280 c1tndA_ Probab=98.28   E-value=5.1e-06  Score=52.89  Aligned_columns=186  Identities=17%

Q ss_pred             EEEEEECCCCCCHHHHHHHH-HHHCCCCCCCHHHHHHHHHHH--------------------------------------
Q ss_conf             68999858888876778789-875387341002332111220--------------------------------------
Q batch____        28 LRFLTCGSVDDGKSTLIGRL-LHDTRQIYEDQLSSLHNDSKR--------------------------------------   68 (475)
Q Consensus        28 lni~iiGhvdaGKSTL~g~L-l~~~g~i~~~~~~~~~~~~~~--------------------------------------   68 (475)
                      ++|-++|.-+|||||++.++ +...+.........++..-..                                      
T Consensus         4 ikiLlLG~~eSGKST~~KQ~k~i~~~~f~~~E~~~~~~~I~~Nii~~~~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~   83 (323)
T c1tndA_           4 VKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMADT   83 (323)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTHHHHHHHHHHHTTT
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             89999738988888999999999678999899998799999999999999999998709998882136879998730134


Q ss_pred             ------------------------------------------CCCCCCCEEEEEEECCCHHHHHCCCEEEEEEEEEECCC
Q ss_conf             ------------------------------------------77111210123563477758534833777699995398
Q batch____        69 ------------------------------------------HGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEK  106 (475)
Q Consensus        69 ------------------------------------------~g~~~~~~~~~~~~D~~~~Er~rgiTi~~~~~~~~~~~  106 (475)
                                                                .-.......-.+.--..+.-+.|..|.-+....|...+
T Consensus        84 ~~~~~~~~e~~~~I~~LW~d~~iq~~~~r~~e~~l~d~~~YFl~~i~RI~~~~Y~Pt~~Dil~~r~~T~Gi~~~~f~~~~  163 (323)
T c1tndA_          84 IEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKD  163 (323)
T ss_dssp             SCTTCCCHHHHHHHHHHHHSHHHHHHHTTGGGSCCCTTHHHHHTTHHHHTSTTCCCCHHHHHHCCCCCCSEEEEEEEETT
T ss_pred             CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEECC
T ss_conf             56222598999999998569899999873541042222456676678741545477864458985350241799997357


Q ss_pred             EEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCC-----------CCCHHHHHHHHHH----HHCCCCEEEEEEECCC
Q ss_conf             077212367799999999998620887999997643-----------7862589999999----9729984999986156
Q batch____       107 RKFIIADTPGHEQYTRNMATGASTCELAILLIDARK-----------GVLDQTRRHSFIS----TLLGIKHLVVAINKMD  171 (475)
Q Consensus       107 ~~i~liD~pGH~~f~~~~i~g~~~~D~ailVVda~~-----------G~~~qt~ehl~l~----~~lgi~~iIvviNKiD  171 (475)
                      ..+.+.|+.|.+..-+.-..-...+++.++|||..+           .-+....+.+.-+    ...+.| ++++.||+|
T Consensus       164 ~~~~~~DvgGq~~~R~kW~~~f~~v~~iifvv~lsd~d~~~~e~~~~nrl~esl~~f~~i~~~~~~~~~~-iil~lNK~D  242 (323)
T c1tndA_         164 LNFRMFDVGGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTS-IVLFLNKKD  242 (323)
T ss_dssp             EEEEEEEECCSHHHHGGGGGGCTTCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTCSGGGSCE-EEEEEECHH
T ss_pred             EEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCC-EEEEECCHH
T ss_conf             0488997789874332368873699889999781141442225674035899999999982796877997-899932558


Q ss_pred             C-------------------CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH
Q ss_conf             8-------------------8889899999999999888726887871699820225887100
Q batch____       172 L-------------------VDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVAS  215 (475)
Q Consensus       172 ~-------------------v~~~~~r~~~i~~~~~~~l~~~~~~~~~~iipiSa~~G~ni~~  215 (475)
                      +                   .+...+....+.++...........+ +-+..++|....|+..
T Consensus       243 if~~Kl~~~~l~~~fp~y~g~~~~~~~~~~i~~~F~~~~~~~~~r~-~~~~~t~a~d~~~i~~  304 (323)
T c1tndA_         243 VFSEKIKKAHLSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKE-IYSHMTCATDTQNVKF  304 (323)
T ss_dssp             HHHHHHTTSCGGGTCTTCCSCCCHHHHHHHHHHHHHTTCTTBTTBC-CEEEEECTTCHHHHHH
T ss_pred             HHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE-EEEEEEEEEEHHHHHH
T ss_conf             9987604488344067889978989999999999998523778973-8999985110689999