27 c1qapA_ Probab=99.84   E-value=3.4e-20  Score=144.61  Aligned_columns=203  Identities=17%

Q ss_pred             EEEEECCCCEEE----EEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf             799816996578----9999303534204423998864677531135568899999999989999875534212798225
Q batch____        97 QVTVSNDNGKLD----IRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSALTAGLDMSRFHLM  172 (400)
Q Consensus        97 ~~~v~~~~~~l~----i~I~gp~~~~~l~E~plL~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  172 (400)
                      .+.+++|+.+.+    ++|+||..+....|.++|++++                    ..+.+++++.++..++++.++.
T Consensus        81 ~~~~~dG~~v~~ge~il~i~G~~~~l~~~Er~~Ln~L~--------------------~~sgIAT~t~~~v~~a~~~~~~  140 (289)
T c1qapA_          81 TWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQ--------------------TLSGVASEVRRYVGLLAGTQTQ  140 (289)
T ss_dssp             EESCCTTCEECTTCEEEEEEEEHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHTTTTSSCE
T ss_pred             EEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHCCCCCEE
T ss_conf             99837898954898799998778999999999999998--------------------9889999999999961799779


Q ss_pred             EEHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf             32443148988899999988675064213468889860897102024899985201244555637999999999779987
Q batch____       173 DFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQAHEWFQAHQQISPDLANSQRAALAAWLEEYPDQL  252 (400)
Q Consensus       173 eFG~RRa~~~~a~~~~~~~aa~~ggf~gTSNv~aa~~~gi~~~GTmaHs~v~~~~~~~~~~~~se~~Af~~~~~~yp~~~  252 (400)
                      .||+|+.++.  ......+|...||+..+++.+...     +.+++.|  ++.++        +..+|++...+.+|+..
T Consensus       141 i~~TRKt~Pg--~r~~~~~Av~~GG~~~hR~~L~d~-----ilik~nH--i~~~g--------~~~~av~~~r~~~p~~~  203 (289)
T c1qapA_         141 LLDTRKTLPG--LRTALKYAVLCGGGANHRLGLTDA-----FLIKENH--IIASG--------SVRQAVEKAFWLHPDVP  203 (289)
T ss_dssp             EECCSCCCTT--CHHHHHHHHHHHTCBCCCSSSSSC-----EEECHHH--HHHHS--------SHHHHHHHHHHHSTTSC
T ss_pred             EEECCCCCHH--HHHHHHHHHHHCCCCCCHHHCCCC-----CCCCHHH--HHHCC--------CHHHHHHHHHHHCCCCE
T ss_conf             9854568943--899999998726952100001211-----1122035--66315--------18999999998589982


Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCC
Q ss_conf             99998676768868989999875420101378888999999999999779984425999758999999999998406677
Q batch____       253 GIALTDCITMDAFLRDFGVEFASRYQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRV  332 (400)
Q Consensus       253 ~~~L~Dt~~~~~~l~~~~~~~~~~~~GVR~DSGD~~~l~~~~r~~ld~~G~~~~~~~Ii~S~~Lde~~i~~l~~~~~~~~  332 (400)
                      ..+++||+      ..+........++||+|+++|..+ +++++..+      .+++|++|+|+|++.|.++.+.+.   
T Consensus       204 I~Vevdt~------eea~eA~~~gad~I~LD~~~~~~l-k~~v~~i~------~~v~I~aSGGI~~~ni~~~a~~Gv---  267 (289)
T c1qapA_         204 VEVEVENL------DELDDALKAGADIIMLDNFNTDQM-REAVKRVN------GQARLEVSGNVTAETLREFAETGV---  267 (289)
T ss_dssp             EEEEESSH------HHHHHHHHTTCSEEEESSCCHHHH-HHHHHTTC------TTCCEEECCCSCHHHHHHHHHTTC---
T ss_pred             EEEEECCH------HHHHHHHHCCCCEEEECCCCHHHH-HHHHHHHC------CCCEEEEECCCCHHHHHHHHHCCC---
T ss_conf             99996698------999999855998999869998999-99999628------874699988999899999995799---


Q ss_pred             CEEEEECCCEECCCCCCCCCCEEEE
Q ss_conf             1464223400048888887514888
Q batch____       333 QLSFGIGTRLTCDIPQVKPLNIVIK  357 (400)
Q Consensus       333 ~~~fGVGT~l~t~~~~~p~l~~VyK  357 (400)
                       |.++||. +++   +.|++++-+|
T Consensus       268 -D~i~vGs-lt~---sa~~~D~sl~  287 (289)
T c1qapA_         268 -DFISVGA-LTK---HVRALDLSMR  287 (289)
T ss_dssp             -SEEECSH-HHH---CCCCCCEEEE
T ss_pred             -CEEEECC-HHC---CCCEEEEEEE
T ss_conf             -8999822-211---8820205764