19/01/2012 02:31:03 : INFO  : Run start: Thu Jan 19 02:31:02 GMT 2012
19/01/2012 02:31:08 : INFO  : Initialised job
19/01/2012 02:31:09 : INFO  : Renaming log file 'phyre2_20120119_023102.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/42a9ef31f28f7d5c/phyre_20120119_023102.log'
19/01/2012 02:31:12 : INFO  : Initialised job:
Sequence
>batch____
MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQ
ARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGL
MFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDH
VLTALTTPDWTPGR

19/01/2012 02:31:13 : INFO  : Checked sequence
19/01/2012 02:31:16 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 02:31:17 : INFO  : PSI-BLAST 3 iterations
19/01/2012 02:33:09 : INFO  : PSI-BLAST 5 iterations
19/01/2012 02:36:21 : INFO  : Finished PSI-BLAST
19/01/2012 02:36:23 : INFO  : Running Buildali to generate a3m file
19/01/2012 03:00:56 : INFO  : Converting to HMM
19/01/2012 03:01:01 : INFO  : Calibrating HMM
19/01/2012 03:01:12 : INFO  : Searching HMM database
19/01/2012 03:06:08 : INFO  : Finished buildali
19/01/2012 03:06:09 : INFO  : Predicting secondary structure
19/01/2012 03:06:17 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 03:06:18 : INFO  : Predicting Disordered regions
19/01/2012 03:06:24 : INFO  : Predicted Disorder (Disopred)
19/01/2012 03:06:26 : INFO  : Running memsat_svm check
19/01/2012 03:08:37 : INFO  : Running memsat_svm full
19/01/2012 03:10:27 : INFO  : Predicted Transmembrane (memsat_svm) ID '42a9ef31f28f7d5c'
19/01/2012 03:10:28 : INFO  : Initialising fold library search
19/01/2012 03:10:32 : INFO  : Initialised search input
19/01/2012 03:10:34 : INFO  : Building Ensemble models
19/01/2012 03:10:37 : INFO  : Building hh.c3igrA_.model.1.pdb
19/01/2012 03:10:51 : INFO  : Building c3igrA_.1.pdb
19/01/2012 03:11:05 : INFO  : Building c3tcvB_.2.pdb
19/01/2012 03:11:18 : INFO  : Building d2fcka1.3.pdb
19/01/2012 03:11:31 : INFO  : Building c2vzzA_.4.pdb
19/01/2012 03:11:45 : INFO  : Building c3pzjB_.5.pdb
19/01/2012 03:11:58 : INFO  : Building d1yrea1.6.pdb
19/01/2012 03:12:11 : INFO  : Building c2zxvD_.7.pdb
19/01/2012 03:12:24 : INFO  : Building c3fbuB_.8.pdb
19/01/2012 03:12:38 : INFO  : Building c2zw7A_.9.pdb
19/01/2012 03:12:51 : INFO  : Building d1nsla_.10.pdb
19/01/2012 03:13:03 : INFO  : Building c3r95A_.11.pdb
19/01/2012 03:13:14 : INFO  : Building c3eg7F_.12.pdb
19/01/2012 03:13:26 : INFO  : Building c3owcA_.13.pdb
19/01/2012 03:13:37 : INFO  : Building c1s7fA_.14.pdb
19/01/2012 03:13:48 : INFO  : Building c2vi7C_.15.pdb
19/01/2012 03:14:00 : INFO  : Building d1s7ka1.16.pdb
19/01/2012 03:14:11 : INFO  : Building c2i79B_.17.pdb
19/01/2012 03:14:23 : INFO  : Building d2ge3a1.18.pdb
19/01/2012 03:14:37 : INFO  : Building c2fsrA_.19.pdb
19/01/2012 03:14:49 : INFO  : Building d2fsra1.20.pdb
19/01/2012 03:15:13 : INFO  : Finished HH model building
19/01/2012 03:15:14 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 03:15:58 : INFO  : html domain output complete ID '42a9ef31f28f7d5c'
19/01/2012 04:03:59 : INFO  : Run end  : Thu Jan 19 04:03:57 GMT 2012
