 |
| Job Description | P10443 | | Confidence | 21.86% | Date | Thu Jan 5 11:32:19 GMT 2012 |
| Rank | 282 | Aligned Residues | 26 |
| % Identity | 19% | Template | c3bbnM_ |
| PDB info |
PDB header:ribosome | Chain: M: PDB Molecule:ribosomal protein s13; |
PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome.
|
| Resolution | 9.40 Å |
|
|   |   |
825 | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 |
| Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | N | D | D | G | E | I | V | Y | G | I | G | A | I | K | G | V | G | E | G | P | I | E | A | I | I |
| Query Conservation |   |
|   |   |   |
|   |
|
|   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |
|   |   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |
| Template Sequence |   |
I | P | N | H | K | R | V | E | Y | S | L | Q | Y | I | H | G | I | G | R | S | R | S | R | Q | I | L |
| Template Known Secondary structure |   |
|
|
| S | S | B | T | T | T | G | G | G | G | S | T | T |
|
| S | S | T | T | T | G | G | G |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|