41 c1tvmA_ Probab=71.72   E-value=7.2  Score=18.64  Aligned_columns=86  Identities=8%

Q ss_pred             EEEEECCCCHH-HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCC-HHHH
Q ss_conf             99996184156-799999999986398899997210212799976869983154013683122567766232376-8999
Q batch____        58 ISVMGHGMGIP-SCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIAD-FDMV  135 (239)
Q Consensus        58 v~i~~~GiG~~-~aa~~~~el~~~~g~~~iI~~GtaG~l~~~i~~GDvVi~~~~~~~d~~~~~~~~~~~~p~~~d-~~l~  135 (239)
                      +++|.+|+|.. -.+..+...+...+.+.-+.......+....+--|+++++.-+..+....+.....++...-+ ....
T Consensus        25 lVvC~sGigTS~ll~~kl~~~~~~~~i~~~i~~~~~~~~~~~~~~~D~iist~~i~~~~~~iPvi~v~pllt~~~~e~~~  104 (113)
T c1tvmA_          25 IVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQ  104 (113)
T ss_dssp             EEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTTTSTTSCSEEEESSCCCCCSTTCCEECCHHHHHSSSHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHH
T ss_conf             99838998899999999998625539559999853111000125514999830146432698679997336845989999


Q ss_pred             HHHHHHHH
Q ss_conf             99999987
Q batch____       136 RNAVDAAK  143 (239)
Q Consensus       136 ~~l~~~~~  143 (239)
                      +.+.+..+
T Consensus       105 ~kI~e~lk  112 (113)
T c1tvmA_         105 NKILTILQ  112 (113)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHC
T ss_conf             99999856