGLPAAWISGALVVSIALAVAG-VRIAVPEWI 61 Query: 232 LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 +A++ +G +G + RA + ++LA AG A L R TA Sbjct: 62 RFLAFIVLGTSMGTALTPETFARAATWPISMACLGASVLATMAGGALFLNRVAGWSRETA 121 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 + A++PG TV +AA ++AD+ + Q LRLF ++ P + Sbjct: 122 FWASAPGAFGTVVAMAADTSADLRKVAFAQALRLFLLVAALPNVL 166 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 1/164 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIA-GIIFSMRGITLQLPRSAFLAAQAI 60 L+ +L + + +G + +P L+LG + + + + LP++ + A + Sbjct: 184 TALEVAILLGVCVTTGLGAAWLKVPGGLILGALAGSAALHATSLSSAVLPQAFIVPAFVV 243 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG + G+ L T+ + L LV + S + L + +PG Sbjct: 244 LGASVGVRFLGTTLGTIRAYFFASLGAFLVAVSISTLFALLAAWLTGDDLGKLVTAFAPG 303 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGD 164 AM A+ G D ++ R ++ A + R++ Sbjct: 304 ALEAMTALGFALGYDPAFMSAHHLFRFAGLSVALPVAARLLFAA 347 >UniRef50_B5JBC7 Putative ammonia monooxygenase superfamily n=2 Tax=Octadecabacter antarcticus RepID=B5JBC7_9RHOB Length = 336 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 70/336 (20%), Positives = 137/336 (40%), Gaps = 1/336 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 + M ++S L F+A+ LP LLGP++ +I ++ G+ LQ + + ILG Sbjct: 1 MALLMTLLISGLGVAAFMALGLPLPWLLGPLLGCLIAALFGVRLQGAPKSSQVMRTILGV 60 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + +T ++ + + + + + A+ L + T + S PGG Sbjct: 61 AVGATITPALFAQMGTLIWTLALMPPLVICVGAVGYPLFRKGFGFDHPTAFYASMPGGLQ 120 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 M+ ++ G D+R ++ + RVL V + + + + L Sbjct: 121 DMLLFGEEAGGDVRALSLIHATRVLIVVMVLPFMFAYLYDVDMNQPVGE-PFLSVPWTQL 179 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 L+ ++ + L L ++L P+ A L I P + A IG+ I Sbjct: 180 LILAAAGIIGWRIAAALGLFGASLLGPLFFTAALSLVGFIQHRPPAEAIQAAQFFIGFTI 239 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G+ + + ++ L I A A + R + F + LA SPGG + Sbjct: 240 GVKYAGISWRELRVDVTAGVVFSVLSLCISAVFAAVVIRLGWLPFTESVLAFSPGGQAEM 299 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 A++A + AD A+++A +R+ +++ P + R+ Sbjct: 300 AIVALVAGADAAVVVAHHLVRIVFVIIGAPLVNRWF 335 Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 1/163 (0%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQA 59 +P Q +L ++ A+ L A LLGP+ S+ G + P A AAQ Sbjct: 174 VPWTQLLILAAAGIIGWRIAAALGLFGASLLGPLFFTAALSLVGFIQHRPPAEAIQAAQF 233 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 +G I G L V+ + +++L SA+ +++R LP SP Sbjct: 234 FIGFTIGVKYAGISWRELRVDVTAGVVFSVLSLCISAVFAAVVIRLGWLPFTESVLAFSP 293 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162 GG A M +A GAD +V +R++FV A LV R Sbjct: 294 GGQAEMAIVALVAGADAAVVVAHHLVRIVFVIIGAPLVNRWFG 336 >UniRef50_B9E738 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E738_MACCJ Length = 296 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 4/248 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILG 62 L + ++ + SLL + AVH+ L GP+IA ++ + P+ ILG Sbjct: 11 LNYIIIFIASLLTGLILSAVHVILPWLFGPIIATVLLKKFTSREYRWPKWLSEIGLYILG 70 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I + T I+ + ++ I + +L + ++ ++L R+ + T S PG Sbjct: 71 AQIGASFTKEIVADIQDELLYIILISIFVILLAIMISFVLKRFLNCSLETAILASIPGAL 130 Query: 123 AAMVAMAQD-YGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS- 180 M+ MA++ A++ +V Q R+L V ++ ++ A Sbjct: 131 NQMIVMAEENKNANLLVVTLAQTSRILIVVLTVPFISSLLPEGVHRATISQTPSMVEALN 190 Query: 181 -INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 +LL I V+AG + + P M+ P+ + I +P L+ +A M Sbjct: 191 MQTILLLIGAMVIAGYLYRRIHFPVPDMMGPITVLMIWNLTTGINFMIPTPLIILAQMFF 250 Query: 240 GWRIGLGF 247 G RIGL Sbjct: 251 GIRIGLQL 258 Score = 94.1 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 82/164 (50%), Gaps = 1/164 (0%) Query: 177 PPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 S+N ++ + +++ G + + + + P++A +L+ P+WL + Sbjct: 7 AGDSLNYIIIFIASLLTGLILSAVHVILPWLFGPIIATVLLKKFTSREYRWPKWLSEIGL 66 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 +G +IG F K+I+ L I+L ++ + +++ L RF++ TA LA+ Sbjct: 67 YILGAQIGASFTKEIVADIQDELLYIILISIFVILLAIMISFVLKRFLNCSLETAILASI 126 Query: 297 PGGLDTVAVIAAG-SNADMALIMAMQTLRLFSILLTGPAIARFI 339 PG L+ + V+A NA++ ++ QT R+ ++LT P I+ + Sbjct: 127 PGALNQMIVMAEENKNANLLVVTLAQTSRILIVVLTVPFISSLL 170 >UniRef50_A1AYU4 Putative ammonia monooxygenase n=5 Tax=Rhodobacteraceae RepID=A1AYU4_PARDP Length = 343 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 59/288 (20%), Positives = 115/288 (39%), Gaps = 1/288 (0%) Query: 56 AAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAW 115 + ILG + ++T +L L +L + + + + L R T + Sbjct: 57 FMRTILGVAVGASITPGVLAELPDVAASLLFVPGFIGVIALVGYPLFRRVFGFDHATAWY 116 Query: 116 GSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVW 175 G+ PGG M+ ++ G DIR ++ + RVL + A L+ G + + Sbjct: 117 GAMPGGLQDMLVFGEEAGGDIRALSLIHATRVLVIVTVAPLIMTAWWGVDL-SQPPGTPM 175 Query: 176 FPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMA 235 + + L + ++ L + ++L PM+ A L LIT P ++ A Sbjct: 176 RATGAAEIALMVAAGLIGWKGAERLGIFGASILGPMVLTAALSLSGLITQRPPAEMIQAA 235 Query: 236 YMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLAT 295 IG +G+ + L + ++ L I + + A+LA Sbjct: 236 QFFIGIAVGVKYAGITLRELRLHVTAGIVYALLLAWISLIFIEVIVHLRLAPGLDAFLAF 295 Query: 296 SPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 PGG + VIA + AD+A +++ LR+ +++ GP + + + + Sbjct: 296 LPGGQAEMVVIALIAGADLAYVVSHHLLRMIIVIVLGPVVGKVLGRRS 343 >UniRef50_Q0S615 Possible ammonia monooxygenase n=2 Tax=Rhodococcus RepID=Q0S615_RHOSR Length = 369 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 103/347 (29%), Positives = 161/347 (46%), Gaps = 4/347 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILG 62 L+W L LS+ + +V L AA L +I ++ G ++PR AQ +L Sbjct: 20 LRWAALIALSVGGWVLGESVGLTAAGLFSALIVAATLAVTGWGPARVPRPLGKLAQGVLA 79 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + + + L W V++I TL S G LL + + TG+ + GGA Sbjct: 80 SAVGLMVHRDTIAGLGSMWMPVVSIAAATLALSVAAGALLALHRDVDAVTGSLAMTAGGA 139 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG--DNAEAVNQHIVWFPPVS 180 +VAMA++ G D R+VA +QYLRV V + ++ AE V Sbjct: 140 TGLVAMARELGGDDRVVAVVQYLRVALVVVSMPMIVTFGFRADTGAETVTGTEGGGSEWY 199 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITI-ELPEWLLAMAYMAI 239 + L L V V L+RLP+ L P+ A + G +P L+ A + I Sbjct: 200 VALPFLALFIVGGTAVASLVRLPAPATLGPLAVSAGFELGGWSDAVAVPPMLMTGALILI 259 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 GW+ GL FD+ L R LP L + A CAG+ L+ + + AYLAT+PGG Sbjct: 260 GWQAGLAFDRASLRAIGRILPYAALLTLLVGAACAGLGVLLSHLTGVSLLEAYLATTPGG 319 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 L V ++A + +++ + A Q LRL +L+T P +A+ + ++ +R Sbjct: 320 LAAVLAVSASTASNVTFVAAAQVLRLVIMLVTTPIMAKAFAHFSSRR 366 Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 62/174 (35%) Query: 165 NAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT 224 +V + I L+V +G + L + + ++ A L Sbjct: 4 PERSVPTRAAALRRHGLRWAALIALSVGGWVLGESVGLTAAGLFSALIVAATLAVTGWGP 63 Query: 225 IELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFM 284 +P L +A + +GL + + ++ A LA+ L Sbjct: 64 ARVPRPLGKLAQGVLASAVGLMVHRDTIAGLGSMWMPVVSIAAATLALSVAAGALLALHR 123 Query: 285 HIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARF 338 +D +T LA + GG + +A D ++ +Q LR+ ++++ P I F Sbjct: 124 DVDAVTGSLAMTAGGATGLVAMARELGGDDRVVAVVQYLRVALVVVSMPMIVTF 177 >UniRef50_C0XTR9 Ammonia monooxygenase n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XTR9_9CORY Length = 355 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 93/341 (27%), Positives = 155/341 (45%), Gaps = 7/341 (2%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAI 60 L+W ++ S+ L + +P A +LG ++A ++ G L + AA+ I Sbjct: 9 TWLRWLIVAPASVALGFVLSRLGVPVAWILGAILASGAMALASGRDLPVDPRILSAARGI 68 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G + A +L L + + +VT+ + G L ++ + TG G Sbjct: 69 IGVIAALSLANVPPRELLGYLAPGVMVAVVTVGLAFAGGLFLAKH-GVSRETGILSLLAG 127 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS 180 GA+ M A+A+D G D R VA QYLR+L V+ LV + Sbjct: 128 GASMMPAIAEDVGGDPRYVALSQYLRLLAVSVTLPLVAAFLTAPGGTGHAPE----ASAW 183 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 LL L V +G LL +P+ + P+ AV+ S + P + +A++AIG Sbjct: 184 WVWLLIPALVAVGQPLGTLLHMPNSKVFGPLTLTAVVASLIDAPLTPPPAITIVAFLAIG 243 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 W G G + L R LP + I AL+ CA + W ++ ++ I + YLATSPG + Sbjct: 244 WLCGGGLNVAALRLFARLLPVTVTYIVALMGACAAVGWVVSAWLDITYYEGYLATSPGAI 303 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 +TV ++A A A ++A+Q +RL +LL + + + Sbjct: 304 ETVLALSAEGGAGPA-VIAIQLIRLCGVLLFAAYLPKLLKR 343 Score = 64.1 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 1/171 (0%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 + L+ +V G V L +P +L +LA + + + +L+ A Sbjct: 8 HTWLRWLIVAPASVALGFVLSRLGVPVAWILGAILASGAMALASGRDLPVDPRILSAARG 67 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 IG L L L ++ + + L + + T L+ Sbjct: 68 IIGVIAALSLANVPPRELLGYLAPGVMVAVVTVGLAFAGGLFLAK-HGVSRETGILSLLA 126 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 GG + IA D + Q LRL ++ +T P +A F++ A Sbjct: 127 GGASMMPAIAEDVGGDPRYVALSQYLRLLAVSVTLPLVAAFLTAPGGTGHA 177 >UniRef50_B8FR89 Membrane protein AbrB duplication n=4 Tax=Desulfitobacterium hafniense RepID=B8FR89_DESHD Length = 368 Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 140/344 (40%), Gaps = 29/344 (8%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAIL 61 +L G++ L++ F ++ PA ++GPM+ I+ + G L L + Q ++ Sbjct: 4 LLDLGLMIGLAVAGYGLFRKINFPAPSIMGPMMILGIYQVLGGGLPELSLTIVNILQIVI 63 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G + + L L L I + TLLS+ + +++ +++ T + ++PGG Sbjct: 64 GLSLGARINDQKLADLGKVLRPSLVIAVWTLLSTFGMTFIIHQFTP-NMATALFAAAPGG 122 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG------------------ 163 + M +A Y A + +V+ Q++R++ + L+ R + G Sbjct: 123 ISEMTVLALVYDAAVPIVSTYQFVRLVVIISVVPLIARWLQGRQKSKDLAVDQEPAGAVL 182 Query: 164 ---------DNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAG 214 Q + +L L+ + G + L P G ++ M A Sbjct: 183 GGADLEDSQGPESKTAQEQPVSALTTWQILPLYLIGTLGGLLLLALNFPGGGVIGAMAAL 242 Query: 215 AVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICA 274 A+ + P ++ +A + IG IGL F +I+ L I+ ++ Sbjct: 243 AITNVLFKKQYKFPNSVMQIALLGIGMSIGLEFSPEIVRTIREMLLPIVGFSLLIVLSNL 302 Query: 275 GMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIM 318 + W + H D +T L+++PGGL+ + V+A AD I Sbjct: 303 AVGWYIRHLTHWDMITCLLSSAPGGLNQMLVVAEEMKADSLTIS 346 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 1/169 (0%) Query: 179 VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMA 238 ++L L I LAV + + P+ +++ PM+ + Q EL ++ + + Sbjct: 3 FLLDLGLMIGLAVAGYGLFRKINFPAPSIMGPMMILGIYQVLGGGLPELSLTIVNILQIV 62 Query: 239 IGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPG 298 IG +G + Q L + L L+ L GM + + +F + TA A +PG Sbjct: 63 IGLSLGARINDQKLADLGKVLRPSLVIAVWTLLSTFGMTFIIHQFTP-NMATALFAAAPG 121 Query: 299 GLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 G+ + V+A +A + ++ Q +RL I+ P IAR++ + Sbjct: 122 GISEMTVLALVYDAAVPIVSTYQFVRLVVIISVVPLIARWLQGRQKSKD 170 >UniRef50_B4AUN7 Membrane protein AbrB duplication n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AUN7_9CHRO Length = 369 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 95/330 (28%), Positives = 154/330 (46%), Gaps = 6/330 (1%) Query: 22 AVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGCMIAQNLTGSILTTLAVN 80 + +P LLGP++ G++ ++ LP S AAQ I+ A + + S L A Sbjct: 33 LLDIPGDWLLGPLLIGVLATLNPDKAQPLPPSLATAAQVIIALGTAASFSLSTLFQAAHY 92 Query: 81 WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVA 140 +L +++T G+LL R++ + TG GS PG ++VAM+++ GAD VA Sbjct: 93 TLAMLMCIVLTGGLCLGKGYLLWRWAGIDIKTGFLGSIPGAGHSIVAMSEEMGADALAVA 152 Query: 141 FMQYLRVLFVAGAAVLVTRMMLGDNA-----EAVNQHIVWFPPVSINLLLTILLAVVAGT 195 QYLR+L V L+ ++ +V H S+NL L LL + Sbjct: 153 VFQYLRILLVLILIPLLAGYFFPVDSVSVNVPSVITHQFSLTEFSVNLALLTLLGALGVL 212 Query: 196 VGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRA 255 G LRLP + P+L G + + LP+ +L + + +G IGL F+ Q + Sbjct: 213 GGRWLRLPQAVFIGPLLTGLLAFWFFPYPLYLPKLVLNIGLLLLGLSIGLKFNWQAAQKL 272 Query: 256 LRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMA 315 ++ + L+ + L+ C G+ + +D +TA L ++PGGL V D Sbjct: 273 IKAVLIELILVIILILGCLGVGYEFHWLTGVDLITALLGSTPGGLMAVMAATIQLGGDSG 332 Query: 316 LIMAMQTLRLFSILLTGPAIARFISTYAPK 345 L++ MQ R+F ILL P +A F+ K Sbjct: 333 LVLGMQMSRMFLILLITPWLASFLLKTPQK 362 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 1/147 (0%) Query: 21 LAVHLPAALLLGPMIAGIIFS-MRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 + LP A+ +GP++ G++ L LP+ +LG I L Sbjct: 215 RWLRLPQAVFIGPLLTGLLAFWFFPYPLYLPKLVLNIGLLLLGLSIGLKFNWQAAQKLIK 274 Query: 80 NWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLV 139 I L ++++ +L VG+ + + T GS+PGG A++A G D LV Sbjct: 275 AVLIELILVIILILGCLGVGYEFHWLTGVDLITALLGSTPGGLMAVMAATIQLGGDSGLV 334 Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNA 166 MQ R+ + + +L Sbjct: 335 LGMQMSRMFLILLITPWLASFLLKTPQ 361 >UniRef50_D2S6B3 Membrane protein AbrB duplication n=2 Tax=Actinomycetales RepID=D2S6B3_9ACTO Length = 355 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 110/336 (32%), Positives = 171/336 (50%), Gaps = 3/336 (0%) Query: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGCMIAQ 67 + +L +++ + LP+ L G ++AG++ + G L +PR A AAQ ++G I Sbjct: 16 VVATALAVTLALDVLDLPSPSLFGGLVAGLVRGLAGRRRLAVPRPATTAAQGLIGVSIGA 75 Query: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127 + L + +W VL + + TLL S + G L+ + TGA+ GGA+ + A Sbjct: 76 LVDLDTLEAIGRDWLPVLLVTVGTLLLSVLAGLLMRLQPGVSPVTGAFAMVAGGASGITA 135 Query: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTI 187 M+++ GAD R+VA +QYLRVL + + + G + + P LL Sbjct: 136 MSRELGADERMVAVLQYLRVLLIVVLMPVAAVALFGAEPGSGGTTVDDAGPGWPAGLLFA 195 Query: 188 LLAVVAGT-VGCLLRLPSGTMLIPMLAGAVLQSGQLITIE-LPEWLLAMAYMAIGWRIGL 245 + ++AGT + LLR+P T+L P+L A L G L +P L A++ IG +GL Sbjct: 196 AVCLLAGTPLARLLRIPVPTLLGPLLVAAGLDLGGLSGGADVPAPLGTAAFLVIGLVVGL 255 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 FD+ L R +P L I L+A CAG+ L + AYLAT+PGGL V Sbjct: 256 NFDRDSLRTVGRAMPLALAVILGLVAACAGLGAVLAATTGASALDAYLATTPGGLYAVLA 315 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 A AD ++A+Q LRLF +LL+ P +AR++ Sbjct: 316 TAQDGGADATFVLAVQVLRLFVMLLSAPLLARWLRR 351 Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 2/167 (1%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ--LPRSAFLAAQAI 60 V L + + +P LLGP++ + G++ +P AA + Sbjct: 189 PAGLLFAAVCLLAGTPLARLLRIPVPTLLGPLLVAAGLDLGGLSGGADVPAPLGTAAFLV 248 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G ++ N L T+ P+ LA++L + + A +G +L + ++PG Sbjct: 249 IGLVVGLNFDRDSLRTVGRAMPLALAVILGLVAACAGLGAVLAATTGASALDAYLATTPG 308 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAE 167 G A++A AQD GAD V +Q LR+ + +A L+ R + Sbjct: 309 GLYAVLATAQDGGADATFVLAVQVLRLFVMLLSAPLLARWLRRSEGG 355 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 57/163 (34%) Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 + A+ +L LPS ++ ++AG V + +P A IG IG Sbjct: 16 VVATALAVTLALDVLDLPSPSLFGGLVAGLVRGLAGRRRLAVPRPATTAAQGLIGVSIGA 75 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 D L R +LL L + + + +T A GG + Sbjct: 76 LVDLDTLEAIGRDWLPVLLVTVGTLLLSVLAGLLMRLQPGVSPVTGAFAMVAGGASGITA 135 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 ++ AD ++ +Q LR+ I++ P A + P Sbjct: 136 MSRELGADERMVAVLQYLRVLLIVVLMPVAAVALFGAEPGSGG 178 >UniRef50_UPI0001AF51FB hypothetical protein MkanA1_02057 n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF51FB Length = 411 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 97/344 (28%), Positives = 153/344 (44%), Gaps = 9/344 (2%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMI-AGIIFSMRGITLQLPRSAFLAAQAILGCM 64 W +L++ L + F A H+P L+ + AG + + G + AQ +G Sbjct: 11 WLCCLLLTMTLGLLFSAFHMPIGWLIAALAGAGCMAVLAGREFVPHKFLLRPAQGCIGMA 70 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSS-LPGNTGAWGSSPGGAA 123 +A L+G TT+A I TL+ + G +L R + L T + GGA+ Sbjct: 71 VAVPLSGLASTTIAGYLGISAVCSAATLILCLVCGLVLTRAAKTLSPATALLSTLAGGAS 130 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 + MA + D R VA QYLRV+ VA LV + + A A H ++ Sbjct: 131 GICTMAPELRVDHRYVALSQYLRVVVVALTVPLVLQCV---GAPAARSHPAGSHVTLVSS 187 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITI--ELPEWLLAMAYMAIGW 241 + I++ V AG G + P+ ++ PML V Q LP L A+AY+ IGW Sbjct: 188 VAAIVVIVAAGYAGLKWKWPAPFLIAPMLVALVTQLPGPGQFVLALPPALNAVAYVVIGW 247 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 + G L + LR LP I +A C + + ++ + + F AYLAT+PGG+ Sbjct: 248 QAGGAVTLGALRQCLRLLPLTCAFIGVAVAGCLVLTFVVSAWTGVSFAQAYLATTPGGIY 307 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 +AA +A L+ MQ LRL + + ++ ++T Sbjct: 308 --VALAASDSAAEPLVATMQVLRLLVMNIAAIIGSKLLTTQKNS 349 Score = 60.6 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 1/166 (0%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L +LL + G + +P G ++ + + ++LL A IG Sbjct: 11 WLCCLLLTMTLGLLFSAFHMPIGWLIAALAGAGCMAVLAGREFVPHKFLLRPAQGCIGMA 70 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMH-IDFMTAYLATSPGGLD 301 + + L + A L +C LTR + TA L+T GG Sbjct: 71 VAVPLSGLASTTIAGYLGISAVCSAATLILCLVCGLVLTRAAKTLSPATALLSTLAGGAS 130 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 + +A D + Q LR+ + LT P + + + A + Sbjct: 131 GICTMAPELRVDHRYVALSQYLRVVVVALTVPLVLQCVGAPAARSH 176 Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 5/175 (2%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG---ITLQLPRSAFLAA 57 + ++ V+ + L PA L+ PM+ ++ + G L LP + A Sbjct: 182 VTLVSSVAAIVVIVAAGYAGLKWKWPAPFLIAPMLVALVTQLPGPGQFVLALPPALNAVA 241 Query: 58 QAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGS 117 ++G +T L P+ A + V + ++ +++ ++ + + Sbjct: 242 YVVIGWQAGGAVTLGALRQCLRLLPLTCAFIGVAVAGCLVLTFVVSAWTGVSFAQAYLAT 301 Query: 118 SPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH 172 +PGG VA+A A LVA MQ LR+L + AA++ ++++ N+ Sbjct: 302 TPGGIY--VALAASDSAAEPLVATMQVLRLLVMNIAAIIGSKLLTTQKNSFPNEP 354 >UniRef50_C8S2H9 Putative ammonia monooxygenase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2H9_9RHOB Length = 370 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 70/344 (20%), Positives = 132/344 (38%), Gaps = 9/344 (2%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-----LQLPRSAFLAAQAI 60 + + + A+ +P L+LG ++ + G + +P + Sbjct: 28 LAITLAIGTAGGLLGWALSVPLGLMLGSLLTVGSVAALGRRPFGRQVAVPPKLRFFFVPV 87 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G I T ++L + W +LA+ L + G+ + R L +T +GS PG Sbjct: 88 IGVAIGGAFTPAVLAQIPGWWASLLALCLYIPAAHLC-GFWIYRRGGLDRSTAFFGSVPG 146 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH---IVWFP 177 G V + ++ GAD +++ +Q+LR++ A L + G + + P Sbjct: 147 GLIESVTLGEEAGADGQMLVLLQFLRLILTIVAVPLAFMALTGHAVGSASGAKMVGASVP 206 Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 + + + V G LRLP+ M P++A A+L P W + + Sbjct: 207 LGWGDAAMLLAAGVGGFWGGRWLRLPAAIMTGPIIASALLHLAGGTQTVPPAWAVGATQV 266 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 IG +G F +R L + L + G A + + A+LA +P Sbjct: 267 VIGSVLGARFAGMPPGTLVRAARLALANAAVALVLALGFALAVGPLVGQPVAAAFLAFAP 326 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 GGL +++IA + + A R+ + A+A + Sbjct: 327 GGLAEMSLIALSLQMSVVYVTAHHVARIVLSVSIARAMAGRVVR 370 Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 69/181 (38%), Gaps = 5/181 (2%) Query: 171 QHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQ----LITIE 226 + L +T+ + G +G L +P G ML +L + + + Sbjct: 16 PALPIAALDLPALAITLAIGTAGGLLGWALSVPLGLMLGSLLTVGSVAALGRRPFGRQVA 75 Query: 227 LPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHI 286 +P L IG IG F +L + LL++ + + + R + Sbjct: 76 VPPKLRFFFVPVIGVAIGGAFTPAVLAQIPG-WWASLLALCLYIPAAHLCGFWIYRRGGL 134 Query: 287 DFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 D TA+ + PGGL + + AD +++ +Q LRL ++ P ++ +A Sbjct: 135 DRSTAFFGSVPGGLIESVTLGEEAGADGQMLVLLQFLRLILTIVAVPLAFMALTGHAVGS 194 Query: 347 S 347 + Sbjct: 195 A 195 Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 1/153 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPR-SAFLAAQAIL 61 ML + G + LPAA++ GP+IA + + G T +P A A Q ++ Sbjct: 209 WGDAAMLLAAGVGGFWGGRWLRLPAAIMTGPIIASALLHLAGGTQTVPPAWAVGATQVVI 268 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G ++ G TL + LA V L+ + + P +PGG Sbjct: 269 GSVLGARFAGMPPGTLVRAARLALANAAVALVLALGFALAVGPLVGQPVAAAFLAFAPGG 328 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAA 154 A M +A + V R++ A Sbjct: 329 LAEMSLIALSLQMSVVYVTAHHVARIVLSVSIA 361 >UniRef50_Q5LXH6 Membrane protein, putative n=2 Tax=root RepID=Q5LXH6_SILPO Length = 354 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 129/345 (37%), Gaps = 2/345 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 + + + L ++ VH+P ALL GP +A + + G++L + A ++G Sbjct: 8 PRRDLLTLAVGALGALIATLVHMPMALLAGPAVAVSLAGLCGLSLHISPRLRDAGFLVIG 67 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I + + + + +TL + WL+ R + + ++PG Sbjct: 68 LSIGSLVGPESIEAMMRWPVAFGLLAGLTLATPWAGRWLIPRLLPIDRDEAFLAAAPGHL 127 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 + ++A+A + + +R++ + L + + + Q P Sbjct: 128 SLVIALADSLQLSLTRPVVLASIRLMALTLLVPLAASLAGIEIGPGLPQLAAVTPWAW-- 185 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 +L I+ A++ V L+LP+ ++ ++ A LP W + + +G Sbjct: 186 ILGQIVAALLLAPVLKALKLPAHVLIAGIVVAATTHLAGWTAGGLPGWAAQASLILMGAM 245 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG F + L L + + A + + L SPGGL+T Sbjct: 246 IGSRFGGMGWRELRQSLTAGLAIVVLTTGLATLAALPAAYLSGLPLLDVLLGFSPGGLET 305 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 + +++A AD + + A RL + + A ++ +S Sbjct: 306 MIILSAALGADPSFVAAAHLFRLSVLAVVLTLYATDVARRGQGKS 350 Score = 53.7 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 1/167 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAI 60 P V +LLL+ A+ LPA +L+ ++ + G T LP A A+ + Sbjct: 182 PWAWILGQIVAALLLAPVLKALKLPAHVLIAGIVVAATTHLAGWTAGGLPGWAAQASLIL 241 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G MI G L + LAI+++T + + S LP G SPG Sbjct: 242 MGAMIGSRFGGMGWRELRQSLTAGLAIVVLTTGLATLAALPAAYLSGLPLLDVLLGFSPG 301 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAE 167 G M+ ++ GAD VA R+ +A L + Sbjct: 302 GLETMIILSAALGADPSFVAAAHLFRLSVLAVVLTLYATDVARRGQG 348 >UniRef50_A8LC15 Putative ammonia monooxygenase n=1 Tax=Frankia sp. EAN1pec RepID=A8LC15_FRASN Length = 358 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 86/342 (25%), Positives = 154/342 (45%), Gaps = 3/342 (0%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCMIAQN 68 ++ + +I VH P+ LLG +I G FS+ G + P A A++G Sbjct: 17 VIILVAATILMHLVHSPSPYLLGGLIGGAAFSLAFGAPWRFPEPARHFGMALIGVSAGAL 76 Query: 69 LTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAM 128 + ++ +A VL + VTL+ S G +LV + T + S G A+ + AM Sbjct: 77 IDSDVIRRIASQPVEVLGGVAVTLVFSMATGLVLVLSPKVNLATAVFSSMAGAASGVSAM 136 Query: 129 AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVN--QHIVWFPPVSINLLLT 186 A++ AD +V+ +QY RV+ V + LV ++ + + P + +L+ T Sbjct: 137 AKELDADDAIVSAVQYARVVVVVVSLSLVAPILDRSGSLSPADRGPAAVEPVLWQSLVFT 196 Query: 187 ILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLG 246 L V + +L +++PML + + + +PE LL + Y G +G Sbjct: 197 ALCMGVGLLLAQVLSFSGSRLVVPMLLSMAVALVVSVPLAVPEPLLDLGYTITGLAVGFS 256 Query: 247 FDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVI 306 F + +R P +L+ + + CA + R + I + YLA +PGGL V + Sbjct: 257 FTAATIRLLIRLFPLVLVQLVLSVGGCAVIGIVFARAVGIPDLAGYLAMTPGGLPAVTAV 316 Query: 307 AAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 A S A++ L++ MQ +R+F+ +L+ I + + A Sbjct: 317 AVQSGAEVGLVITMQLVRVFAAILSASLIGTLVRRRSRLTGA 358 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 62/165 (37%) Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRI 243 L +++ V A + L+ PS +L ++ GA PE IG Sbjct: 14 LCGVIILVAATILMHLVHSPSPYLLGGLIGGAAFSLAFGAPWRFPEPARHFGMALIGVSA 73 Query: 244 GLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTV 303 G D ++ R ++L + L L ++ TA ++ G V Sbjct: 74 GALIDSDVIRRIASQPVEVLGGVAVTLVFSMATGLVLVLSPKVNLATAVFSSMAGAASGV 133 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + +A +AD A++ A+Q R+ ++++ +A + A Sbjct: 134 SAMAKELDADDAIVSAVQYARVVVVVVSLSLVAPILDRSGSLSPA 178 >UniRef50_Q1GD07 Putative ammonia monooxygenase n=2 Tax=Ruegeria RepID=Q1GD07_SILST Length = 342 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 65/328 (19%), Positives = 134/328 (40%), Gaps = 3/328 (0%) Query: 10 CVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNL 69 +++L ++ F A+ P+A L G A + ++ G+ +++P A +LG I ++ Sbjct: 13 LGVAVLGTLIFEAIGFPSAPLTGSAAAVSLAALFGLPIRMPVWLRTTAFVLLGINIGSSV 72 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T +L + + + + +S I L R+ A ++PG + ++A++ Sbjct: 73 TREMLASALAWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAALAAAPGHLSYVLALS 132 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILL 189 G +A +Q +RVLF+ ++ ++ G + + + + +L + + Sbjct: 133 LSDGGQTSRIAVVQSIRVLFLTLCVPVLVSLVFG---ATGVELMPEYVLSNWHLAALVGV 189 Query: 190 AVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDK 249 +V G V L +P+ +L + A + PE +A++ +G IG F Sbjct: 190 TLVVGAVFDRLNIPAAYLLAGIFCSAAGHIFAVTPGRPPEAATILAFLVMGTLIGSRFVG 249 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 Q L L + + + M + +A +PGG++ +A IA Sbjct: 250 QRLADLKVDFAAGLWVTGINVTVTLIAIGVAMQVMGLSPALLIVAFAPGGVEAMAAIAVT 309 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIAR 337 D A + A +RL + + P R Sbjct: 310 LGLDPAFVAAHHVMRLMILTVLMPLALR 337 Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 1/165 (0%) Query: 175 WFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAM 234 L+ + +AV+ + + PS + A ++ L I +P WL Sbjct: 1 MTLTDVFGLVGALGVAVLGTLIFEAIGFPSAPLTGSAAAVSLAALFGL-PIRMPVWLRTT 59 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 A++ +G IG +++L AL I + +L GL R+M A LA Sbjct: 60 AFVLLGINIGSSVTREMLASALAWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAALA 119 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 +PG L V ++ + I +Q++R+ + L P + + Sbjct: 120 AAPGHLSYVLALSLSDGGQTSRIAVVQSIRVLFLTLCVPVLVSLV 164 >UniRef50_B2A0P8 Putative ammonia monooxygenase-like protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0P8_NATTJ Length = 383 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 71/348 (20%), Positives = 126/348 (36%), Gaps = 30/348 (8%) Query: 22 AVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCMIAQNLTGSILTTLAVN 80 + LPAA +LG ++ + G+ L LP+ L Q +LG M+ L + +L Sbjct: 35 KIKLPAAPVLGGVLLIGSLRVMGLQLPFLPQPVVLGLQIMLGVMVGSRLDRQAMKSLKTI 94 Query: 81 WPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVA 140 + I + + + G+L+ S L T GSS GG M +A+D GAD V Sbjct: 95 ALPAVLISTWAVTITLVFGFLIAAISGLETTTAILGSSIGGLPEMTVLAEDTGADTVTVV 154 Query: 141 FMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN------------------ 182 LRVL + + N N Sbjct: 155 MFHILRVLSTMLVFPFILSHFSRKSQAQANTTTSTDTTSYANYQQMGTSQSPGDNGKTQN 214 Query: 183 ---------LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLA 233 LLLT+ +A G + L+ +P+G ++ M+ + + P L Sbjct: 215 KYQKLNPIKLLLTLAVAGGFGGLLILVGVPAGGLVGGMVFIIIANYFEFPVEVPPRKALN 274 Query: 234 MAYMAIGWRIGLGFDKQILLRA--LRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTA 291 + IG + + + + ++LS+ LA G+A+ + + ++ Sbjct: 275 WFLVGIGLMVSNEVSPETMELILSGELVIPLVLSVTLTLASSFGVAYLINKLTGWEYTLC 334 Query: 292 YLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 +LA++P G + A D + + RL ++ L P + Sbjct: 335 FLASAPAGFTVMTGFALNEGYDPVRVSLLHLSRLVTLKLVIPFLFMIF 382 Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 61/146 (41%) Query: 199 LLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRP 258 ++LP+ +L +L L+ L LP+ ++ + +G +G D+Q + Sbjct: 35 KIKLPAAPVLGGVLLIGSLRVMGLQLPFLPQPVVLGLQIMLGVMVGSRLDRQAMKSLKTI 94 Query: 259 LPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIM 318 +L + I + + ++ TA L +S GGL + V+A + AD ++ Sbjct: 95 ALPAVLISTWAVTITLVFGFLIAAISGLETTTAILGSSIGGLPEMTVLAEDTGADTVTVV 154 Query: 319 AMQTLRLFSILLTGPAIARFISTYAP 344 LR+ S +L P I S + Sbjct: 155 MFHILRVLSTMLVFPFILSHFSRKSQ 180 >UniRef50_A1T9W3 Putative ammonia monooxygenase n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T9W3_MYCVP Length = 343 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 103/343 (30%), Positives = 163/343 (47%), Gaps = 3/343 (0%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR--GITLQLPRSAFLAAQAIL 61 +W +L ++ +S F LP LL G + +++++ L+LP S F A QA++ Sbjct: 2 RRWLVLILMVAAVSSLFTLARLPTPLLFGGLAGALLYALVRPQAPLRLPDSWFQAGQAVV 61 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G ++ ++ L L W +V+ + +L+ S +VG LL+R T + S GG Sbjct: 62 GVIVGASMDWHSLGALGPRWLVVVGVSCFSLVVSVLVGRLLIRR-GASPATATFASVAGG 120 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 AA + AMA D GAD R+VA +QYLR+L V LV ++ G + + Sbjct: 121 AAGLTAMADDLGADARVVAVLQYLRLLVVLVTMPLVVTLVFGAREDGPALGVTGTDWRVD 180 Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 + +A L + + ++A + +P + A+ Y+ IG Sbjct: 181 VPFVAAAVACGLLAGRLLRLPSAAILGPLLVAALLTLVPFFDGAAVPPVVEALGYLVIGV 240 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 ++GL F L R LP LL+I L CAG+ W LT + AYLAT+PGG+ Sbjct: 241 QVGLKFTAASLRAIGRMLPTALLTIVVTLVACAGLGWVLTVTTDASPLDAYLATTPGGIY 300 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 V IAA ++ D+A + A Q LRL +L + P IA ++ A Sbjct: 301 AVLGIAAATDGDVAFVAAAQMLRLLIVLASAPLIAAYLRRAAS 343 Score = 54.8 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 2/167 (1%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQL-ITIELPEWLLAMAYMAIGW 241 L+ IL+ ++ L RLP+ + + + + + LP+ +G Sbjct: 4 WLVLILMVAAVSSLFTLARLPTPLLFGGLAGALLYALVRPQAPLRLPDSWFQAGQAVVGV 63 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G D L ++ L + + L R TA A+ GG Sbjct: 64 IVGASMDWHSLGALGPRWLVVVGVSCFSLVVSVLVGRLLIRR-GASPATATFASVAGGAA 122 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 + +A AD ++ +Q LRL +L+T P + + A Sbjct: 123 GLTAMADDLGADARVVAVLQYLRLLVVLVTMPLVVTLVFGAREDGPA 169 >UniRef50_Q3IVJ5 AbrB protein (AidB regulator) n=3 Tax=Rhodobacteraceae RepID=Q3IVJ5_RHOS4 Length = 354 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 187/345 (54%), Gaps = 3/345 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 LQW +L V L G A+ LPA L++GP+I G IF +RG +++PR A+ AAQ I G Sbjct: 10 WLQWAVLAVGGLAAGQGLQALGLPAGLMVGPLILGAIFGLRGAQVRMPRPAYQAAQGIAG 69 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 C+IA ++ IL P++ +++T L++ G + ++ + WG PG A Sbjct: 70 CLIALHIDPGILARAVELGPVLGIFVVLTFLAACATGLIAAAWTGIDREVAIWGFLPGMA 129 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 ++A++ + G D R+VAF+Q LR++ V + V V ++ G A ++ P + Sbjct: 130 GTVIAISHERGLDSRMVAFIQILRLMMVISSMVGVAMLLAGTGAHPLSGTAA--PGLLST 187 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L + A+ L LP+G L+P+ A L + I +P WL+A A++ +G + Sbjct: 188 LRAGGIAALGVAAARWLPALPAGASLVPLTLAAGLSVAG-VNIAMPGWLVAAAFLWLGLQ 246 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IGL F +++ LR LP ++ + L+ CAG L+ +D ++A LAT PG +D+ Sbjct: 247 IGLRFTPELMRTGLRALPALVAASLLLILFCAGSGLLLSWIADVDPLSALLATVPGSIDS 306 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 +A+IA G+ AD+A +M +QT+RLF++ L GP A R Sbjct: 307 IAIIAIGAEADVAFVMTLQTIRLFAVALLGPMAAMLFLRLLRPRP 351 Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 1/164 (0%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 P + + + + AG L LP+G M+ P++ GA+ + +P A Sbjct: 8 PAWLQWAVLAVGGLAAGQGLQALGLPAGLMVGPLILGAIFGLRG-AQVRMPRPAYQAAQG 66 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 G I L D IL RA+ P + + + + ID A P Sbjct: 67 IAGCLIALHIDPGILARAVELGPVLGIFVVLTFLAACATGLIAAAWTGIDREVAIWGFLP 126 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 G TV I+ D ++ +Q LRL ++ + +A ++ Sbjct: 127 GMAGTVIAISHERGLDSRMVAFIQILRLMMVISSMVGVAMLLAG 170 >UniRef50_Q1I8F5 Putative ammonia monooxygenase n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I8F5_PSEE4 Length = 338 Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 139/344 (40%), Gaps = 7/344 (2%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 +Q M ++ L + G LP L+G + + G+ +++P Q +LG Sbjct: 1 MQCLMPIPIAALGAWGGYLSGLPLGTLIGAVCTVTLAGKLGLNMRMPLPFVATVQLLLGL 60 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + +T S+L L+ I+ +L+ L + L RY G+ PG A Sbjct: 61 SVGSTVTASMLGELSD-ISILAGLLVCMGLQILVGYNWLRRYERWSHLESLLGAMPGAMA 119 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 A++ ++ + G +AF+ V A+L+ ++ + + L Sbjct: 120 AVMTVSGEQGPSSGRIAFVH-----IVRLLALLLVVTLIAGGQGSGATASNGNLDDYLRL 174 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQL-ITIELPEWLLAMAYMAIGWR 242 + L+AV+AG + L +P+ ML ++ A + G ++++P + A + +G Sbjct: 175 VPPALMAVIAGYLLERLEVPAPYMLTGVMCAAAVNIGYPEASLQVPAPVATAALILLGGL 234 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG+ L LR + L+ L +A +R F+ +++ PGG++ Sbjct: 235 IGIRLRDITLRDVLRHVRAGLVVTSLTLCCTVLVALAASRLTDRPFLALFMSWVPGGVEV 294 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 + A D A +M +R+ I L + R + P R Sbjct: 295 MTAAALLLKLDPAFVMLNHVVRMTLIHLAPAVLPRRLLREQPTR 338 >UniRef50_D1Y8H5 Membrane protein AbrB duplication n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8H5_9BACT Length = 353 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 76/343 (22%), Positives = 131/343 (38%), Gaps = 9/343 (2%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL-GCMI 65 L + G + PAA +LG + + ++ G+ L ++ +L G ++ Sbjct: 11 AALFAVGYAGFRGAKKMGWPAAAMLGSLFLLGLLNLSGLRLPFYQAPVSFVSKVLSGVIL 70 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSS--LPGNTGAWGSSPGGAA 123 Q + + + + V +++S G LL + L T SS GG A Sbjct: 71 GQRIDRHMASAVRKMLLPVSLASFWMVMASIATGLLLFAVAGGRLSLMTCLASSSAGGIA 130 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPP----- 178 M A GAD+ +VAF Q +R++ + T + + AV Sbjct: 131 EMSIFAMSAGADVGIVAFFQSVRIIVLYATLPFSTGWLARRASGAVLPKAPAPDAETRVS 190 Query: 179 -VSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 + + + R PS M+ M V+ + LP L + A + Sbjct: 191 FTPGEIARFAAVTGALALLFEAARFPSAYMIGAMCGAGVMNLRSGKVMTLPPRLRSAAQI 250 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 + I +G + + + S+ + A +AW + R D MT+ LAT P Sbjct: 251 CLSMTISVGLSPRTIHLVRELFFPLAFSVALIQAFSFLLAWIMHRLTRWDVMTSVLATCP 310 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 GGL VA A +AD ++ +R+ SI++ P IAR + Sbjct: 311 GGLSQVAFFAEDLHADPLIVGVFHAVRMISIVVCVPLIARLFA 353 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 61/169 (36%), Gaps = 2/169 (1%) Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 S + + P+ ML + +L L + ++ + Sbjct: 7 SAGTAALFAVGYAGFRGAKKMGWPAAAMLGSLFLLGLLNLSGLRLPFYQAPVSFVSKVLS 66 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMH--IDFMTAYLATSP 297 G +G D+ + + L + L+ F ++ L + MT ++S Sbjct: 67 GVILGQRIDRHMASAVRKMLLPVSLASFWMVMASIATGLLLFAVAGGRLSLMTCLASSSA 126 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 GG+ +++ A + AD+ ++ Q++R+ + T P +++ A Sbjct: 127 GGIAEMSIFAMSAGADVGIVAFFQSVRIIVLYATLPFSTGWLARRASGA 175 >UniRef50_C2AKB5 Membrane protein AbrB duplication n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AKB5_TSUPA Length = 402 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 103/334 (30%), Positives = 156/334 (46%), Gaps = 9/334 (2%) Query: 19 GFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCMIAQNLTGSILTTL 77 +PA LL + G + G + +P A QA +G M+ L + T+ Sbjct: 57 LAALFGVPAPSLLAALALGAGLRIALGREISVPADASKWTQAFIGVMLGSYLNLEAIRTV 116 Query: 78 AVNWPIVLAILLVTLLSSAIVGWLLVR-YSSLPGNTGAWGSSPGGAAAMVAMAQDYGADI 136 L I ++T++ S W L R ++L T G GG++A+V + + GA Sbjct: 117 GPVIAPFLLISVLTIVLSMFTAWALSRAVTALDQRTATLGLMVGGSSAVVTLCDELGARK 176 Query: 137 RLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVS-----INLLLTILLAV 191 +V MQY RVL V+ A V + G A Q + V L + I+ A+ Sbjct: 177 DVVGVMQYSRVLLVSLTAPFVMTALAGTAAATSRQRVTDLQIVGRGDQIAGLSIAIVFAI 236 Query: 192 VAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLA-MAYMAIGWRIGLGFDKQ 250 V +G LRLP G ++ PML AV+ QL P+ + + +G +GL FD++ Sbjct: 237 VGMWLGRKLRLPGGGLIGPMLVAAVIGGAQLTRGFAPQGAFKELLLIVVGLEVGLMFDRR 296 Query: 251 ILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGS 310 +L R LP I + I L + A +A R + AYLAT+PGG++ V AAGS Sbjct: 297 MLRRLAHLLPAIGVGILFLCGVVALLAAAAARITGVPLADAYLATTPGGINAVVASAAGS 356 Query: 311 N-ADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 A+MALI +Q+LRL ++L P I ++ A Sbjct: 357 GDANMALIATVQSLRLIIVVLALPLIVVAMNRLA 390 >UniRef50_B7RQ37 Membrane protein AbrB duplication n=4 Tax=Rhodobacteraceae RepID=B7RQ37_9RHOB Length = 347 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 64/334 (19%), Positives = 131/334 (39%), Gaps = 2/334 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 ++ + + L ++ AV P LL+GP + + + G+ + + S A ++G Sbjct: 10 LMTTALTVCVGTLGALLGWAVGAPIYLLVGPAVLVSLAGLAGLKMGISLSLRNACFVVIG 69 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 + S L + + +L++ + WLL R+ + ++PG Sbjct: 70 LAVGAGFDRSALDAMIRWPLAFVVVLVMIWVMMVFSRWLLSRFFGFDRRSALLAAAPGHL 129 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 + ++AMA + G ++ V+ Q +R+L + V M D ++ Sbjct: 130 SFVLAMAAEAGDNVVRVSTTQSVRLLSLTLVVPFVALSMGVDLGGSIVPQGALMGAGLTV 189 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 +LL + + L +P+ ++ PML ++ + LP WL+ AY+ +G Sbjct: 190 VLLALGVGAGLLLG--RLNVPAPMLIGPMLVSSLGHLTETAPGVLPMWLVLPAYLVLGAL 247 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG F + + L L + + A +T + +A +PGG +T Sbjct: 248 IGTRFSGVSMDDLSKGLAAGLAVTGVAVGLALLAAVPVTLALGAPLAHVLVAFAPGGFET 307 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 + + A I A +R+F + + P + Sbjct: 308 MIAMGAVLGVVPGFIAACHMMRIFVLSVLLPVML 341 >UniRef50_C8RVR3 Membrane protein n=2 Tax=Corynebacterium jeikeium RepID=C8RVR3_CORJE Length = 385 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 74/346 (21%), Positives = 136/346 (39%), Gaps = 19/346 (5%) Query: 13 SLLLSIGFLAVHLPAALLLGPMIA-GIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTG 71 S+ AV +PAA + +I GI + P+ A + +Q I+ + + LT Sbjct: 22 SIAAGFACEAVGVPAAWIFSFLIVFGIYAIFSDRQVSPPKKAMIPSQVIIALLCSSPLTT 81 Query: 72 SILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQD 131 T+ L+VTL + WLLVR + T + GGA+AMV ++++ Sbjct: 82 IDFGTIVSYAGPTAMSLIVTLAVCLLASWLLVRIHRVGPATSVLATLAGGASAMVMLSRE 141 Query: 132 YGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQH--------------IVWFP 177 AD R V QYLRV + + ++ + + Sbjct: 142 LNADTRFVTLTQYLRVSIIVLTLPGLVTLLGRVEGGEADAAERASTGKESLLDGLQTNWQ 201 Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT---IELPEWLLAM 234 + +++ + + + S +L+ + + + I L + Sbjct: 202 GIVGAVVVGLAVWAFTRLTARWFSISSPYLLLSIAFAMIGVMVFGVPHEFIAPNGLLEKL 261 Query: 235 AYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLA 294 AY +G + G K L + ++ LP IL I ++A G A+ + + AYLA Sbjct: 262 AYALVGVQAGGTLTKGALRQFVKALPVILGVIALMIASSIGTAFAIAGLWDFKVLDAYLA 321 Query: 295 TSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 T PGG+ V A + + ++ +Q +R+ ++L+ G + I Sbjct: 322 TVPGGIYAVLAFAHDAGSQP-IVTVIQVMRMIAMLVVGAYAPQIIR 366 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 66/173 (38%) Query: 169 VNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELP 228 + Q + P L L +L++ AG + +P+ + ++ + + P Sbjct: 1 MPQLALPSPAKLATLALLTVLSIAAGFACEAVGVPAAWIFSFLIVFGIYAIFSDRQVSPP 60 Query: 229 EWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDF 288 + + + + I + +S+ LA+C +W L R + Sbjct: 61 KKAMIPSQVIIALLCSSPLTTIDFGTIVSYAGPTAMSLIVTLAVCLLASWLLVRIHRVGP 120 Query: 289 MTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 T+ LAT GG + +++ NAD + Q LR+ I+LT P + + Sbjct: 121 ATSVLATLAGGASAMVMLSRELNADTRFVTLTQYLRVSIIVLTLPGLVTLLGR 173 >UniRef50_A6D2G3 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D2G3_9VIBR Length = 339 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 130/343 (37%), Gaps = 7/343 (2%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLL-GPMIAGIIFSMRGITLQLPRSAFLAAQAILG 62 ++ ++ L+ S+ + +P L + + + ++LP + Q ILG Sbjct: 1 MEVLRTILVGLIGSLLGGVLPIPLGELFSAALFVVMYLRLTKTDVRLPSAILTTIQIILG 60 Query: 63 CMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGA 122 I + S L + + P+ + ++L L + + + L + G+ PG Sbjct: 61 LSIGITVHTSELID-SFSLPLFMGLILCMLSQTTVNFFWLYKQEKWTPFESLLGAIPGAL 119 Query: 123 AAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN 182 AA++ ++++ + F +R+L + A +V G + + + P Sbjct: 120 AAILVISEEQEKPSPKIIFSHSIRLLLLVVLAGIVATTGEGTSQLSQTVSLAQIPY---- 175 Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQS-GQLITIELPEWLLAMAYMAIGW 241 L+L +L+ V G + + +P+ +L ++ A+ + + + +PE + A +G Sbjct: 176 LILLTVLSFVFGKIVGKIGIPAPYLLTSLIVAAMFNAQFSSLHLVVPELFIMFATAILGV 235 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 IG L A+ + + + A + D+ LA PG ++ Sbjct: 236 LIGTRLAPTSLKDAVEYSRAGFIVTALGVTVTVVYALIFSYLTSTDWEVLLLAWVPGSVE 295 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAP 344 + +A + A + +RL + + + + + Sbjct: 296 AMTAVALLLGLEPAFVAINHVMRLMMLYMMPVVLKSPLQRLSR 338 >UniRef50_UPI0001C32335 membrane protein AbrB duplication n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32335 Length = 358 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 108/347 (31%), Positives = 170/347 (48%), Gaps = 6/347 (1%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCM 64 W L +LL++ A+ LP+A L G ++ G+ ++ +L F +AQA+ G Sbjct: 7 WLALGAATLLVAWALDALGLPSATLFGALVVGLAVALRLPGRFRLGEGTFRSAQALTGVT 66 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + + L LA W V + TLL + G ++ R + + T A G GGA+ Sbjct: 67 LGCYMQSESLDALAGAWLPVALVSAATLLLCLLAGHVMARVTDVDEPTAALGMVAGGASG 126 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPP----VS 180 +V MA++ GAD R+VAFMQY RVL + A L+ + + A + Sbjct: 127 IVTMARELGADDRIVAFMQYARVLLIVLATPLLVALFFPGHHGAPGIGDGGGDGPFLGTA 186 Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLI-TIELPEWLLAMAYMAI 239 + T+ +A+ G L+RLP+G +L P+L A L + +P L A+ AI Sbjct: 187 GDWAATVAIALAGAAAGRLVRLPAGVLLGPLLLAAGLTLALPDGSFAVPPLLREAAFAAI 246 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G ++GL F + + R R L ++LS+ AL+ C G+A L H+ + AYLAT+PGG Sbjct: 247 GLQVGLRFTVETIRRLGRLLVPVVLSVVALVVACFGLAVVLHATTHVTLLDAYLATTPGG 306 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKR 346 L V A G+ AD ++A+Q LRL ++L P R + + Sbjct: 307 LYVVLAAAVGTGADTTFVVAVQGLRLLVMVLLAPFAVRLLLGDRARP 353 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 54/162 (33%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 P S L ++ L LPS T+ ++ G + L E A Sbjct: 2 PRSAAWLALGAATLLVAWALDALGLPSATLFGALVVGLAVALRLPGRFRLGEGTFRSAQA 61 Query: 238 AIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSP 297 G +G + L + L A L +C + R +D TA L Sbjct: 62 LTGVTLGCYMQSESLDALAGAWLPVALVSAATLLLCLLAGHVMARVTDVDEPTAALGMVA 121 Query: 298 GGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 GG + +A AD ++ MQ R+ I+L P + Sbjct: 122 GGASGIVTMARELGADDRIVAFMQYARVLLIVLATPLLVALF 163 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 52/129 (40%) Query: 45 ITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVR 104 + +P AA A +G + T + L V+ ++ +++ + +L Sbjct: 230 GSFAVPPLLREAAFAAIGLQVGLRFTVETIRRLGRLLVPVVLSVVALVVACFGLAVVLHA 289 Query: 105 YSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGD 164 + + ++PGG ++A A GAD V +Q LR+L + A R++LGD Sbjct: 290 TTHVTLLDAYLATTPGGLYVVLAAAVGTGADTTFVVAVQGLRLLVMVLLAPFAVRLLLGD 349 Query: 165 NAEAVNQHI 173 A Sbjct: 350 RARPRVTAP 358 >UniRef50_Q8KVY0 RC210 n=1 Tax=Ruegeria sp. PR1b RepID=Q8KVY0_9RHOB Length = 333 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 111/278 (39%), Gaps = 2/278 (0%) Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T + +A+ P+++ +VT + +++V L R + + + P MA Sbjct: 53 TFDLSPFVALLAPLLVGAAIVTAILASLVALLTARMAPMGLAQAFLATFPTSPVEAAVMA 112 Query: 130 QDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILL 189 + D + Q +R+ V L + G + F L Sbjct: 113 ERLDCDPAPIVLAQTMRIAAVVIFVPLSIYALDGWPDRSGLIRGGTFD--LWGNGFLATL 170 Query: 190 AVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDK 249 A+ + +LR+ + L P+ A + P +L+ A + +G +G F + Sbjct: 171 AIAGAVLFKVLRISNPYFLGPLTFSAAAAAMDFHPTAFPPLMLSAAQVVLGTWLGSTFRR 230 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 ++L R + S LLAI + A G+ + +D+ L +PGG+ +A+ A Sbjct: 231 ELLRNGRRLIAASAFSTLLLLAIVSAFAVGVAQISGLDWEVLVLGLAPGGVTEMALTAKF 290 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 D+AL+ A Q R+F + P I + ++ + +R Sbjct: 291 LGVDLALVTAFQLTRIFIFMPNIPWIVQLVARFEVRRH 328 Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 1/158 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAILGCMI 65 G L L++ ++ F + + LGP+ + +M P AAQ +LG + Sbjct: 165 GFLATLAIAGAVLFKVLRISNPYFLGPLTFSAAAAAMDFHPTAFPPLMLSAAQVVLGTWL 224 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 +L L+ L + + + S L G +PGG M Sbjct: 225 GSTFRRELLRNGRRLIAASAFSTLLLLAIVSAFAVGVAQISGLDWEVLVLGLAPGGVTEM 284 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG 163 A+ G D+ LV Q R+ + +++ Sbjct: 285 ALTAKFLGVDLALVTAFQLTRIFIFMPNIPWIVQLVAR 322 >UniRef50_B8HRF2 Membrane protein AbrB duplication n=6 Tax=Cyanobacteria RepID=B8HRF2_CYAP4 Length = 365 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 72/338 (21%), Positives = 127/338 (37%), Gaps = 17/338 (5%) Query: 27 AALLLGPMIAGIIFSMRGITLQLP-----RSAFLAAQAILGCMIAQNLTGSILTTLAVNW 81 A + ++ S T P RSA +++G I +++ + L + + Sbjct: 24 LAWIFSGLVVAAGLSYLYQTFNQPLPPPNRSARKVGLSLVGLTIGSSISQANLAPITSHL 83 Query: 82 PIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAF 141 PI + LLS + +G+ R S T + PGG M ++A DY ++ VA Sbjct: 84 PIFALLTFFLLLSGSAIGYCYARLSGTNLLTALLATVPGGVGVMASLAADYDRNVTQVAL 143 Query: 142 MQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWF---PPVSINLLLTILLAVVAGTVGC 198 +Q +RV V L++ ++ G V W P L L +L T+ Sbjct: 144 VQIIRVTAVILGIPLLSGLISGTGINRVVLQREWLSFEPIALGLLCLALLTTGATVTLAG 203 Query: 199 LLRLPSGTMLIPMLAGAVLQ------SGQLITIELPEWLLAMAYMAIGWRIGLGFD---K 249 L +P+ L ++ G SG + P + + + +G IG + + Sbjct: 204 RLGIPAAPFLAAVVVGTSFNPLLTQVSGLDLHFCPPLLVSVLGQILLGLTIGEYWGSQWQ 263 Query: 250 QILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAG 309 R + LS+ L+ A D++T L T+PGG + ++A Sbjct: 264 TPAQLGRRSISGAFLSVMLTLSAGLLAAAIAHHLTTWDWLTCLLVTAPGGAPEMILVALS 323 Query: 310 SNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 N + + A +RL +I + P S P + Sbjct: 324 MNHQVETVTAAHLVRLIAINGSLPLWIYLFSRLDPTPA 361 Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 10/165 (6%) Query: 19 GFLAVHLPAALLLGPMIAG-----IIFSMRGITLQL--PRSAFLAAQAILGCMIAQNLTG 71 + +PAA L ++ G ++ + G+ L P + Q +LG I + Sbjct: 201 LAGRLGIPAAPFLAAVVVGTSFNPLLTQVSGLDLHFCPPLLVSVLGQILLGLTIGEYWGS 260 Query: 72 S--ILTTLAVNWPIVLAILL-VTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAM 128 L + + +TL + + + ++ T ++PGGA M+ + Sbjct: 261 QWQTPAQLGRRSISGAFLSVMLTLSAGLLAAAIAHHLTTWDWLTCLLVTAPGGAPEMILV 320 Query: 129 AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHI 173 A + V +R++ + G+ L + + H Sbjct: 321 ALSMNHQVETVTAAHLVRLIAINGSLPLWIYLFSRLDPTPATAHP 365 >UniRef50_Q399M7 Putative ammonia monooxygenase n=2 Tax=Proteobacteria RepID=Q399M7_BURS3 Length = 347 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 119/329 (36%), Gaps = 4/329 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 ++ + + +P LLLG ++A I + R R Q +LG Sbjct: 1 MKTLAYLACLTAVGLVLRVAGVPHGLLLGAILAASIATSRFGFAPRLRFGLEFVQIVLGT 60 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 + P + +L+ + L R S PG A Sbjct: 61 ATGLLFRSWDTQMVVSIVPSLGVLLVCLATQIVVGSLWLSRVSGWNRADSLLAVYPGALA 120 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINL 183 A+ + + A V + +R+L + G +A + +++ Sbjct: 121 AVFDLLESERA-SAKVIVVHLVRLLSITVLVSCFIPAQAGAPQQAAVAALPVDTWLALAA 179 Query: 184 LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT-IELPEWLLAMAYMAIGWR 242 L+ + + +G L +P+ M+ ++ V + +E+P W + A + +G Sbjct: 180 LVALCVLAGRALLG--LGVPAPFMITAIVLTGVFVRAGWLHDVEVPAWCVDAASVILGAL 237 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG F + L LR L I +L + AWG+ R + +L+ +PG ++T Sbjct: 238 IGAQFRQITLADGLRYGRTGLACIALMLTVAGAFAWGMARLSGYGVLPLWLSYAPGAIET 297 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLT 331 + ++A G ++ +++ RL + Sbjct: 298 ITIVAYGGGLNVVFVLSHHLTRLVVLHFA 326 Score = 47.9 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 2/151 (1%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG--ITLQLPRSAFLAAQA 59 L L L +L L + +PA ++ ++ +F G +++P AA Sbjct: 173 TWLALAALVALCVLAGRALLGLGVPAPFMITAIVLTGVFVRAGWLHDVEVPAWCVDAASV 232 Query: 60 ILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSP 119 ILG +I L LA + + L + W + R S +P Sbjct: 233 ILGALIGAQFRQITLADGLRYGRTGLACIALMLTVAGAFAWGMARLSGYGVLPLWLSYAP 292 Query: 120 GGAAAMVAMAQDYGADIRLVAFMQYLRVLFV 150 G + +A G ++ V R++ + Sbjct: 293 GAIETITIVAYGGGLNVVFVLSHHLTRLVVL 323 >UniRef50_B9KW55 Ammonia monooxygenase n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KW55_RHOSK Length = 341 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 77/320 (24%), Positives = 123/320 (38%), Gaps = 9/320 (2%) Query: 23 VHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWP 82 +P +LG ++ I+S L R A A Q +LGC A LT ++L +AV P Sbjct: 30 FGVPIGWVLGALLGAAIWSNSTGHGGLGRHARRAGQLVLGCATASILTPALLAEMAVALP 89 Query: 83 IVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFM 142 + +V +L + R + + T P G A M +AQD GA + +V Sbjct: 90 AMALAAVVAILVALGFAPAFSRLADVDRKTALLSVLPAGLAEMAGLAQDRGARVEVVTLA 149 Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRL 202 +RV + ++ A + + L+ + L++V Sbjct: 150 HTIRVTALVLTLPVLV--------GAARRPLPPAEGDLRVTLVCLGLSLVLAWAMNRAGF 201 Query: 203 PSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQI 262 + +++P++ GA L LP W + A +AIG +G R R L Sbjct: 202 LNPWIVLPVIVGAALTFAGFRLAALPPWAIVAAQVAIGGSLGSRLQVDRFARMPRVLGAA 261 Query: 263 LLSIFALLAICAG-MAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQ 321 LLS L A A +A ID T LA +PGGL + A A + +++ Q Sbjct: 262 LLSTLLLYAGTALVLAPVCWWIYDIDLATFALALAPGGLAEMLAAAKAIGAAVPMVLGFQ 321 Query: 322 TLRLFSILLTGPAIARFIST 341 LR L+ + Sbjct: 322 LLRSLVTNLSAAWLLGRALR 341 Score = 57.9 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 56/149 (37%), Gaps = 1/149 (0%) Query: 200 LRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPL 259 +P G +L +L A+ + L + +G +L L Sbjct: 30 FGVPIGWVLGALLGAAIWSNSTGHGG-LGRHARRAGQLVLGCATASILTPALLAEMAVAL 88 Query: 260 PQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMA 319 P + L+ + + G A +R +D TA L+ P GL +A +A A + ++ Sbjct: 89 PAMALAAVVAILVALGFAPAFSRLADVDRKTALLSVLPAGLAEMAGLAQDRGARVEVVTL 148 Query: 320 MQTLRLFSILLTGPAIARFISTYAPKRSA 348 T+R+ +++LT P + P Sbjct: 149 AHTIRVTALVLTLPVLVGAARRPLPPAEG 177 >UniRef50_C8NRG7 Transport protein n=13 Tax=Corynebacterium RepID=C8NRG7_COREF Length = 353 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 99/326 (30%), Positives = 151/326 (46%), Gaps = 14/326 (4%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLL-GPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIA 66 ++ LS+ + F V++PA+ +L G ++AG + G L L R + ++I+ + A Sbjct: 2 IVAPLSVAVGWLFTLVNIPASWILAGIIVAGACALVTGEDLPLTRGVHIFGRSIIAVLAA 61 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSS-LPGNTGAWGSSPGGAAAM 125 L + L L I T+ I G LL R + TG GGA+ M Sbjct: 62 LPLISAPGQELLRYLAPGLVISFFTVTVGIIGGLLLSRSRPEILPETGVLSMLAGGASVM 121 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSIN--- 182 +A+D GAD R VA QYLR+L V+ + LVT A + + Sbjct: 122 PVLAKDLGADFRYVALSQYLRLLVVSVSLPLVTTFFAPYGAGSDQGTESPLAVFGLGEFG 181 Query: 183 -------LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLI--TIELPEWLLA 233 L + L+ +V +G LLRLPS +L P++ L + +E P Sbjct: 182 TSTSVVSLAVLGLIILVGEPLGRLLRLPSPAILGPLVLTVTLSLVFPLEVNLEPPSLFKI 241 Query: 234 MAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 +A++AIGW G G + L R LP +L I ALLA+CA A L ++ I + AYL Sbjct: 242 LAFLAIGWMCGGGLNMTALKAFSRQLPATILFIVALLAVCAAAAVLLVFWLDISYFEAYL 301 Query: 294 ATSPGGLDTVAVIAAGSNADMALIMA 319 ATSPG L+TV +++ +A ++ Sbjct: 302 ATSPGALETVLALSSEGDAGPVVVTI 327 Score = 56.4 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 1/164 (0%) Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 + L+V G + L+ +P+ +L ++ + L + I Sbjct: 2 IVAPLSVAVGWLFTLVNIPASWILAGIIVAGACALVTGEDLPLTRGVHIFGRSIIAVLAA 61 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMH-IDFMTAYLATSPGGLDTV 303 L LR L L+ F + + L+R I T L+ GG + Sbjct: 62 LPLISAPGQELLRYLAPGLVISFFTVTVGIIGGLLLSRSRPEILPETGVLSMLAGGASVM 121 Query: 304 AVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRS 347 V+A AD + Q LRL + ++ P + F + Y Sbjct: 122 PVLAKDLGADFRYVALSQYLRLLVVSVSLPLVTTFFAPYGAGSD 165 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 3/143 (2%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG---ITLQLPRSAFLAAQ 58 V+ +L ++ L+ + LP+ +LGP++ + S+ + L+ P + A Sbjct: 185 SVVSLAVLGLIILVGEPLGRLLRLPSPAILGPLVLTVTLSLVFPLEVNLEPPSLFKILAF 244 Query: 59 AILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSS 118 +G M L + L + P + ++ L A LLV + + +S Sbjct: 245 LAIGWMCGGGLNMTALKAFSRQLPATILFIVALLAVCAAAAVLLVFWLDISYFEAYLATS 304 Query: 119 PGGAAAMVAMAQDYGADIRLVAF 141 PG ++A++ + A +V Sbjct: 305 PGALETVLALSSEGDAGPVVVTI 327 >UniRef50_A5G1A0 Putative ammonia monooxygenase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G1A0_ACICJ Length = 354 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 97/299 (32%), Positives = 144/299 (48%), Gaps = 4/299 (1%) Query: 46 TLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRY 105 +PR A LAAQA+LG +I + S L LA + V+ + +TLL S G L+ Sbjct: 55 PEGVPRGATLAAQAVLGVVIGALVRASTLRALAAHAVPVVIVTFITLLVSIGAGLLMGLR 114 Query: 106 SSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDN 165 + TGA + GGA+A+VA+A + GADIR+VA +QYLRV FV LV + Sbjct: 115 RDVDATTGALALTTGGASAVVALAAELGADIRMVAVVQYLRVGFVTATMPLVAAFVF--- 171 Query: 166 AEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITI 225 A + P L L + A + L R+P+G +L P++ A + Sbjct: 172 HAAGHPAAAPRPAGLAGLALVAIAAPAGLVLARLTRMPAGPLLAPLIVAAGITLTGRTGG 231 Query: 226 E-LPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFM 284 +P ++ +AY AIGW+ G+ F + L R LP L I + ICAG+ L Sbjct: 232 ASVPFPIVDLAYAAIGWQAGVRFTRGRLAEIGRALPTALALILLVNVICAGLGVLLAHLA 291 Query: 285 HIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYA 343 YLAT PGG+ +A + D+ ++A+ LR+ ++ T P AR + A Sbjct: 292 GASDFDGYLATLPGGIYAALAMAIAARTDVTFVLAVHVLRVVLVMFTMPLFARLLRRRA 350 Score = 50.6 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 57/157 (36%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 L L V + + +PS + + L L +P A +G Sbjct: 14 WALLALATVALSLLLARVGVPSAALFAALFVATALALAGLAPEGVPRGATLAAQAVLGVV 73 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 IG L +++ F L + G + +D T LA + GG Sbjct: 74 IGALVRASTLRALAAHAVPVVIVTFITLLVSIGAGLLMGLRRDVDATTGALALTTGGASA 133 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 V +AA AD+ ++ +Q LR+ + T P +A F+ Sbjct: 134 VVALAAELGADIRMVAVVQYLRVGFVTATMPLVAAFV 170 >UniRef50_Q0FKP2 Putative uncharacterized protein n=2 Tax=Roseovarius RepID=Q0FKP2_9RHOB Length = 341 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 122/313 (38%), Gaps = 3/313 (0%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIV 84 +PA L+G M+A + + G + +P A A ++G + + S+L L + Sbjct: 29 VPAGALIGAMLAVALMAGLGHAVTVPVIARDLAFLVIGISLGAGIDASVLPHLPGWSISL 88 Query: 85 LAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQY 144 L + + + + A +LL R ++ T S+PG + VA+A + D V +Q Sbjct: 89 LGLAVALVATMAASTFLLQRVFAVDWQTAVLASAPGTMSNAVAIAVEGKGDASGVMILQL 148 Query: 145 LRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPS 204 +R++ + + ++ +A A + V LL+ L G + + Sbjct: 149 MRLVILVTLVPPLAAVLGAPDAAAGGERPVMPLLALAGLLVVGLP---LGRFVGRRGISA 205 Query: 205 GTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILL 264 +L +L V LI P W++ + + G +G K L AL+ + Sbjct: 206 ACLLTGILLSGVGHGAGLIHGAAPSWMVFLGFTMTGAVLGTRISKVDLRSALKLAGAGTV 265 Query: 265 SIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLR 324 + L + A +A +PGG++ +A I D A + A R Sbjct: 266 VVGMALGMALVFALITQALTGFPLGQILIAYAPGGVEAMAAIGLALGYDPAFVAAHHFAR 325 Query: 325 LFSILLTGPAIAR 337 + +L PA R Sbjct: 326 ILILLALVPAFLR 338 Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 1/147 (0%) Query: 202 LPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQ 261 +P+G ++ MLA A++ + +P +A++ IG +G G D +L Sbjct: 29 VPAGALIGAMLAVALMAGLG-HAVTVPVIARDLAFLVIGISLGAGIDASVLPHLPGWSIS 87 Query: 262 ILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQ 321 +L AL+A A + L R +D+ TA LA++PG + IA D + +M +Q Sbjct: 88 LLGLAVALVATMAASTFLLQRVFAVDWQTAVLASAPGTMSNAVAIAVEGKGDASGVMILQ 147 Query: 322 TLRLFSILLTGPAIARFISTYAPKRSA 348 +RL ++ P +A + Sbjct: 148 LMRLVILVTLVPPLAAVLGAPDAAAGG 174 >UniRef50_UPI0000383818 COG3180: Putative ammonia monooxygenase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383818 Length = 224 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 100/221 (45%), Positives = 142/221 (64%), Gaps = 1/221 (0%) Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL 184 MVAMA+DYGAD RLVAFMQY+RV V +A L R++ A + LL Sbjct: 1 MVAMAEDYGADPRLVAFMQYVRVAAVVLSASLAARLLTDVGGPAGTGPTEA-SWSWLGLL 59 Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 T + + L+RLPS ++ PML GAVL + L+ I LP +L AY IGW +G Sbjct: 60 ATAAMTAAGFALAALVRLPSAPLIGPMLLGAVLHASGLLDIVLPAPVLDAAYALIGWYVG 119 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 L F ++ L + LP +L++ A++ +CA AWGLT + I+++TA+LATSPGGLD+VA Sbjct: 120 LRFTRRTLAETVHALPGVLVATAAIIVLCAAWAWGLTGLLPINYLTAFLATSPGGLDSVA 179 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPK 345 +IA GS AD++ ++A+QTLRLF +L+TGP +A++I+ AP Sbjct: 180 IIAIGSKADVSFVLAVQTLRLFVVLVTGPTLAKWIARAAPG 220 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 62/171 (36%), Gaps = 1/171 (0%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGI-TLQLPRSAFLAAQAI 60 L ++ V LP+A L+GPM+ G + G+ + LP AA A+ Sbjct: 54 SWLGLLATAAMTAAGFALAALVRLPSAPLIGPMLLGAVLHASGLLDIVLPAPVLDAAYAL 113 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 +G + T L P VL ++ A W L + T +SPG Sbjct: 114 IGWYVGLRFTRRTLAETVHALPGVLVATAAIIVLCAAWAWGLTGLLPINYLTAFLATSPG 173 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQ 171 G ++ +A AD+ V +Q LR+ V + + + Sbjct: 174 GLDSVAIIAIGSKADVSFVLAVQTLRLFVVLVTGPTLAKWIARAAPGDRVP 224 >UniRef50_D2YM36 Protein abrB n=35 Tax=Vibrio RepID=D2YM36_VIBMI Length = 347 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 119/303 (39%), Gaps = 7/303 (2%) Query: 21 LAVHLPAALLLGPM-IAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAV 79 + +P + + + ++ R +T+ P+ L Q +LG + ++ + L Sbjct: 26 TLLSIPLSEMFIAAGLIIVLHKKRFLTIHTPKWLLLFVQIVLGISVGATISLTELGATLT 85 Query: 80 NWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLV 139 P+++ ++ L L + G+ PG AA++ +++ V Sbjct: 86 -VPVIVGLVCCLTLQIISSYLWLTKREGWTPFESLLGAVPGAMAAILVISESSQKPSTKV 144 Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCL 199 + +R++ + A+L++ +AV+ + L++++ G L Sbjct: 145 VYSHSVRLMILTLLALLISN----SAPDAVSVEGSLTAYAWLIFFTLALVSLLLGKASTL 200 Query: 200 LRLPSGTMLIPMLAGAVLQSG-QLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRP 258 L +P+ ML +L A S I ++LP+W++ A +G IG L A+ Sbjct: 201 LGIPAPYMLAALLVTASFNSFSTGIEMQLPKWMVLFATALLGILIGSRIADTTLREAIAY 260 Query: 259 LPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIM 318 + L + G++ + + ++ LA PG ++ + +A + + A +M Sbjct: 261 SRAGFMVTMIGLLVAVGVSGVFSILLDKSWVVLLLAWVPGSVEAMTAVALLLSMEPAFVM 320 Query: 319 AMQ 321 Sbjct: 321 INH 323 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 2/157 (1%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR--GITLQLPRSAFLAAQAI 60 L + L ++SLLL + +PA +L ++ F+ GI +QLP+ L A A+ Sbjct: 181 WLIFFTLALVSLLLGKASTLLGIPAPYMLAALLVTASFNSFSTGIEMQLPKWMVLFATAL 240 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 LG +I + + L + ++ LL + V + PG Sbjct: 241 LGILIGSRIADTTLREAIAYSRAGFMVTMIGLLVAVGVSGVFSILLDKSWVVLLLAWVPG 300 Query: 121 GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLV 157 AM A+A + V LR+L + ++ Sbjct: 301 SVEAMTAVALLLSMEPAFVMINHALRLLLLYSLPAML 337 >UniRef50_B1VGV1 Putative membrane protein n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VGV1_CORU7 Length = 333 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 75/306 (24%), Positives = 124/306 (40%), Gaps = 35/306 (11%) Query: 75 TTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGA 134 +A L+VTL+ A WLL R + + G TG + GGA+ MV +A+D A Sbjct: 13 GQVASYLAPAALSLVVTLVVCAFGAWLLHRVNGVDGATGLLATLAGGASGMVLIARDVRA 72 Query: 135 DIRLVAFMQYLRVLFVAGAAVLVTRM-----------------------------MLGDN 165 D++ V QYLR+ + + G Sbjct: 73 DVQFVTLTQYLRLTVIVFTLPGLVAWLSTYSDAPGPDSVGPGSAGEAAGAVDPSLWDGVA 132 Query: 166 AEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLIT- 224 A A + + V L + +L+ ++ L ++PS +++ M + + Sbjct: 133 AAAGSFWRTPWQGVLGALAVGLLVWLIVKATAPLFKIPSPYLIVSMAVVVAAIAAGVPQE 192 Query: 225 IELPEWL-LAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRF 283 LPE L + +AY IG + G K L + LP +L +F ++A W + Sbjct: 193 FVLPEGLAVNLAYAIIGVQAGGTLTKGALRQFSAALPMLLGVLFLMVASSLATGWFIAWA 252 Query: 284 MHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILL---TGPAIARFIS 340 D + AYLAT PGG+ V A S +D L+ +Q LR+ +L+ P + ++ Sbjct: 253 SDFDILDAYLATVPGGVYAVLAFAHDSGSDP-LVTVVQVLRVLLMLIAGAFAPTVIDWLR 311 Query: 341 TYAPKR 346 +P R Sbjct: 312 RTSPTR 317 Score = 54.0 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 8/188 (4%) Query: 2 PVLQWGMLCVLSLLLSIG----FLAVHLPAALLLGPMIAGIIFSMRGITLQLPRS---AF 54 P + LL+ + +P+ L+ M + G+ + A Sbjct: 142 PWQGVLGALAVGLLVWLIVKATAPLFKIPSPYLIVSMAVVVAAIAAGVPQEFVLPEGLAV 201 Query: 55 LAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGA 114 A AI+G LT L + P++L +L + + SS GW + S Sbjct: 202 NLAYAIIGVQAGGTLTKGALRQFSAALPMLLGVLFLMVASSLATGWFIAWASDFDILDAY 261 Query: 115 WGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIV 174 + PGG A++A A D G+D LV +Q LRVL + A ++ + + Sbjct: 262 LATVPGGVYAVLAFAHDSGSDP-LVTVVQVLRVLLMLIAGAFAPTVIDWLRRTSPTRRTG 320 Query: 175 WFPPVSIN 182 + + Sbjct: 321 SPSRDAAD 328 >UniRef50_C9YG31 Protein abrB n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YG31_9BURK Length = 334 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 82/222 (36%), Positives = 121/222 (54%), Gaps = 6/222 (2%) Query: 2 PVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAIL 61 P L L + S L S FL + +PA +LLG M+AG++ + + I +Q+P F Q+++ Sbjct: 10 PRLHGPALLLCSALASAAFLLMGVPAGMLLGCMLAGVLLATQDINVQVPAPLFAIGQSVI 69 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 C++A +L +L +A WP+ L I + +SA++G+ L+R LPG+T WG +PG Sbjct: 70 ACLMAHSLHFEVLQRVAGEWPLFLGIAFSVMAASALLGYWLMRSGLLPGSTAIWGLAPGA 129 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSI 181 A+AMV MA D+GAD RLVAFMQYLRV V A LV G + + Sbjct: 130 ASAMVLMAGDFGADTRLVAFMQYLRVALVTAIASLVAHFAAGASPGHAAAAWDVQLVHWL 189 Query: 182 NL------LLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVL 217 +L LT+ L + A +G L P G +LIPM+ + Sbjct: 190 HLQSPLHAGLTLTLVLAAAWLGRTLTFPGGPLLIPMVLALAM 231 Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 1/163 (0%) Query: 186 TILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGL 245 +L + +A L+ +P+G +L MLAG +L + Q I +++P L A+ I + Sbjct: 17 LLLCSALASAAFLLMGVPAGMLLGCMLAGVLL-ATQDINVQVPAPLFAIGQSVIACLMAH 75 Query: 246 GFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAV 305 ++L R P L F+++A A + + L R + TA +PG + + Sbjct: 76 SLHFEVLQRVAGEWPLFLGIAFSVMAASALLGYWLMRSGLLPGSTAIWGLAPGAASAMVL 135 Query: 306 IAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 +A AD L+ MQ LR+ + +A F + +P +A Sbjct: 136 MAGDFGADTRLVAFMQYLRVALVTAIASLVAHFAAGASPGHAA 178 >UniRef50_Q0RKZ8 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RKZ8_FRAAA Length = 620 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 66/233 (28%), Positives = 100/233 (42%), Gaps = 9/233 (3%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQ-LPRSAFLAAQAILGCM 64 W +L V LL V +PA L+ P++ G ++ G+ + LP +QA+LG + Sbjct: 71 WILLVVGCYLLGEMGEIVGVPAPQLVVPLLVGAFLALGGMVRRNLPAPTIRGSQAVLGVL 130 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + L S L ++ + A+ L T+ + L R S A G PGG+AA Sbjct: 131 MGSYLNISELRSVLGTALPLTAVTLATIALCLLAALLFTRTSRGSVTDAALGMMPGGSAA 190 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPV----- 179 +VA A++ AD RLVA QYLRV VA A V + G + + Sbjct: 191 IVACAEELRADSRLVALSQYLRVGLVAVTAPAVVAVSHGTVGRPRPGSFPAYAHLVDGSS 250 Query: 180 -SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWL 231 + L + ++ G L LP+ + P L G L +GQ +P L Sbjct: 251 QLLGLAFLPGVCLLGARAGRRLGLPAPAL--PGLCGPGLGAGQDDRHRVPGVL 301 Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 60/144 (41%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 +L ++ + G +G ++ +P+ +++P+L GA L G ++ LP + + +G Sbjct: 70 AWILLVVGCYLLGEMGEIVGVPAPQLVVPLLVGAFLALGGMVRRNLPAPTIRGSQAVLGV 129 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 +G + L L + A +A+C A TR A L PGG Sbjct: 130 LMGSYLNISELRSVLGTALPLTAVTLATIALCLLAALLFTRTSRGSVTDAALGMMPGGSA 189 Query: 302 TVAVIAAGSNADMALIMAMQTLRL 325 + A AD L+ Q LR+ Sbjct: 190 AIVACAEELRADSRLVALSQYLRV 213 >UniRef50_A8VW34 Beta-lactamase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW34_9BACI Length = 221 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 2/208 (0%) Query: 135 DIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAG 194 + L+ F +++ +LF + L + GD A A+ + I+ L I+ ++A Sbjct: 4 RLSLLCFKRFVLLLFCFLSPFLFLYLFSGDPAIAMERPSGSDDSTLIHGLWYIIPVILAF 63 Query: 195 TVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLR 254 LL P+G M+IP+L VL +++P+ L +A +A+G +G Q + + Sbjct: 64 RYASLL--PAGIMIIPLLITIVLTVSPASILDVPDPLFLLAQLAVGTSLGRSIAIQDVFQ 121 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADM 314 A R L+ + L+ ++D TA L+ +PGG+ + + A +AD Sbjct: 122 AGRYSLYYAGITVILILFSFASGYLLSVVTNLDLATAMLSAAPGGVIEMVLTADMVDADP 181 Query: 315 ALIMAMQTLRLFSILLTGPAIARFISTY 342 A++ A+Q R+ ILL P +++ Sbjct: 182 AVVTALQLTRILLILLFVPMGLKWLFVR 209 Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 1/139 (0%) Query: 25 LPAALLLGPMIAGIIFSMRGITL-QLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPI 83 LPA +++ P++ I+ ++ ++ +P FL AQ +G + +++ + Sbjct: 69 LPAGIMIIPLLITIVLTVSPASILDVPDPLFLLAQLAVGTSLGRSIAIQDVFQAGRYSLY 128 Query: 84 VLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQ 143 I ++ +L S G+LL ++L T ++PGG MV A AD +V +Q Sbjct: 129 YAGITVILILFSFASGYLLSVVTNLDLATAMLSAAPGGVIEMVLTADMVDADPAVVTALQ 188 Query: 144 YLRVLFVAGAAVLVTRMML 162 R+L + + + + Sbjct: 189 LTRILLILLFVPMGLKWLF 207 >UniRef50_Q1AVE7 Putative ammonia monooxygenase-like protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVE7_RUBXD Length = 345 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 117/340 (34%), Gaps = 5/340 (1%) Query: 1 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAG--IIFSMRGITLQLPRSAFLAAQ 58 M L LC + +HLPA +G M + M L P A Q Sbjct: 1 MSPLAAVSLCAAGAAGAAAARGLHLPAGGFIGAMAGVGMALGLMGFPDLGTPPVLGGALQ 60 Query: 59 AILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSS 118 ++G ++ + + + A + + L S + + + + T + ++ Sbjct: 61 CLVGVLVGLRMEREAVRSGARALLPAALLAALFLASGLLAAYAAAALTGIHLKTALFAAA 120 Query: 119 PGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPP 178 GG M + GA+ +VA + +R+L V AA L+ + A P Sbjct: 121 TGGLTEMATIGASQGANGPVVAAVHLVRLLLVIFAASLLVGRLRRKAPRAPAGREGSPEP 180 Query: 179 VSIN--LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAY 236 S + LP+G ++ ML + L Sbjct: 181 ASRARLAGIAAAGVAGGVLGLAATPLPAGGVVGSMLGAGAARLL-LPGAVPERGFQFAVQ 239 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 G +GLG ++ + LL +A + L R +D TA A++ Sbjct: 240 ALAGGVVGLGLSEEFFRTLHQLAGAALLINAVQVAAWLAAFYLLVRAFGLDAATAAFASA 299 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 PGG+ T I + AD+ + + R+ + ++ P IA Sbjct: 300 PGGMGTTLSIIGETRADLVAVAFVHLFRVSATVVAIPLIA 339 Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 59/172 (34%), Gaps = 1/172 (0%) Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPML-AGAVLQSGQLITIELPEWLLAMAY 236 + + L LP+G + M G L + P L Sbjct: 1 MSPLAAVSLCAAGAAGAAAARGLHLPAGGFIGAMAGVGMALGLMGFPDLGTPPVLGGALQ 60 Query: 237 MAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATS 296 +G +GL +++ + R L L LA A+ I TA A + Sbjct: 61 CLVGVLVGLRMEREAVRSGARALLPAALLAALFLASGLLAAYAAAALTGIHLKTALFAAA 120 Query: 297 PGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA 348 GGL +A I A A+ ++ A+ +RL ++ + + AP+ A Sbjct: 121 TGGLTEMATIGASQGANGPVVAAVHLVRLLLVIFAASLLVGRLRRKAPRAPA 172 Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 56/135 (41%) Query: 25 LPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIV 84 LPA ++G M+ + R A QA+ G ++ L+ TL Sbjct: 206 LPAGGVVGSMLGAGAARLLLPGAVPERGFQFAVQALAGGVVGLGLSEEFFRTLHQLAGAA 265 Query: 85 LAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQY 144 L I V + + +LLVR L T A+ S+PGG +++ + AD+ VAF+ Sbjct: 266 LLINAVQVAAWLAAFYLLVRAFGLDAATAAFASAPGGMGTTLSIIGETRADLVAVAFVHL 325 Query: 145 LRVLFVAGAAVLVTR 159 RV A L+ Sbjct: 326 FRVSATVVAIPLIAA 340 >UniRef50_UPI0001C3846E membrane protein AbrB duplication n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C3846E Length = 207 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 1/161 (0%) Query: 7 GMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSM-RGITLQLPRSAFLAAQAILGCMI 65 + ++++ ++++P LLGPMI GI+ ++ + LP+S L QAI+ Sbjct: 40 LIQMTIAIMAGWLLTSLNMPVGWLLGPMIVGILLALIWQKSTPLPKSFNLLGQAIVALTT 99 Query: 66 AQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAM 125 A + LT +L ++VT S G+LL R++ + TG G PG ++ Sbjct: 100 ATRFSPETLTLGKTYALPLLGCIVVTGAMSVCNGYLLWRWAKIDRTTGFLGCIPGAGPSL 159 Query: 126 VAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNA 166 VA+++ GAD VA +QY+R+L VA + Sbjct: 160 VAISEQMGADAIAVAVLQYIRILLVALIIPTLASFWFASPG 200 Score = 87.6 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 66/157 (42%) Query: 183 LLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWR 242 +L+ + +A++AG + L +P G +L PM+ G +L + LP+ + + Sbjct: 39 ILIQMTIAIMAGWLLTSLNMPVGWLLGPMIVGILLALIWQKSTPLPKSFNLLGQAIVALT 98 Query: 243 IGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDT 302 F + L +L I A+ + L R+ ID T +L PG + Sbjct: 99 TATRFSPETLTLGKTYALPLLGCIVVTGAMSVCNGYLLWRWAKIDRTTGFLGCIPGAGPS 158 Query: 303 VAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFI 339 + I+ AD + +Q +R+ + L P +A F Sbjct: 159 LVAISEQMGADAIAVAVLQYIRILLVALIIPTLASFW 195 >UniRef50_A5L0B9 Ammonia monooxygenase n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L0B9_9GAMM Length = 243 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 100/243 (41%), Gaps = 8/243 (3%) Query: 11 VLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLT 70 ++L+ S+ F +P + G +IA ++ + G TL LP+S Q ILG + + Sbjct: 6 FIALVGSLLFTYFEIPLGAMFGALIALLVTAKAGFTLALPKSTLTGVQLILGATVGSIVP 65 Query: 71 GSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQ 130 L+ + + ++L L + G+ PG AA++ + + Sbjct: 66 VQTLSKGYP-ILLFVGLVLCMSALVLTSYLWLSKREKWSKYESLLGAVPGAMAAVLVINE 124 Query: 131 DYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLA 190 ++ + V F +R++F+ A+ L+ + ++ +LL + LA Sbjct: 125 NHNSPSSKVIFTHTVRLIFLIIASALLVST------DNSPVSGPAISLDNLWILLPLFLA 178 Query: 191 VVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQL-ITIELPEWLLAMAYMAIGWRIGLGFDK 249 +G + + P+ M+ MLA + S +P L+ +A A+G IG+ Sbjct: 179 YFSGLLLDKIGTPAPYMVTGMLATMFVNSELPSYNFLVPTELVFIATSALGALIGIRLKD 238 Query: 250 QIL 252 ++ Sbjct: 239 RLF 241 Score = 54.0 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 2/152 (1%) Query: 185 LTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIG 244 L +A+V + +P G M ++A V T+ LP+ L + +G +G Sbjct: 3 LASFIALVGSLLFTYFEIPLGAMFGALIALLVTAKAGF-TLALPKSTLTGVQLILGATVG 61 Query: 245 LGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVA 304 Q L + L + + + A+ L++ + L PG + V Sbjct: 62 SIVPVQTLSKGYPILL-FVGLVLCMSALVLTSYLWLSKREKWSKYESLLGAVPGAMAAVL 120 Query: 305 VIAAGSNADMALIMAMQTLRLFSILLTGPAIA 336 VI N+ + ++ T+RL +++ + Sbjct: 121 VINENHNSPSSKVIFTHTVRLIFLIIASALLV 152 >UniRef50_Q2JIQ1 Putative membrane protein n=2 Tax=Synechococcus RepID=Q2JIQ1_SYNJB Length = 166 Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 1/147 (0%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMA-YMAI 239 ++ L T+L+ + +G LRLP+G ++ M+A ++ I I P + A + + Sbjct: 1 MSYLWTVLIGLAGALIGVKLRLPAGALVGSMVAVGLVNVWGAIPIPAPPAGIRFAMQVVL 60 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G +G LL LL ++ + ++R++ I+ +TA L T+PGG Sbjct: 61 GILLGTKLTADTLLALKDLWRPALLCTVIAVSTGVLSGYLISRWLGIERLTAILGTAPGG 120 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLF 326 + +++IA A + ++ M RL Sbjct: 121 ISDMSLIALDMGAQTSTVVVMHLARLI 147 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 2/147 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITL--QLPRSAFLAAQAIL 61 + + ++ L ++ + + LPA L+G M+A + ++ G P A Q +L Sbjct: 1 MSYLWTVLIGLAGALIGVKLRLPAGALVGSMVAVGLVNVWGAIPIPAPPAGIRFAMQVVL 60 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G ++ LT L L W L ++ + + + G+L+ R+ + T G++PGG Sbjct: 61 GILLGTKLTADTLLALKDLWRPALLCTVIAVSTGVLSGYLISRWLGIERLTAILGTAPGG 120 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVL 148 + M +A D GA V M R++ Sbjct: 121 ISDMSLIALDMGAQTSTVVVMHLARLI 147 >UniRef50_C1XST2 Membrane protein AbrB duplication n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XST2_9DEIN Length = 162 Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 68/146 (46%) Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 L + G V L LP G ++ M+ A Q + P + + +A Sbjct: 1 MGAFFTASLCGIALGLVFWRLGLPGGPVVGTMIGTAAYQLFTPVKAITPNGMDLLVQLAA 60 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G IGL F++++L A + LP + + AL+ + AG+AW L R+ I +TA +PGG Sbjct: 61 GILIGLSFNRELLHIAQQALPWAVGAALALIGLGAGLAWILDRYTGIGLVTALFGLAPGG 120 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRL 325 + + V+A AL+ T+R+ Sbjct: 121 VTGMGVLAQAEGGKPALVGVFHTVRI 146 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 1/138 (0%) Query: 11 VLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMR-GITLQLPRSAFLAAQAILGCMIAQNL 69 + + L + F + LP ++G MI + + + P L Q G +I + Sbjct: 9 LCGIALGLVFWRLGLPGGPVVGTMIGTAAYQLFTPVKAITPNGMDLLVQLAAGILIGLSF 68 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 +L P + L + A + W+L RY+ + T +G +PGG M +A Sbjct: 69 NRELLHIAQQALPWAVGAALALIGLGAGLAWILDRYTGIGLVTALFGLAPGGVTGMGVLA 128 Query: 130 QDYGADIRLVAFMQYLRV 147 Q G LV +R+ Sbjct: 129 QAEGGKPALVGVFHTVRI 146 >UniRef50_C1TRS0 Membrane protein AbrB duplication n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRS0_9BACT Length = 162 Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 77/160 (48%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 ++ + + G +G L R+PSG M+ M+AG ++ +E WL A++ + + Sbjct: 3 HVFMVWGAVALGGLIGHLCRMPSGIMVGGMIAGLAVKIAFAPDMESSRWLSAISQLLVAG 62 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 I D + +P + +L +A L+RF +D +T+ A+SPGGL Sbjct: 63 AIVFNSDVSSVKSLPGMIPVAMGYSVVMLGFGVLVALALSRFFGMDILTSLFASSPGGLS 122 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIST 341 + + A S+A+ L + R+ +L+ P +AR++S Sbjct: 123 GLGLAATESDANAPLALLFHVSRITLVLMVVPLLARYLSR 162 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 1/157 (0%) Query: 8 MLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGCMIA 66 M+ L + +P+ +++G MIAG+ + ++ R +Q ++ I Sbjct: 6 MVWGAVALGGLIGHLCRMPSGIMVGGMIAGLAVKIAFAPDMESSRWLSAISQLLVAGAIV 65 Query: 67 QNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMV 126 N S + +L P+ + +V L +V L R+ + T + SSPGG + + Sbjct: 66 FNSDVSSVKSLPGMIPVAMGYSVVMLGFGVLVALALSRFFGMDILTSLFASSPGGLSGLG 125 Query: 127 AMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLG 163 A + A+ L R+ V L+ R + Sbjct: 126 LAATESDANAPLALLFHVSRITLVLMVVPLLARYLSR 162 >UniRef50_B6WW29 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WW29_9DELT Length = 167 Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 65/149 (43%) Query: 180 SINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAI 239 LL I + G + L +P G ML ++A ++ + + P A +AI Sbjct: 1 MTTFLLLIACGIAGGLLFFFLHIPGGAMLGAVVAVLAVKMLGHVEADTPRLFQLGAQIAI 60 Query: 240 GWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGG 299 G +G LL P + S L+ A AW + R +D +A LATSPGG Sbjct: 61 GVMVGNMMTGGTLLEIRAMAPLMFGSTALLIVAGALGAWFICRSAGLDAGSAILATSPGG 120 Query: 300 LDTVAVIAAGSNADMALIMAMQTLRLFSI 328 L V +A+ + ++A +RL+++ Sbjct: 121 LQAVVGMASDLGTNAPAVLAFHLVRLYTV 149 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 1/164 (0%) Query: 6 WGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRG-ITLQLPRSAFLAAQAILGCM 64 + +L + + F +H+P +LG ++A + M G + PR L AQ +G M Sbjct: 4 FLLLIACGIAGGLLFFFLHIPGGAMLGAVVAVLAVKMLGHVEADTPRLFQLGAQIAIGVM 63 Query: 65 IAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAA 124 + +TG L + P++ + +++ A+ W + R + L + +SPGG A Sbjct: 64 VGNMMTGGTLLEIRAMAPLMFGSTALLIVAGALGAWFICRSAGLDAGSAILATSPGGLQA 123 Query: 125 MVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEA 168 +V MA D G + V +R+ V A L++ ++ + Sbjct: 124 VVGMASDLGTNAPAVLAFHLVRLYTVLLLAPLLSWLLHRLLPHS 167 >UniRef50_A8VW33 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW33_9BACI Length = 166 Score = 74.5 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 1/150 (0%) Query: 3 VLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGI-IFSMRGITLQLPRSAFLAAQAIL 61 V M +L + F + LP +LGP+ A + + ++ G TL A IL Sbjct: 6 VRSLLMTLATALTGAALFSLLSLPLPWMLGPLTAVMTLQAVIGQTLYWHPMIKNAGLIIL 65 Query: 62 GCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGG 121 G T + +PI +A+ V + S + + L + + + +GS PGG Sbjct: 66 GISFGLYFTIDTIVMTLPYFPIYIAMTFVLIAISVSLSYALTKLIPIDPASSIFGSIPGG 125 Query: 122 AAAMVAMAQDYGADIRLVAFMQYLRVLFVA 151 MV +Q + A+ V Q +R++ V Sbjct: 126 LTEMVITSQSFHANQAFVTVFQTIRLVIVL 155 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 71/148 (47%) Query: 182 NLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGW 241 +LL+T+ A+ + LL LP ML P+ A LQ+ T+ + + +G Sbjct: 8 SLLMTLATALTGAALFSLLSLPLPWMLGPLTAVMTLQAVIGQTLYWHPMIKNAGLIILGI 67 Query: 242 RIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLD 301 GL F ++ L P + F L+AI +++ LT+ + ID ++ + PGGL Sbjct: 68 SFGLYFTIDTIVMTLPYFPIYIAMTFVLIAISVSLSYALTKLIPIDPASSIFGSIPGGLT 127 Query: 302 TVAVIAAGSNADMALIMAMQTLRLFSIL 329 + + + +A+ A + QT+RL +L Sbjct: 128 EMVITSQSFHANQAFVTVFQTIRLVIVL 155 >UniRef50_UPI000186D3F5 sodium antiporter, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D3F5 Length = 670 Score = 74.5 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 59/156 (37%), Gaps = 14/156 (8%) Query: 143 QYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRL 202 + R+L + L+ ++ L L + A + G +L L Sbjct: 159 HFARLLALVLVGFLLWGIVYCILGSTAAPGGQ-----LFGLALLCICANIGGWFATVLTL 213 Query: 203 PSGTMLIPMLAGAVLQSGQLITI-----ELPEWLLAMAYMAIGWRIGLGFDKQILLRALR 257 P+ ++ + G + Q+ L+ I E+ L +A + I R GL D + L R Sbjct: 214 PA--LVGMLAVGVLFQNVGLVHISEEYKEVCSILRKIALVIILIRAGLDLDPKALKRL-- 269 Query: 258 PLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 L I L + + CA +A M + ++ +L Sbjct: 270 ALSTIKLGLVPWIVECAIIATMTYFLMGLPWIWGFL 305 >UniRef50_B7A529 Membrane protein AbrB duplication n=3 Tax=Thermus RepID=B7A529_THEAQ Length = 157 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 3/160 (1%) Query: 181 INLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG 240 ++LL L V G + L LP G ++ ML L +P+ L +A G Sbjct: 1 MDLLRASLSGVFLGLLFYRLGLPGGAVVGAMLGTG-LHQLLASPAPIPKGLDLAVQLAAG 59 Query: 241 WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL 300 +GL F K++L + LP LLS A LA+ +A+ L + + A +PGG+ Sbjct: 60 VLVGLSFRKELLS--PKLLPYALLSALAFLALALLLAFLLAKPLGRPPQALLFALAPGGI 117 Query: 301 DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFIS 340 + ++ AL+ T+R+ ++ L P +AR + Sbjct: 118 TGMGPLSQAEGGSPALVGVFHTVRVLALFLLVPFLARLLR 157 Score = 61.0 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 62/158 (39%), Gaps = 2/158 (1%) Query: 4 LQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGC 63 + + + L + F + LP ++G M+ + + +P+ LA Q G Sbjct: 1 MDLLRASLSGVFLGLLFYRLGLPGGAVVGAMLGTGLHQLLASPAPIPKGLDLAVQLAAGV 60 Query: 64 MIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAA 123 ++ + +L+ P L L L + ++ +LL + P + +PGG Sbjct: 61 LVGLSFRKELLS--PKLLPYALLSALAFLALALLLAFLLAKPLGRPPQALLFALAPGGIT 118 Query: 124 AMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMM 161 M ++Q G LV +RVL + + R++ Sbjct: 119 GMGPLSQAEGGSPALVGVFHTVRVLALFLLVPFLARLL 156 >UniRef50_A5GHQ3 Uncharacterized AbrB family conserved membrane protein n=29 Tax=cellular organisms RepID=A5GHQ3_SYNPW Length = 172 Score = 61.0 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 2/132 (1%) Query: 12 LSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT--LQLPRSAFLAAQAILGCMIAQNL 69 + + L LPAA L G +I + SM G + P A Q +G +I L Sbjct: 14 AGTVFGLLALKTGLPAAPLAGALIGAAVVSMSGRVEVAEWPSGTRTALQIGIGTVIGTGL 73 Query: 70 TGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMA 129 T + L L W + I + +L+ +G R + G++PGG + M + Sbjct: 74 TRASLDQLQNLWRPAVLITVTLVLTGIAIGLWTSRLLGVDPLITLLGAAPGGISGMSLVG 133 Query: 130 QDYGADIRLVAF 141 DYG + A Sbjct: 134 ADYGVGAAVAAL 145 Score = 57.9 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 1/133 (0%) Query: 189 LAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQ-LITIELPEWLLAMAYMAIGWRIGLGF 247 V G + LP+ + ++ AV+ + E P + IG IG G Sbjct: 14 AGTVFGLLALKTGLPAAPLAGALIGAAVVSMSGRVEVAEWPSGTRTALQIGIGTVIGTGL 73 Query: 248 DKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307 + L + +L L+ + +R + +D + L +PGG+ ++++ Sbjct: 74 TRASLDQLQNLWRPAVLITVTLVLTGIAIGLWTSRLLGVDPLITLLGAAPGGISGMSLVG 133 Query: 308 AGSNADMALIMAM 320 A A+ Sbjct: 134 ADYGVGAAVAALH 146 >UniRef50_Q9VM74 Nha1, isoform A n=20 Tax=Neoptera RepID=Q9VM74_DROME Length = 715 Score = 50.6 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 14/159 (8%) Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCL 199 F R++ + VL+ ++ L++ + A G + L Sbjct: 218 TFRTVSRLISIILIGVLIWVTAFVIIGDSAAPGGQ-----LFGLVVLTVAANFGGYLISL 272 Query: 200 LRLPSGTMLIPMLAGAVLQSGQLITIE-----LPEWLLAMAYMAIGWRIGLGFDKQILLR 254 LP ++ +L G + Q+ I+ + L A I R GL + + + Sbjct: 273 TTLP--RLIGMLLVGILFQNVGWADIDGDFSKVTAHLRKFALTIILTRAGLEMEPEAFKK 330 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 + + + L I MA + + ++ A+L Sbjct: 331 VYKTILK--LGIIPWCVEAVVMAVMSHFLLDLPWIWAFL 367 >UniRef50_Q0RKZ7 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RKZ7_FRAAA Length = 79 Score = 48.3 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 36/60 (60%) Query: 283 FMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTY 342 + I F+ +YLAT+PGG++ V A ++ D+ ++ +Q+ RL ++L P + R++ Sbjct: 1 MIGIAFLESYLATTPGGINAVLATATVAHVDVGVVSTVQSFRLVLVVLLTPPLVRWLLRR 60 >UniRef50_Q95U27 GH12682p n=3 Tax=Sophophora RepID=Q95U27_DROME Length = 550 Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 14/159 (8%) Query: 140 AFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCL 199 F R++ + VL+ ++ L++ + A G + L Sbjct: 53 TFRTVSRLISIILIGVLIWVTAFVIIGDSAAPGGQ-----LFGLVVLTVAANFGGYLISL 107 Query: 200 LRLPSGTMLIPMLAGAVLQSGQLITIE-----LPEWLLAMAYMAIGWRIGLGFDKQILLR 254 LP ++ +L G + Q+ I+ + L A I R GL + + + Sbjct: 108 TTLP--RLIGMLLVGILFQNVGWADIDGDFSKVTAHLRKFALTIILTRAGLEMEPEAFKK 165 Query: 255 ALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYL 293 + + + L I MA + + ++ A+L Sbjct: 166 VYKTILK--LGIIPWCVEAVVMAVMSHFLLDLPWIWAFL 202 >UniRef50_A8PNS2 Na+/H+ antiporter n=1 Tax=Rickettsiella grylli RepID=A8PNS2_9COXI Length = 725 Score = 40.6 bits (94), Expect = 0.081, Method: Composition-based stats. Identities = 30/247 (12%), Positives = 79/247 (31%), Gaps = 22/247 (8%) Query: 5 QWGMLCVLSLLLSIGFLAVHLP--AALLLGPMIAG--IIFSMRGITLQLPRSAFLAAQAI 60 ++ ++ L+++ F + P LL MI G I + R+ Sbjct: 10 DLAVILGVASLVTLLFQKIRQPVVLGYLLSGMIVGPHIPPYDLVADVPSLRTLSELGVIF 69 Query: 61 LGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG 120 L + + + L + + + ++ ++G+LL ++ P + + Sbjct: 70 LMFSLGLDFSFHKLKRVGT---PAIITGIFEVVIVLLIGFLLGKFLGWPIYDCIFLGAAL 126 Query: 121 GAAAMVAM---AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFP 177 ++ + ++ G + + ++F + ++L V Sbjct: 127 SISSTTIIIKAMEELGLKSK-----HFAELIFGVLIVEDLLAILLLAGLSIVVGTHAVIS 181 Query: 178 PVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYM 237 + + + + V + + G LIP L ++ T+ + L + + Sbjct: 182 TTLADSAIKLFIVVGSWFL-------IGYFLIPTLIRKLVNIANQETLTIVSVALCLILV 234 Query: 238 AIGWRIG 244 I G Sbjct: 235 CIAAYFG 241 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.319 0.160 0.419 Lambda K H 0.267 0.0489 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,973,531,770 Number of Sequences: 3077464 Number of extensions: 80345840 Number of successful extensions: 796859 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 444 Number of HSP's successfully gapped in prelim test: 22332 Number of HSP's that attempted gapping in prelim test: 748583 Number of HSP's gapped (non-prelim): 57624 length of query: 348 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 219 effective length of database: 643,403,500 effective search space: 140905366500 effective search space used: 140905366500 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 94 (40.6 bits)