17 c1gm5A_ Probab=100.00  E-value=0  Score=362.41  Aligned_columns=331  Identities=20%

Q ss_pred             CHHHHHHHHHCCCCCCCHHHHHHHHHHHCC------CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHH
Q ss_conf             889999999877998898999999999769------98999928987468999999999985167882899993708999
Q batch____        14 KAPILEALNDLGYEKPSPIQAECIPHLLNG------RDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELA   87 (629)
Q Consensus        14 ~~~~~~~l~~~g~~~~~~~Q~~~i~~il~g------~~~l~~a~TGsGKT~~~~l~~l~~l~~~~~~~~~lii~Pt~~La   87 (629)
                      ...+.+.++.++|+ ||+.|++||..|..+      .++|++++||||||++|+++++..+..   |.+++||+||++||
T Consensus       349 ~~~~~~f~~~lpF~-LT~~Q~~ai~eI~~dl~~~~~m~rLLqgdtGSGKT~Va~lail~ai~~---G~qvlilaPTr~LA  424 (729)
T c1gm5A_         349 GKLAEEFIKSLPFK-LTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEA---GFQTAFMVPTSILA  424 (729)
T ss_dssp             THHHHHHHHHSSSC-CCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHH---TSCEEEECSCHHHH
T ss_pred             HHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHC---CCEEEEEECCHHHH
T ss_conf             06899899857899-898999999999998635897306775047872158999999999965---98099990769999


Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHC----CCCEEEECHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHH
Q ss_conf             9999999998401799779999788998999998525----898999988999868861775600055111114467755
Q batch____        88 VQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQ----GPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR  163 (629)
Q Consensus        88 ~Q~~~~l~~l~~~~~~i~v~~~~g~~~~~~~~~~l~~----~~~i~v~Tp~~l~~~~~~~~~~~~~~~~~v~de~d~~~~  163 (629)
                      .|++..+++++... +++|..++|+.+..++...+..    .++|+|+||+.|.+.+     .+.++.++|+||+|++..
T Consensus       425 ~Q~~~~l~~~~~~~-gi~V~lltG~~~~~~r~~~~~~i~~g~~~IvVgT~~lL~~~v-----~~~~l~lvVIDEaHrf~~  498 (729)
T c1gm5A_         425 IQHYRRTVESFSKF-NIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDV-----HFKNLGLVIIDEQHRFEA  498 (729)
T ss_dssp             HHHHHHHHHHHTCS-SCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHCC-----CCSCCCEEEEESCCCCCC
T ss_pred             HHHHHHHHHHHCCC-CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHC-----CCCCCCEEECCCHHHHHH
T ss_conf             99999999960415-974999988998889999998650379748985177887301-----411366786061688899


Q ss_pred             HHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
Q ss_conf             21148999999740434550110035884699999984789449950567877662278630388678899999998723
Q batch____       164 MGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAE  243 (629)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~i~~~~~~~~~~~k~~~l~~~l~~~  243 (629)
                                +.......++++++||..+  ..+......+...+...........+...........+.-..... ...
T Consensus       499 ----------l~~~~~~~~iL~lSATPip--rtla~~~~g~~~~s~i~e~p~~r~~i~t~v~~~~~~~~l~~~I~~-~l~  565 (729)
T c1gm5A_         499 ----------LMNKGKMVDTLVMSATPIP--RSMALAFYGDLDVTVIDEMPPGRKEVQTMLVPMDRVNEVYEFVRQ-EVM  565 (729)
T ss_dssp             ----------CCSSSSCCCEEEEESSCCC--HHHHHHHTCCSSCEEECCCCSSCCCCEECCCCSSTHHHHHHHHHH-HTT
T ss_pred             ----------HHHCCCCCCEEEEECCCCH--HHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHH-HHH
T ss_conf             ----------9863998869999458998--999999728963699720588777726999722217999999999-854


Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCEEEEECCC
Q ss_conf             89719994497999999999874329630210279899999999998617980155430165530478984479980888
Q batch____       244 DFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIP  323 (629)
Q Consensus       244 ~~~~~iif~~t~~~~~~~~~~L~~~~~~~~~~h~~~~~~~R~~~~~~f~~g~~~vLvaT~~l~~GiDip~v~~VI~~~~p  323 (629)
                      .+.++||||+++..++.++..|...++.+..+||+|++.+|..+++.|++|+++|||||+++++|||+|++++||++++|
T Consensus       566 ~g~qvLVF~~ti~~ae~la~~L~~~g~~v~~lHG~ls~~eR~~il~~Fr~Gei~VLVATtvie~GIDvPnvt~vVi~~a~  645 (729)
T c1gm5A_         566 RGGQAFIVYPLIKSAVEMYEYLSKEVFKLGLMHGRLSQEEKDRVMLEFAEGRYDILVSTTVIEVGIDVPRANVMVIENPE  645 (729)
T ss_dssp             TSCCBCCBCCCCCHHHHHHHSGGGSCCCBCCCCSSSCCSCSHHHHHHHTTTSSSBCCCSSCCCSCSCCTTCCEEEBCSCS
T ss_pred             CCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCCEEEEECCC
T ss_conf             69938999489899999999998539978999689998999999999976999899992275503787866479985787


Q ss_pred             C-CHHHHEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCC
Q ss_conf             8-9878200454336688875079996805589999999971896
Q batch____       324 M-DSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLT  367 (629)
Q Consensus       324 ~-~~~~y~~r~GR~gR~g~~g~~~~~~~~~~~~~~~~~~~~~~~~  367 (629)
                      . +...++|+.||+||.|+.|.|++++.+.+....+.+.-.....
T Consensus       646 rfglsqLhQlrGRvGR~~~~g~ciL~~~~~~~~a~~RL~~l~~~~  690 (729)
T c1gm5A_         646 RFGLAQLHQLRGRVGRGGQEAYCFLVVGDVGEEAMERLRFFTLNT  690 (729)
T ss_dssp             SSCTTHHHHHHHTSCCSSTTCEEECCCCSCCHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf             479978766530344579814999995699878999999998213