06/01/2012 04:20:22 : INFO  : Run start: Fri Jan  6 04:20:22 GMT 2012
06/01/2012 04:20:24 : INFO  : Initialised job
06/01/2012 04:20:25 : INFO  : Renaming log file 'phyre2_20120106_042021.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/426e913c043f0328/phyre_20120106_042021.log'
06/01/2012 04:20:25 : INFO  : Initialised job:
Sequence
>batch____
MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKL
TIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYS
TMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKGKT
EQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT
NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKF
PQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN

06/01/2012 04:20:26 : INFO  : Checked sequence
06/01/2012 04:20:27 : INFO  : Finding homologues with PSI-BLAST
06/01/2012 04:20:28 : INFO  : PSI-BLAST 3 iterations
06/01/2012 04:21:54 : INFO  : PSI-BLAST 5 iterations
06/01/2012 04:23:49 : INFO  : Finished PSI-BLAST
06/01/2012 04:23:49 : INFO  : Running Buildali to generate a3m file
06/01/2012 04:29:17 : INFO  : Converting to HMM
06/01/2012 04:29:20 : INFO  : Calibrating HMM
06/01/2012 04:29:31 : INFO  : Searching HMM database
06/01/2012 04:36:36 : INFO  : Finished buildali
06/01/2012 04:36:36 : INFO  : Predicting secondary structure
06/01/2012 04:36:40 : INFO  : Predicted secondary structure (PSI-Pred)
06/01/2012 04:36:40 : INFO  : Predicting Disordered regions
06/01/2012 04:36:42 : INFO  : Predicted Disorder (Disopred)
06/01/2012 04:36:43 : INFO  : Running memsat_svm check
06/01/2012 04:40:13 : INFO  : Running memsat_svm full
06/01/2012 04:44:29 : INFO  : Predicted Transmembrane (memsat_svm) ID '426e913c043f0328'
06/01/2012 04:44:29 : INFO  : Initialising fold library search
06/01/2012 04:44:31 : INFO  : Initialised search input
06/01/2012 04:44:32 : INFO  : Building Ensemble models
06/01/2012 04:44:34 : INFO  : Building hh.d1sbpa_.model.1.pdb
06/01/2012 04:44:42 : INFO  : Building d1sbpa_.1.pdb
06/01/2012 04:44:49 : INFO  : Building d1y9ua_.2.pdb
06/01/2012 04:44:56 : INFO  : Building c2h5yC_.3.pdb
06/01/2012 04:45:04 : INFO  : Building c3c9hB_.4.pdb
06/01/2012 04:45:12 : INFO  : Building d1atga_.5.pdb
06/01/2012 04:45:20 : INFO  : Building c3lr1A_.6.pdb
06/01/2012 04:45:29 : INFO  : Building c3fj7A_.7.pdb
06/01/2012 04:45:37 : INFO  : Building c2qryD_.8.pdb
06/01/2012 04:45:44 : INFO  : Building d1amfa_.9.pdb
06/01/2012 04:45:51 : INFO  : Building d1q35a_.10.pdb
06/01/2012 04:45:58 : INFO  : Building c3muqB_.11.pdb
06/01/2012 04:46:05 : INFO  : Building d1y4ta_.12.pdb
06/01/2012 04:46:13 : INFO  : Building c2pt1A_.13.pdb
06/01/2012 04:46:23 : INFO  : Building d1xvya_.14.pdb
06/01/2012 04:46:30 : INFO  : Building d1xc1a_.15.pdb
06/01/2012 04:46:38 : INFO  : Building d1xvxa_.16.pdb
06/01/2012 04:46:45 : INFO  : Building c3rpwA_.17.pdb
06/01/2012 04:46:53 : INFO  : Building d1nnfa_.18.pdb
06/01/2012 04:47:02 : INFO  : Building c3pu5A_.19.pdb
06/01/2012 04:47:10 : INFO  : Building c2vozA_.20.pdb
06/01/2012 04:47:30 : INFO  : Finished HH model building
06/01/2012 04:47:31 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
06/01/2012 04:48:16 : INFO  : html domain output complete ID '426e913c043f0328'
06/01/2012 08:02:13 : INFO  : Run end  : Fri Jan  6 08:02:12 GMT 2012
