 |
| Job Description | P18133 | | Confidence | 21.70% | Date | Thu Jan 5 11:36:41 GMT 2012 |
| Rank | 86 | Aligned Residues | 52 |
| % Identity | 21% | Template | c1ojuA_ |
| PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:malate dehydrogenase; |
PDBTitle: 2.8 a resolution structure of malate dehydrogenase from2 archaeoglobus fulgidus in complex with etheno-nad.
|
| Resolution | 2.79 Å |
|
|   |   |
288 | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | E | W | G | E | K | A | I | A | H | Y | E | K | L | G | I | D | P | Q | S | K | T | L | V | F | S | D | N | L | D | L | R | K | A | V | E | L | Y | R | H | F | S | S | R | V | Q | L | S | F | G | I | G | T | R | L |
| Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |   |   | . | . |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|
| . |
|
|   |
|
|   |
|
| Template Sequence |   |
A | G | I | I | K | D | I | A | K | K | I | V | E | N | A | . |
. |
P | E | S | K | I | L | V | V | T | N | P | M | D | V | M | T | Y | I | M | W | K | E | S | G | K | P | R | N | E | V | . |
F | G | M | G | N | Q | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | S | . | . | T | T |
|  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| T | T | S |  | . |  |  |
| S |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |  |  |
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
. | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|