50 c3ma0A_ Probab=99.94   E-value=1.2e-22  Score=166.39  Aligned_columns=268  Identities=18%

Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH--
Q ss_conf             983799996788895799999999999986398699997789989999877763005654452067876402566642--
Q batch____        63 QSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHGGKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMA--  140 (342)
Q Consensus        63 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  140 (342)
                      +..+||++.+...++||..+.+++++++.+.|+.+.+.....+...+...+..+...++|++++.+............  
T Consensus         1 k~~~Igvi~~~~~~~f~~~~~~g~~~~a~~~G~~~~i~~~~~d~~~q~~~i~~li~~~vdgii~~~~~~~~~~~~~~~~~   80 (313)
T c3ma0A_           1 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAK   80 (313)
T ss_dssp             CCCEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEECCSSTTSCHHHHHHHH
T ss_pred             CCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
T ss_conf             94189999678999789999999999999869889999679998999999999996599788862112322114678863


Q ss_pred             CCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCC-EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf             02685499971357765655787446303578999987300353-03116854431489999999998742588767117
Q batch____       141 EEKAIPVIFASRASYLDDVDTVRPDNMQAAQLLTEHLIRNGHQR-IAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSDW  219 (342)
Q Consensus       141 ~~~~~~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~R~~g~~~~~~~~~~~~~~~~  219 (342)
                      ....+++.............++..++...+..+...+...++++ ..+............|..||.+++++++.......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~v~~d~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~g~~~~l~~~~~~~~~~~  160 (313)
T c3ma0A_          81 QEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV  160 (313)
T ss_dssp             HTTCEEEEESSCCCSSCCSEEEEECHHHHHHHHHHHHHHHCSSEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHTTSEEE
T ss_pred             HCCCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             05876068860355677623896465778999999999851269616120168871189999999999998298656346


Q ss_pred             EEECCCC----CHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCHHHH--
Q ss_conf             8735764----1478999999874159952899706652378999999703543355328989700699964671699--
Q batch____       220 VLECTSS----QKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDRYFEQQVSLAAFTDATPT--  293 (342)
Q Consensus       220 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~g~~~~l~~~g~~vP~disvig~d~~~~~--  293 (342)
                      .......    ...........+...+.+++++|.++..|.+++.++.++|+           |+|++|+|||+.+..  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~~D~~A~g~~~al~~~G~-----------~~~i~i~G~D~~~~~~~  229 (313)
T c3ma0A_         161 VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL-----------SGKVAISGQDADLAGIK  229 (313)
T ss_dssp             EEEEECGGGCHHHHHHHHHHHHHHTTTCCCEEEESSHHHHHHHHHHHHTTTC-----------TTTSEECCCSCCHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCC-----------CCCCEEEEECCCHHHHH
T ss_conf             5220047889899999999998603688858994350469999999998589-----------99833999779989999


Q ss_pred             HHCCCC-EEEEECCHHHHHHHHHHHHHHHHHCCCCCC-----------EEEEEEEEEEEE
Q ss_conf             623885-016754999999999999999980889997-----------389981289773
Q batch____       294 TLDDIP-VTWASTPARELGITLADRMMQKITHEETHS-----------RNLIIPARLIAA  341 (342)
Q Consensus       294 ~~~~p~-lttv~~~~~~~g~~Av~~L~~~i~~~~~~~-----------~~i~i~~~LI~R  341 (342)
                      ....+. ++||.||++++|+.|++++.++++|++++.           +.+++|+.+|.|
T Consensus       230 ~i~~g~~~~tv~q~~~~~g~~a~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~It~  289 (313)
T c3ma0A_         230 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK  289 (313)
T ss_dssp             HHHHTSSCEEEECCHHHHHHHHHHHHHHHHTTCCCCCSEEEECSSSEEEEEEECCEEEET
T ss_pred             HHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCEEECCCEEECH
T ss_conf             840798419995299999999999999998488999763004665447769837135447