BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (183 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 381 e-105 UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 339 2e-92 UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 320 1e-86 UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycet... 217 1e-55 UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C... 213 3e-54 UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regu... 208 9e-53 UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=... 207 1e-52 UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regu... 207 1e-52 UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma p... 204 1e-51 UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 203 3e-51 UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regul... 197 1e-49 UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 197 1e-49 UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 T... 197 1e-49 UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 196 3e-49 UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regu... 194 1e-48 UniRef50_A6T2C3 Negative regulator of beta-lactamase expression ... 192 5e-48 UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 190 2e-47 UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=... 187 2e-46 UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regu... 186 3e-46 UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regu... 186 4e-46 UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK... 184 9e-46 UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 183 3e-45 UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regu... 181 7e-45 UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_... 178 7e-44 UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4... 178 8e-44 UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkh... 177 2e-43 UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regu... 176 4e-43 UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 ... 173 3e-42 UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regu... 159 3e-38 UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amid... 131 9e-30 UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 122 6e-27 UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regu... 120 2e-26 UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodos... 98 1e-19 UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 94 2e-18 UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 94 3e-18 UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regu... 92 8e-18 UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regu... 90 3e-17 UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A... 88 2e-16 UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodoba... 87 2e-16 UniRef50_Q093H8 Negative regulator of beta-lactamase expression ... 87 2e-16 UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 ... 84 3e-15 UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regu... 83 4e-15 UniRef50_A8TR24 Negative regulator of beta-lactamase expression ... 83 5e-15 UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 83 5e-15 UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regu... 83 5e-15 UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR... 82 9e-15 UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regu... 82 1e-14 UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 81 1e-14 UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regu... 81 1e-14 UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protei... 81 2e-14 UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6... 81 2e-14 UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 ... 81 2e-14 UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax... 81 2e-14 UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 80 2e-14 UniRef50_C1QGN2 Negative regulator of beta-lactamase expression ... 80 2e-14 UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regu... 80 3e-14 UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphapr... 80 4e-14 UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_... 80 4e-14 UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regu... 79 5e-14 UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2... 79 8e-14 UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regu... 79 8e-14 UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 79 1e-13 UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Ta... 78 1e-13 UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 78 1e-13 UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 ... 78 1e-13 UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 ... 78 2e-13 UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 ... 77 2e-13 UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodo... 77 2e-13 UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regu... 77 2e-13 UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brach... 76 4e-13 UniRef50_Q65A81 N-acetyl-anhydromuramyl-L-alanine amidase n=1 Ta... 76 5e-13 UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 76 6e-13 UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candida... 76 6e-13 UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoar... 75 8e-13 UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regu... 75 9e-13 UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax... 74 2e-12 UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacte... 74 2e-12 UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aerom... 74 2e-12 UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5... 74 2e-12 UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphin... 74 3e-12 UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xant... 73 5e-12 UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacte... 73 5e-12 UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algor... 72 9e-12 UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protei... 72 1e-11 UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=... 71 2e-11 UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1... 71 2e-11 UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protei... 70 3e-11 UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regu... 69 5e-11 UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 69 5e-11 UniRef50_C4SAC3 Negative regulator of beta-lactamase expression ... 69 8e-11 UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negati... 69 8e-11 UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-... 69 8e-11 UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regu... 69 9e-11 UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 69 9e-11 UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protei... 69 9e-11 UniRef50_A4WS28 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 66 5e-10 UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regu... 66 5e-10 UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 66 7e-10 UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regu... 65 9e-10 UniRef50_B1ESE3 Regulates AmpC n=1 Tax=Escherichia albertii TW07... 65 9e-10 UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 65 1e-09 UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvu... 65 1e-09 UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regu... 64 2e-09 UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orien... 64 3e-09 UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-... 62 6e-09 UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regu... 61 1e-08 UniRef50_C0A8M7 Negative regulator of beta-lactamase expression-... 61 2e-08 UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regu... 61 2e-08 UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protei... 60 3e-08 UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 ... 59 6e-08 UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO 59 8e-08 UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regu... 58 1e-07 UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9... 58 1e-07 UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regu... 57 2e-07 UniRef50_A6GHP2 Putative amidase n=1 Tax=Plesiocystis pacifica S... 56 5e-07 UniRef50_A4NW45 N-acetyl-anhydromuranmyl-L-alanine amidase n=1 T... 55 1e-06 UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 54 2e-06 UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 54 3e-06 UniRef50_A9AXU4 N-acetylmuramyl-L-alanine amidase, negative regu... 54 3e-06 UniRef50_C4DNA4 Negative regulator of beta-lactamase expression ... 52 7e-06 UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regu... 52 9e-06 UniRef50_Q5Z3U1 Putative uncharacterized protein n=1 Tax=Nocardi... 52 1e-05 UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regu... 51 2e-05 UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 51 2e-05 UniRef50_A8LCD7 N-acetylmuramyl-L-alanine amidase, negative regu... 51 2e-05 UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regu... 49 6e-05 UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regu... 49 7e-05 UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regu... 49 8e-05 UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=A... 49 1e-04 UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces R... 47 2e-04 UniRef50_B1TGB7 N-acetylmuramyl-L-alanine amidase, negative regu... 47 2e-04 UniRef50_A8FVJ2 Negative regulator of beta-lactamase expression-... 47 2e-04 UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-... 47 3e-04 UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD... 47 4e-04 UniRef50_Q3AXW0 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 47 4e-04 UniRef50_UPI0001B539A2 amidase n=1 Tax=Streptomyces sp. AA4 RepI... 46 5e-04 UniRef50_Q8DLW7 Tlr0359 protein n=1 Tax=Thermosynechococcus elon... 46 6e-04 UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=... 45 8e-04 UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regu... 45 8e-04 UniRef50_D2Q0D6 N-acetylmuramyl-L-alanine amidase, negative regu... 45 0.001 UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=... 45 0.002 UniRef50_A8PNB6 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 45 0.002 UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HC... 44 0.002 UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synec... 44 0.002 UniRef50_A9AWP8 N-acetylmuramyl-L-alanine amidase, negative regu... 44 0.002 UniRef50_B8HV25 N-acetylmuramyl-L-alanine amidase, negative regu... 44 0.003 UniRef50_D2AYL5 Negative regulator of beta-lactamase expression-... 43 0.004 UniRef50_P81717 N-acetylmuramoyl-L-alanine amidase A n=1 Tax=Ach... 43 0.004 UniRef50_A0YR44 AmpD n=3 Tax=Oscillatoriales RepID=A0YR44_9CYAN 43 0.005 UniRef50_C1A451 Putative amidase n=1 Tax=Gemmatimonas aurantiaca... 43 0.006 UniRef50_D2AX66 Negative regulator of beta-lactamase expression-... 42 0.007 UniRef50_Q160K6 N-acetyl-anhydromuramyl-L-alanine amidase, putat... 41 0.015 UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regu... 41 0.020 UniRef50_C0G0C8 N-acetylmuramyl-L-alanine amidase, negative regu... 40 0.025 UniRef50_A5IAD5 N-acetylmuramoyl-L-alanine amidase; amidase 2 n=... 39 0.057 >UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=65 Tax=Gammaproteobacteria RepID=AMPD_ECOLI Length = 183 Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust. Identities = 183/183 (100%), Positives = 183/183 (100%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA Sbjct: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT Sbjct: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK Sbjct: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 Query: 181 ETT 183 ETT Sbjct: 181 ETT 183 >UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=192 Tax=Proteobacteria RepID=AMPD_CITFR Length = 187 Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 159/182 (87%), Positives = 168/182 (92%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 MLL++GWL ARRVPSPHYDCRPDDE P+LLVVHNISLPPGEFGGPWIDALFTGTIDP A Sbjct: 1 MLLDEGWLAEARRVPSPHYDCRPDDENPSLLVVHNISLPPGEFGGPWIDALFTGTIDPNA 60 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HP+FA IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVS YQGRERCNDFSIGIELEGT Sbjct: 61 HPYFAGIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSSYQGRERCNDFSIGIELEGT 120 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 DTLAYTDAQYQQLAAVT ALI YP IA NMTGHC+IAP+RKTDPGP+FDWARFR LV+ Sbjct: 121 DTLAYTDAQYQQLAAVTNALITRYPAIANNMTGHCNIAPERKTDPGPSFDWARFRALVTP 180 Query: 181 ET 182 + Sbjct: 181 SS 182 >UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=36 Tax=Proteobacteria RepID=A4W6L1_ENT38 Length = 187 Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 149/182 (81%), Positives = 162/182 (89%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 M L+ GWLV AR VPSPH+DCRP+DE+P+LLVVHNISLPPGEFGGPWIDALFTGTIDP A Sbjct: 1 MQLQNGWLVDARHVPSPHHDCRPEDESPSLLVVHNISLPPGEFGGPWIDALFTGTIDPNA 60 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVS Y GRE+CNDFSIGIELEGT Sbjct: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSSYCGREKCNDFSIGIELEGT 120 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 DT YTDAQYQ L AVTR LI CYP I+ N+TGH DIAP RKTDPGPAFDW+RFR +++ Sbjct: 121 DTTPYTDAQYQALCAVTRKLIACYPTISDNITGHSDIAPVRKTDPGPAFDWSRFRAMLTA 180 Query: 181 ET 182 + Sbjct: 181 SS 182 >UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R6I7_AGGAD Length = 217 Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 97/173 (56%), Positives = 126/173 (72%), Gaps = 1/173 (0%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 ++ GWL+ RRV SPH+D RPD + +LL++H ISLPP +FGG +ID F G +D QAHP Sbjct: 41 IKDGWLLDERRVLSPHFDQRPDPQDISLLIIHYISLPPEQFGGGYIDDFFQGKLDAQAHP 100 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 +F EI+ LRVSAHCLI R G I QYV F+ RAWHAG+S ++GRE+CNDF+IGIELEG++ Sbjct: 101 YFQEISLLRVSAHCLIERTGRITQYVNFNDRAWHAGLSYFEGREKCNDFAIGIELEGSNE 160 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAKN-MTGHCDIAPDRKTDPGPAFDWARF 174 +T QY L +TR ++ YP I K + GHCD++P RK DPG FDW R+ Sbjct: 161 QPFTTQQYDTLQRLTRQIMQAYPRITKERIVGHCDVSPGRKIDPGQYFDWQRY 213 >UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C6APP4_AGGAN Length = 184 Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 94/175 (53%), Positives = 127/175 (72%), Gaps = 1/175 (0%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 + +++GWL R+V SPH+D RP+ + +LL++H ISLPP +FGG +ID F G + P Sbjct: 6 LKIDKGWLTNTRKVVSPHFDARPNPQDISLLIIHYISLPPEQFGGSYIDDFFQGKLAPNR 65 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HP+FAEI+ LRVSAHCLI R GEI QYV F+ RAWHAG+S ++GRE+CNDF+IGIELEG+ Sbjct: 66 HPYFAEISTLRVSAHCLINRAGEITQYVNFNDRAWHAGISCFEGREKCNDFAIGIELEGS 125 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKN-MTGHCDIAPDRKTDPGPAFDWARF 174 + +T QY L +T+ ++ YP I K + GHCD++P RK DPG FDWA + Sbjct: 126 NEQPFTTQQYVSLQRLTQEIMRAYPLITKERIVGHCDVSPGRKIDPGQYFDWATY 180 >UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Gammaproteobacteria RepID=Q0AC58_ALHEH Length = 186 Score = 208 bits (529), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 100/175 (57%), Positives = 120/175 (68%), Gaps = 1/175 (0%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 G + A + PSP+ D RP L++H ISLPPG FGGPWID LFT + AHP+F Sbjct: 10 SGLIRPAHQHPSPNQDARPAGVAVDALIIHGISLPPGAFGGPWIDRLFTNRLPADAHPYF 69 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 A + LRVS H LIRRDG + QYVP +RAWHAG S+ GRERCNDF+IGIELEGTD Sbjct: 70 ARVHRLRVSCHLLIRRDGALTQYVPLHRRAWHAGQSRLAGRERCNDFAIGIELEGTDETP 129 Query: 125 YTDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 YT+AQYQ L + R L+ +P I + + GH D+AP RKTDPGPAFDWAR R + Sbjct: 130 YTEAQYQVLGPLCRTLMAAFPGITPERVVGHSDVAPGRKTDPGPAFDWARLRAAL 184 >UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=Q65VN8_MANSM Length = 190 Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 90/179 (50%), Positives = 128/179 (71%), Gaps = 1/179 (0%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 ++ GWL G R++ SPH+D RP +LLV+H ISLPP +FGG +I+ F G ++P+ HP Sbjct: 10 IKNGWLSGVRKIISPHFDSRPSQADISLLVIHYISLPPEQFGGGYIEDFFQGKLNPETHP 69 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 +F I +RVSAHCLI RDG + Q+V F+ RAWHAG S +QGRE+CND++IGIELEG++ Sbjct: 70 YFQTIYQIRVSAHCLIGRDGRVTQFVSFNDRAWHAGESCFQGREKCNDYAIGIELEGSNE 129 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAKN-MTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 +T+ QYQ+LA +T + YP I ++ + GHCD+AP RK DPG F+W ++ L+ + Sbjct: 130 QPFTEVQYQRLAELTNIIRHYYPKITEDRIVGHCDVAPGRKIDPGQYFEWTKYFDLLKE 188 >UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=22 Tax=Gammaproteobacteria RepID=A8FQB8_SHESH Length = 205 Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 103/171 (60%), Positives = 123/171 (71%), Gaps = 2/171 (1%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 GW+ ARR SPH++ RP +E +LLV+HNISLP G FG +ID LF G +D A F Sbjct: 32 GWINDARRCESPHFNHRPLNEV-SLLVIHNISLPAGCFGESYIDQLFKGCLDVSADASFI 90 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 ++ L VSAH LIRRDGE+VQYV RAWHAGVS Y RE CNDF+IGIELEGTDTLAY Sbjct: 91 DLKGLEVSAHFLIRRDGELVQYVSCGDRAWHAGVSSYGSREGCNDFAIGIELEGTDTLAY 150 Query: 126 TDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAFDWARFR 175 T+ QY++L +T AL D YP + + GHCDIAP RKTDPG +FDW RF+ Sbjct: 151 TEQQYRELKILTLALFDAYPMLNIDRVVGHCDIAPGRKTDPGESFDWQRFK 201 >UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVS6_9GAMM Length = 206 Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 101/183 (55%), Positives = 127/183 (69%), Gaps = 10/183 (5%) Query: 3 LEQGWLVG--ARRVPSPHYDCRP-------DDETPTLLVVHNISLPPGEFGGPWIDALFT 53 ++ GWL G R VPSP++D R + E LLVVHNISLPP +FGG I+ LFT Sbjct: 16 VDSGWLSGEGVRHVPSPNFDERQVASPHCDEREAIDLLVVHNISLPPNQFGGEGIEQLFT 75 Query: 54 GTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSI 113 +DP HP++ I L+VSAH L+RRDGE+VQ+VPF KRAWHAG S Y GR++CNDF+I Sbjct: 76 NCLDPSEHPYYEGIYQLKVSAHALVRRDGEVVQFVPFHKRAWHAGQSSYCGRDKCNDFAI 135 Query: 114 GIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDI-AKNMTGHCDIAPDRKTDPGPAFDWA 172 GIELEG+D + QY+ L A+T LI YP + A+++ GH DIAP RKTDPGP F WA Sbjct: 136 GIELEGSDDQPFEAEQYRALVALTAQLIQTYPQLSAEHIVGHSDIAPGRKTDPGPHFKWA 195 Query: 173 RFR 175 +R Sbjct: 196 DYR 198 >UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Proteobacteria RepID=Q46X31_RALEJ Length = 203 Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 99/174 (56%), Positives = 122/174 (70%), Gaps = 2/174 (1%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 +GW+ ARRVPSP++D RP L+V+HNISLPPG+FG I+A F +DP HPFF Sbjct: 18 EGWVPAARRVPSPNFDERPAGMPVDLVVLHNISLPPGQFGSGDIEAFFQNRLDPDRHPFF 77 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 A I ++VSAH L+RRDGE+VQ+VP KRAWHAG S + GR RCNDFS+GIE+EGTD L Sbjct: 78 ATIHQVQVSAHFLVRRDGELVQFVPCTKRAWHAGQSDFFGRSRCNDFSVGIEIEGTDDLP 137 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 +T AQY + + +AL P + + GH DIAP RKTDPGP FDW RF L Sbjct: 138 FTAAQYTTTSTLVKALRATLP--VRAVAGHSDIAPGRKTDPGPHFDWDRFAGLA 189 >UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regulates ampC) n=25 Tax=Proteobacteria RepID=B0VMP8_ACIBS Length = 189 Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 90/178 (50%), Positives = 120/178 (67%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 G L GAR+VPSP+++ RP ++VVHNISLPP +FGG +I+ F +D HP+F Sbjct: 12 GQLKGARQVPSPNFNQRPAGTEIQMIVVHNISLPPSQFGGGYIEQFFQNKLDWSVHPYFQ 71 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 I ++VS H LI R GE++Q+V F+ RAWHAG S Y + CND+SIGIELEG+D L + Sbjct: 72 TIEGMQVSTHLLILRTGEVLQFVNFNDRAWHAGRSSYLAKIECNDYSIGIELEGSDDLPF 131 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 D QY+ L V A+ YP+I ++ GH DIAP RKTDPGP F W FR L++++ T Sbjct: 132 EDLQYEVLTDVVTAIRQAYPEIKNHIAGHSDIAPGRKTDPGPYFKWQHFRQLLAQKKT 189 >UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ97_CHRSD Length = 197 Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 106/182 (58%), Positives = 126/182 (69%), Gaps = 6/182 (3%) Query: 7 WLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAE 66 WL AR V SP+++ RP+DE + LV+H+ISLPPG FGG I+ LFT +DP AHP+FA Sbjct: 8 WLTAARHVASPNHNARPEDEV-SALVLHSISLPPGRFGGDAIERLFTNRLDPAAHPYFAT 66 Query: 67 IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY----QGRERCNDFSIGIELEGTDT 122 I LRVSAH LIRRDGE VQ+V FD+RAWHAG S++ + R NDFSIGIELEG + Sbjct: 67 IHALRVSAHVLIRRDGEAVQFVGFDRRAWHAGRSRWWDGHRERRELNDFSIGIELEGDEI 126 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 AY +AQY+ LA V AL YP + +T H IAP RKTDPGPAFDWA FR V Sbjct: 127 HAYREAQYRCLARVFLALHARYPALTLARVTSHARIAPLRKTDPGPAFDWAYFRQCVQAL 186 Query: 182 TT 183 TT Sbjct: 187 TT 188 >UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 Tax=Betaproteobacteria RepID=B3R6P0_CUPTR Length = 205 Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 101/173 (58%), Positives = 123/173 (71%), Gaps = 2/173 (1%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 GW+ ARRVPSP++D RPD L+V+HNISLPPG+FG I+A F +DP HPFFA Sbjct: 21 GWVPAARRVPSPNFDARPDGMPVDLVVLHNISLPPGQFGSGDIEAFFQNRLDPDKHPFFA 80 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 I ++VSAH L+ R GE+VQ+VP +RAWHAG S++ GR RCNDFSIGIE+EGTD + + Sbjct: 81 TIHQIQVSAHFLVTRSGELVQFVPCTQRAWHAGQSEFFGRARCNDFSIGIEIEGTDDVPF 140 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 T AQY AA+ RAL YP + + GH DIAP RKTDPGP FDW RF L Sbjct: 141 TAAQYNTTAALVRALRAAYP--VQAIAGHSDIAPGRKTDPGPHFDWNRFARLA 191 >UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=14 Tax=Gammaproteobacteria RepID=Q4ZY97_PSEU2 Length = 182 Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 96/174 (55%), Positives = 119/174 (68%), Gaps = 2/174 (1%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 GW G + PSP+++ RP+ E +LLV+HNISLPP +F + A F +D HP+F Sbjct: 8 GWCDGVQHCPSPNFNARPEGEI-SLLVIHNISLPPAQFKTGKVQAFFQNQLDIDEHPYFV 66 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 IA LRVSAH LI RDGE++Q+V RAWHAGVS +QGRE CNDFS+GIELEGTD + Sbjct: 67 GIADLRVSAHFLIERDGEVIQFVSCLDRAWHAGVSSFQGREGCNDFSVGIELEGTDDQPF 126 Query: 126 TDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 TDAQY L +TR L + I + + GH D+AP RKTDPGP FDWARFR + Sbjct: 127 TDAQYDALIDLTRQLRQAFEAITPERICGHSDVAPGRKTDPGPCFDWARFRAAL 180 >UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=51 Tax=Proteobacteria RepID=B2JH28_BURP8 Length = 212 Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 96/172 (55%), Positives = 121/172 (70%), Gaps = 3/172 (1%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GW+ AR++PSP+++ RP+ PTL+VVHNISLPP EFGGP I LF +D AHP++ Sbjct: 20 NGWVDEARQLPSPNFEARPNGARPTLIVVHNISLPPNEFGGPGITDLFLNRLDCDAHPYY 79 Query: 65 -AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 A + +RVSAH +IRRDG + QYV D+RAWHAG S + GRERCNDFSIGIELEG+D Sbjct: 80 DAHLRDVRVSAHFVIRRDGALEQYVSCDERAWHAGASNFFGRERCNDFSIGIELEGSDAS 139 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 + AQY LA + R+L Y ++ GH DIAP RKTDPGP F+W R + Sbjct: 140 PFERAQYATLAPLVRSLAAHYE--IDSLAGHSDIAPGRKTDPGPHFEWPRLQ 189 >UniRef50_A6T2C3 Negative regulator of beta-lactamase expression n=2 Tax=Oxalobacteraceae RepID=A6T2C3_JANMA Length = 211 Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 102/178 (57%), Positives = 129/178 (72%), Gaps = 4/178 (2%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 GW VGA+ +PSP++D R + LLV+HNISLPPG+FGGP+I LF +D +A P+F Sbjct: 20 GWAVGAQHLPSPNFDARVEGTEIALLVIHNISLPPGQFGGPFIADLFLNRLDYEADPYFD 79 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 ++ LRVSAH LIRRDG ++Q+V + RAWHAG S + G+ERCNDFSIGIELEGTD A+ Sbjct: 80 QLRPLRVSAHFLIRRDGTVMQFVSANDRAWHAGASSFCGQERCNDFSIGIELEGTDFEAF 139 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF--RVLVSKE 181 D QY LAA+T AL YP + ++TGH IAP RKTDPGP FDWA + R LV ++ Sbjct: 140 ADEQYAALAALTVALKAAYPLL--HVTGHEHIAPGRKTDPGPFFDWAGYEERYLVQQK 195 >UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Psychrobacter RepID=A5WCS6_PSYWF Length = 206 Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 93/185 (50%), Positives = 119/185 (64%), Gaps = 6/185 (3%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGP------WIDALFTG 54 + +E G L A +PSP+Y+ RP+ + +V+HNISLPP EFG ++ ALFT Sbjct: 17 LSIESGLLTQADWLPSPNYNQRPESCEISAIVIHNISLPPNEFGQTNKQGLHYVKALFTN 76 Query: 55 TIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIG 114 T+D AHP+F I + VSAH I R G+I Q V F+ RAWHAG S Y GR CND+SIG Sbjct: 77 TLDWDAHPYFKSIEGMEVSAHLFIERSGQITQLVNFENRAWHAGRSSYLGRPECNDYSIG 136 Query: 115 IELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 IELEG+D A+T QY L++V A+ YP +++TGH DIAP RKTDPG F+W Sbjct: 137 IELEGSDFQAFTAEQYTALSSVIAAIYKAYPKTRRHLTGHSDIAPGRKTDPGEYFEWDTL 196 Query: 175 RVLVS 179 R LVS Sbjct: 197 RDLVS 201 >UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D5333F Length = 196 Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 88/175 (50%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Query: 8 LVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 L + SP+ D R D + P ++V+H ISLPPGE+GG ++ LF ++D +F EI Sbjct: 22 LKNVEYLNSPNQDDRRDGQDPEIIVIHGISLPPGEYGGSYVCDLFLNSLDTSVCEYFKEI 81 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTD 127 + L+VS+H I R G ++Q+VPF+ RAWHAG S Y+GRE CN FSIGIELEG D Y+D Sbjct: 82 STLKVSSHLFINRLGRVMQFVPFNSRAWHAGESAYRGREMCNHFSIGIELEGQDNDEYSD 141 Query: 128 AQYQQLAAVTRALIDCYPDI-AKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 QY LA + AL + YP I A+++ GH DIAP RKTDPGPAF+W R +S + Sbjct: 142 IQYVILAKIINALFEFYPRISARDIVGHSDIAPKRKTDPGPAFNWKRLYREISGQ 196 >UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A0L5K2_MAGSM Length = 183 Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 99/167 (59%), Positives = 115/167 (68%), Gaps = 1/167 (0%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 R +PSPH D RP E LLVVH ISLPPG+FGG WID LF G +D QA P+F IA LR Sbjct: 6 RYLPSPHCDERPVGEVVELLVVHAISLPPGQFGGGWIDDLFMGVLDAQADPYFVGIASLR 65 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQ 131 V+AH LI RDG I QYVP KR WHAG S +QGR RCNDFSIG+ELEG + + QYQ Sbjct: 66 VAAHFLIGRDGGITQYVPLSKRGWHAGESVWQGRPRCNDFSIGVELEGDEEHPFAAIQYQ 125 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 +LA +TR L P + + + GH DIAP RK DPG FDW RFR ++ Sbjct: 126 RLAQLTRTLQQRLPRLVE-VVGHQDIAPGRKWDPGRQFDWPRFRAML 171 >UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=55 Tax=Proteobacteria RepID=C7RNH8_9PROT Length = 195 Score = 186 bits (471), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 93/169 (55%), Positives = 116/169 (68%), Gaps = 2/169 (1%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 GWL A + SP+ D RP E +++V+H ISLPP FGG I LFT +DP AHP+FA Sbjct: 15 GWLDEALHIVSPNRDPRPPGEVVSMIVIHAISLPPARFGGDGIARLFTNRLDPAAHPYFA 74 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 +I LRVSAH L+RRDGE++Q+V +RAWHAG+S ++GR+ CNDFS+GIELEG D + Sbjct: 75 QIIGLRVSAHFLVRRDGELIQFVSCRERAWHAGLSAWKGRQGCNDFSLGIELEGCDESPF 134 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 DAQY L A+ L YP A + GH DI+P RKTDPGP FDW R Sbjct: 135 EDAQYSCLLALVGRLCAGYPIDA--VVGHSDISPGRKTDPGPCFDWRRL 181 >UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWQ1_9GAMM Length = 219 Score = 184 bits (468), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 90/187 (48%), Positives = 113/187 (60%), Gaps = 6/187 (3%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGP------WIDALFTGTI 56 +EQG L V SP++ RPD L+V+HNISLPP EFG ++ A F + Sbjct: 26 IEQGLLSPCEFVASPNFGQRPDPNDIHLIVIHNISLPPSEFGLKNNQGEHFVRAFFQNQL 85 Query: 57 DPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE 116 DP+AHP+FA I +VSAH I RDG I Q+V FD RAWHAG S Y G CND+SIGIE Sbjct: 86 DPKAHPYFATIYQQQVSAHLFIERDGSITQFVSFDARAWHAGKSSYLGVPNCNDYSIGIE 145 Query: 117 LEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 LEG D + D QYQ L+ V A+ YP ++ GH DIA RK+DPG FDW + R Sbjct: 146 LEGDDYSEFDDRQYQALSGVIAAIYQAYPKTVNHLAGHSDIARGRKSDPGLYFDWVKLRN 205 Query: 177 LVSKETT 183 +V++ Sbjct: 206 MVNRNMV 212 >UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5I4_9GAMM Length = 196 Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 94/172 (54%), Positives = 111/172 (64%), Gaps = 1/172 (0%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GWL GAR PSP+ + RP P +LVVHNISLPPG FGG ++ALF T+D P F Sbjct: 8 NGWLEGARHCPSPNCNVRPAPWAPDMLVVHNISLPPGRFGGDDVEALFCNTLDCSRDPSF 67 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 E+ L VSAH I R+G + Q+V RAWHAGVS + R CNDFSIGIELEGTD A Sbjct: 68 DELRGLEVSAHFFINREGALTQFVSCHDRAWHAGVSTWGSRVNCNDFSIGIELEGTDYQA 127 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKN-MTGHCDIAPDRKTDPGPAFDWARFR 175 Y D QY L+++ L P +A+ + GH DIAP RKTDPG AFDW R R Sbjct: 128 YEDMQYAMLSSLIGELRCRMPSLARGPIVGHSDIAPGRKTDPGEAFDWNRLR 179 >UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A1AXT9_RUTMC Length = 174 Score = 181 bits (460), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 80/176 (45%), Positives = 115/176 (65%), Gaps = 3/176 (1%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 ++ L +++ SP+++ RP+ + +L+V+H+ISLPPG+F I+ FT +D H Sbjct: 1 MINNHRLENIKQINSPNFNKRPN-QAISLIVIHSISLPPGKFNNNHIEKFFTNQLDTSQH 59 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 P+F I L+VSAH LI+R+G I+Q+VPF++RAWHAG S Y+G+ CNDFSIGIEL+G D Sbjct: 60 PYFKSIKDLKVSAHLLIKRNGMIIQFVPFNQRAWHAGKSNYKGKHNCNDFSIGIELQGDD 119 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 +Y QY+ L V L YP + GH DI+P RKTDPGP F W++ + Sbjct: 120 NTSYELVQYKVLNNVIDLLKSHYP--ISTIKGHSDISPIRKTDPGPYFKWSKLHAI 173 >UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_NEIFL Length = 199 Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 91/174 (52%), Positives = 117/174 (67%), Gaps = 2/174 (1%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 + + G + AR+ SP++ R DE +L+V+HNISLPP E+ ++ LFT I+P H Sbjct: 19 IWQNGRWLNARQTHSPNFSPREPDEDISLVVLHNISLPPFEYNTGAVENLFTNQINPDEH 78 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 PFF+ I LRVS+H I R GE VQ+V D A+HAGVS +QGRE+CN FSIGIELEG D Sbjct: 79 PFFSIIHTLRVSSHFFISRKGETVQFVSCDDMAYHAGVSSFQGREKCNAFSIGIELEGCD 138 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 +T+AQY L A+ A+ + YP A +TGH DIAPDRKTDPG FDW R + Sbjct: 139 FEPFTEAQYTSLQALLTAISEHYPIQA--VTGHQDIAPDRKTDPGHFFDWPRLQ 190 >UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4 Tax=Proteobacteria RepID=A4SVB0_POLSQ Length = 225 Score = 178 bits (451), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 88/178 (49%), Positives = 114/178 (64%), Gaps = 6/178 (3%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEF----GGPWIDALFTGTID 57 L EQGWL A+ SP+ D RP++ P LLV+H+ISLPPGEF +I F +D Sbjct: 33 LDEQGWLGFAQWRESPNQDARPENIEPDLLVIHHISLPPGEFKAQDSSQYIIDFFQNRLD 92 Query: 58 PQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117 P HP+FAEI +VS+H LI R G ++Q+V +AWHAG+S + GRE+CNDFSIGIEL Sbjct: 93 PNRHPYFAEIEGQKVSSHFLITRSGRLIQFVSTKHKAWHAGLSSFLGREKCNDFSIGIEL 152 Query: 118 EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 EG + + QY+ L+ L YP + GH DIAP+RKTDPG +FDW RF+ Sbjct: 153 EGDGETPFEEIQYKVLSETVGKLSATYPSL--QFAGHSDIAPERKTDPGISFDWKRFQ 208 >UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkholderiales RepID=A4G8Q1_HERAR Length = 185 Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 2/153 (1%) Query: 29 TLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYV 88 +LLV+HNISLPP +FGGP+I LF +D A P+F ++ LRVSAH LIRRDG ++Q+V Sbjct: 4 SLLVIHNISLPPEQFGGPFIADLFLNQLDYAADPYFEQLKLLRVSAHFLIRRDGNVMQFV 63 Query: 89 PFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIA 148 RAWHAG S + G+ERCNDFSIGIELEGTD + +AQY LA++T AL YP Sbjct: 64 SARDRAWHAGASSFCGQERCNDFSIGIELEGTDFQPFEEAQYIALASLTVALKQAYP--L 121 Query: 149 KNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 ++++GH IAP RKTDPGP F+W ++ L K+ Sbjct: 122 RHVSGHEQIAPGRKTDPGPFFNWTEYQALYRKK 154 >UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Proteobacteria RepID=B1XX10_LEPCP Length = 209 Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 87/171 (50%), Positives = 113/171 (66%), Gaps = 2/171 (1%) Query: 4 EQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 +GW ARRVPSP++ RP + L VVH+ISLPPG +GG I+ FT +DP AHP+ Sbjct: 14 SRGWHRDARRVPSPNFGSRPVGASIDLAVVHSISLPPGVYGGDAIERFFTNRLDPAAHPY 73 Query: 64 FAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 FA +A L+VSAH +IRRDGE++Q+V +RAWHAG S ++GR CND S+GIELEG + Sbjct: 74 FATLAGLQVSAHFVIRRDGELLQFVDVRERAWHAGASSWRGRSNCNDHSLGIELEGLEGQ 133 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + AQY+ LA + R +P + + GH IAP RK DPG FDW R Sbjct: 134 RFEPAQYRVLAGLLRDARTAWP--LREVVGHEHIAPGRKHDPGAGFDWCRL 182 >UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 Tax=Proteobacteria RepID=D0J795_COMTE Length = 209 Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 86/177 (48%), Positives = 115/177 (64%), Gaps = 2/177 (1%) Query: 4 EQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 + GW AR++ SP++ RP D L+V+H+ISLPPG++G + LFT +D AHP+ Sbjct: 16 QAGWYGAARQLRSPNFGPRPADAQIDLVVIHSISLPPGQYGTGAVQQLFTNQLDWDAHPY 75 Query: 64 FAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 + I L VS+H I R GEI Q+V D RAWHAGVSQ++GRERCND SIGIELEG + L Sbjct: 76 YQGIRGLEVSSHFFITRQGEIWQFVSCDDRAWHAGVSQWRGRERCNDDSIGIELEGLEGL 135 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 ++ QYQ L + A+ YP + + GH IAP RK DPGP FDW R ++ + + Sbjct: 136 SFEAPQYQALQQLCMAIAAHYP--VRYIAGHEHIAPGRKQDPGPGFDWQRLQLQLGR 190 >UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Acidovorax RepID=A1TKH5_ACIAC Length = 209 Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 83/170 (48%), Positives = 106/170 (62%), Gaps = 2/170 (1%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 GW + A +PSP++ RP L+VVH+ISLPPGE+G + LFT +D AHP++A Sbjct: 25 GWYLPAMALPSPNFGPRPAQAAIDLIVVHSISLPPGEYGTGEVQRLFTNALDWDAHPYYA 84 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 I L+VSAH I R G + Q+V RAWHAG S Y+GR+ CND SIGIELEG + + Sbjct: 85 GIRGLQVSAHFFIERGGRLWQFVDCGDRAWHAGPSAYRGRDNCNDDSIGIELEGLEGDTF 144 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 AQYQ LA + R + YP ++ GH +AP RK DPGP FDW R Sbjct: 145 EPAQYQALATLCRDIAQRYP--VAHVAGHEHVAPGRKRDPGPGFDWRELR 192 >UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amidase, AmpD (Negative regulator of AmpC) n=1 Tax=Limnobacter sp. MED105 RepID=A6GR52_9BURK Length = 187 Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 76/177 (42%), Positives = 92/177 (51%), Gaps = 4/177 (2%) Query: 1 MLLEQGWLVG--ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDP 58 M L++GW+ R+ SP+ D RP LVVH ISLP I LF +D Sbjct: 1 MWLDEGWIEEDWVHRLQSPNQDARPMGTVVDTLVVHCISLPERGRDSALITDLFLNRLDC 60 Query: 59 QAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELE 118 +H F E+ L VS+H LI RDG + Q+V +KRAWHAG+S R N FSIGIEL Sbjct: 61 HSHASFGELIGLHVSSHFLIDRDGSVTQFVSCEKRAWHAGISAAMDRSNFNHFSIGIELL 120 Query: 119 GTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 G + QY L + L YP K H +IAP RKTDPGP FDW R Sbjct: 121 GDIYTPFEQTQYASLKRLALELQARYP--LKYAMAHSEIAPTRKTDPGPFFDWKGLR 175 >UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7L0_9BURK Length = 196 Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 92/173 (53%), Gaps = 27/173 (15%) Query: 4 EQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 + GW A+ VPSP++ RP L+V+H+ISLPPG +GGP + LFT T+D AHP Sbjct: 30 DAGWWSEAQHVPSPNFGPRPASAVVDLVVIHSISLPPGVYGGPEVQQLFTNTLDWDAHPX 89 Query: 64 FAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 WHAG S Y+ R+ CND SIGIELEGT+ Sbjct: 90 XXX-------------------------XXXWHAGKSCYRDRDHCNDDSIGIELEGTEED 124 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 +T QY+ L + RA+ Y + + GH IAP RKTDPGP F+W+ ++ Sbjct: 125 RFTPPQYESLHRLCRAIAQNY--QIQYLAGHEHIAPGRKTDPGPGFEWSELKL 175 >UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=beta proteobacterium KB13 RepID=B6BVD5_9PROT Length = 134 Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 53/103 (51%), Positives = 70/103 (67%) Query: 38 LPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHA 97 +PPG + +I+ F +D AHP+F EI L+VSAH LI+R+GE++Q+V + RAWHA Sbjct: 1 MPPGIYNNNYIEDFFQNQLDIDAHPYFKEIKDLKVSAHFLIKRNGELIQFVSCNDRAWHA 60 Query: 98 GVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRAL 140 G S YQG+E CNDFSIGIELEG D + D QY +L + L Sbjct: 61 GESSYQGKENCNDFSIGIELEGDDETPFEDDQYIKLIELLGCL 103 >UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodospirillaceae RepID=Q2RVT4_RHORT Length = 241 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 21/163 (12%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 SP+ D RP + +LV+H +P + A +DPQA +VSAH Sbjct: 17 SPNADDRPPGQIIDMLVIHYTGMPSAQ-------AALARLLDPQA----------QVSAH 59 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD----TLAYTDAQYQ 131 LI DG + V +RAWHAGVS + GR N SIGIEL + +AQ Sbjct: 60 WLIDEDGTAYKLVEERRRAWHAGVSAWGGRPGVNARSIGIELVNPGHEFGYRPFPEAQMT 119 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L A+ R +++ +P A ++ GH D+AP RK DPG FDW R Sbjct: 120 TLIALGRGILERHPIPAAHVVGHADVAPTRKEDPGELFDWQRL 162 >UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BV14_GRABC Length = 250 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 26/169 (15%) Query: 12 RRVPSPHYDCRPDDETPT-----LLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAE 66 R PSP+YD RP T +LV+H + ID L DP+A Sbjct: 12 RERPSPNYDARPSATAGTPGAVDMLVLHYTGMTSAAAA---IDRL----CDPEA------ 58 Query: 67 IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT----DT 122 RVS+H ++ DG + + V RAWHAG+S ++GR NDFS+GIE+ Sbjct: 59 ----RVSSHYVVEEDGTVWRLVWEQYRAWHAGISHWRGRSWLNDFSVGIEIVNPGHEWGY 114 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 A+ +AQ + + A+ A++ + A ++ H DIAPDRK DPG FDW Sbjct: 115 RAFPEAQMRSVLALAHAIVRQHSIPAAHIVAHSDIAPDRKQDPGELFDW 163 >UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DDM5_MYXXD Length = 203 Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 23/172 (13%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 PSP+ + R + T+ V+H+ + G W+ +PQ+ +V Sbjct: 50 NAPSPNQNSRGGTKIDTI-VMHHTATNNGAGDLSWMR-------NPQS----------KV 91 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR-ERCNDFSIGIEL--EGTDTLAYTDAQ 129 SAH ++ RDG+I Q V DKRAWHAG + G N+ SIGIE+ +G+ +T+AQ Sbjct: 92 SAHYMVDRDGKIYQLVGDDKRAWHAGKGELHGVPSDINNRSIGIEIVNDGSGKTPFTEAQ 151 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWARFRVLVS 179 Y+ L +T L + KN+ GH D+A RK DP P FDW R R +S Sbjct: 152 YKSLTQLTGYLKQQHNIPMKNIVGHADVAVPKGRKNDPAPNFDWNRLRKGIS 203 >UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CW21_9RHOB Length = 418 Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 57/160 (35%), Positives = 80/160 (50%), Gaps = 17/160 (10%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PSP++ R D P+L+V+H ++ A DP++ VSA Sbjct: 204 PSPNFGPRRDGLKPSLVVLHYTAMNSAR-------AALERLCDPESE----------VSA 246 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLA 134 H LI DG + Q V + RAWHAGV ++QG+ N SIGIEL+ + AQ + L Sbjct: 247 HYLIGCDGTLWQMVREEDRAWHAGVGEWQGQSDINSRSIGIELDNRGDHPFAQAQIRVLE 306 Query: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + ++ + A + GH D+AP RK DPGP FDW R Sbjct: 307 RLLPQIMTRWSIPAAGVIGHSDMAPGRKHDPGPRFDWLRL 346 >UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NMR2_9RHOB Length = 227 Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/160 (36%), Positives = 79/160 (49%), Gaps = 17/160 (10%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PSP++ R D PTL+V+H ++ + DAL + AH VSA Sbjct: 13 PSPNFGPRRDGLKPTLIVLHYTAMHSAD------DALER----------LCDPAH-EVSA 55 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLA 134 H LI RDG + Q V RAWHAG ++ G+ N SIGIEL+ T + Q L Sbjct: 56 HYLIGRDGTLWQLVHEPDRAWHAGAGEWHGQTDINSRSIGIELDNAGTHPFAAPQMSALD 115 Query: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + ++ + + + GH D+AP RK DPGP FDW R Sbjct: 116 HLLPDIMGRWNIPPQGVIGHSDMAPGRKIDPGPKFDWQRL 155 >UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A2_BRUC2 Length = 268 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 21/178 (11%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 ++LE+ A PSP++ R D + P L++H +TG + + Sbjct: 15 LVLEKPDYKEAELDPSPNFGPRRDGKQPVFLILH-----------------YTGLVTAKE 57 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 + + VSAH ++ DG +VQ V RAWHAG S ++G N SIGIE+ Sbjct: 58 AMDVLKSPEMEVSAHYVVHEDGRVVQMVSEKARAWHAGKSFWKGETDINSASIGIEIVNP 117 Query: 121 DTLA----YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L + DAQ + + + + + + +N+ H DIAP RKTDPG +F W R Sbjct: 118 GVLENYPPFHDAQIEAVIRLCQDICKRHEIRPENVLAHSDIAPARKTDPGQSFPWKRL 175 >UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodobacterales RepID=Q28T26_JANSC Length = 227 Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 17/164 (10%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 A+ + SP++ R D P L+V+H ++P A + A Sbjct: 3 AKSLQSPNFGPRRDGLKPELVVIHYTAMPNCA----------------SAAKVLCDPAR- 45 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQY 130 VSAH LI RDG+++ VP D RAWHAG +++G N SIGIEL+ +++ Sbjct: 46 EVSAHYLIGRDGDVLNLVPEDMRAWHAGKGEWRGAGDVNSRSIGIELDNDGLTPFSEPLM 105 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L + ++ + + GH D+AP RK DPG FDW R Sbjct: 106 AALETLLPTVLAAWRIGPDGVIGHSDMAPGRKIDPGRRFDWQRL 149 >UniRef50_Q093H8 Negative regulator of beta-lactamase expression n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q093H8_STIAU Length = 280 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 10/125 (8%) Query: 65 AEIAHLR-----VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR-ERCNDFSIGIEL- 117 ++AH+R VSAH ++ RDG+I Q V KRAWHAG S+ G N SIGIE+ Sbjct: 156 GDLAHMRNPASEVSAHYMVDRDGKIYQLVNDSKRAWHAGKSELHGVPTDVNSRSIGIEIV 215 Query: 118 -EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWARF 174 +G+ A+T+AQY+ L + L + N+ GH D+A RK DP FDW R Sbjct: 216 NDGSGKTAFTEAQYKSLTQLVGYLKQEHGVPMNNIVGHKDVAVPKGRKNDPASNFDWNRL 275 Query: 175 RVLVS 179 R +S Sbjct: 276 RTGIS 280 >UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YHQ4_9FLAO Length = 319 Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 12/115 (10%) Query: 72 VSAHCLIRR--DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL---------EGT 120 VSAH L+ D EI Q V +KR++HAGVS ++ + ND SIGIE+ G Sbjct: 107 VSAHYLVNNTGDNEIYQLVDENKRSYHAGVSAWRNDKNLNDTSIGIEIVNTGYTTDATGK 166 Query: 121 DTLA-YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 T A ++D Q +++AA+ + ++ Y N+ GH DIAP RK DPGP F W + Sbjct: 167 RTFAPFSDDQVKKVAALVKDIVTRYQIQPTNVLGHSDIAPTRKQDPGPMFPWKKL 221 >UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=6 Tax=Alphaproteobacteria RepID=B0T844_CAUSK Length = 243 Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 23/170 (13%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 +G PSP++D R P +V+H + GE A DP+A Sbjct: 5 IGFVDAPSPNFDAR--KSVPDCVVLHYTGMETGE-------AALARMCDPEA-------- 47 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD-TLAYTD 127 +VSAH ++ DG + + VP ++RAWHAG + ++G + N SIG+E+ Y Sbjct: 48 --KVSAHYMVEEDGRVFRLVPEERRAWHAGAAFWKGVKDINSASIGVEIVNPGHEFGYRP 105 Query: 128 AQYQQLAAVTRALIDCYPDIA---KNMTGHCDIAPDRKTDPGPAFDWARF 174 Q+AAV L D + GH DIAP RK DPG F W R Sbjct: 106 FPDAQVAAVINLLADIRSRWTIDDDRILGHSDIAPGRKIDPGELFPWKRL 155 >UniRef50_A8TR24 Negative regulator of beta-lactamase expression n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR24_9PROT Length = 247 Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 21/161 (13%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PSP++ RP +L++H + E DAL DP A +VSA Sbjct: 11 PSPNHGPRPVGAPIDILLLHYTDMTRAE------DALDR-MCDPAA----------QVSA 53 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT----LAYTDAQY 130 H L+ DG + + V D+RAWHAGVS + G N SIGIE+ + D Q Sbjct: 54 HYLVGEDGRVWRMVAEDRRAWHAGVSWWDGDSDINSRSIGIEISNPGHSHGYRPFPDVQM 113 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 L ++ R ++ +P A + GH D++P RK DPG FDW Sbjct: 114 SALESLCRGILARHPIPANRVLGHSDVSPGRKIDPGHLFDW 154 >UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Shewanella denitrificans OS217 RepID=Q12NJ5_SHEDO Length = 272 Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 77/183 (42%), Gaps = 54/183 (29%) Query: 28 PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQY 87 P+ +V+H GG + I+PQA + SAH +I G+IVQ Sbjct: 26 PSAVVIHYT-------GGSTLAGAVEWLINPQA----------KASAHVVIGEAGDIVQL 68 Query: 88 VPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL------------------------ 123 VPF++ AWHAG S YQGR N FSIGIEL L Sbjct: 69 VPFNQVAWHAGKSHYQGRSNFNRFSIGIELVNPGQLTLVGQQHCAWFGDPYPQERVVKIP 128 Query: 124 -----------AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWA 172 AYT AQ + + L + YP + GH +I+P RK DPGPAF A Sbjct: 129 QKDSIQEAVWCAYTQAQIIAVKRLLLMLKEYYP--INLLVGHDEISPGRKRDPGPAFPMA 186 Query: 173 RFR 175 R Sbjct: 187 PLR 189 >UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHF6_9RHIZ Length = 256 Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 77/169 (45%), Gaps = 22/169 (13%) Query: 8 LVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 LVG+ RV H + R P+LL++H + E W+ Sbjct: 9 LVGSVRVAENH-EPRRGGVRPSLLILHYTGMSSAEKAIDWL-----------------AR 50 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-TDTLAYT 126 A VS H +I DG I Q VP RAWHAG S ++G N SIGIE++ Y Sbjct: 51 AESNVSCHYVIDEDGRITQLVPESLRAWHAGASFWRGETDINSHSIGIEIQNPGHQHGYP 110 Query: 127 D---AQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWA 172 D AQ Q + A+ + + + A + H DIAP RK DPG F+WA Sbjct: 111 DFPAAQMQAVIALGKDIAQRHRMAADAVLAHSDIAPGRKIDPGEKFNWA 159 >UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BSD7_9RICK Length = 248 Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 4/106 (3%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG----TDTLAYT 126 +VS+H LI+ +GEI+ VP AWHAG+S ++ + N +SIGIE+ ++ Sbjct: 52 KVSSHYLIKNNGEILTLVPDLYVAWHAGISSWKNYKSINKYSIGIEISNPGHEYSYKKFS 111 Query: 127 DAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWA 172 Q + + ++ LI Y + GH DIAPDRK DPG F W Sbjct: 112 KEQVKSIIKLSTYLIKKYNIKPNFILGHSDIAPDRKKDPGEKFPWK 157 >UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Fusobacteriaceae RepID=C7NA60_LEPBD Length = 316 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 7/107 (6%) Query: 72 VSAHCLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA----- 124 VS+H L+ +++ + V +KRAWHAG S+++ + ND SIGIE+ ++ Sbjct: 115 VSSHYLVSDQKNDPVFYLVDENKRAWHAGASEWKTTKNLNDSSIGIEIVNNGDVSGRFEP 174 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 + D Q +++A + R LID Y N+ GH DIAP RK DPGP F W Sbjct: 175 FKDFQIKEVAVLVRHLIDKYEIPPTNILGHSDIAPQRKPDPGPLFPW 221 >UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=28 Tax=Enterobacteriaceae RepID=A7FHD3_YERP3 Length = 283 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 16/119 (13%) Query: 72 VSAHCLI-----RRDGEIV--QYVPFDKRAWHAGVSQYQGRERCNDFSIGIE-------- 116 VSAH LI + G+ + Q VP +RAWHAGVS +QGR ND SIGIE Sbjct: 72 VSAHYLIPTHPKKAGGKAIALQLVPEAQRAWHAGVSSWQGRNNLNDTSIGIEIVNLGFTE 131 Query: 117 -LEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + G Y ++Q + + +T+ ++ Y ++ H DIAP RK+DPGP F W R Sbjct: 132 KMLGRTWYPYNESQIELIEQLTKDIVQRYNISPSDVVAHSDIAPLRKSDPGPLFPWKRL 190 >UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXY2_CHLT3 Length = 288 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/135 (38%), Positives = 67/135 (49%), Gaps = 37/135 (27%) Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL--------EGTD 121 L+ SAH +I R+GEI Q PFD+ WHAG S + R N FSIGIE+ +GT+ Sbjct: 58 LKASAHLVIGRNGEIYQLAPFDRITWHAGKSNWHERSGLNQFSIGIEIDNAGRLTKQGTE 117 Query: 122 TLA---------------------------YTDAQYQQLAAVTRALIDCYPDIAKNMTGH 154 L+ YT+AQ + + R L Y DI K + GH Sbjct: 118 YLSWFGKSYAANEVFSGVHRHEQTLSFWHRYTEAQILLVEEICRLLRQVY-DI-KEILGH 175 Query: 155 CDIAPDRKTDPGPAF 169 +I+P RKTDPGPAF Sbjct: 176 EEISPGRKTDPGPAF 190 >UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protein n=2 Tax=Leptotrichia RepID=C9MVU9_9FUSO Length = 322 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 7/112 (6%) Query: 67 IAHLRVSAHCLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 + + VSAH LI +++ + V ++RAWHAG S+++ + ND SIGIE+ + ++ Sbjct: 115 LTNNEVSAHYLISNQKNDPVFYLVDENRRAWHAGASEWKTSKNLNDSSIGIEIVNSGNVS 174 Query: 125 -----YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 + D Q + +A + + L D Y A N+ GH DIAP RK DPGP F W Sbjct: 175 GSFEPFRDFQIKDVAVLVKYLADKYEIPATNILGHSDIAPQRKPDPGPLFPW 226 >UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6 Tax=Sphingomonadales RepID=A5V2C7_SPHWW Length = 241 Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 25/162 (15%) Query: 15 PSPHYDCRPDDETP-TLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 PSP++D R P T+LV+H +TG D + +VS Sbjct: 11 PSPNHDER---TLPITMLVLH-----------------YTGMADAASAIARLTDPEAKVS 50 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD-TLAYTDAQYQQ 132 +H L+ DG++++ VP D+RAWHAG S ++G N SIGIE+ L Y Q Sbjct: 51 SHYLVAEDGQVMRLVPEDRRAWHAGQSSWRGVTDVNSASIGIEIVNPGHELGYRPFPKPQ 110 Query: 133 LAAVTRALIDC---YPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 + A+ + D +P N+ GH D+AP RK DPG FDW Sbjct: 111 MDALIPLISDITSRHPIEPANVVGHSDVAPRRKQDPGELFDW 152 >UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SF77_TRIAD Length = 232 Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 17/124 (13%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL------------- 117 +VS+H LI G+I Q VP + +AWHAG S + G+ N +SIGIE+ Sbjct: 15 KVSSHFLISEKGDIHQLVPLEFKAWHAGESFWSGKNDINQYSIGIEIVNKGMKLKFLNNK 74 Query: 118 -EGTDTLAYTDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPD--RKTDPGPAFDWAR 173 + + +++ Y LA + L YP I KN+ GH DI RK DPG AFDW Sbjct: 75 VQVLNINTFSNNIYFALAKLICELKKMYPKIQDKNIIGHSDITAKNLRKIDPGIAFDWKF 134 Query: 174 FRVL 177 +L Sbjct: 135 LNIL 138 >UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax=Enterobacteriaceae RepID=C5BFW7_EDWI9 Length = 294 Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 17/124 (13%) Query: 71 RVSAHCLIRRDGE-------IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---T 120 +VSAH LI ++ + ++Q V +KRAWHAG+S + GR ND SIGIE+ T Sbjct: 80 QVSAHYLIPKEPKSIHGQPVVLQLVDENKRAWHAGISSWNGRSGLNDTSIGIEIVNLGYT 139 Query: 121 DTLA-------YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR 173 D + YT+ Q +AA+ + +++ Y N+ GH DIAP RK DPG F W Sbjct: 140 DNMLGQRTWYPYTEKQIAAVAALAKDIVNRYHIEPDNVVGHSDIAPLRKQDPGKLFPWEH 199 Query: 174 FRVL 177 + Sbjct: 200 LAAM 203 >UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D9N0_9RHOB Length = 237 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 17/160 (10%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PS ++ R + P+L+V+H ++ + W+ +P++ +VS+ Sbjct: 18 PSQNFGPRRNGLRPSLIVLHYTAMNDADGACRWL-------CNPES----------QVSS 60 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLA 134 H ++ G + V RAWHAG + G + N SIGIE+ T + AQ + Sbjct: 61 HYVVTEVGAVWSLVEEADRAWHAGAGTWGGLDDINSRSIGIEISNAGTHGFAAAQMDAVE 120 Query: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 A+ ++D + A+ + GH D AP RK DPG FDW R Sbjct: 121 ALVAGIMDRWDIPAEGVIGHSDFAPGRKIDPGGRFDWRRL 160 >UniRef50_C1QGN2 Negative regulator of beta-lactamase expression n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QGN2_9SPIR Length = 344 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 65/135 (48%), Gaps = 32/135 (23%) Query: 72 VSAHCLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL-------EGTDT 122 VSAH LI R + I + V + RAWHAGV+ + R ND SIGIE+ + T+T Sbjct: 74 VSAHYLITTRENDPIYKLVDDNNRAWHAGVTMFDNRLTMNDTSIGIEIVNLGFLEKVTNT 133 Query: 123 -----------------------LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP 159 L Y ++Q Q++ + R LID Y N+ GH DIAP Sbjct: 134 QEQLRRMTKRERENLFFIPYDEYLEYNESQIQKVVYLLRNLIDKYGVKPYNILGHSDIAP 193 Query: 160 DRKTDPGPAFDWARF 174 RK DPGP F W R Sbjct: 194 YRKKDPGPKFPWKRL 208 >UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=33 Tax=Alphaproteobacteria RepID=Q07PU2_RHOP5 Length = 294 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 77/163 (47%), Gaps = 23/163 (14%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 +PSP++ R P ++V+H +P E G GT VS Sbjct: 42 IPSPNFGDRNKGRAPDMIVLHYTGMPDVE--GALARLCQDGT---------------EVS 84 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL--EGTDTLAYTDAQYQ 131 AH ++ DG IVQ VP KRAWHAG++ + G E N SIGIE+ G D Y D + Sbjct: 85 AHYVVLEDGRIVQCVPEAKRAWHAGLAFWAGEEDINSCSIGIEIVNRGHD-WGYPDFPLR 143 Query: 132 QLAAVT---RALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 Q+AAV R +I + H D+AP RK DPG F W Sbjct: 144 QVAAVIALCRGIIIRRGIQPHRVLAHSDVAPARKQDPGEKFPW 186 >UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphaproteobacteria RepID=B6JBX5_OLICO Length = 273 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 4/111 (3%) Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL----EGTDTL 123 A +VS+H ++R +GE+VQ V +KRAWHAGVS ++G N SIGIE+ D Sbjct: 71 AEAKVSSHYVVRENGEVVQLVAEEKRAWHAGVSCWRGASDINSRSIGIEIVNPGHDGDCP 130 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 Y D Q + A+ R ++ + H DIAP RK DPG F W R Sbjct: 131 PYPDPQIAAVIALCRDILARNGIRRDQVLAHSDIAPTRKQDPGEWFPWGRL 181 >UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_9FUSO Length = 301 Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 21/129 (16%) Query: 66 EIAHLRVSAHCLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 E+ RVS+H L+ D +I VP ++RAWHAG S ++GR ND S+GIE+ +D + Sbjct: 84 ELTSSRVSSHFLVLDEDDNKIYNLVPLEQRAWHAGASAFRGRTNINDTSVGIEI-VSDGI 142 Query: 124 A------------------YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 A Y Q ++ A + + + + Y A+N+ H DIAP RK DP Sbjct: 143 AKEFIADPNPYHPYDHYVDYKPIQIEKAAQIIKYVAEKYNIPARNILAHSDIAPSRKKDP 202 Query: 166 GPAFDWARF 174 G F W Sbjct: 203 GAKFPWKEL 211 >UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=26 Tax=Alphaproteobacteria RepID=B2IHS0_BEII9 Length = 304 Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 76/165 (46%), Gaps = 24/165 (14%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PSP++ R P +++H+ ++ GE A DP A VSA Sbjct: 28 PSPNHGDR-KGRQPDAIILHHTAMVSGE-------AALLRLCDPAA----------EVSA 69 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL-----EGTDTLAYTDAQ 129 H L+ DG I Q V RAWHAG S + G N SIGIEL EG + Y +AQ Sbjct: 70 HYLVWEDGRISQLVAEKHRAWHAGQSYWAGERDMNSVSIGIELVHPGPEG-GSPPYEEAQ 128 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 A+ ++ A + GHCDIAPDRK DP F WA+ Sbjct: 129 IAATIALCLDIMRRRSIPAARVLGHCDIAPDRKDDPSAHFPWAQL 173 >UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2 Tax=Alteromonas macleodii RepID=B4RX52_ALTMD Length = 315 Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 50/148 (33%), Positives = 66/148 (44%), Gaps = 38/148 (25%) Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL-------- 123 VSAH + R+G+IVQ +P +K WHAG S Y+GR N +SIGIEL+ L Sbjct: 68 VSAHFALGRNGDIVQMLPTNKIGWHAGKSHYKGRSGLNRYSIGIELDNAGQLKPRGDGTY 127 Query: 124 ----------------------------AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHC 155 YTD Q ++ + L + YP + GH Sbjct: 128 ESWFGNVYRESEVIAAQHPNQSVLGYWHKYTDIQIASTISLCKVLCEHYP--ISVVVGHD 185 Query: 156 DIAPDRKTDPGPAFDWARFRVLVSKETT 183 +IAP RK DPGPAF + R V E + Sbjct: 186 EIAPSRKVDPGPAFPMHQIREQVLLEIS 213 >UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XME2_HIRBI Length = 236 Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 + PS ++D R + ++LV+H + G+ A DP+A +V Sbjct: 10 QAPSVNFDER--RQPLSMLVLHYTGMQTGQ-------AALGRMCDPEA----------KV 50 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL-EGTDTLAYTD---A 128 +AH ++ DG I Q V KRAWHAGV ++G + N SIGIE+ G D Sbjct: 51 AAHYMVEEDGRIFQLVDESKRAWHAGVGTWRGLDDINSRSIGIEIVNGGHDYGLPDFPEI 110 Query: 129 QYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 Q + A+ R ++ + + ++ GH DIAP RK DPG F W + Sbjct: 111 QIDAVIALCRDVLSRHQILQSDIVGHSDIAPGRKDDPGEKFPWEKL 156 >UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Bacteroidetes RepID=A5FA27_FLAJ1 Length = 301 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/101 (40%), Positives = 54/101 (53%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQY 130 +VS+H +I +G++VQ + RAWHAG S + N SIGIEL+ +T+AQ Sbjct: 125 QVSSHYIISENGKVVQMLNDYLRAWHAGNSTWGKNTDLNSSSIGIELDNNGFKPFTEAQI 184 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 L A+ L Y +N GH DIAP RK DP F W Sbjct: 185 SSLVALLTKLKKDYNIPTQNFLGHADIAPGRKQDPSALFPW 225 >UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Tax=Enterobacteriaceae RepID=AMID_ECOLI Length = 276 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/127 (39%), Positives = 67/127 (52%), Gaps = 16/127 (12%) Query: 64 FAEIAHLRVSAHCLI-----RRDGE--IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE 116 A + +VS+H L+ R +G+ I Q VP + AWHAG+S ++G R ND SIGIE Sbjct: 60 LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIE 119 Query: 117 LE--------GTDTLA-YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGP 167 LE G A + AQ Q L + + +I Y +N+ H DIAP RK DPGP Sbjct: 120 LENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGP 179 Query: 168 AFDWARF 174 F W + Sbjct: 180 LFPWQQL 186 >UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=10 Tax=Pseudomonas RepID=Q4ZZT4_PSEU2 Length = 283 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 11/119 (9%) Query: 67 IAHLRVSAHCLIRRDGE--IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL------- 117 + H VSAH LI D + I + V + RAWHAG S+++GR N SIGIE+ Sbjct: 78 LTHGEVSAHYLIGDDSKATIYKLVDENARAWHAGESEWEGRTWLNSSSIGIEIVNPGFKE 137 Query: 118 --EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 G YT+AQ Q + + + ++ K++ GH DIAP RK DPGP F W R Sbjct: 138 TPTGRLWYPYTEAQTQSIIVLLKDIVKRNRIDPKHIIGHSDIAPLRKQDPGPLFPWKRL 196 >UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 Tax=Sphingobacteriaceae RepID=C6XXC7_PEDHD Length = 276 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 1/108 (0%) Query: 67 IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYT 126 I +VS+H +I RDG++ Q V RA HAGVS++ N SIGIE++ Y+ Sbjct: 98 ITRTQVSSHYVIGRDGKVFQMVNDYLRANHAGVSRWGNEMDLNSSSIGIEIDNNGKEPYS 157 Query: 127 DAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + Q + L V RAL Y N GH DIAP RK DP F W R Sbjct: 158 EVQIKSLITVLRALKKRYGIPTANFIGHADIAPGRKNDP-RNFPWKRM 204 >UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 Tax=Candidatus Pelagibacter ubique RepID=Q4FPN2_PELUB Length = 247 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 55/104 (52%), Gaps = 4/104 (3%) Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG----TDTLAYTD 127 VS H LI+ +GEIV+ VP AWHAG S ++ + N SIGIE+ +T Sbjct: 50 VSCHYLIKNNGEIVKIVPDLYIAWHAGKSSWKNYKSLNQNSIGIEITNPGHEYGYKNFTQ 109 Query: 128 AQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 Q L +++ LI Y KN+ GH DIA RK DPG F W Sbjct: 110 KQITTLVKLSKFLIKKYKINPKNILGHSDIAVLRKKDPGEKFPW 153 >UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 Tax=Proteobacteria RepID=A9KGI9_COXBN Length = 257 Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/117 (40%), Positives = 61/117 (52%), Gaps = 14/117 (11%) Query: 72 VSAHCLIRR---DG--EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL--------- 117 VS H LI DG +I Q VP RAWHAGVS +QGR ND SIGIE+ Sbjct: 44 VSGHYLIPESSIDGKKQIFQLVPEKHRAWHAGVSAWQGRIHLNDTSIGIEIVNLGYQEEG 103 Query: 118 EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 E + D Q + + + + +I+ Y + GH DI+P+RK DPGP F W + Sbjct: 104 EKRRWFPFLDYQIELIIELAKDIIERYQLHPTCVVGHSDISPERKADPGPLFPWKKL 160 >UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodospirillum centenum SW RepID=B6IRH2_RHOCS Length = 254 Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 75/165 (45%), Gaps = 21/165 (12%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 +PSP++ R +LV+H + E DP A VS Sbjct: 9 LPSPNHGPRRPGAAIDMLVLHYTGMRTAEEA-------LERLCDPAAE----------VS 51 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL----EGTDTLAYTDAQ 129 AH +I DG + + V D+RAWHAG+S ++G N SIGIEL + +AQ Sbjct: 52 AHYVIDEDGTLYRLVREDRRAWHAGLSFWRGERDVNSRSIGIELVNPGHAFGYRPFPEAQ 111 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L ++ L+ Y ++ GH D+AP RK DPG FDW R Sbjct: 112 MATLESLAADLVAHYRIPPLHVLGHSDVAPARKEDPGELFDWPRL 156 >UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT21_THISH Length = 275 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 81/200 (40%), Gaps = 56/200 (28%) Query: 21 CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR 80 C TP LLV+H + E W ++PQA + SAH +I R Sbjct: 23 CHGGKMTPRLLVIHFTAGASAESSINWF-------LNPQA----------KASAHLVIDR 65 Query: 81 DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---------------- 124 +G I Q VPFD AWHAG S++ N SIGIEL+ L Sbjct: 66 NGHITQMVPFDTVAWHAGASRWNDLSGLNHHSIGIELDNAGRLQPHGDQWRSWFGRDYHD 125 Query: 125 -------------------YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 YT Q + V + L Y +++ GH DIAP RK+DP Sbjct: 126 DEVLVARHKHETEPSGWQLYTREQIETTLEVAQCLFARYG--LEDIVGHEDIAPGRKSDP 183 Query: 166 GPAFDWA--RFRVLVSKETT 183 GPAF R R+L +E + Sbjct: 184 GPAFPMGALRARLLGRQEDS 203 >UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QVR5_BRAHW Length = 342 Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 32/135 (23%) Query: 72 VSAHCLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL-------EGTDT 122 VSAH LI R D I + V + RAWHAG++ + R ND SIGIE+ + T+T Sbjct: 74 VSAHYLITTREDEPIYKLVDDNDRAWHAGITMFDNRHSMNDTSIGIEIVNLGFLQKVTNT 133 Query: 123 -----------------------LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP 159 + + D+Q ++A + + LI+ Y N+ GH DIAP Sbjct: 134 YEDLRRMTKKQREELFFIPYDEYIEFEDSQIDKVAYLLKELIEKYGIKPYNILGHSDIAP 193 Query: 160 DRKTDPGPAFDWARF 174 RK DPGP F W R Sbjct: 194 YRKKDPGPKFPWKRL 208 >UniRef50_Q65A81 N-acetyl-anhydromuramyl-L-alanine amidase n=1 Tax=Salmonella enterica subsp. enterica serovar Typhimurium RepID=Q65A81_SALTY Length = 55 Score = 75.9 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 34/44 (77%), Positives = 37/44 (84%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG 44 ML ++GWLV ARRVPSPHYDCRPDDE P+LLVVHNISLPP Sbjct: 1 MLPDKGWLVEARRVPSPHYDCRPDDEKPSLLVVHNISLPPASLA 44 >UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QX12_CHRSD Length = 303 Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 10/113 (8%) Query: 72 VSAHCLIRRDG-EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL---------EGTD 121 VSAH ++ R+ +I Q V +RAWHAG S + R ND SIGIE+ G Sbjct: 88 VSAHYVLTREAPKIYQLVDESRRAWHAGASAWHSRTNLNDTSIGIEVVNRGPYQTPAGRA 147 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 Y AQ L A+ R ++ + ++ GH DIAP RK DPGP F W R Sbjct: 148 WTPYPSAQIDTLIALARDIVARHAIDPVDVVGHADIAPRRKIDPGPRFPWYRL 200 >UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESH1_AMOA5 Length = 322 Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 18/130 (13%) Query: 63 FFAEIAHLRVSAHCLIRRD--------GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIG 114 F ++I RVSAH ++ + G + Q VP +K AWHAG+S ++G + N SIG Sbjct: 93 FTSDIPEGRVSAHYVVTEEERERDVQGGMVFQVVPEEKTAWHAGISYWRGEQGLNLRSIG 152 Query: 115 IE----------LEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTD 164 +E E + + Q + L +++ +++ Y +N+ GH DIAP RK D Sbjct: 153 VENVNKGFVGKESEYPNWFTFDKKQIRSLGTLSQYIVNSYNIAPQNVVGHADIAPTRKQD 212 Query: 165 PGPAFDWARF 174 PG F W + Sbjct: 213 PGILFPWEKL 222 >UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoarcus sp. BH72 RepID=A1K6E1_AZOSB Length = 286 Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 51/152 (33%), Positives = 66/152 (43%), Gaps = 41/152 (26%) Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL----- 117 F + RVSAH L+ DG I Q+V F+ RAWHAGVS+++ N SIG+E+ Sbjct: 53 FMNASGNRRVSAHLLVDSDGSITQFVDFNLRAWHAGVSEWEDYRDLNSHSIGVEIVNYGY 112 Query: 118 -----EGTDTL-----------------------------AYTDAQYQQLAAVTRALIDC 143 G TL A+T Q + A+ L D Sbjct: 113 LLKNSAGGFTLSNGRSSPFTPAEVVEARHRKEAVRHQYWHAFTPEQLETCEALVEVLFDA 172 Query: 144 YPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 Y ++ GH DIAP RK DPGPAF R + Sbjct: 173 YA--LSDVLGHDDIAPTRKVDPGPAFPMDRIK 202 >UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Gammaproteobacteria RepID=Q15N79_PSEA6 Length = 818 Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 65/131 (49%), Gaps = 31/131 (23%) Query: 72 VSAHCLI---------RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL----- 117 +SAH LI + EI++ V DKRAWHAG S +QGR ND SIGIE+ Sbjct: 66 LSAHYLIPESNDPSYPKDSLEILKLVDEDKRAWHAGNSVWQGRSELNDSSIGIEIVNVPE 125 Query: 118 ------------EGTDTLA----YTDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPD 160 G + L Y Q + L A+++ ++ PDI+ + GH DIAP Sbjct: 126 CHFDKEANTTSEHGENRLCVFPDYDPKQIELLIALSQQILARNPDISPTKVVGHSDIAPS 185 Query: 161 RKTDPGPAFDW 171 RK DPGP F W Sbjct: 186 RKNDPGPRFPW 196 >UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax=Proteobacteria RepID=A6UZQ6_PSEA7 Length = 291 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/120 (41%), Positives = 64/120 (53%), Gaps = 21/120 (17%) Query: 73 SAHCLI--------RRDG----EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL--- 117 SAH L+ RR G I V + RAWHAGVS + GRE ND SIGIE+ Sbjct: 81 SAHYLVPSPADASYRRAGFSGQRIFNLVDENDRAWHAGVSSWGGREGLNDSSIGIEIVNL 140 Query: 118 ----EGTDTLA-YTDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAFDW 171 +G T Y +Q + L + R ++ YPDI+ K++ GH DIA RK+DPGP W Sbjct: 141 ARDDDGVFTFPDYEPSQIEALRQLARNILQRYPDISPKHVLGHSDIAVGRKSDPGPKLPW 200 >UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacteria RepID=D2AU78_STRRD Length = 508 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 13/118 (11%) Query: 71 RVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTD 127 +VSAH ++R DG++ Q V RAWHA N S+GIE EG D +TD Sbjct: 263 QVSAHYVVRSSDGDVTQMVREKDRAWHA--------RDWNSRSVGIEHEGYVNDASWFTD 314 Query: 128 AQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 A Y+ AA+TR + D Y P ++ GH ++ + TDPGP +DW R+ V+ TT Sbjct: 315 AMYRSSAALTRNIADRYGIPKDRAHIVGHVEVPGNDHTDPGPNWDWTRYMQYVNGTTT 372 >UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aeromonas RepID=A4SRC8_AERS4 Length = 273 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 67/139 (48%), Gaps = 20/139 (14%) Query: 52 FTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGE-----IVQYVPFDKRAWHAGVSQYQGRE 106 +T D + E AH +VSAH LI RD + + Q VP +RAWHAG S++ Sbjct: 44 YTDEDDAHSLRLLTEPAH-QVSAHYLIPRDTDQTPLPVYQLVPDSQRAWHAGRSRWHQYA 102 Query: 107 RCNDFSIGIELEG-----TDTL---------AYTDAQYQQLAAVTRALIDCYPDIAKNMT 152 N SIGIE+ D L YT AQ + A+T+ L+ Y + Sbjct: 103 GLNASSIGIEIVNLGYPPEDALLPAHQRRWQPYTQAQIAAIGALTQKLVQRYRIPPTQVL 162 Query: 153 GHCDIAPDRKTDPGPAFDW 171 H D+AP+RK DPGP F W Sbjct: 163 AHSDVAPERKQDPGPHFPW 181 >UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5 Tax=Bacteria RepID=A5WCW3_PSYWF Length = 308 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 61/127 (48%), Gaps = 23/127 (18%) Query: 71 RVSAHCLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL----------- 117 VSAH LI D I Q VP ++RAWHAG + GR ND SIGIE+ Sbjct: 90 NVSAHYLIPITDDKPIYQLVPDNQRAWHAGQGSFAGRSILNDTSIGIEIVNEGIQQQFRK 149 Query: 118 -EGTDT---------LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGP 167 + TD + +TD Q +++A + + L Y + GH D+AP RK DPG Sbjct: 150 AKNTDNDGYHPAEHYVEFTDIQIKKIAQLVQDLAQKYEIEPTLIIGHSDMAPSRKIDPGA 209 Query: 168 AFDWARF 174 F W R Sbjct: 210 KFPWERL 216 >UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphingobacterium spiritivorum RepID=C2G1S0_9SPHI Length = 297 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 53/108 (49%) Query: 67 IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYT 126 + H +VSAH LI + GE+ Q + R WHAG S++ N S+GIEL+ ++ Sbjct: 118 LEHTKVSAHYLIGKKGEVYQLLNDYLRGWHAGASKWGSVTDMNSVSLGIELDNNGREPFS 177 Query: 127 DAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 D Q L + L Y N GH DIAP RK DP F W + Sbjct: 178 DVQINALLTLLDTLKTNYDIPTANFIGHGDIAPTRKNDPSIFFPWKKL 225 >UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xanthomonadaceae RepID=Q3BNF4_XANC5 Length = 268 Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 72/166 (43%), Gaps = 23/166 (13%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTG--TIDPQAHPFFAEIA 68 A+ VPSP+YD R P L+V+H FT ++ + Sbjct: 37 AQWVPSPNYDTR----RPILIVLH-----------------FTDQQSVRQSLSTLRGRNS 75 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDA 128 RVSAH LI DG+ Q V +RAWH G ++ N SIGIEL+ + + A Sbjct: 76 GGRVSAHYLIGEDGQRYQLVSDGQRAWHGGAGRWGTITDINSASIGIELDNDGSEPFAPA 135 Query: 129 QYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 Q L + L + GH D+AP RK DPGP F W R Sbjct: 136 QIDSLLVLLDDLCQRLRIPRTQIVGHEDVAPTRKNDPGPLFPWKRL 181 >UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacteria RepID=C6X3P6_FLAB3 Length = 342 Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 12/120 (10%) Query: 67 IAHLRVSAHCLIRR--DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG----T 120 + VS+H L+ D EI Q V +KR++HAG+S ++ ND SIGIE+ T Sbjct: 124 LTQQSVSSHYLVNNLGDREIYQLVDENKRSYHAGISTWRNDSMLNDTSIGIEIVNAGYVT 183 Query: 121 DTLA------YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 D+ + + Q +++AA+ + + Y N+ H DIAP RK DPGP F W + Sbjct: 184 DSTGVKIFPGFDEGQVKKVAALVKDIAGRYMIPPTNILAHSDIAPTRKQDPGPKFPWKKL 243 >UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HXI6_9SPHI Length = 299 Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 53/101 (52%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQY 130 +VS+H +I +DG IVQ + R+WHAG ++ N SIGIEL+ + +AQ Sbjct: 103 QVSSHYVIAKDGTIVQMLNDYLRSWHAGRGKWGSVTDLNSVSIGIELDNNGFEPFPEAQI 162 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 + L + + L Y N GH DIAP RK DP F W Sbjct: 163 ESLLILCKRLKWKYGIPTANFIGHSDIAPSRKVDPNRFFPW 203 >UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protein n=19 Tax=Proteobacteria RepID=A4VRS8_PSEU5 Length = 262 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 11/114 (9%) Query: 72 VSAHCLIRRD-GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL--EGTDTLA---- 124 VS+H LI I + V D+RAWHAG S++ GR N SIGIEL +G + A Sbjct: 59 VSSHYLIGESPATIYRLVDEDRRAWHAGESEWNGRTWLNATSIGIELVNQGYEQSADGRR 118 Query: 125 ----YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 Y+ AQ L + + ++ + + GH DIAP RK DPGP F W R Sbjct: 119 LWYPYSQAQIDALVVLLKDIMARHGLKPGAIIGHSDIAPQRKVDPGPLFPWKRL 172 >UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ES14_OCEIH Length = 234 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 63/130 (48%), Gaps = 27/130 (20%) Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG----RERCNDFSIGIEL---------- 117 VS H +I R GEI ++V D+ A+HAG + +G N +SIGIEL Sbjct: 99 VSTHYVIDRTGEIYRFVSEDRNAYHAGEGKIEGVPKYENNMNRYSIGIELLAIGTKEEMM 158 Query: 118 -----EGTDTLA-----YTDAQYQQLAAVTRALIDCYPDIAKN---MTGHCDIAPDRKTD 164 E DT++ YTD QY L + + + + N + GH + AP+RKTD Sbjct: 159 PMMSPELYDTISSKHIGYTDKQYDALQDLLIDISSRHHKLKLNRNHIIGHQEYAPERKTD 218 Query: 165 PGPAFDWARF 174 PG FDW R Sbjct: 219 PGALFDWERL 228 >UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Bacillus cereus 03BB108 RepID=B3ZYJ5_BACCE Length = 246 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 27/129 (20%) Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAG---VSQY-QGRERCNDFSIGIELEGTDT----- 122 +SAH LI R+G + Q V ++ A+HAG +S Y + + N++SIGIEL G T Sbjct: 114 LSAHYLIDRNGVVYQLVNENRVAYHAGKGSISNYPEYTNKLNEYSIGIELLGIGTWKEME 173 Query: 123 ---------------LAYTDAQYQQLAAVTRALIDCYPDIAKN---MTGHCDIAPDRKTD 164 + YTD QY+ L + + +I + + GH + A DRKTD Sbjct: 174 IMMSRDTYDLISPHNIGYTDVQYKSLKLLLEDIRKRNQNIQNDREHILGHDEYAKDRKTD 233 Query: 165 PGPAFDWAR 173 PG FDW++ Sbjct: 234 PGSLFDWSK 242 >UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protein n=8 Tax=Proteobacteria RepID=Q3JK19_BURP1 Length = 454 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 20/124 (16%) Query: 71 RVSAHCLI------RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE-------- 116 +VSAH L+ R ++ + VP +RAWHAGVS +QG N S+GIE Sbjct: 209 QVSAHYLVPDAADDGRRFKVFELVPQARRAWHAGVSYWQGDRMLNAGSVGIEIVNLGFPP 268 Query: 117 ------LEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD 170 L Y DAQ A+ ++ + + + GH D+AP RKTDPGP F Sbjct: 269 EDENLPLMNRRWYPYPDAQVAVFGALAADVVAQHQVLPHKVVGHSDVAPGRKTDPGPLFP 328 Query: 171 WARF 174 W + Sbjct: 329 WKKL 332 >UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SAT8_9ACTO Length = 516 Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 59/112 (52%), Gaps = 11/112 (9%) Query: 72 VSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-TDTLA-YTDA 128 SAH L+R DG + Q V AWHAG Y N SIGIE EG D+ + YTDA Sbjct: 266 TSAHYLLRSSDGAVTQMVRDKDIAWHAGNWTY------NTQSIGIEHEGYVDSASWYTDA 319 Query: 129 QYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 Y+ AA+TR L D Y P N+ GH + TDPGP ++W + LV Sbjct: 320 MYRSSAALTRFLCDKYGIPKTRNNIIGHNQVPGATHTDPGPNWNWTYYMQLV 371 >UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Providencia RepID=D1P770_9ENTR Length = 295 Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 16/117 (13%) Query: 71 RVSAHCLI-----RRDGE--IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL------ 117 +VS+H LI +++G+ I+Q VP +AWHAG S++Q ND SIGIE+ Sbjct: 63 KVSSHYLIPSQPEQKNGQPVILQLVPERLKAWHAGDSRWQYHHSLNDNSIGIEIVNEGLV 122 Query: 118 --EGTDTLA-YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 G D + D+Q L + ++ Y +N+ GH DIAP RK DPG AF W Sbjct: 123 RKNGQDIWQPFNDSQIDALIPLLSDIMQRYGIPPENVIGHSDIAPLRKQDPGRAFPW 179 >UniRef50_C4SAC3 Negative regulator of beta-lactamase expression n=4 Tax=Proteobacteria RepID=C4SAC3_YERMO Length = 209 Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 51/104 (49%), Gaps = 9/104 (8%) Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL-------EGT-DTLAYTDAQYQ 131 D I V + RAWHAGVS + R ND SIGIE+ EG D Y Q Sbjct: 15 NDMRIFNLVDENARAWHAGVSSWAERTNLNDTSIGIEIVNLASDKEGVWDFPPYPIEQIA 74 Query: 132 QLAAVTRALIDCYPDIAK-NMTGHCDIAPDRKTDPGPAFDWARF 174 + + ++ YPDI N+ H DIAP RK+DPGP F W Sbjct: 75 AVKQLAANILQRYPDITPVNVVAHSDIAPTRKSDPGPMFPWQEL 118 >UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A62BF Length = 214 Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 55/114 (48%), Gaps = 10/114 (8%) Query: 68 AHLRVSAHCLIRRDGEIV-QYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL--------- 117 AH V A I +V Q VP +RAWHAGVS +QG N SIGIE Sbjct: 71 AHYVVPAQPRIEWGKPVVYQLVPEAQRAWHAGVSAWQGATELNAASIGIENVNGGPADTP 130 Query: 118 EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 +G Y Q L +++ ++ Y + GH DIAP RK DPGPAF W Sbjct: 131 QGRTWQPYPPEQVDALIRLSQDIVARYAIPPTRVVGHSDIAPQRKIDPGPAFPW 184 >UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-like protein n=4 Tax=Actinomycetales RepID=D2AQX4_STRRD Length = 467 Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 11/113 (9%) Query: 72 VSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDA 128 VSAH ++R DG + Q V AWHAG Y R S+GIE EG +D +TDA Sbjct: 263 VSAHYVVRSSDGAVTQMVRDKDVAWHAGNWSYNTR------SVGIEHEGYVSDASWFTDA 316 Query: 129 QYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 Y+ AA+TR + D Y P ++ GH + TDPGP +DW R+ V+ Sbjct: 317 MYRSSAALTRHIADRYGIPKDRAHIIGHNQVPGATHTDPGPYWDWNRYMQYVT 369 >UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PRR2_CHIPD Length = 275 Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 52/104 (50%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQY 130 +VSAH +I +DG I + RAWHAG++++ N SIGIEL+ + Q Sbjct: 97 QVSAHYVICKDGTINHMLNDYLRAWHAGIAKWGNVTDMNSCSIGIELDNNGLTPFQPQQI 156 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L + +L + A N GH DIAP RK DP F W + Sbjct: 157 NSLLVLLDSLKHRFNIPAANFIGHGDIAPGRKVDPSAWFPWQQL 200 >UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0F4W8_9RHOB Length = 238 Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 22/164 (13%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PSP++ R P+++V+H ++ + DA+ DP++ VSA Sbjct: 11 PSPNFGIRRGGVIPSMIVLHYTAMKSSK------DAI-QRLSDPKSE----------VSA 53 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLA 134 H LI G++ Q V KRAWHAG + N +SIGIEL+ + A + +Q++ Sbjct: 54 HYLIDEAGKVTQLVDEQKRAWHAGQGCWGEINDINSYSIGIELDYCPS-AKCNFDERQIS 112 Query: 135 AVTRALIDCYPDIA----KNMTGHCDIAPDRKTDPGPAFDWARF 174 ++ + L D + + + H D+AP RK DPG F W + Sbjct: 113 SLEKLLFDILKRRSEIRPEFIIAHSDMAPGRKFDPGMYFPWKKL 156 >UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protein n=59 Tax=Proteobacteria RepID=A1V4B3_BURMS Length = 314 Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 57/126 (45%), Gaps = 16/126 (12%) Query: 62 PFFAEIAHLRVSAHCLI------RRDGEIV-QYVPFDKRAWHAGVSQYQGRERCNDFSIG 114 P + VSAH ++ R +V Q VP +RAWHAGVS +QG N SIG Sbjct: 75 PSLRVLTQENVSAHYVVPDAPRTERGAPVVYQLVPESERAWHAGVSAWQGATELNGVSIG 134 Query: 115 IEL---------EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 IE G Y AQ + + + ++ Y + GH DIAP RK DP Sbjct: 135 IENVNRGPIDTPHGRMWAPYPPAQVDAIVRLAKDIVARYRIPPTRVVGHSDIAPQRKIDP 194 Query: 166 GPAFDW 171 GP F W Sbjct: 195 GPLFPW 200 >UniRef50_A4WS28 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Rhodobacteraceae RepID=A4WS28_RHOS5 Length = 290 Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 40/145 (27%) Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA------- 124 VS H ++ DG +VQ VP ++RA HAG S + GR CNDFSIGIE+ + Sbjct: 53 VSVHFVVEIDGTVVQQVPTNRRAGHAGKSSFHGRTGCNDFSIGIEIVNPGRMTRLSDAQC 112 Query: 125 ------------------------------YTDAQYQQLAAVTRALIDCYPDIAKNMTGH 154 Y +AQ + + R+L D P + +++T H Sbjct: 113 AAWYGETFATNLFGIREVETPQHGRGLWMPYPEAQMTAVLDLLRSLFDGIPTL-RDITTH 171 Query: 155 CDIAPDRKTDPGPAF--DWARFRVL 177 ++P RK D P F + R R+L Sbjct: 172 WYVSPGRKVDTNPLFPLEHVRARIL 196 >UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Chloroflexus RepID=B8GD95_CHLAD Length = 641 Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 7/109 (6%) Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRER----CNDFSIGIELEGTDTL--AY 125 VS H I + G+I Q V AWHAGVS+++ R CN+ S+GIELE + Y Sbjct: 51 VSVHYYITKRGQIFQLVADHDIAWHAGVSRWEVDGRTVYGCNEVSLGIELENRNDGRDPY 110 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 QY + R L+ Y + H DI+P RKTDP F W +F Sbjct: 111 PPEQYAAALWLVRELVQKYHIPPNQVVRHLDISPGRKTDPA-GFPWQQF 158 >UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Roseiflexus RepID=A5UR54_ROSS1 Length = 419 Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 5/108 (4%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA--YTDA 128 RVSAH LI + G+I + VP + AWHAG + ++G ND S+GIELE + Y Sbjct: 47 RVSAHYLIDKAGQIYRLVPDEYAAWHAGRAAWRGETAINDISLGIELENANNGRDPYPAT 106 Query: 129 QYQQLAAVTRALIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWARF 174 Q + L +TR + Y + H DIA RK+DP F W F Sbjct: 107 QMESLVQLTRDKVAQYRIAPDMVVRHLDIAIPRGRKSDPA-GFPWNDF 153 >UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZI0_9ACTO Length = 455 Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 19/136 (13%) Query: 52 FTGTIDPQAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCND 110 +TGTI +F A +VSAH +IR DG++ Q V AWHA N Sbjct: 250 YTGTIS-----WFKNPAS-QVSAHYVIRSSDGQVTQMVAEKDTAWHA--------RSTNP 295 Query: 111 FSIGIELEG-TDTLA-YTDAQYQQLAAVTRALID--CYPDIAKNMTGHCDIAPDRKTDPG 166 +++GIE EG D + +TDA Y+ AA+TR++ D P ++ GH ++ + TDPG Sbjct: 296 YTVGIEHEGWVDQPSWFTDAMYRSSAALTRSIADRRGIPKDRAHIRGHNELPDNDHTDPG 355 Query: 167 PAFDWARFRVLVSKET 182 P ++W + LV+ T Sbjct: 356 PNWNWTYYMQLVNGGT 371 >UniRef50_B1ESE3 Regulates AmpC n=1 Tax=Escherichia albertii TW07627 RepID=B1ESE3_9ESCH Length = 49 Score = 65.1 bits (157), Expect = 9e-10, Method: Composition-based stats. Identities = 26/27 (96%), Positives = 26/27 (96%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDET 27 MLLEQGWLVGARRVPSPHYDCRPD ET Sbjct: 1 MLLEQGWLVGARRVPSPHYDCRPDSET 27 >UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN01_9RICK Length = 159 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 59/121 (48%) Query: 52 FTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDF 111 +TG D ++ + +VS H LI R G++ Q V AWHAG S++ N Sbjct: 28 YTGMRDQKSAIKRLQSKVAKVSCHYLISRGGKVYQMVQDLDVAWHAGKSKWGKDINLNSK 87 Query: 112 SIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 SIGIEL ++ + Q L + + L Y + GH DI+P RKTDPGP F W Sbjct: 88 SIGIELVNKGFESFPNKQILALIKILKILKKKYKIKPSYVLGHEDISPGRKTDPGPKFPW 147 Query: 172 A 172 Sbjct: 148 K 148 >UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VV46_9PROT Length = 238 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 78/169 (46%), Gaps = 30/169 (17%) Query: 14 VPSPHYDCRPDDETP-TLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 +PSP+Y R + TP TL+V+H +P E +D L DP+A V Sbjct: 8 LPSPNYSSR--EGTPITLVVLHYTGMPSAEEA---LDRLR----DPEAG----------V 48 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL-AYTDAQYQ 131 S+H I +DG IV+ V RA HAG+ + N SIGIE+ L Y D Sbjct: 49 SSHYFIEQDGRIVRLVDEKDRAHHAGLGAWGPVRDVNSASIGIEIVNKGHLWGYEDFPDL 108 Query: 132 QLAAVTRALIDCYPDIAKNMTG------HCDIAPDRKTDPGPAFDWARF 174 Q+ A+ + + Y ++ G H D+AP RK DPG F W R Sbjct: 109 QIDALIGLMTEIY---RRHRLGPLAAIAHSDLAPARKDDPGERFPWDRL 154 >UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Streptomyces RepID=D1WWE1_9ACTO Length = 519 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 13/116 (11%) Query: 71 RVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-TDTLA-YTD 127 +VSAH IR DGE+ Q V AWHAG N S+GIE EG D A YT+ Sbjct: 261 KVSAHYTIRSSDGEVTQSVLEKDTAWHAG--------STNSSSVGIEHEGYVDNPAWYTE 312 Query: 128 AQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 A Y+ A +T+ L Y P ++ GH + TDPGP +DW + L+ E Sbjct: 313 AMYRSSAELTKHLAARYGIPKNRSHIIGHSEAPGADHTDPGPNWDWNHYMELIDGE 368 >UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orientia tsutsugamushi RepID=A5CBZ0_ORITB Length = 366 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 25/170 (14%) Query: 18 HYDCRPDDETPTLLVVH----NISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 HY R D + L++H N S EF ++ G + +H E + Sbjct: 94 HYTQRNQDTSIKYLIMHYTVCNFSSTAQEFT---VNKPLLGQVS--SHIVITEAEEGKTP 148 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL--EGTDT-------LA 124 A G ++ +VP +K A+HAGVS +Q N SIGIE G +T + Sbjct: 149 A-------GILISFVPENKIAYHAGVSAWQNDTNLNSMSIGIEHVNRGFNTVNAKKEWVC 201 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 Y Q V+ +I Y ++ GH DIA +RK+DPGP F W + Sbjct: 202 YDKHQIATSGIVSSGIIRRYNIKPIHVLGHSDIAYNRKSDPGPLFPWGQL 251 >UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-like protein n=2 Tax=Streptosporangium roseum DSM 43021 RepID=D2BEW5_STRRD Length = 480 Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 13/113 (11%) Query: 71 RVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-TDTLA-YTD 127 +VSAH ++R DG++ Q V RA+HAG N S+GIE EG D + +TD Sbjct: 260 QVSAHYVVRSSDGDVTQMVREKNRAFHAG--------SFNRRSVGIEHEGYVDNASWFTD 311 Query: 128 AQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 A Y+ AA+TR + D Y P ++ GH + TDPGP ++W ++ V Sbjct: 312 AMYRSSAALTRNIADRYGIPKDRAHIVGHHQVPGTDHTDPGPNWNWTKYMQFV 364 >UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Desulfitobacterium hafniense RepID=B8FYR6_DESHD Length = 242 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 12/122 (9%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQ------YQGRERCNDFSIGIELEGTDTLA 124 + S+H L+ +DG I+Q V + AWHAG+ Y G+ N ++IGIE E + Sbjct: 45 QASSHYLVLKDGRILQLVKDEDTAWHAGLVNKPNWKLYNGK-NPNLYTIGIEHEALEGEG 103 Query: 125 YTDAQYQQLAAVTRALIDCYPDI---AKNMTGHCDI-APDRKTDPGPAFDWAR-FRVLVS 179 TDAQYQ + L+ +P I + ++ GH + +R DPG F W + F+ L S Sbjct: 104 LTDAQYQSTLWLHGQLLAKFPAIKPDSDHIIGHYRTDSVNRPNDPGAKFPWEQLFKDLKS 163 Query: 180 KE 181 K+ Sbjct: 164 KD 165 >UniRef50_C0A8M7 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A8M7_9BACT Length = 141 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 58/120 (48%), Gaps = 19/120 (15%) Query: 67 IAHL-----RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 IAH+ +VS H LI DG + V + AWHAG S + GR RCNDF +G+ G Sbjct: 7 IAHMLRPESQVSYHVLIATDGVRARLVADEHIAWHAGASNFLGRTRCNDFLLGVSFAGNT 66 Query: 122 TLA-YTDAQYQQLAAVTRALIDCYPD-IAKN-----MTGHCDIAPDRKTDPGPAFDWARF 174 L T+AQ + AL P A+ MT H IAP RK D PA +W R Sbjct: 67 RLTPLTEAQ------IASALDWLAPRWFARGWTPAVMTDHRQIAPGRKDDLFPA-EWMRL 119 >UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3QCK8_RHOPT Length = 464 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 63/154 (40%), Gaps = 51/154 (33%) Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL--------------- 117 SAH +I RDG I Q F+ + WHAG+S ++GR N +++GIE+ Sbjct: 63 SAHVVIGRDGTITQLAAFNVKTWHAGISNWRGRANLNGWAVGIEIVNPGGPLRTLGNGRY 122 Query: 118 EGTDT---------------------------------LAYTDAQYQQLAAVTRALIDCY 144 +G D L ++ Q + + RAL+ Y Sbjct: 123 QGIDLIDTKADPSLKVRPGVFPPLTPDGKAVPRTAGYWLEHSPEQIDAVVELCRALVAAY 182 Query: 145 PDIAKNMTGHCDIAPDRKTDPGPAF--DWARFRV 176 P I + +T H IAP RK D P F D R RV Sbjct: 183 PTITEIVT-HWMIAPTRKVDTNPLFPIDEVRRRV 215 >UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protein n=62 Tax=Proteobacteria RepID=A1UW52_BURMS Length = 341 Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 55/123 (44%), Gaps = 26/123 (21%) Query: 72 VSAHCLIRRDGE------IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 VSAH L+ + + VP RAWHAGVS +QG N SIG+E+ T + Sbjct: 98 VSAHYLVPDAADAGTLFRVYALVPETNRAWHAGVSYWQGERLLNASSIGVEIVNT---GF 154 Query: 126 TDAQYQ--------------QLAAVTRALIDC---YPDIAKNMTGHCDIAPDRKTDPGPA 168 DA Q+A V R D + + + GH DIAP RK DPGP Sbjct: 155 PDADENAPLMRRRWAPFPDAQMAVVGRLAADIAARHEIPPQKVVGHSDIAPGRKLDPGPL 214 Query: 169 FDW 171 F W Sbjct: 215 FPW 217 >UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAP2_9GAMM Length = 303 Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 59/137 (43%), Gaps = 36/137 (26%) Query: 71 RVSAHCLIRRDGE---------IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL---- 117 VS+H LI G+ + + V RAWHAGVS +QGR ND SIGIEL Sbjct: 57 EVSSHYLIPEQGDASYPKSHLAVYRLVDEQHRAWHAGVSHWQGRSNINDQSIGIELINRA 116 Query: 118 ----------EGTDTLAYTD------------AQYQQLAAVTRALIDCYPDI-AKNMTGH 154 E + A+ D Q Q L +++ ++ PDI + GH Sbjct: 117 ACAHQPQVLTEIAPSAAFFDNQTFCQYPNFDLQQIQLLIELSKDILARNPDIDPTAVVGH 176 Query: 155 CDIAPDRKTDPGPAFDW 171 DI K DPGP F W Sbjct: 177 SDIQLGNKQDPGPHFPW 193 >UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO Length = 200 Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 11/114 (9%) Query: 71 RVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-TDTLAY-TD 127 +V+AH ++R DG + Q V AWHAG Y R SIGIE EG D Y TD Sbjct: 91 QVTAHYVVRSADGHLAQCVREKDVAWHAGNWDYNTR------SIGIEHEGWVDRPEYFTD 144 Query: 128 AQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 A ++ AA+T ++ + Y P +++ GH ++ TDPG +DW ++ LV+ Sbjct: 145 AMFEASAALTASVCERYGVPKDREHILGHVEVPGTDHTDPGALWDWTKYLRLVN 198 >UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARF9_RUBXD Length = 496 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 11/113 (9%) Query: 71 RVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTD 127 +VSAH +R DG+I Q V AWHAG Y N SIGIE EG + +TD Sbjct: 247 QVSAHYTVRSSDGKIGQSVREADIAWHAGNWDY------NTHSIGIEHEGYVSQKRWFTD 300 Query: 128 AQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 A Y+ A + L Y P K++ GH + TDPGP ++W R+ LV Sbjct: 301 AMYRSSARLAAYLCKKYRIPIDRKHIIGHNQVPGADHTDPGPYWNWDRYMRLV 353 >UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9 Tax=Wolbachia RepID=C0R4G3_WOLWR Length = 525 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 20/119 (16%) Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGV--------SQYQGRERCNDFSIGIELEGTDTL 123 +S H ++ RDG I VP +K AWHAG+ S+ + + N++S+GIE+ T Sbjct: 125 LSVHFIVDRDGNITLMVPLEKEAWHAGISYARVKVDSKLEELRKLNNYSVGIEIVNTGLE 184 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMT-GHCDIA-----PD-----RKTDPGPAFDW 171 + + Q + + + L++ + I ++M H +I P+ RK DP FDW Sbjct: 185 PFPEEQMRSVKELILYLMERFK-IKRDMIFSHSEIGTIVYDPELGYTMRKPDPHKLFDW 242 >UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces sp. ACTE RepID=D1XLT9_9ACTO Length = 444 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 56/125 (44%), Gaps = 19/125 (15%) Query: 71 RVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---YT 126 + SAH ++R DG + Q V AW AG N SIGIE EG YT Sbjct: 103 KTSAHYVVRSADGHVTQMVKNKDVAWQAG------NWYLNTHSIGIEQEGVAAEGAKWYT 156 Query: 127 DAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKT-------DPGPAFDWARFRVL 177 DA Y+ A + R L Y P +++ GH + P DPGP +DW RF L Sbjct: 157 DAMYRSTARLVRHLAAVYDIPLDRQHILGHDGVPPTSAAGTQNMHWDPGPYWDWNRFMAL 216 Query: 178 VSKET 182 + + T Sbjct: 217 LGRPT 221 >UniRef50_A6GHP2 Putative amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHP2_9DELT Length = 454 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 15/115 (13%) Query: 71 RVSAHCLIRRD-GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTD 127 VSAH ++R D GE+ Q V RAWH G S N ++IGIE EG + YT Sbjct: 78 NVSAHFVVRSDDGEVTQMVELADRAWHVGGS--------NAYAIGIEHEGWIDEPAWYTW 129 Query: 128 AQYQQLAAVTRALIDCYPDIAKN---MTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 Y + +TR D DI KN + GH ++ TDPG ++W + LV+ Sbjct: 130 EMYVSSSQLTRWTADEL-DIPKNRDHIVGHVELPNQSHTDPGIHWNWDLYMALVN 183 >UniRef50_A4NW45 N-acetyl-anhydromuranmyl-L-alanine amidase n=1 Tax=Haemophilus influenzae 22.4-21 RepID=A4NW45_HAEIN Length = 58 Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALF 52 +EQG ++ R++ SPH+D RP+ + +LLV+H ISLPP +FGG ++D F Sbjct: 7 IEQG-ILDCRQIQSPHFDKRPNPQDISLLVIHYISLPPEQFGGGYVDDFF 55 >UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDD4_9DELT Length = 574 Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 32/173 (18%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 SP+Y RP P ++++H+ G + G W + + QA VSAH Sbjct: 231 SPNYSNRPGGTNPEMVIIHSCE---GSYSGCW-----SWLSNSQAG----------VSAH 272 Query: 76 CLIRRDG-EIVQYVPFDKRAWHAGVS---QYQGRERCN-------DFSIGIELEG-TDTL 123 +I G E+ Q V +K+AWH G S +CN +F+IGIE G + Sbjct: 273 YVINNSGSEVSQLVRENKKAWHIGASYNCSLNNSTKCNKNGSSSNNFTIGIEHAGYANQA 332 Query: 124 AYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 ++++ A + + + P ++ H + P + DPGP + WA + Sbjct: 333 SWSNGLITTSAELVCDITQAWGIPRDQYHIVAHGTLQPYNRIDPGPNWPWANY 385 >UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Synechococcus elongatus RepID=Q31KQ2_SYNE7 Length = 317 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 23/124 (18%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE---------RCNDFSIGIELE--- 118 + S H LIRR+G IV VP +KRA+ AG S ++G N+FS+ + LE Sbjct: 167 QASYHALIRRNGTIVYTVPPEKRAFGAGSSSFRGEAVRFNPKLPGSVNNFSLHVSLESPA 226 Query: 119 -GTDTL----AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDR---KTDPGPAFD 170 G D YT QY LA + + + Y +T H + DR + DP +F Sbjct: 227 DGRDNRRRHSGYTARQYDSLALLAQQWMTTYTIPGDRITTHAAV--DRSGSRMDPR-SFQ 283 Query: 171 WARF 174 WAR Sbjct: 284 WARL 287 >UniRef50_A9AXU4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXU4_HERA2 Length = 748 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/119 (36%), Positives = 55/119 (46%), Gaps = 19/119 (15%) Query: 73 SAHCLIR-RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---YTDA 128 S H +IR DG I Q V WHAG N SIGIE EG Y++A Sbjct: 298 STHYVIRASDGHIAQMVENKNVPWHAG------NWDVNGHSIGIEHEGIAIEGATWYSEA 351 Query: 129 QYQQLAAVTRALIDCY--PDIAKNMTGHCDI---APDRKT----DPGPAFDWARFRVLV 178 YQ A +TR L D Y P ++ GH ++ P + DPGP +DWA + LV Sbjct: 352 MYQASAQLTRYLADKYQIPLDRSHIIGHDELPGPLPQHQAGMHWDPGPFWDWAHYMDLV 410 >UniRef50_C4DNA4 Negative regulator of beta-lactamase expression n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNA4_9ACTO Length = 330 Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 12/118 (10%) Query: 72 VSAHCLIRRD-GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTD 127 V+ H L+ G + Q V AWHAG Y N SIGIE EG YT Sbjct: 88 VTTHYLVSSSKGSVTQMVHESDIAWHAGNWDY------NKTSIGIEHEGYVQDPKKWYTT 141 Query: 128 AQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 Y+ A + R++ D Y P K++ H ++ TDPG ++W R+ LV + T Sbjct: 142 NMYESSARLVRSICDRYNIPMDRKHIIAHSEVPGATHTDPGKGWNWDRYMDLVRESKT 199 >UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4Q5_ACIDE Length = 230 Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%) Query: 104 GRERCNDFSIGIEL-EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRK 162 G R N +S+GIE+ ++D Q + A + R YP++ K++ H + P R+ Sbjct: 119 GAGRVNHWSLGIEVVNAQKNDPFSDWQIEATARIVRYCWAKYPNL-KHVVSHAKLDPGRR 177 Query: 163 TDPGPAFDWARFRVLV 178 +DPG FDW RF+ LV Sbjct: 178 SDPGEHFDWLRFKSLV 193 >UniRef50_Q5Z3U1 Putative uncharacterized protein n=1 Tax=Nocardia farcinica RepID=Q5Z3U1_NOCFA Length = 270 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 64/146 (43%), Gaps = 9/146 (6%) Query: 41 GEFGGPW-IDALFTGTIDPQAHP-FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAG 98 G+FG W + A TG+ P +P A+ L +++ + RDG V V AWHAG Sbjct: 30 GDFGEIWGVIAHHTGSNPPSNNPGHIAQHPQLGLASQLHLSRDG--VYTVCGVGIAWHAG 87 Query: 99 VSQYQG--RERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCD 156 Y G N +IGIE E T ++ QY A++ A N+ GH + Sbjct: 88 NGSYPGLPTNDANRVTIGIEAENNGTEGWSPRQYTAYVKGVAAILRKLGKGAGNVIGHKE 147 Query: 157 I--APDRKTDPGPAFDWARFRVLVSK 180 A K DPG D RFR V K Sbjct: 148 WAGAAQGKWDPG-GMDMNRFRADVQK 172 >UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9N2Y5_9ACTO Length = 443 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 19/125 (15%) Query: 71 RVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---YT 126 + SAH ++R DG + Q V AW AG N SIGIE EG YT Sbjct: 102 QTSAHYVVRSADGHVTQMVKNKDVAWQAG------NWYLNTHSIGIEQEGVAAEGATWYT 155 Query: 127 DAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKT-------DPGPAFDWARFRVL 177 Y+ A + R L Y P +++ GH + P DPGP +DW RF L Sbjct: 156 SEMYRSTARLVRYLAAKYDIPLDRQHILGHDGVPPTSAAGTKNMHWDPGPYWDWNRFMAL 215 Query: 178 VSKET 182 + T Sbjct: 216 LGAPT 220 >UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NVA7_SODGM Length = 201 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 9/84 (10%) Query: 97 AGVSQYQGRERCNDFSIGIELEGTDTLA--------YTDAQYQQLAAVTRALIDCYPDIA 148 A S + GR ND SIGIE ++ Y Q + + + ++ YPDI Sbjct: 42 AAFSAWAGRNNLNDTSIGIENVNLASVKNGKLIFPPYHPVQIAAIIQLAQDILQRYPDIT 101 Query: 149 -KNMTGHCDIAPDRKTDPGPAFDW 171 + GH D+AP RK DPG AF W Sbjct: 102 PTQIIGHSDVAPGRKFDPGAAFPW 125 >UniRef50_A8LCD7 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Frankia RepID=A8LCD7_FRASN Length = 361 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 8/66 (12%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQY 130 +VSAH + + GE QYVPFD+RAW +Q G N F I +E EG D+ YT Q Sbjct: 143 QVSAHLWLSKAGEFEQYVPFDRRAW----AQAAG----NPFWISVECEGYDSEDYTAIQV 194 Query: 131 QQLAAV 136 Q+L + Sbjct: 195 QRLGEL 200 >UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=19 Tax=Streptomyces RepID=D1X7T3_9ACTO Length = 249 Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 11/125 (8%) Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--T 120 F + AH + + H ++ +DG +VQ + A+ AG Y N+ ++GIE EG Sbjct: 119 VFQDPAH-QAATHYIVGQDGRVVQMIRELDVAYQAGNRAY------NERAVGIEHEGFVD 171 Query: 121 DTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 T A Y A +T ++ + P +++ GH ++ TDPGP +DW R+ LV Sbjct: 172 RPKDLTKAMYASSARLTASICARHGIPVDREHIIGHVEVPGTDHTDPGPHWDWDRYMELV 231 Query: 179 SKETT 183 + T Sbjct: 232 RRAAT 236 >UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Myxococcales RepID=D0LQ75_HALO1 Length = 551 Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 38/178 (21%) Query: 15 PSPHYDCRPDDET--PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 PSP+Y+ RP P ++V+H G + W + T + V Sbjct: 238 PSPNYNSRPSGSIGDPAMVVIHTCE---GSYSSCW--SWLTNSASG-------------V 279 Query: 73 SAHCLIRRDG-EIVQYVPFDKRAWHAGVSQ----------YQGRERCNDFSIGIELEGTD 121 SAH ++ G +I Q V +RAWH G S ++ N F+IGIE G Sbjct: 280 SAHYVVNESGSQISQLVRESQRAWHIGASYQCSNNSSVDCWRNGYSSNHFTIGIEHGGFA 339 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIA-----KNMTGHCDIAPDRKTDPGPAFDWARF 174 + + + Q+ A R + D D ++ H + P +TDPGP + W + Sbjct: 340 SQSSFPSG--QIDASARLVCDITRDQGIPRDRYHIVSHGQLQPYNRTDPGPNWPWTTY 395 >UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGY2_THET1 Length = 638 Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 19/120 (15%) Query: 72 VSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTD 127 VSAH LIR DG + Q VP AW AG N SIGIE EG YT+ Sbjct: 296 VSAHYLIRSSDGLVTQLVPTKDVAWQAG------NWYVNIHSIGIEHEGFAVEGATWYTE 349 Query: 128 AQYQQLAAVTRALIDCY--PDIAKNMTGHCDI---APDRKT----DPGPAFDWARFRVLV 178 Y+ A + R L + P ++ GH D+ P + DPGP +DWA + L+ Sbjct: 350 QMYRSSARLVRYLAARFHIPLDRAHILGHDDVPGPGPAYQGRMHWDPGPYWDWAHYMALL 409 >UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793312 Length = 276 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 13/117 (11%) Query: 71 RVSAHCLIRRDGE------IVQYVPFDKRAWHAGVS---QYQGRERCNDFSIGIELEGTD 121 VS+H +I R E ++Q VP + ++HAG+S Y + + Sbjct: 66 NVSSHYVIARPTEAGTHNQLLQVVPENYVSYHAGISLWGNYSSINSISIGIEIVNYGYNA 125 Query: 122 TLAYTDAQYQ-QLAAV---TRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 T D YQ Q++ V +++ Y + N+ GH DIAP+RK DPG F W++ Sbjct: 126 TNDSWDPFYQDQISIVGLMVARMVNQYKVLPHNVVGHSDIAPNRKIDPGVMFPWSQL 182 >UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces RepID=Q9FC03_STRCO Length = 642 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 18/119 (15%) Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---YTDA 128 S H ++ G + Q VP A+HA G N SIGIE EG YT++ Sbjct: 295 ASTHYVMSSSGAVTQMVPTKDIAFHA------GNYSTNLHSIGIEHEGFAAHGAAWYTES 348 Query: 129 QYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKT-------DPGPAFDWARFRVLV 178 QYQ A + + L + + P +++ GH ++A DPG A+DW F L+ Sbjct: 349 QYQATADLVKYLAERFGVPLDRQHVIGHDNVAGPNSALVAGMHWDPGYAWDWNHFMSLL 407 >UniRef50_B1TGB7 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Burkholderia ambifaria RepID=B1TGB7_9BURK Length = 1030 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 75/192 (39%), Gaps = 46/192 (23%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 R SP++D +T +++H +P TI + F A + Sbjct: 232 RTAASPNFDEGRGSKTIDRIIIHIADVP---------------TIQHVVNTF--TNAASK 274 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE--------------- 116 VS+H L+ + GE+VQ+V AWH + N SIGIE Sbjct: 275 VSSHYLVGQAGEVVQFVSEADTAWHC--------KGSNQRSIGIEHIAVKRGGADYPRRN 326 Query: 117 --LEGTDTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGH--CDIAPDRKTDPGPAFD 170 ++ D LA T QY+ AA+ +L D Y P + GH D + P +D Sbjct: 327 GTVQHFDALAPTQLQYETSAALVASLCDKYQLPINRTTIMGHREADTSTGHTACPDGNWD 386 Query: 171 WARFRVLVSKET 182 W F LV+ T Sbjct: 387 WDYFMRLVNSRT 398 >UniRef50_A8FVJ2 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVJ2_SHESH Length = 259 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 16/120 (13%) Query: 71 RVSAHCLIRRDGE------IVQYVPFDKRAWHAGVSQYQG----RERCNDFSIGIELEGT 120 + SAH +I + E I V K A+H G Y ND S+G+EL T Sbjct: 96 KASAHWIIPDENEAEHGHFIWAMVAESKAAYHVGNVDYASILGEGLNVNDRSLGVELVNT 155 Query: 121 DTLAYTDAQYQQ-----LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 + Y Y Q LA + YP++ K++ H + P R++DPG F W F+ Sbjct: 156 QNVQYFRDPYSQWQIDMLARIVLYAWAKYPNL-KHVISHAKLDPARRSDPGENFPWEAFK 214 >UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY32_SYNWW Length = 222 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 12/114 (10%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQ------YQGRERCNDFSIGIELEGTDTLA 124 RVS H LI R G+I Q V + AW G+ Y G N +++ IE E + Sbjct: 51 RVSTHFLISRQGQIFQLVKEEDTAWANGIVNQPNWVLYDG-SNPNFYTLSIEHEALAGDS 109 Query: 125 YTDAQYQQLAAVTRALIDCYPDIA---KNMTGHCDI-APDRKTDPGPAFDWARF 174 ++ QYQ + R L+ + +IA +++ GH I + +R PG F W R Sbjct: 110 LSEEQYQASLCLHRLLVSRF-NIAVDEEHIIGHYRIDSINRSNCPGSRFPWKRL 162 >UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM08_DESAH Length = 439 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 3/97 (3%) Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQL 133 A+ +I R+G Q + R+ HAG+S + G+ + S+GIEL G T AQY+ + Sbjct: 100 ANYVIARNGVTYQIMDKQFRSDHAGLSMWNGQNDISSVSLGIELVGHHYAPLTSAQYRSV 159 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD 170 A + L Y K + H +A R P P F+ Sbjct: 160 AMLIDMLQKAYGLDDKAVLTHSQVAYGR---PNPWFN 193 >UniRef50_Q3AXW0 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Chroococcales RepID=Q3AXW0_SYNS9 Length = 308 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 21/125 (16%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG---------RERCNDFSIGIELEGTD 121 +VS H LI RDG ++ V RA+ AG S + G + N+F++ + LE Sbjct: 175 QVSYHTLISRDGRVLDLVDPLMRAYGAGYSAFLGEWAITNKRLKGSVNNFALHLSLETPS 234 Query: 122 TLA--------YTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDW 171 A Y+ QY LA V +D + P + H DI +R DP +FDW Sbjct: 235 NGANGRSGHSGYSSEQYDALALVLAGWMDAFNLPPTSVTTHRHVDIGGER-ADP-RSFDW 292 Query: 172 ARFRV 176 + +V Sbjct: 293 SALQV 297 >UniRef50_UPI0001B539A2 amidase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B539A2 Length = 638 Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 18/112 (16%) Query: 75 HCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA--YTDAQYQ 131 H +R DG++ Q+VP WHA G N+ S+GIE EG +T+A Y+ Sbjct: 306 HYTVRSSDGQVAQHVPTKDVGWHA------GNWYLNEKSLGIEHEGFAAQGTWFTEAMYR 359 Query: 132 QLAAVTRALIDCY--PDIAKNMTGHCDI-APDRKT------DPGPAFDWARF 174 Q A + R L + P ++ GH ++ P+ DPGP +DWA + Sbjct: 360 QSAKLVRYLAHRFGVPLDRAHILGHDNVPGPNADKIKSMHWDPGPYWDWAHY 411 >UniRef50_Q8DLW7 Tlr0359 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DLW7_THEEB Length = 287 Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 36/147 (24%) Query: 55 TIDPQAHPF-FAEIAHLR----VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE--- 106 T+D A F + HLR S H LI +G ++ VP+ KRA+ AG S + G+E Sbjct: 133 TVDSAASALNFFQTPHLRDEEQASYHELITLNGWLLHLVPWSKRAYGAGNSAF-GKEAAQ 191 Query: 107 -------RCNDFSIGIELE--------GTDTLAYTDAQYQQLA-AVTRALIDCYPDIAKN 150 N+F++ LE G YTDAQY+ LA V + ID + Sbjct: 192 TNPRLAPSVNNFALHFSLETPPQGRHNGPSHTGYTDAQYRTLAWLVAQTGID-----RQR 246 Query: 151 MTGHCDIAPDR---KTDPGPAFDWARF 174 +T H + DR + DP +FDW +F Sbjct: 247 VTTHAAV--DRSGERMDPR-SFDWVKF 270 >UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=2 Tax=Prochlorococcus marinus RepID=Q7V7M8_PROMM Length = 312 Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 21/124 (16%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG---------RERCNDFSIGIELEG-- 119 +VS H LI DG+I+ V RA+ AG S + G + N+F++ + LE Sbjct: 174 QVSYHTLITLDGQIIDVVDPLNRAYGAGNSAFLGEWVVTNPRFKGSVNNFALHLSLETPW 233 Query: 120 ------TDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTG--HCDIAPDRKTDPGPAFDW 171 + Y+D QY LA V +D + +N+T H D+A +R +DP +FDW Sbjct: 234 DGRNGYLNHSGYSDKQYDSLALVLADWMDRFNIPPENITTHQHVDLAGER-SDPR-SFDW 291 Query: 172 ARFR 175 + + Sbjct: 292 SNLQ 295 >UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH65_HALO1 Length = 233 Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 8/104 (7%) Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG----RERCNDFSIGIELEGTDTLAYTD 127 S H I +G I Q V AWH + G + N +GIELEG +T Sbjct: 118 ASWHITIDHEGTIWQMVAASACAWHCARGKVDGPSGKKLSINQAVVGIELEGHGE-EFTA 176 Query: 128 AQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAF 169 AQ + V RAL+ Y PD M H P R+ DPGP + Sbjct: 177 AQIEAACRVWRALVRTYAIPDHLA-MLEHSRYDPGRRVDPGPVW 219 >UniRef50_D2Q0D6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q0D6_9ACTO Length = 638 Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 18/116 (15%) Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---YTDAQYQ 131 + + DG+I Q+V AWHA G N SIGIE EG YT+A Y+ Sbjct: 299 YTMRSSDGQIWQHVKAKDVAWHA------GNWYMNMHSIGIEHEGYAAQGATWYTEALYR 352 Query: 132 QLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKT-------DPGPAFDWARFRVLV 178 A + R L + + P ++ GH +I T DPGP +DW R+ L+ Sbjct: 353 NSARLVRYLAEKHDIPLDRAHIIGHDEIPGTLPTTVAGMHWDPGPYWDWERYFELL 408 >UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=Clostridiales RepID=C9LCL1_RUMHA Length = 469 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 19/128 (14%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL----EGTDTLAYT 126 SAH + +GE+ Q V AWH G S Y+ E N SIGIE+ + T ++ T Sbjct: 47 NASAHYFVGFNGEVWQCVEDANIAWHCGASSYKHAECRNANSIGIEMCVRKKNTKSMGAT 106 Query: 127 -------DAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGP------AFDWAR 173 DA + A +TR L++ Y A ++ H D+ K P P A W Sbjct: 107 DKDWYFEDATVEAAAELTRYLMNKYGVPASHVIRHYDVTG--KICPNPYVYNTSAHTWDE 164 Query: 174 FRVLVSKE 181 F+ +S + Sbjct: 165 FKRKISGQ 172 >UniRef50_A8PNB6 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Rickettsiella grylli RepID=A8PNB6_9COXI Length = 406 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 8/54 (14%) Query: 72 VSAHCLI-----RRDGEIVQY---VPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117 +SAH L+ + D E Y V + RAWHAG S ++GRE ND SIGIE+ Sbjct: 41 LSAHFLVPKQPFKVDEESYDYYKLVDINDRAWHAGCSHFKGRESLNDNSIGIEI 94 >UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HCN0_STRPR Length = 895 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 19/119 (15%) Query: 73 SAHCLIR-RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTDA 128 SAH LIR DG + Q + AWHAG + N +IG+E EG + YT+ Sbjct: 304 SAHYLIRASDGLVTQMIENKHLAWHAGNWTH------NMHAIGVEHEGYAIKEGKWYTEP 357 Query: 129 QYQQLAAVTRALIDCY--PDIAKNMTGHCDIA-------PDRKTDPGPAFDWARFRVLV 178 QYQ A + + L Y P +++ GH ++A + D GP +DW + L+ Sbjct: 358 QYQSSADLVKFLATKYNVPLDREHIIGHDEVALQTDAGMANLHWDAGPYWDWNHYMGLM 416 >UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synechococcus sp. RCC307 RepID=A5GTP3_SYNR3 Length = 297 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 35/174 (20%) Query: 25 DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEI 84 D TP ++V+H G A+ T T HP A+ A S H L+ + GEI Sbjct: 134 DPTPAVIVLHETVYSLGS-------AINTFTT---PHPNDADQA----SYHTLVGQKGEI 179 Query: 85 VQYVPFDKRAWHAGVSQYQGR---------ERCNDFSIGIELE--------GTDTLAYTD 127 VQ V KRA+ AG S + GR N+F++ + LE YT Sbjct: 180 VQVVDPSKRAYGAGHSAFDGRWVFTSKHFSGSLNNFALHVSLETPPDGATSAQKHSGYTP 239 Query: 128 AQYQQLAAVTRALIDCYPDIAKNMTG--HCDIAPDRKTDPGPAFDWARFRVLVS 179 AQY L+ V + Y +T H D+ + ++DP +FDW + + ++ Sbjct: 240 AQYDALSRVLADWMVRYKIEPHAITTHRHVDLG-NARSDPR-SFDWQQLQTRLT 291 >UniRef50_A9AWP8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWP8_HERA2 Length = 250 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 28/153 (18%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR----VSA 74 +D RP P+ V+H T + F AE +L V A Sbjct: 20 WDYRPKGIKPSSAVIHT-------------------TNGNRGSSFEAEADYLEASSGVGA 60 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLA 134 H L+ + G+I + +P RAWHAG ++ + N SIGIE A+T Q LA Sbjct: 61 HYLVGQRGQIAEILPPIYRAWHAGAAK---DDWINSRSIGIECHHAVGEAWTHEQRAALA 117 Query: 135 AVTRALIDCYPDIAKNMTGHCDIA--PDRKTDP 165 + + L+ + + + H +A RK DP Sbjct: 118 WLCQRLMADWSIVLGAIETHRFVALPAGRKPDP 150 >UniRef50_B8HV25 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV25_CYAP4 Length = 274 Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 32/135 (23%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE-------------RCNDFSIGIEL 117 + S H LI R+G +V VP +KRA+ AG S + G N+FS I L Sbjct: 145 QASYHDLILRNGTVVHLVPLEKRAFGAGNSVFYGANGPETVQTNPKLPSSVNNFSYHISL 204 Query: 118 E----GTDTLA----YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDR---KTDPG 166 E G + A YT A+YQ LA LI + +T H + DR + DP Sbjct: 205 ESPADGNNENATHSGYTAAEYQSLA----WLIKAAGIPSNRITTHYAV--DRTGTRKDPR 258 Query: 167 PAFDWAR-FRVLVSK 180 +FD+ + F +LV+ Sbjct: 259 -SFDYTKLFELLVAN 272 >UniRef50_D2AYL5 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AYL5_STRRD Length = 666 Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 19/125 (15%) Query: 72 VSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTD 127 +S H +R DG I Q++ WHAG + Y N SIG+E EG YT+ Sbjct: 329 LSWHFTLRSGDGHIAQHLRGSDIGWHAG-NWY-----VNTRSIGLEHEGYLAKGGAWYTE 382 Query: 128 AQYQQLAAVTRALIDCY--PDIAKNMTGHCDI-------APDRKTDPGPAFDWARFRVLV 178 A Y+ AA+ L Y P ++ GH ++ D DPGP +DWA + L+ Sbjct: 383 AMYRSSAALVAHLARKYGVPLNRAHIIGHDNVPGTTPEGVRDMHQDPGPYWDWAHYFELL 442 Query: 179 SKETT 183 T Sbjct: 443 GSPLT 447 >UniRef50_P81717 N-acetylmuramoyl-L-alanine amidase A n=1 Tax=Achromobacter lyticus RepID=CWHA_ACHLY Length = 177 Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 32/132 (24%) Query: 71 RVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTD 127 +VSAH LIR+ DG+I Q V +AWHA + N ++IGIE +G D ++ Sbjct: 49 QVSAHYLIRKSDGQITQMVREYHQAWHA--------KNHNYYTIGIEHDGRAADAGNWSA 100 Query: 128 AQYQQLAAVTRAL-----IDC--------------YPDIAKNMTGHCDIAPD-RKTDPGP 167 A A +T+++ ++C PD + + GH ++ + + DPG Sbjct: 101 AMVNASARLTKSICARRGVNCASAWKGPGYDTFHLVPDSVR-VKGHGMLSGNENRYDPGK 159 Query: 168 AFDWARFRVLVS 179 F W+ + L++ Sbjct: 160 YFPWSNYYNLIN 171 >UniRef50_A0YR44 AmpD n=3 Tax=Oscillatoriales RepID=A0YR44_9CYAN Length = 301 Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 17/81 (20%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE---------RCNDFSIGIELE--- 118 + S H LI +G++V VP D RA+ AG S +QG N+F+ + LE Sbjct: 161 QASYHTLITLNGDVVYIVPPDLRAYGAGNSVFQGEAVQTDAKFPPSVNNFAYHVSLETPP 220 Query: 119 -----GTDTLAYTDAQYQQLA 134 G YT AQYQ LA Sbjct: 221 DGLRNGASHSGYTTAQYQSLA 241 >UniRef50_C1A451 Putative amidase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A451_GEMAT Length = 164 Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 53/122 (43%), Gaps = 13/122 (10%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVS------QYQGRERCNDFSIGIELEGTDTLA 124 +VS H +I DGE+ VP+D+ +W G S ++ + N + I L G Sbjct: 42 QVSYHAIIAPDGEVALCVPWDRASWSVGASRQPDDLRFTFGSKGNGATENIALAGGPPTK 101 Query: 125 YTDAQYQQLAAVTRALIDCYP---DIAKNMTGHCDIA--PDRKTDP--GPAFDWARFRVL 177 T AQ Q L + RA + + + GH D+A RKTDP G D R Sbjct: 102 PTPAQVQVLVRLLRARMIAHQWPLTETWRIVGHVDLAMPRGRKTDPTGGAWLDLGAVRQA 161 Query: 178 VS 179 VS Sbjct: 162 VS 163 >UniRef50_D2AX66 Negative regulator of beta-lactamase expression-like protein n=12 Tax=Actinomycetales RepID=D2AX66_STRRD Length = 646 Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 18/118 (15%) Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTDAQYQ 131 + L DG I Q++ W AG N SIG+E EG YT+A Y+ Sbjct: 314 YSLRSSDGHIAQHLKTKDVGWQAG------NWYVNAKSIGLEHEGFLGEGAAWYTEAMYR 367 Query: 132 QLAAVTR--ALIDCYPDIAKNMTGHCDIAPDRKT-------DPGPAFDWARFRVLVSK 180 A + R A+ P ++ GH ++ T DPGP +DWAR+ L+ K Sbjct: 368 TSAKLVRYLAMRHGVPLDRAHIIGHDNVPGTLPTTVRGMHEDPGPFWDWARYFELLGK 425 >UniRef50_Q160K6 N-acetyl-anhydromuramyl-L-alanine amidase, putative n=2 Tax=Roseobacter RepID=Q160K6_ROSDO Length = 352 Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 56/147 (38%), Gaps = 50/147 (34%) Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG------RERCNDFSIGIEL-------- 117 +S + L+ DG + Q F++RA HAG S ++ + N +I I L Sbjct: 89 LSYNVLVDLDGSLHQARAFNRRAGHAGRSNFKATSGLKNQSSLNGSTIAISLVNLGFHEH 148 Query: 118 ------------------EGTDTLA-----------------YTDAQYQQLAAVTRALID 142 + D A YTDAQ A+ AL+ Sbjct: 149 FSGGHWWYARSKGKLRGPKVVDVEANKMSSIYNPGLVMHWVPYTDAQVASCEALIEALVA 208 Query: 143 CYPDIAKNMTGHCDIAPDRKTDPGPAF 169 YP I + + GH D++ + K DPGPA Sbjct: 209 KYPSITE-IVGHDDVSINAKLDPGPAL 234 >UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC n=3 Tax=Lactobacillus RepID=C0WQZ5_LACBU Length = 604 Score = 40.8 bits (94), Expect = 0.020, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 18/134 (13%) Query: 53 TGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFS 112 T T +A FA + + + G + + V AWHA G N S Sbjct: 253 TETTFDEATNLFASTPSYTSANYVISSEQGTVAEMVRPQNVAWHA------GNWYINSHS 306 Query: 113 IGIELEGTDTLA---YTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDI----APDRKT 163 IGIE EG + YT+A YQ AA+ + L Y P +++ GH ++ +KT Sbjct: 307 IGIEHEGYAAVGGYWYTEAMYQSSAALVKYLAAKYNIPLDRQHIIGHDNVPGLTPAAQKT 366 Query: 164 ---DPGPAFDWARF 174 DPG ++W + Sbjct: 367 MHWDPGTYWNWQHY 380 >UniRef50_C0G0C8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Natrialba magadii ATCC 43099 RepID=C0G0C8_NATMA Length = 321 Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 38/140 (27%) Query: 72 VSAHCLIRR--------DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 VS+H L++ G + Q V D+ AWHA R N SIGIE E D Sbjct: 107 VSSHYLVKNYDWTDGPEAGHVDQLVHHDRAAWHA-------RSIANHRSIGIEHEWFDDN 159 Query: 124 AYTDAQYQQLAAVTRALID-------------CYPDIAKNMTGHCDIAPD---------R 161 +DA Y+ A + R + D C + + + GH + PD Sbjct: 160 GISDACYESSAELVRCIADMHDIPLEFYTSNTCIQNESGGIIGHTHV-PDGDCSSFHHGG 218 Query: 162 KTDPGPAFDWARFRVLVSKE 181 +T P P +D F LV +E Sbjct: 219 RTCPYPDWDMDHFESLVKEE 238 >UniRef50_A5IAD5 N-acetylmuramoyl-L-alanine amidase; amidase 2 n=7 Tax=Bacteria RepID=A5IAD5_LEGPC Length = 232 Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 26/117 (22%) Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE-LEGTDTL-AYTD 127 L VS+H L+ RDG I Q +P A H N ++IGIE + G D+ TD Sbjct: 114 LNVSSHFLVDRDGTIYQLMPETWMARHVI--------GLNHYAIGIENIGGVDSKDDLTD 165 Query: 128 AQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDR---------------KTDPGPAF 169 Q + A + L + YP I K + GH + + KTDPGP F Sbjct: 166 EQVKANAFLVCYLKNKYPQI-KYLIGHNEYLQYKGTALWLEKDPNYQTDKTDPGPTF 221 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 310 2e-83 UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 297 1e-79 UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 294 1e-78 UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regul... 265 6e-70 UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 263 2e-69 UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycet... 263 3e-69 UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=... 259 3e-68 UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C... 257 9e-68 UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 257 1e-67 UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 256 2e-67 UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regu... 254 1e-66 UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma p... 251 8e-66 UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 249 4e-65 UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regu... 248 9e-65 UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 T... 245 5e-64 UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 ... 245 5e-64 UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regu... 245 5e-64 UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK... 244 9e-64 UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regu... 242 4e-63 UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regu... 242 5e-63 UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_... 239 3e-62 UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=... 239 4e-62 UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regu... 238 5e-62 UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4... 237 1e-61 UniRef50_A6T2C3 Negative regulator of beta-lactamase expression ... 237 2e-61 UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regu... 228 7e-59 UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkh... 227 2e-58 UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 225 7e-58 UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amid... 220 1e-56 UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regu... 217 1e-55 UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A... 210 2e-53 UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regu... 196 2e-49 UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regu... 195 5e-49 UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodos... 194 1e-48 UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodo... 194 1e-48 UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regu... 193 3e-48 UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodoba... 192 6e-48 UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regu... 191 6e-48 UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphapr... 188 9e-47 UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 186 3e-46 UniRef50_A8TR24 Negative regulator of beta-lactamase expression ... 186 3e-46 UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regu... 185 4e-46 UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6... 185 7e-46 UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 184 1e-45 UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regu... 182 5e-45 UniRef50_Q093H8 Negative regulator of beta-lactamase expression ... 181 1e-44 UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 180 2e-44 UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 179 4e-44 UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regu... 178 1e-43 UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 176 2e-43 UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algor... 176 4e-43 UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 173 2e-42 UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 ... 172 5e-42 UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 171 8e-42 UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 ... 171 1e-41 UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xant... 169 4e-41 UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR... 168 6e-41 UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax... 168 1e-40 UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 ... 167 1e-40 UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protei... 166 3e-40 UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvu... 164 1e-39 UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 ... 163 3e-39 UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Ta... 163 4e-39 UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 163 4e-39 UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacte... 163 4e-39 UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regu... 162 4e-39 UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protei... 162 5e-39 UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candida... 161 7e-39 UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regu... 161 8e-39 UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brach... 161 1e-38 UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacte... 158 1e-37 UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5... 157 1e-37 UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protei... 157 1e-37 UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 157 2e-37 UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regu... 157 2e-37 UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 156 3e-37 UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-... 155 7e-37 UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphin... 154 1e-36 UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-... 154 1e-36 UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protei... 154 2e-36 UniRef50_C1QGN2 Negative regulator of beta-lactamase expression ... 153 2e-36 UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aerom... 153 2e-36 UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protei... 153 2e-36 UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negati... 152 5e-36 UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 151 7e-36 UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 151 1e-35 UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_... 151 1e-35 UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 148 1e-34 UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regu... 147 1e-34 UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regu... 147 2e-34 UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regu... 146 2e-34 UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orien... 146 3e-34 UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regu... 145 6e-34 UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regu... 145 8e-34 UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regu... 144 9e-34 UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regu... 144 9e-34 UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax... 143 4e-33 UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2... 142 6e-33 UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regu... 142 7e-33 UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regu... 140 2e-32 UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regu... 139 3e-32 UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoar... 138 8e-32 UniRef50_C4DNA4 Negative regulator of beta-lactamase expression ... 138 9e-32 UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO 138 9e-32 UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regu... 138 1e-31 UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 137 2e-31 UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 ... 136 3e-31 UniRef50_C4SAC3 Negative regulator of beta-lactamase expression ... 135 7e-31 UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=... 134 9e-31 UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 ... 134 1e-30 UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regu... 134 1e-30 UniRef50_B1TGB7 N-acetylmuramyl-L-alanine amidase, negative regu... 134 1e-30 UniRef50_D2Q0D6 N-acetylmuramyl-L-alanine amidase, negative regu... 132 5e-30 UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regu... 132 6e-30 UniRef50_A9AXU4 N-acetylmuramyl-L-alanine amidase, negative regu... 132 7e-30 UniRef50_UPI0001B539A2 amidase n=1 Tax=Streptomyces sp. AA4 RepI... 129 4e-29 UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1... 129 4e-29 UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regu... 128 8e-29 UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces R... 126 3e-28 UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=... 123 2e-27 UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-... 123 2e-27 UniRef50_A6GHP2 Putative amidase n=1 Tax=Plesiocystis pacifica S... 123 3e-27 UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9... 121 8e-27 UniRef50_A4WS28 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 117 2e-25 UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=A... 116 3e-25 UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=... 111 1e-23 UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD... 109 5e-23 UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 108 1e-22 UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regu... 107 1e-22 UniRef50_A8FVJ2 Negative regulator of beta-lactamase expression-... 105 6e-22 UniRef50_Q5Z3U1 Putative uncharacterized protein n=1 Tax=Nocardi... 105 8e-22 UniRef50_Q3AXW0 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 105 9e-22 UniRef50_C0A8M7 Negative regulator of beta-lactamase expression-... 105 1e-21 UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 104 1e-21 UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regu... 101 1e-20 UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regu... 100 2e-20 UniRef50_Q8DLW7 Tlr0359 protein n=1 Tax=Thermosynechococcus elon... 90 5e-17 UniRef50_A8PNB6 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 77 3e-13 UniRef50_Q65A81 N-acetyl-anhydromuramyl-L-alanine amidase n=1 Ta... 70 3e-11 UniRef50_A4NW45 N-acetyl-anhydromuranmyl-L-alanine amidase n=1 T... 69 8e-11 UniRef50_A8LCD7 N-acetylmuramyl-L-alanine amidase, negative regu... 68 2e-10 Sequences not found previously or not previously below threshold: UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regu... 128 1e-28 UniRef50_C4DKK4 Negative regulator of beta-lactamase expression ... 119 4e-26 UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HC... 119 6e-26 UniRef50_A3TR75 Putative amidase n=1 Tax=Janibacter sp. HTCC2649... 118 7e-26 UniRef50_D2AX66 Negative regulator of beta-lactamase expression-... 114 2e-24 UniRef50_D2AYL5 Negative regulator of beta-lactamase expression-... 113 3e-24 UniRef50_D1SBP4 N-acetylmuramyl-L-alanine amidase, negative regu... 107 1e-22 UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synec... 107 2e-22 UniRef50_C7Q860 N-acetylmuramyl-L-alanine amidase, negative regu... 105 7e-22 UniRef50_A9B3J4 N-acetylmuramyl-L-alanine amidase, negative regu... 101 1e-20 UniRef50_Q2SEW1 Negative regulator of beta-lactamase expression ... 98 9e-20 UniRef50_B9XDJ7 N-acetylmuramoyl-L-alanine amidase family 2 n=1 ... 98 1e-19 UniRef50_B2A1Q6 N-acetylmuramoyl-L-alanine amidase family 2 n=1 ... 98 2e-19 UniRef50_A5IAD5 N-acetylmuramoyl-L-alanine amidase; amidase 2 n=... 95 1e-18 UniRef50_Q7NG55 Glr3318 protein n=1 Tax=Gloeobacter violaceus Re... 95 2e-18 UniRef50_UPI0001B554B9 secreted amidase n=1 Tax=Streptomyces sp.... 94 2e-18 UniRef50_B8HV25 N-acetylmuramyl-L-alanine amidase, negative regu... 94 2e-18 UniRef50_P81717 N-acetylmuramoyl-L-alanine amidase A n=1 Tax=Ach... 94 3e-18 UniRef50_B6BGC2 B-N-acetylglucosaminidase, glycoside hydrolase f... 93 3e-18 UniRef50_Q05S34 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 91 1e-17 UniRef50_A0M513 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Grame... 91 1e-17 UniRef50_B9XDJ6 N-acetylmuramyl-L-alanine amidase, negative regu... 90 3e-17 UniRef50_UPI00016C05EA N-acetylmuramoyl-L-alanine amidase n=1 Ta... 90 3e-17 UniRef50_B9XPB1 N-acetylmuramyl-L-alanine amidase, negative regu... 89 8e-17 UniRef50_C0CQ24 Putative uncharacterized protein n=4 Tax=Clostri... 88 2e-16 UniRef50_C0G0C8 N-acetylmuramyl-L-alanine amidase, negative regu... 88 2e-16 UniRef50_C0WEF9 Putative uncharacterized protein n=1 Tax=Acidami... 87 2e-16 UniRef50_A0YR44 AmpD n=3 Tax=Oscillatoriales RepID=A0YR44_9CYAN 87 3e-16 UniRef50_A3HZ10 Putative uncharacterized protein n=1 Tax=Algorip... 86 4e-16 UniRef50_A0Q0S8 N-acetylmuramoyl-L-alanine amidase cwlL (Cellwal... 86 4e-16 UniRef50_A9AWP8 N-acetylmuramyl-L-alanine amidase, negative regu... 86 4e-16 UniRef50_Q5WIB6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacil... 86 5e-16 UniRef50_C5PKQ4 Putative uncharacterized protein n=2 Tax=Sphingo... 85 1e-15 UniRef50_B9XKL0 N-acetylmuramyl-L-alanine amidase, negative regu... 85 1e-15 UniRef50_C7UBT6 Sporulation domain-containing protein n=3 Tax=Ba... 84 2e-15 UniRef50_Q30PL8 Negative regulator of AmpC, AmpD n=4 Tax=Bacteri... 84 2e-15 UniRef50_Q160K6 N-acetyl-anhydromuramyl-L-alanine amidase, putat... 84 2e-15 UniRef50_A7NJ74 N-acetylmuramyl-L-alanine amidase, negative regu... 84 3e-15 UniRef50_Q92IC3 Putative N-acetylmuramoyl-L-alanine amidase RC04... 84 3e-15 UniRef50_D2QH68 N-acetylmuramyl-L-alanine amidase, negative regu... 83 5e-15 UniRef50_C4ZEY9 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Clost... 83 5e-15 UniRef50_UPI0001BC309D N-acetylmuramoyl-L-alanine amidase n=1 Ta... 82 7e-15 UniRef50_B8HSE7 N-acetylmuramyl-L-alanine amidase, negative regu... 82 9e-15 UniRef50_UPI0001C1705F AmpD n=2 Tax=Nostocaceae RepID=UPI0001C1705F 82 1e-14 UniRef50_A4TAY9 Peptidoglycan-binding domain 1 protein n=5 Tax=r... 82 1e-14 UniRef50_B4WRE3 N-acetylmuramoyl-L-alanine amidase domain protei... 81 2e-14 UniRef50_Q9ZX49 Gp29 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZX4... 81 3e-14 UniRef50_B0C6S0 N-acetyl-anhydromuramyl-L-alanine amidase, putat... 80 3e-14 UniRef50_B2SIS3 N-acetylmuramoyl-L-alanine amidase, putative n=2... 80 3e-14 UniRef50_A5Z412 Putative uncharacterized protein n=1 Tax=Eubacte... 80 4e-14 UniRef50_Q609E7 N-acetylmuramoyl-L-alanine amidase domain/peptid... 80 4e-14 UniRef50_D2RJL3 N-acetylmuramyl-L-alanine amidase, negative regu... 79 5e-14 UniRef50_UPI0001BCD943 Peptidoglycan-binding domain 1 protein n=... 79 6e-14 UniRef50_A9B2D0 Putative uncharacterized protein n=1 Tax=Herpeto... 79 7e-14 UniRef50_C1MT36 Predicted protein n=1 Tax=Micromonas pusilla CCM... 79 7e-14 UniRef50_B5CSL4 Putative uncharacterized protein n=4 Tax=Clostri... 78 1e-13 UniRef50_C4V1H2 Putative uncharacterized protein n=1 Tax=Selenom... 78 1e-13 UniRef50_Q04T28 Amidase n=4 Tax=Leptospira RepID=Q04T28_LEPBJ 78 1e-13 UniRef50_B8HPP1 N-acetylmuramyl-L-alanine amidase, negative regu... 78 1e-13 UniRef50_B5LGB7 Amidase n=10 Tax=unclassified Siphoviridae RepID... 78 2e-13 UniRef50_C0Z5F5 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 78 2e-13 UniRef50_B0G3S2 Putative uncharacterized protein n=5 Tax=Clostri... 77 3e-13 UniRef50_B5LLI8 Gp242 n=8 Tax=unclassified Myoviridae RepID=B5LL... 77 3e-13 UniRef50_C5RQQ9 N-acetylmuramoyl-L-alanine amidase family 2 n=3 ... 77 4e-13 UniRef50_UPI00019739B2 N-acetylmuramoyl-L-alanine amidase n=1 Ta... 76 4e-13 UniRef50_C7MM46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Crypt... 76 5e-13 UniRef50_B1ABI9 Putative uncharacterized protein n=1 Tax=Lactoco... 76 5e-13 UniRef50_B2J1Q9 N-acetylmuramoyl-L-alanine amidase, family 2 n=4... 76 5e-13 UniRef50_C2BV37 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Mobil... 76 6e-13 UniRef50_A1UKT0 Peptidoglycan-binding domain 1 protein n=3 Tax=M... 76 7e-13 UniRef50_B0MAX7 Putative uncharacterized protein n=1 Tax=Anaeros... 75 8e-13 UniRef50_C7N6M2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Slack... 75 8e-13 UniRef50_C8RU72 Prophage LambdaSa2, lysin n=1 Tax=Corynebacteriu... 75 1e-12 UniRef50_B4AHH5 N-acetylmuramoyl-L-alanine amidase XlyB (Cellwal... 75 1e-12 UniRef50_C8VXP6 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Pepto... 75 1e-12 UniRef50_A5GSJ2 Putative uncharacterized protein SynRCC307_0948 ... 75 1e-12 UniRef50_B1V3W0 N-acetylmuramoyl-L-alanine amidase, family 2 n=8... 75 1e-12 UniRef50_C6JDZ2 Putative uncharacterized protein n=1 Tax=Ruminoc... 74 2e-12 UniRef50_A8RYS3 Putative uncharacterized protein n=3 Tax=Clostri... 74 2e-12 UniRef50_Q026T4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 74 2e-12 UniRef50_Q925X1 Lin2374 protein n=2 Tax=Listeria RepID=Q925X1_LISIN 74 2e-12 UniRef50_UPI0001693C62 N-acetylmuramoyl-L-alanine amidase, famil... 73 3e-12 UniRef50_C7N142 Negative regulator of beta-lactamase expression ... 73 3e-12 UniRef50_B0CCH2 N-acetylmuramoyl-L-alanine amidase, putative n=1... 73 3e-12 UniRef50_C0W4G6 Possible N-acetylmuramoyl-L-alanine amidase n=1 ... 73 4e-12 UniRef50_P54450 N-acetylmuramoyl-L-alanine amidase cwlH n=1 Tax=... 73 4e-12 UniRef50_B9XEI5 N-acetylmuramyl-L-alanine amidase, negative regu... 73 4e-12 UniRef50_C3EV93 N-acetylmuramoyl-L-alanine amidase n=11 Tax=Baci... 73 5e-12 UniRef50_C0F005 Putative uncharacterized protein n=1 Tax=Eubacte... 73 5e-12 UniRef50_A6NPI6 Putative uncharacterized protein n=1 Tax=Bactero... 73 6e-12 UniRef50_C1A451 Putative amidase n=1 Tax=Gemmatimonas aurantiaca... 73 6e-12 UniRef50_A7NLK9 N-acetylmuramyl-L-alanine amidase, negative regu... 72 7e-12 UniRef50_Q31MV4 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 72 8e-12 UniRef50_P39800 N-acetylmuramoyl-L-alanine amidase xlyA n=4 Tax=... 72 1e-11 UniRef50_UPI0001979E35 N-acetylmuramyl-L-alanine amidase, negati... 71 1e-11 UniRef50_C3GU84 N-acetylmuramoyl-L-alanine amidase / S-layer pro... 71 2e-11 UniRef50_A7VR21 Putative uncharacterized protein n=1 Tax=Clostri... 71 2e-11 UniRef50_A3DJ52 N-acetylmuramyl-L-alanine amidase, negative regu... 71 2e-11 UniRef50_C4KDJ8 Peptidoglycan-binding domain 1 protein n=1 Tax=T... 70 3e-11 UniRef50_B7HAI4 N-acetylmuramoyl-L-alanine amidase n=19 Tax=Baci... 70 3e-11 UniRef50_A8E261 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 70 3e-11 UniRef50_B0TCI8 N-acetylmuramoyl-l-alanine amidase, putative n=1... 70 4e-11 UniRef50_A7GU51 N-acetylmuramoyl-L-alanine amidase family 2 n=99... 69 5e-11 UniRef50_P36550 N-acetylmuramoyl-L-alanine amidase cwlL n=4 Tax=... 69 5e-11 UniRef50_B1ZXM8 N-acetylmuramyl-L-alanine amidase, negative regu... 69 7e-11 UniRef50_Q8KD30 N-acetylmuramoyl-L-alanine amidase, putative n=1... 69 9e-11 UniRef50_D0LV42 N-acetylmuramyl-L-alanine amidase, negative regu... 68 1e-10 UniRef50_B0ACG4 Putative uncharacterized protein n=1 Tax=Clostri... 68 2e-10 UniRef50_B6XUG6 Putative uncharacterized protein n=2 Tax=Bifidob... 68 2e-10 >UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=65 Tax=Gammaproteobacteria RepID=AMPD_ECOLI Length = 183 Score = 310 bits (794), Expect = 2e-83, Method: Composition-based stats. Identities = 183/183 (100%), Positives = 183/183 (100%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA Sbjct: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT Sbjct: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK Sbjct: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 Query: 181 ETT 183 ETT Sbjct: 181 ETT 183 >UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=36 Tax=Proteobacteria RepID=A4W6L1_ENT38 Length = 187 Score = 297 bits (760), Expect = 1e-79, Method: Composition-based stats. Identities = 149/182 (81%), Positives = 162/182 (89%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 M L+ GWLV AR VPSPH+DCRP+DE+P+LLVVHNISLPPGEFGGPWIDALFTGTIDP A Sbjct: 1 MQLQNGWLVDARHVPSPHHDCRPEDESPSLLVVHNISLPPGEFGGPWIDALFTGTIDPNA 60 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVS Y GRE+CNDFSIGIELEGT Sbjct: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSSYCGREKCNDFSIGIELEGT 120 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 DT YTDAQYQ L AVTR LI CYP I+ N+TGH DIAP RKTDPGPAFDW+RFR +++ Sbjct: 121 DTTPYTDAQYQALCAVTRKLIACYPTISDNITGHSDIAPVRKTDPGPAFDWSRFRAMLTA 180 Query: 181 ET 182 + Sbjct: 181 SS 182 >UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=192 Tax=Proteobacteria RepID=AMPD_CITFR Length = 187 Score = 294 bits (752), Expect = 1e-78, Method: Composition-based stats. Identities = 159/182 (87%), Positives = 168/182 (92%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 MLL++GWL ARRVPSPHYDCRPDDE P+LLVVHNISLPPGEFGGPWIDALFTGTIDP A Sbjct: 1 MLLDEGWLAEARRVPSPHYDCRPDDENPSLLVVHNISLPPGEFGGPWIDALFTGTIDPNA 60 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HP+FA IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVS YQGRERCNDFSIGIELEGT Sbjct: 61 HPYFAGIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSSYQGRERCNDFSIGIELEGT 120 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 DTLAYTDAQYQQLAAVT ALI YP IA NMTGHC+IAP+RKTDPGP+FDWARFR LV+ Sbjct: 121 DTLAYTDAQYQQLAAVTNALITRYPAIANNMTGHCNIAPERKTDPGPSFDWARFRALVTP 180 Query: 181 ET 182 + Sbjct: 181 SS 182 >UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regulates ampC) n=25 Tax=Proteobacteria RepID=B0VMP8_ACIBS Length = 189 Score = 265 bits (677), Expect = 6e-70, Method: Composition-based stats. Identities = 90/179 (50%), Positives = 120/179 (67%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 G L GAR+VPSP+++ RP ++VVHNISLPP +FGG +I+ F +D HP+F Sbjct: 11 DGQLKGARQVPSPNFNQRPAGTEIQMIVVHNISLPPSQFGGGYIEQFFQNKLDWSVHPYF 70 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 I ++VS H LI R GE++Q+V F+ RAWHAG S Y + CND+SIGIELEG+D L Sbjct: 71 QTIEGMQVSTHLLILRTGEVLQFVNFNDRAWHAGRSSYLAKIECNDYSIGIELEGSDDLP 130 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 + D QY+ L V A+ YP+I ++ GH DIAP RKTDPGP F W FR L++++ T Sbjct: 131 FEDLQYEVLTDVVTAIRQAYPEIKNHIAGHSDIAPGRKTDPGPYFKWQHFRQLLAQKKT 189 >UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=14 Tax=Gammaproteobacteria RepID=Q4ZY97_PSEU2 Length = 182 Score = 263 bits (673), Expect = 2e-69, Method: Composition-based stats. Identities = 95/175 (54%), Positives = 118/175 (67%), Gaps = 2/175 (1%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GW G + PSP+++ RP+ E +LLV+HNISLPP +F + A F +D HP+F Sbjct: 7 SGWCDGVQHCPSPNFNARPEGE-ISLLVIHNISLPPAQFKTGKVQAFFQNQLDIDEHPYF 65 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 IA LRVSAH LI RDGE++Q+V RAWHAGVS +QGRE CNDFS+GIELEGTD Sbjct: 66 VGIADLRVSAHFLIERDGEVIQFVSCLDRAWHAGVSSFQGREGCNDFSVGIELEGTDDQP 125 Query: 125 YTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 +TDAQY L +TR L + + + GH D+AP RKTDPGP FDWARFR + Sbjct: 126 FTDAQYDALIDLTRQLRQAFEAITPERICGHSDVAPGRKTDPGPCFDWARFRAAL 180 >UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R6I7_AGGAD Length = 217 Score = 263 bits (672), Expect = 3e-69, Method: Composition-based stats. Identities = 97/174 (55%), Positives = 126/174 (72%), Gaps = 1/174 (0%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 ++ GWL+ RRV SPH+D RPD + +LL++H ISLPP +FGG +ID F G +D QAH Sbjct: 40 QIKDGWLLDERRVLSPHFDQRPDPQDISLLIIHYISLPPEQFGGGYIDDFFQGKLDAQAH 99 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 P+F EI+ LRVSAHCLI R G I QYV F+ RAWHAG+S ++GRE+CNDF+IGIELEG++ Sbjct: 100 PYFQEISLLRVSAHCLIERTGRITQYVNFNDRAWHAGLSYFEGREKCNDFAIGIELEGSN 159 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAK-NMTGHCDIAPDRKTDPGPAFDWARF 174 +T QY L +TR ++ YP I K + GHCD++P RK DPG FDW R+ Sbjct: 160 EQPFTTQQYDTLQRLTRQIMQAYPRITKERIVGHCDVSPGRKIDPGQYFDWQRY 213 >UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=Q65VN8_MANSM Length = 190 Score = 259 bits (663), Expect = 3e-68, Method: Composition-based stats. Identities = 90/182 (49%), Positives = 128/182 (70%), Gaps = 1/182 (0%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 + ++ GWL G R++ SPH+D RP +LLV+H ISLPP +FGG +I+ F G ++P+ Sbjct: 8 IKIKNGWLSGVRKIISPHFDSRPSQADISLLVIHYISLPPEQFGGGYIEDFFQGKLNPET 67 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HP+F I +RVSAHCLI RDG + Q+V F+ RAWHAG S +QGRE+CND++IGIELEG+ Sbjct: 68 HPYFQTIYQIRVSAHCLIGRDGRVTQFVSFNDRAWHAGESCFQGREKCNDYAIGIELEGS 127 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAK-NMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 + +T+ QYQ+LA +T + YP I + + GHCD+AP RK DPG F+W ++ L+ Sbjct: 128 NEQPFTEVQYQRLAELTNIIRHYYPKITEDRIVGHCDVAPGRKIDPGQYFEWTKYFDLLK 187 Query: 180 KE 181 + Sbjct: 188 ES 189 >UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C6APP4_AGGAN Length = 184 Score = 257 bits (658), Expect = 9e-68, Method: Composition-based stats. Identities = 94/175 (53%), Positives = 127/175 (72%), Gaps = 1/175 (0%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 + +++GWL R+V SPH+D RP+ + +LL++H ISLPP +FGG +ID F G + P Sbjct: 6 LKIDKGWLTNTRKVVSPHFDARPNPQDISLLIIHYISLPPEQFGGSYIDDFFQGKLAPNR 65 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HP+FAEI+ LRVSAHCLI R GEI QYV F+ RAWHAG+S ++GRE+CNDF+IGIELEG+ Sbjct: 66 HPYFAEISTLRVSAHCLINRAGEITQYVNFNDRAWHAGISCFEGREKCNDFAIGIELEGS 125 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAK-NMTGHCDIAPDRKTDPGPAFDWARF 174 + +T QY L +T+ ++ YP I K + GHCD++P RK DPG FDWA + Sbjct: 126 NEQPFTTQQYVSLQRLTQEIMRAYPLITKERIVGHCDVSPGRKIDPGQYFDWATY 180 >UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Proteobacteria RepID=Q46X31_RALEJ Length = 203 Score = 257 bits (657), Expect = 1e-67, Method: Composition-based stats. Identities = 100/173 (57%), Positives = 122/173 (70%), Gaps = 2/173 (1%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 +GW+ ARRVPSP++D RP L+V+HNISLPPG+FG I+A F +DP HPFF Sbjct: 18 EGWVPAARRVPSPNFDERPAGMPVDLVVLHNISLPPGQFGSGDIEAFFQNRLDPDRHPFF 77 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 A I ++VSAH L+RRDGE+VQ+VP KRAWHAG S + GR RCNDFS+GIE+EGTD L Sbjct: 78 ATIHQVQVSAHFLVRRDGELVQFVPCTKRAWHAGQSDFFGRSRCNDFSVGIEIEGTDDLP 137 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 +T AQY + + +AL P A + GH DIAP RKTDPGP FDW RF L Sbjct: 138 FTAAQYTTTSTLVKALRATLPVRA--VAGHSDIAPGRKTDPGPHFDWDRFAGL 188 >UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Psychrobacter RepID=A5WCS6_PSYWF Length = 206 Score = 256 bits (655), Expect = 2e-67, Method: Composition-based stats. Identities = 93/185 (50%), Positives = 119/185 (64%), Gaps = 6/185 (3%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGP------WIDALFTG 54 + +E G L A +PSP+Y+ RP+ + +V+HNISLPP EFG ++ ALFT Sbjct: 17 LSIESGLLTQADWLPSPNYNQRPESCEISAIVIHNISLPPNEFGQTNKQGLHYVKALFTN 76 Query: 55 TIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIG 114 T+D AHP+F I + VSAH I R G+I Q V F+ RAWHAG S Y GR CND+SIG Sbjct: 77 TLDWDAHPYFKSIEGMEVSAHLFIERSGQITQLVNFENRAWHAGRSSYLGRPECNDYSIG 136 Query: 115 IELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 IELEG+D A+T QY L++V A+ YP +++TGH DIAP RKTDPG F+W Sbjct: 137 IELEGSDFQAFTAEQYTALSSVIAAIYKAYPKTRRHLTGHSDIAPGRKTDPGEYFEWDTL 196 Query: 175 RVLVS 179 R LVS Sbjct: 197 RDLVS 201 >UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=55 Tax=Proteobacteria RepID=C7RNH8_9PROT Length = 195 Score = 254 bits (649), Expect = 1e-66, Method: Composition-based stats. Identities = 93/169 (55%), Positives = 116/169 (68%), Gaps = 2/169 (1%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 GWL A + SP+ D RP E +++V+H ISLPP FGG I LFT +DP AHP+FA Sbjct: 15 GWLDEALHIVSPNRDPRPPGEVVSMIVIHAISLPPARFGGDGIARLFTNRLDPAAHPYFA 74 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 +I LRVSAH L+RRDGE++Q+V +RAWHAG+S ++GR+ CNDFS+GIELEG D + Sbjct: 75 QIIGLRVSAHFLVRRDGELIQFVSCRERAWHAGLSAWKGRQGCNDFSLGIELEGCDESPF 134 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 DAQY L A+ L YP A + GH DI+P RKTDPGP FDW R Sbjct: 135 EDAQYSCLLALVGRLCAGYPIDA--VVGHSDISPGRKTDPGPCFDWRRL 181 >UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVS6_9GAMM Length = 206 Score = 251 bits (642), Expect = 8e-66, Method: Composition-based stats. Identities = 101/188 (53%), Positives = 129/188 (68%), Gaps = 10/188 (5%) Query: 3 LEQGWL--VGARRVPSPHYDCRP-------DDETPTLLVVHNISLPPGEFGGPWIDALFT 53 ++ GWL G R VPSP++D R + E LLVVHNISLPP +FGG I+ LFT Sbjct: 16 VDSGWLSGEGVRHVPSPNFDERQVASPHCDEREAIDLLVVHNISLPPNQFGGEGIEQLFT 75 Query: 54 GTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSI 113 +DP HP++ I L+VSAH L+RRDGE+VQ+VPF KRAWHAG S Y GR++CNDF+I Sbjct: 76 NCLDPSEHPYYEGIYQLKVSAHALVRRDGEVVQFVPFHKRAWHAGQSSYCGRDKCNDFAI 135 Query: 114 GIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDI-AKNMTGHCDIAPDRKTDPGPAFDWA 172 GIELEG+D + QY+ L A+T LI YP + A+++ GH DIAP RKTDPGP F WA Sbjct: 136 GIELEGSDDQPFEAEQYRALVALTAQLIQTYPQLSAEHIVGHSDIAPGRKTDPGPHFKWA 195 Query: 173 RFRVLVSK 180 +R + + Sbjct: 196 DYRKQLKQ 203 >UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5I4_9GAMM Length = 196 Score = 249 bits (636), Expect = 4e-65, Method: Composition-based stats. Identities = 94/179 (52%), Positives = 113/179 (63%), Gaps = 1/179 (0%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GWL GAR PSP+ + RP P +LVVHNISLPPG FGG ++ALF T+D P F Sbjct: 8 NGWLEGARHCPSPNCNVRPAPWAPDMLVVHNISLPPGRFGGDDVEALFCNTLDCSRDPSF 67 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 E+ L VSAH I R+G + Q+V RAWHAGVS + R CNDFSIGIELEGTD A Sbjct: 68 DELRGLEVSAHFFINREGALTQFVSCHDRAWHAGVSTWGSRVNCNDFSIGIELEGTDYQA 127 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKN-MTGHCDIAPDRKTDPGPAFDWARFRVLVSKET 182 Y D QY L+++ L P +A+ + GH DIAP RKTDPG AFDW R R + + Sbjct: 128 YEDMQYAMLSSLIGELRCRMPSLARGPIVGHSDIAPGRKTDPGEAFDWNRLRQGLRSGS 186 >UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=22 Tax=Gammaproteobacteria RepID=A8FQB8_SHESH Length = 205 Score = 248 bits (633), Expect = 9e-65, Method: Composition-based stats. Identities = 104/176 (59%), Positives = 125/176 (71%), Gaps = 2/176 (1%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GW+ ARR SPH++ RP +E +LLV+HNISLP G FG +ID LF G +D A F Sbjct: 31 DGWINDARRCESPHFNHRPLNE-VSLLVIHNISLPAGCFGESYIDQLFKGCLDVSADASF 89 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 ++ L VSAH LIRRDGE+VQYV RAWHAGVS Y RE CNDF+IGIELEGTDTLA Sbjct: 90 IDLKGLEVSAHFLIRRDGELVQYVSCGDRAWHAGVSSYGSREGCNDFAIGIELEGTDTLA 149 Query: 125 YTDAQYQQLAAVTRALIDCYPDI-AKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 YT+ QY++L +T AL D YP + + GHCDIAP RKTDPG +FDW RF+ +S Sbjct: 150 YTEQQYRELKILTLALFDAYPMLNIDRVVGHCDIAPGRKTDPGESFDWQRFKKDLS 205 >UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 Tax=Betaproteobacteria RepID=B3R6P0_CUPTR Length = 205 Score = 245 bits (626), Expect = 5e-64, Method: Composition-based stats. Identities = 102/173 (58%), Positives = 123/173 (71%), Gaps = 2/173 (1%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GW+ ARRVPSP++D RPD L+V+HNISLPPG+FG I+A F +DP HPFF Sbjct: 20 DGWVPAARRVPSPNFDARPDGMPVDLVVLHNISLPPGQFGSGDIEAFFQNRLDPDKHPFF 79 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 A I ++VSAH L+ R GE+VQ+VP +RAWHAG S++ GR RCNDFSIGIE+EGTD + Sbjct: 80 ATIHQIQVSAHFLVTRSGELVQFVPCTQRAWHAGQSEFFGRARCNDFSIGIEIEGTDDVP 139 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 +T AQY AA+ RAL YP A + GH DIAP RKTDPGP FDW RF L Sbjct: 140 FTAAQYNTTAALVRALRAAYPVQA--IAGHSDIAPGRKTDPGPHFDWNRFARL 190 >UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 Tax=Proteobacteria RepID=D0J795_COMTE Length = 209 Score = 245 bits (626), Expect = 5e-64, Method: Composition-based stats. Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 2/182 (1%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 + + GW AR++ SP++ RP D L+V+H+ISLPPG++G + LFT +D A Sbjct: 13 LPWQAGWYGAARQLRSPNFGPRPADAQIDLVVIHSISLPPGQYGTGAVQQLFTNQLDWDA 72 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HP++ I L VS+H I R GEI Q+V D RAWHAGVSQ++GRERCND SIGIELEG Sbjct: 73 HPYYQGIRGLEVSSHFFITRQGEIWQFVSCDDRAWHAGVSQWRGRERCNDDSIGIELEGL 132 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 + L++ QYQ L + A+ YP + + GH IAP RK DPGP FDW R ++ + + Sbjct: 133 EGLSFEAPQYQALQQLCMAIAAHYPV--RYIAGHEHIAPGRKQDPGPGFDWQRLQLQLGR 190 Query: 181 ET 182 Sbjct: 191 AD 192 >UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Gammaproteobacteria RepID=Q0AC58_ALHEH Length = 186 Score = 245 bits (626), Expect = 5e-64, Method: Composition-based stats. Identities = 99/175 (56%), Positives = 119/175 (68%), Gaps = 1/175 (0%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 G + A + PSP+ D RP L++H ISLPPG FGGPWID LFT + AHP+F Sbjct: 10 SGLIRPAHQHPSPNQDARPAGVAVDALIIHGISLPPGAFGGPWIDRLFTNRLPADAHPYF 69 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 A + LRVS H LIRRDG + QYVP +RAWHAG S+ GRERCNDF+IGIELEGTD Sbjct: 70 ARVHRLRVSCHLLIRRDGALTQYVPLHRRAWHAGQSRLAGRERCNDFAIGIELEGTDETP 129 Query: 125 YTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 YT+AQYQ L + R L+ +P + + GH D+AP RKTDPGPAFDWAR R + Sbjct: 130 YTEAQYQVLGPLCRTLMAAFPGITPERVVGHSDVAPGRKTDPGPAFDWARLRAAL 184 >UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWQ1_9GAMM Length = 219 Score = 244 bits (624), Expect = 9e-64, Method: Composition-based stats. Identities = 90/187 (48%), Positives = 113/187 (60%), Gaps = 6/187 (3%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGP------WIDALFTGTI 56 +EQG L V SP++ RPD L+V+HNISLPP EFG ++ A F + Sbjct: 26 IEQGLLSPCEFVASPNFGQRPDPNDIHLIVIHNISLPPSEFGLKNNQGEHFVRAFFQNQL 85 Query: 57 DPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE 116 DP+AHP+FA I +VSAH I RDG I Q+V FD RAWHAG S Y G CND+SIGIE Sbjct: 86 DPKAHPYFATIYQQQVSAHLFIERDGSITQFVSFDARAWHAGKSSYLGVPNCNDYSIGIE 145 Query: 117 LEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 LEG D + D QYQ L+ V A+ YP ++ GH DIA RK+DPG FDW + R Sbjct: 146 LEGDDYSEFDDRQYQALSGVIAAIYQAYPKTVNHLAGHSDIARGRKSDPGLYFDWVKLRN 205 Query: 177 LVSKETT 183 +V++ Sbjct: 206 MVNRNMV 212 >UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=51 Tax=Proteobacteria RepID=B2JH28_BURP8 Length = 212 Score = 242 bits (619), Expect = 4e-63, Method: Composition-based stats. Identities = 96/173 (55%), Positives = 121/173 (69%), Gaps = 3/173 (1%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GW+ AR++PSP+++ RP+ PTL+VVHNISLPP EFGGP I LF +D AHP++ Sbjct: 20 NGWVDEARQLPSPNFEARPNGARPTLIVVHNISLPPNEFGGPGITDLFLNRLDCDAHPYY 79 Query: 65 -AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 A + +RVSAH +IRRDG + QYV D+RAWHAG S + GRERCNDFSIGIELEG+D Sbjct: 80 DAHLRDVRVSAHFVIRRDGALEQYVSCDERAWHAGASNFFGRERCNDFSIGIELEGSDAS 139 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + AQY LA + R+L Y + + GH DIAP RKTDPGP F+W R + Sbjct: 140 PFERAQYATLAPLVRSLAAHYEIDS--LAGHSDIAPGRKTDPGPHFEWPRLQR 190 >UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Acidovorax RepID=A1TKH5_ACIAC Length = 209 Score = 242 bits (618), Expect = 5e-63, Method: Composition-based stats. Identities = 83/179 (46%), Positives = 107/179 (59%), Gaps = 2/179 (1%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 GW + A +PSP++ RP L+VVH+ISLPPGE+G + LFT +D AHP Sbjct: 22 WNGGWYLPAMALPSPNFGPRPAQAAIDLIVVHSISLPPGEYGTGEVQRLFTNALDWDAHP 81 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 ++A I L+VSAH I R G + Q+V RAWHAG S Y+GR+ CND SIGIELEG + Sbjct: 82 YYAGIRGLQVSAHFFIERGGRLWQFVDCGDRAWHAGPSAYRGRDNCNDDSIGIELEGLEG 141 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 + AQYQ LA + R + YP ++ GH +AP RK DPGP FDW R + Sbjct: 142 DTFEPAQYQALATLCRDIAQRYPV--AHVAGHEHVAPGRKRDPGPGFDWRELRSRLGSP 198 >UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_NEIFL Length = 199 Score = 239 bits (611), Expect = 3e-62, Method: Composition-based stats. Identities = 91/174 (52%), Positives = 117/174 (67%), Gaps = 2/174 (1%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 + + G + AR+ SP++ R DE +L+V+HNISLPP E+ ++ LFT I+P H Sbjct: 19 IWQNGRWLNARQTHSPNFSPREPDEDISLVVLHNISLPPFEYNTGAVENLFTNQINPDEH 78 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 PFF+ I LRVS+H I R GE VQ+V D A+HAGVS +QGRE+CN FSIGIELEG D Sbjct: 79 PFFSIIHTLRVSSHFFISRKGETVQFVSCDDMAYHAGVSSFQGREKCNAFSIGIELEGCD 138 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 +T+AQY L A+ A+ + YP A +TGH DIAPDRKTDPG FDW R + Sbjct: 139 FEPFTEAQYTSLQALLTAISEHYPIQA--VTGHQDIAPDRKTDPGHFFDWPRLQ 190 >UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D5333F Length = 196 Score = 239 bits (610), Expect = 4e-62, Method: Composition-based stats. Identities = 88/176 (50%), Positives = 117/176 (66%), Gaps = 1/176 (0%) Query: 7 WLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAE 66 L + SP+ D R D + P ++V+H ISLPPGE+GG ++ LF ++D +F E Sbjct: 21 LLKNVEYLNSPNQDDRRDGQDPEIIVIHGISLPPGEYGGSYVCDLFLNSLDTSVCEYFKE 80 Query: 67 IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYT 126 I+ L+VS+H I R G ++Q+VPF+ RAWHAG S Y+GRE CN FSIGIELEG D Y+ Sbjct: 81 ISTLKVSSHLFINRLGRVMQFVPFNSRAWHAGESAYRGREMCNHFSIGIELEGQDNDEYS 140 Query: 127 DAQYQQLAAVTRALIDCYPDI-AKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 D QY LA + AL + YP I A+++ GH DIAP RKTDPGPAF+W R +S + Sbjct: 141 DIQYVILAKIINALFEFYPRISARDIVGHSDIAPKRKTDPGPAFNWKRLYREISGQ 196 >UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Proteobacteria RepID=B1XX10_LEPCP Length = 209 Score = 238 bits (609), Expect = 5e-62, Method: Composition-based stats. Identities = 87/178 (48%), Positives = 114/178 (64%), Gaps = 2/178 (1%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 +GW ARRVPSP++ RP + L VVH+ISLPPG +GG I+ FT +DP AHP Sbjct: 13 WSRGWHRDARRVPSPNFGSRPVGASIDLAVVHSISLPPGVYGGDAIERFFTNRLDPAAHP 72 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 +FA +A L+VSAH +IRRDGE++Q+V +RAWHAG S ++GR CND S+GIELEG + Sbjct: 73 YFATLAGLQVSAHFVIRRDGELLQFVDVRERAWHAGASSWRGRSNCNDHSLGIELEGLEG 132 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 + AQY+ LA + R +P + + GH IAP RK DPG FDW R + Sbjct: 133 QRFEPAQYRVLAGLLRDARTAWPL--REVVGHEHIAPGRKHDPGAGFDWCRLARHLRG 188 >UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4 Tax=Proteobacteria RepID=A4SVB0_POLSQ Length = 225 Score = 237 bits (605), Expect = 1e-61, Method: Composition-based stats. Identities = 88/178 (49%), Positives = 114/178 (64%), Gaps = 6/178 (3%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEF----GGPWIDALFTGTID 57 L EQGWL A+ SP+ D RP++ P LLV+H+ISLPPGEF +I F +D Sbjct: 33 LDEQGWLGFAQWRESPNQDARPENIEPDLLVIHHISLPPGEFKAQDSSQYIIDFFQNRLD 92 Query: 58 PQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117 P HP+FAEI +VS+H LI R G ++Q+V +AWHAG+S + GRE+CNDFSIGIEL Sbjct: 93 PNRHPYFAEIEGQKVSSHFLITRSGRLIQFVSTKHKAWHAGLSSFLGREKCNDFSIGIEL 152 Query: 118 EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 EG + + QY+ L+ L YP + GH DIAP+RKTDPG +FDW RF+ Sbjct: 153 EGDGETPFEEIQYKVLSETVGKLSATYPSL--QFAGHSDIAPERKTDPGISFDWKRFQ 208 >UniRef50_A6T2C3 Negative regulator of beta-lactamase expression n=2 Tax=Oxalobacteraceae RepID=A6T2C3_JANMA Length = 211 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 102/178 (57%), Positives = 129/178 (72%), Gaps = 4/178 (2%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 GW VGA+ +PSP++D R + LLV+HNISLPPG+FGGP+I LF +D +A P+F Sbjct: 20 GWAVGAQHLPSPNFDARVEGTEIALLVIHNISLPPGQFGGPFIADLFLNRLDYEADPYFD 79 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 ++ LRVSAH LIRRDG ++Q+V + RAWHAG S + G+ERCNDFSIGIELEGTD A+ Sbjct: 80 QLRPLRVSAHFLIRRDGTVMQFVSANDRAWHAGASSFCGQERCNDFSIGIELEGTDFEAF 139 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF--RVLVSKE 181 D QY LAA+T AL YP + ++TGH IAP RKTDPGP FDWA + R LV ++ Sbjct: 140 ADEQYAALAALTVALKAAYPLL--HVTGHEHIAPGRKTDPGPFFDWAGYEERYLVQQK 195 >UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A1AXT9_RUTMC Length = 174 Score = 228 bits (582), Expect = 7e-59, Method: Composition-based stats. Identities = 80/176 (45%), Positives = 115/176 (65%), Gaps = 3/176 (1%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 ++ L +++ SP+++ RP+ + +L+V+H+ISLPPG+F I+ FT +D H Sbjct: 1 MINNHRLENIKQINSPNFNKRPN-QAISLIVIHSISLPPGKFNNNHIEKFFTNQLDTSQH 59 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 P+F I L+VSAH LI+R+G I+Q+VPF++RAWHAG S Y+G+ CNDFSIGIEL+G D Sbjct: 60 PYFKSIKDLKVSAHLLIKRNGMIIQFVPFNQRAWHAGKSNYKGKHNCNDFSIGIELQGDD 119 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 +Y QY+ L V L YP + GH DI+P RKTDPGP F W++ + Sbjct: 120 NTSYELVQYKVLNNVIDLLKSHYPI--STIKGHSDISPIRKTDPGPYFKWSKLHAI 173 >UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkholderiales RepID=A4G8Q1_HERAR Length = 185 Score = 227 bits (578), Expect = 2e-58, Method: Composition-based stats. Identities = 85/156 (54%), Positives = 110/156 (70%), Gaps = 2/156 (1%) Query: 26 ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIV 85 +LLV+HNISLPP +FGGP+I LF +D A P+F ++ LRVSAH LIRRDG ++ Sbjct: 1 MDISLLVIHNISLPPEQFGGPFIADLFLNQLDYAADPYFEQLKLLRVSAHFLIRRDGNVM 60 Query: 86 QYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYP 145 Q+V RAWHAG S + G+ERCNDFSIGIELEGTD + +AQY LA++T AL YP Sbjct: 61 QFVSARDRAWHAGASSFCGQERCNDFSIGIELEGTDFQPFEEAQYIALASLTVALKQAYP 120 Query: 146 DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 ++++GH IAP RKTDPGP F+W ++ L K+ Sbjct: 121 L--RHVSGHEQIAPGRKTDPGPFFNWTEYQALYRKK 154 >UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ97_CHRSD Length = 197 Score = 225 bits (573), Expect = 7e-58, Method: Composition-based stats. Identities = 106/183 (57%), Positives = 126/183 (68%), Gaps = 6/183 (3%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 WL AR V SP+++ RP+DE + LV+H+ISLPPG FGG I+ LFT +DP AHP+FA Sbjct: 7 HWLTAARHVASPNHNARPEDE-VSALVLHSISLPPGRFGGDAIERLFTNRLDPAAHPYFA 65 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY----QGRERCNDFSIGIELEGTD 121 I LRVSAH LIRRDGE VQ+V FD+RAWHAG S++ + R NDFSIGIELEG + Sbjct: 66 TIHALRVSAHVLIRRDGEAVQFVGFDRRAWHAGRSRWWDGHRERRELNDFSIGIELEGDE 125 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 AY +AQY+ LA V AL YP + +T H IAP RKTDPGPAFDWA FR V Sbjct: 126 IHAYREAQYRCLARVFLALHARYPALTLARVTSHARIAPLRKTDPGPAFDWAYFRQCVQA 185 Query: 181 ETT 183 TT Sbjct: 186 LTT 188 >UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amidase, AmpD (Negative regulator of AmpC) n=1 Tax=Limnobacter sp. MED105 RepID=A6GR52_9BURK Length = 187 Score = 220 bits (562), Expect = 1e-56, Method: Composition-based stats. Identities = 76/177 (42%), Positives = 92/177 (51%), Gaps = 4/177 (2%) Query: 1 MLLEQGWLVG--ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDP 58 M L++GW+ R+ SP+ D RP LVVH ISLP I LF +D Sbjct: 1 MWLDEGWIEEDWVHRLQSPNQDARPMGTVVDTLVVHCISLPERGRDSALITDLFLNRLDC 60 Query: 59 QAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELE 118 +H F E+ L VS+H LI RDG + Q+V +KRAWHAG+S R N FSIGIEL Sbjct: 61 HSHASFGELIGLHVSSHFLIDRDGSVTQFVSCEKRAWHAGISAAMDRSNFNHFSIGIELL 120 Query: 119 GTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 G + QY L + L YP K H +IAP RKTDPGP FDW R Sbjct: 121 GDIYTPFEQTQYASLKRLALELQARYPL--KYAMAHSEIAPTRKTDPGPFFDWKGLR 175 >UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A0L5K2_MAGSM Length = 183 Score = 217 bits (554), Expect = 1e-55, Method: Composition-based stats. Identities = 99/167 (59%), Positives = 115/167 (68%), Gaps = 1/167 (0%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 R +PSPH D RP E LLVVH ISLPPG+FGG WID LF G +D QA P+F IA LR Sbjct: 6 RYLPSPHCDERPVGEVVELLVVHAISLPPGQFGGGWIDDLFMGVLDAQADPYFVGIASLR 65 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQ 131 V+AH LI RDG I QYVP KR WHAG S +QGR RCNDFSIG+ELEG + + QYQ Sbjct: 66 VAAHFLIGRDGGITQYVPLSKRGWHAGESVWQGRPRCNDFSIGVELEGDEEHPFAAIQYQ 125 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 +LA +TR L P + + + GH DIAP RK DPG FDW RFR ++ Sbjct: 126 RLAQLTRTLQQRLPRLVE-VVGHQDIAPGRKWDPGRQFDWPRFRAML 171 >UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A2_BRUC2 Length = 268 Score = 210 bits (534), Expect = 2e-53, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 21/180 (11%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 ++LE+ A PSP++ R D + P L++H L + + + Sbjct: 15 LVLEKPDYKEAELDPSPNFGPRRDGKQPVFLILHYTGLVTAKEAMDVLKS---------- 64 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 + VSAH ++ DG +VQ V RAWHAG S ++G N SIGIE+ Sbjct: 65 -------PEMEVSAHYVVHEDGRVVQMVSEKARAWHAGKSFWKGETDINSASIGIEIVNP 117 Query: 121 D----TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + DAQ + + + + + + +N+ H DIAP RKTDPG +F W R Sbjct: 118 GVLENYPPFHDAQIEAVIRLCQDICKRHEIRPENVLAHSDIAPARKTDPGQSFPWKRLHD 177 >UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NMR2_9RHOB Length = 227 Score = 196 bits (500), Expect = 2e-49, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 75/164 (45%), Gaps = 17/164 (10%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 PSP++ R D PTL+V+H ++ D DP V Sbjct: 11 WHPSPNFGPRRDGLKPTLIVLHYTAMHSA-------DDALERLCDPA----------HEV 53 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 SAH LI RDG + Q V RAWHAG ++ G+ N SIGIEL+ T + Q Sbjct: 54 SAHYLIGRDGTLWQLVHEPDRAWHAGAGEWHGQTDINSRSIGIELDNAGTHPFAAPQMSA 113 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 L + ++ + + + GH D+AP RK DPGP FDW R Sbjct: 114 LDHLLPDIMGRWNIPPQGVIGHSDMAPGRKIDPGPKFDWQRLER 157 >UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CW21_9RHOB Length = 418 Score = 195 bits (497), Expect = 5e-49, Method: Composition-based stats. Identities = 57/164 (34%), Positives = 80/164 (48%), Gaps = 17/164 (10%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 PSP++ R D P+L+V+H ++ A DP++ V Sbjct: 202 WHPSPNFGPRRDGLKPSLVVLHYTAMNSA-------RAALERLCDPES----------EV 244 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 SAH LI DG + Q V + RAWHAGV ++QG+ N SIGIEL+ + AQ + Sbjct: 245 SAHYLIGCDGTLWQMVREEDRAWHAGVGEWQGQSDINSRSIGIELDNRGDHPFAQAQIRV 304 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 L + ++ + A + GH D+AP RK DPGP FDW R Sbjct: 305 LERLLPQIMTRWSIPAAGVIGHSDMAPGRKHDPGPRFDWLRLER 348 >UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodospirillaceae RepID=Q2RVT4_RHORT Length = 241 Score = 194 bits (493), Expect = 1e-48, Method: Composition-based stats. Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 21/163 (12%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 SP+ D RP + +LV+H +P + A +DPQA +VSAH Sbjct: 17 SPNADDRPPGQIIDMLVIHYTGMPSAQ-------AALARLLDPQA----------QVSAH 59 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQYQ 131 LI DG + V +RAWHAGVS + GR N SIGIEL + +AQ Sbjct: 60 WLIDEDGTAYKLVEERRRAWHAGVSAWGGRPGVNARSIGIELVNPGHEFGYRPFPEAQMT 119 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L A+ R +++ +P A ++ GH D+AP RK DPG FDW R Sbjct: 120 TLIALGRGILERHPIPAAHVVGHADVAPTRKEDPGELFDWQRL 162 >UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodospirillum centenum SW RepID=B6IRH2_RHOCS Length = 254 Score = 194 bits (493), Expect = 1e-48, Method: Composition-based stats. Identities = 54/167 (32%), Positives = 75/167 (44%), Gaps = 21/167 (12%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 +PSP++ R +LV+H + E DP A VS Sbjct: 9 LPSPNHGPRRPGAAIDMLVLHYTGMRTAEEA-------LERLCDPAA----------EVS 51 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT----DTLAYTDAQ 129 AH +I DG + + V D+RAWHAG+S ++G N SIGIEL + +AQ Sbjct: 52 AHYVIDEDGTLYRLVREDRRAWHAGLSFWRGERDVNSRSIGIELVNPGHAFGYRPFPEAQ 111 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 L ++ L+ Y ++ GH D+AP RK DPG FDW R Sbjct: 112 MATLESLAADLVAHYRIPPLHVLGHSDVAPARKEDPGELFDWPRLAR 158 >UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=6 Tax=Alphaproteobacteria RepID=B0T844_CAUSK Length = 243 Score = 193 bits (490), Expect = 3e-48, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 23/172 (13%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 +G PSP++D R P +V+H + GE A DP+A Sbjct: 5 IGFVDAPSPNFDAR--KSVPDCVVLHYTGMETGE-------AALARMCDPEA-------- 47 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----A 124 +VSAH ++ DG + + VP ++RAWHAG + ++G + N SIG+E+ Sbjct: 48 --KVSAHYMVEEDGRVFRLVPEERRAWHAGAAFWKGVKDINSASIGVEIVNPGHEFGYRP 105 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + DAQ + + + + + GH DIAP RK DPG F W R Sbjct: 106 FPDAQVAAVINLLADIRSRWTIDDDRILGHSDIAPGRKIDPGELFPWKRLAQ 157 >UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodobacterales RepID=Q28T26_JANSC Length = 227 Score = 192 bits (488), Expect = 6e-48, Method: Composition-based stats. Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 17/166 (10%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 A+ + SP++ R D P L+V+H ++P + DP Sbjct: 3 AKSLQSPNFGPRRDGLKPELVVIHYTAMPNCASAAKVL-------CDPAR---------- 45 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQY 130 VSAH LI RDG+++ VP D RAWHAG +++G N SIGIEL+ +++ Sbjct: 46 EVSAHYLIGRDGDVLNLVPEDMRAWHAGKGEWRGAGDVNSRSIGIELDNDGLTPFSEPLM 105 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 L + ++ + + GH D+AP RK DPG FDW R Sbjct: 106 AALETLLPTVLAAWRIGPDGVIGHSDMAPGRKIDPGRRFDWQRLAR 151 >UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XME2_HIRBI Length = 236 Score = 191 bits (487), Expect = 6e-48, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 23/166 (13%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 + PS ++D R + ++LV+H + G+ DP+A +V Sbjct: 10 QAPSVNFDERR--QPLSMLVLHYTGMQTGQAALG-------RMCDPEA----------KV 50 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT----LAYTDA 128 +AH ++ DG I Q V KRAWHAGV ++G + N SIGIE+ + + Sbjct: 51 AAHYMVEEDGRIFQLVDESKRAWHAGVGTWRGLDDINSRSIGIEIVNGGHDYGLPDFPEI 110 Query: 129 QYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 Q + A+ R ++ + + ++ GH DIAP RK DPG F W + Sbjct: 111 QIDAVIALCRDVLSRHQILQSDIVGHSDIAPGRKDDPGEKFPWEKL 156 >UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphaproteobacteria RepID=B6JBX5_OLICO Length = 273 Score = 188 bits (477), Expect = 9e-47, Method: Composition-based stats. Identities = 55/166 (33%), Positives = 75/166 (45%), Gaps = 23/166 (13%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 SP+ D R L+V+H +P DA D +A +VS+ Sbjct: 37 ASPNLDERCAP--VELIVLHYTGMPEE-------DAALARLCDAEA----------KVSS 77 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT----LAYTDAQY 130 H ++R +GE+VQ V +KRAWHAGVS ++G N SIGIE+ Y D Q Sbjct: 78 HYVVRENGEVVQLVAEEKRAWHAGVSCWRGASDINSRSIGIEIVNPGHDGDCPPYPDPQI 137 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + A+ R ++ + H DIAP RK DPG F W R Sbjct: 138 AAVIALCRDILARNGIRRDQVLAHSDIAPTRKQDPGEWFPWGRLAA 183 >UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D9N0_9RHOB Length = 237 Score = 186 bits (473), Expect = 3e-46, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 17/160 (10%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PS ++ R + P+L+V+H ++ + W+ +P++ +VS+ Sbjct: 18 PSQNFGPRRNGLRPSLIVLHYTAMNDADGACRWL-------CNPES----------QVSS 60 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLA 134 H ++ G + V RAWHAG + G + N SIGIE+ T + AQ + Sbjct: 61 HYVVTEVGAVWSLVEEADRAWHAGAGTWGGLDDINSRSIGIEISNAGTHGFAAAQMDAVE 120 Query: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 A+ ++D + A+ + GH D AP RK DPG FDW R Sbjct: 121 ALVAGIMDRWDIPAEGVIGHSDFAPGRKIDPGGRFDWRRL 160 >UniRef50_A8TR24 Negative regulator of beta-lactamase expression n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR24_9PROT Length = 247 Score = 186 bits (473), Expect = 3e-46, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 75/161 (46%), Gaps = 21/161 (13%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PSP++ RP +L++H + E DP A +VSA Sbjct: 11 PSPNHGPRPVGAPIDILLLHYTDMTRAE-------DALDRMCDPAA----------QVSA 53 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQY 130 H L+ DG + + V D+RAWHAGVS + G N SIGIE+ + D Q Sbjct: 54 HYLVGEDGRVWRMVAEDRRAWHAGVSWWDGDSDINSRSIGIEISNPGHSHGYRPFPDVQM 113 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 L ++ R ++ +P A + GH D++P RK DPG FDW Sbjct: 114 SALESLCRGILARHPIPANRVLGHSDVSPGRKIDPGHLFDW 154 >UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHF6_9RHIZ Length = 256 Score = 185 bits (471), Expect = 4e-46, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 22/173 (12%) Query: 8 LVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 LVG+ RV +++ R P+LL++H + E W+ + Sbjct: 9 LVGSVRVAE-NHEPRRGGVRPSLLILHYTGMSSAEKAIDWLARAESN------------- 54 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL---- 123 VS H +I DG I Q VP RAWHAG S ++G N SIGIE++ Sbjct: 55 ----VSCHYVIDEDGRITQLVPESLRAWHAGASFWRGETDINSHSIGIEIQNPGHQHGYP 110 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + AQ Q + A+ + + + A + H DIAP RK DPG F+WA Sbjct: 111 DFPAAQMQAVIALGKDIAQRHRMAADAVLAHSDIAPGRKIDPGEKFNWALLAR 163 >UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6 Tax=Sphingomonadales RepID=A5V2C7_SPHWW Length = 241 Score = 185 bits (470), Expect = 7e-46, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 23/168 (13%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 PSP++D R T+LV+H + D + +VS Sbjct: 10 CPSPNHDER--TLPITMLVLHYTGMA-----------------DAASAIARLTDPEAKVS 50 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQ 129 +H L+ DG++++ VP D+RAWHAG S ++G N SIGIE+ + Q Sbjct: 51 SHYLVAEDGQVMRLVPEDRRAWHAGQSSWRGVTDVNSASIGIEIVNPGHELGYRPFPKPQ 110 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 L + + +P N+ GH D+AP RK DPG FDW L Sbjct: 111 MDALIPLISDITSRHPIEPANVVGHSDVAPRRKQDPGELFDWELLGKL 158 >UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DDM5_MYXXD Length = 203 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 23/172 (13%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 PSP+ + R +V+H+ + G W+ +V Sbjct: 50 NAPSPNQNSR-GGTKIDTIVMHHTATNNGAGDLSWMRN-----------------PQSKV 91 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR-ERCNDFSIGIELEGTDT--LAYTDAQ 129 SAH ++ RDG+I Q V DKRAWHAG + G N+ SIGIE+ + +T+AQ Sbjct: 92 SAHYMVDRDGKIYQLVGDDKRAWHAGKGELHGVPSDINNRSIGIEIVNDGSGKTPFTEAQ 151 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWARFRVLVS 179 Y+ L +T L + KN+ GH D+A RK DP P FDW R R +S Sbjct: 152 YKSLTQLTGYLKQQHNIPMKNIVGHADVAVPKGRKNDPAPNFDWNRLRKGIS 203 >UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=33 Tax=Alphaproteobacteria RepID=Q07PU2_RHOP5 Length = 294 Score = 182 bits (462), Expect = 5e-45, Method: Composition-based stats. Identities = 55/165 (33%), Positives = 73/165 (44%), Gaps = 21/165 (12%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 +PSP++ R P ++V+H +P E G GT VS Sbjct: 42 IPSPNFGDRNKGRAPDMIVLHYTGMPDVE--GALARLCQDGT---------------EVS 84 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT-LAYTDA---Q 129 AH ++ DG IVQ VP KRAWHAG++ + G E N SIGIE+ Y D Q Sbjct: 85 AHYVVLEDGRIVQCVPEAKRAWHAGLAFWAGEEDINSCSIGIEIVNRGHDWGYPDFPLRQ 144 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + A+ R +I + H D+AP RK DPG F W Sbjct: 145 VAAVIALCRGIIIRRGIQPHRVLAHSDVAPARKQDPGEKFPWRAL 189 >UniRef50_Q093H8 Negative regulator of beta-lactamase expression n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q093H8_STIAU Length = 280 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 23/171 (13%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 PSP+++ R + +V+H+ + G + VS Sbjct: 128 APSPNFNER-GGKDIDTIVLHHTASNNGAGDLAHMRN-----------------PASEVS 169 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR-ERCNDFSIGIELEGTDT--LAYTDAQY 130 AH ++ RDG+I Q V KRAWHAG S+ G N SIGIE+ + A+T+AQY Sbjct: 170 AHYMVDRDGKIYQLVNDSKRAWHAGKSELHGVPTDVNSRSIGIEIVNDGSGKTAFTEAQY 229 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWARFRVLVS 179 + L + L + N+ GH D+A RK DP FDW R R +S Sbjct: 230 KSLTQLVGYLKQEHGVPMNNIVGHKDVAVPKGRKNDPASNFDWNRLRTGIS 280 >UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BV14_GRABC Length = 250 Score = 180 bits (457), Expect = 2e-44, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 26/173 (15%) Query: 8 LVGARRVPSPHYDCRPDDET-----PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 + R PSP+YD RP +LV+H + DP+A Sbjct: 8 MPPIRERPSPNYDARPSATAGTPGAVDMLVLHYTGMTSAAAAID-------RLCDPEA-- 58 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 RVS+H ++ DG + + V RAWHAG+S ++GR NDFS+GIE+ Sbjct: 59 --------RVSSHYVVEEDGTVWRLVWEQYRAWHAGISHWRGRSWLNDFSVGIEIVNPGH 110 Query: 123 LA----YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 + +AQ + + A+ A++ + A ++ H DIAPDRK DPG FDW Sbjct: 111 EWGYRAFPEAQMRSVLALAHAIVRQHSIPAAHIVAHSDIAPDRKQDPGELFDW 163 >UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0F4W8_9RHOB Length = 238 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 20/165 (12%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 + PSP++ R P+++V+H ++ + DP++ V Sbjct: 9 QQPSPNFGIRRGGVIPSMIVLHYTAMKSSK-------DAIQRLSDPKS----------EV 51 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA--YTDAQY 130 SAH LI G++ Q V KRAWHAG + N +SIGIEL+ + + + Q Sbjct: 52 SAHYLIDEAGKVTQLVDEQKRAWHAGQGCWGEINDINSYSIGIELDYCPSAKCNFDERQI 111 Query: 131 QQLAAVTRALIDCY-PDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L + ++ + + H D+AP RK DPG F W + Sbjct: 112 SSLEKLLFDILKRRSEIRPEFIIAHSDMAPGRKFDPGMYFPWKKL 156 >UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=26 Tax=Alphaproteobacteria RepID=B2IHS0_BEII9 Length = 304 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 57/166 (34%), Positives = 74/166 (44%), Gaps = 22/166 (13%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PSP++ R P +++H+ ++ GE A DP A VSA Sbjct: 28 PSPNHGDR-KGRQPDAIILHHTAMVSGE-------AALLRLCDPAA----------EVSA 69 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT----DTLAYTDAQY 130 H L+ DG I Q V RAWHAG S + G N SIGIEL + Y +AQ Sbjct: 70 HYLVWEDGRISQLVAEKHRAWHAGQSYWAGERDMNSVSIGIELVHPGPEGGSPPYEEAQI 129 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 A+ ++ A + GHCDIAPDRK DP F WA+ Sbjct: 130 AATIALCLDIMRRRSIPAARVLGHCDIAPDRKDDPSAHFPWAQLAA 175 >UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7L0_9BURK Length = 196 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 27/173 (15%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 + GW A+ VPSP++ RP L+V+H+ISLPPG +GGP + LFT T+D AHP Sbjct: 29 WDAGWWSEAQHVPSPNFGPRPASAVVDLVVIHSISLPPGVYGGPEVQQLFTNTLDWDAHP 88 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 WHAG S Y+ R+ CND SIGIELEGT+ Sbjct: 89 XXXXXXX-------------------------WHAGKSCYRDRDHCNDDSIGIELEGTEE 123 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 +T QY+ L + RA+ Y + + GH IAP RKTDPGP F+W+ + Sbjct: 124 DRFTPPQYESLHRLCRAIAQNYQI--QYLAGHEHIAPGRKTDPGPGFEWSELK 174 >UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HXI6_9SPHI Length = 299 Score = 176 bits (446), Expect = 4e-43, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 21/163 (12%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 V + ++ R P +++H+ + E + + Sbjct: 65 EWVGTTNFSIRR----PNFVIIHHTAQDSLEQTIRTF-----------------TLPRTQ 103 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQ 131 VS+H +I +DG IVQ + R+WHAG ++ N SIGIEL+ + +AQ + Sbjct: 104 VSSHYVIAKDGTIVQMLNDYLRSWHAGRGKWGSVTDLNSVSIGIELDNNGFEPFPEAQIE 163 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L + + L Y N GH DIAP RK DP F W + Sbjct: 164 SLLILCKRLKWKYGIPTANFIGHSDIAPSRKVDPNRFFPWDQL 206 >UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=10 Tax=Pseudomonas RepID=Q4ZZT4_PSEU2 Length = 283 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 72/173 (41%), Gaps = 36/173 (20%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PS ++D R +V+H S + H VSA Sbjct: 51 PSVNFDGRAQ-----YVVMHYTST--------------------SLEHSLQLLTHGEVSA 85 Query: 75 HCLIRRD--GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---------TL 123 H LI D I + V + RAWHAG S+++GR N SIGIE+ Sbjct: 86 HYLIGDDSKATIYKLVDENARAWHAGESEWEGRTWLNSSSIGIEIVNPGFKETPTGRLWY 145 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 YT+AQ Q + + + ++ K++ GH DIAP RK DPGP F W R Sbjct: 146 PYTEAQTQSIIVLLKDIVKRNRIDPKHIIGHSDIAPLRKQDPGPLFPWKRLAA 198 >UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 Tax=Sphingobacteriaceae RepID=C6XXC7_PEDHD Length = 276 Score = 172 bits (436), Expect = 5e-42, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 69/161 (42%), Gaps = 22/161 (13%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 V S ++ R P +V+H+ + I +V Sbjct: 65 WVGSVNFGIR----KPNFVVLHHTAQDSSAQTLKTF-----------------TITRTQV 103 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S+H +I RDG++ Q V RA HAGVS++ N SIGIE++ Y++ Q + Sbjct: 104 SSHYVIGRDGKVFQMVNDYLRANHAGVSRWGNEMDLNSSSIGIEIDNNGKEPYSEVQIKS 163 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR 173 L V RAL Y N GH DIAP RK DP F W R Sbjct: 164 LITVLRALKKRYGIPTANFIGHADIAPGRKNDP-RNFPWKR 203 >UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Bacteroidetes RepID=A5FA27_FLAJ1 Length = 301 Score = 171 bits (434), Expect = 8e-42, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 21/163 (12%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 + + +++ R P+ +++H+ + + T + Sbjct: 87 EWIGTVNFNLR----KPSFVIIHHTAQDSLQQTINTFTKTRT-----------------Q 125 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQ 131 VS+H +I +G++VQ + RAWHAG S + N SIGIEL+ +T+AQ Sbjct: 126 VSSHYIISENGKVVQMLNDYLRAWHAGNSTWGKNTDLNSSSIGIELDNNGFKPFTEAQIS 185 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L A+ L Y +N GH DIAP RK DP F W Sbjct: 186 SLVALLTKLKKDYNIPTQNFLGHADIAPGRKQDPSALFPWKTL 228 >UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YHQ4_9FLAO Length = 319 Score = 171 bits (433), Expect = 1e-41, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 39/169 (23%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 ++ R L++H +LP + VSAH L Sbjct: 80 NFRQR-------YLILHYTALPD--------------------DKSITVLTQQAVSAHYL 112 Query: 78 IRRDG--EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----------AY 125 + G EI Q V +KR++HAGVS ++ + ND SIGIE+ T + Sbjct: 113 VNNTGDNEIYQLVDENKRSYHAGVSAWRNDKNLNDTSIGIEIVNTGYTTDATGKRTFAPF 172 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 +D Q +++AA+ + ++ Y N+ GH DIAP RK DPGP F W + Sbjct: 173 SDDQVKKVAALVKDIVTRYQIQPTNVLGHSDIAPTRKQDPGPMFPWKKL 221 >UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xanthomonadaceae RepID=Q3BNF4_XANC5 Length = 268 Score = 169 bits (429), Expect = 4e-41, Method: Composition-based stats. Identities = 53/164 (32%), Positives = 70/164 (42%), Gaps = 19/164 (11%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 A+ VPSP+YD R P L+V+H ++ + Sbjct: 37 AQWVPSPNYDTRR----PILIVLHFTD---------------QQSVRQSLSTLRGRNSGG 77 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQY 130 RVSAH LI DG+ Q V +RAWH G ++ N SIGIEL+ + + AQ Sbjct: 78 RVSAHYLIGEDGQRYQLVSDGQRAWHGGAGRWGTITDINSASIGIELDNDGSEPFAPAQI 137 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L + L + GH D+AP RK DPGP F W R Sbjct: 138 DSLLVLLDDLCQRLRIPRTQIVGHEDVAPTRKNDPGPLFPWKRL 181 >UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BSD7_9RICK Length = 248 Score = 168 bits (427), Expect = 6e-41, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 24/165 (14%) Query: 16 SPHYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 SP++D R E ++ H + + T + ++ +VS Sbjct: 13 SPNFDVKKRRVKE-VKFIIFHYTGMKKE-------NQAITRLTNSKS----------KVS 54 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQ 129 +H LI+ +GEI+ VP AWHAG+S ++ + N +SIGIE+ ++ Q Sbjct: 55 SHYLIKNNGEILTLVPDLYVAWHAGISSWKNYKSINKYSIGIEISNPGHEYSYKKFSKEQ 114 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + + ++ LI Y + GH DIAPDRK DPG F W Sbjct: 115 VKSIIKLSTYLIKKYNIKPNFILGHSDIAPDRKKDPGEKFPWKYL 159 >UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax=Enterobacteriaceae RepID=C5BFW7_EDWI9 Length = 294 Score = 168 bits (425), Expect = 1e-40, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 37/176 (21%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 + +E LV+H ++ + +VSAH LI Sbjct: 48 FTAVGQNERIRFLVLHYTAVDDVS--------------------SLNILTKEQVSAHYLI 87 Query: 79 RRD-----GE--IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---------- 121 ++ G+ ++Q V +KRAWHAG+S + GR ND SIGIE+ Sbjct: 88 PKEPKSIHGQPVVLQLVDENKRAWHAGISSWNGRSGLNDTSIGIEIVNLGYTDNMLGQRT 147 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 YT+ Q +AA+ + +++ Y N+ GH DIAP RK DPG F W + Sbjct: 148 WYPYTEKQIAAVAALAKDIVNRYHIEPDNVVGHSDIAPLRKQDPGKLFPWEHLAAM 203 >UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 Tax=Candidatus Pelagibacter ubique RepID=Q4FPN2_PELUB Length = 247 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 22/164 (13%) Query: 16 SPHYDCR-PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 SP+++ + + ++ H + + + VS Sbjct: 10 SPNFNPKKRTSKQIKFIIFHYTGMKSESDALKRLTEI-----------------QSEVSC 52 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQY 130 H LI+ +GEIV+ VP AWHAG S ++ + N SIGIE+ +T Q Sbjct: 53 HYLIKNNGEIVKIVPDLYIAWHAGKSSWKNYKSLNQNSIGIEITNPGHEYGYKNFTQKQI 112 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L +++ LI Y KN+ GH DIA RK DPG F W Sbjct: 113 TTLVKLSKFLIKKYKINPKNILGHSDIAVLRKKDPGEKFPWEYL 156 >UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protein n=2 Tax=Leptotrichia RepID=C9MVU9_9FUSO Length = 322 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 27/168 (16%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 Y + + +++H ++ + + VSAH LI Sbjct: 87 YSSKGQNYRQRFIILHYTAM--------------------DRDGSLRALTNNEVSAHYLI 126 Query: 79 R--RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT-----LAYTDAQYQ 131 ++ + V ++RAWHAG S+++ + ND SIGIE+ + + D Q + Sbjct: 127 SNQKNDPVFYLVDENRRAWHAGASEWKTSKNLNDSSIGIEIVNSGNVSGSFEPFRDFQIK 186 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 +A + + L D Y A N+ GH DIAP RK DPGP F W + Sbjct: 187 DVAVLVKYLADKYEIPATNILGHSDIAPQRKPDPGPLFPWEELYRKYN 234 >UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VV46_9PROT Length = 238 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 67/172 (38%), Gaps = 22/172 (12%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 V +PSP+Y R + TL+V+H +P E + G Sbjct: 3 VPIEDLPSPNYSSR-EGTPITLVVLHYTGMPSAEEALDRLRDPEAG-------------- 47 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---- 124 VS+H I +DG IV+ V RA HAG+ + N SIGIE+ L Sbjct: 48 ---VSSHYFIEQDGRIVRLVDEKDRAHHAGLGAWGPVRDVNSASIGIEIVNKGHLWGYED 104 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + D Q L + + + H D+AP RK DPG F W R Sbjct: 105 FPDLQIDALIGLMTEIYRRHRLGPLAAIAHSDLAPARKDDPGERFPWDRLAA 156 >UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 Tax=Proteobacteria RepID=A9KGI9_COXBN Length = 257 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 37/174 (21%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 P+ ++D R LV+H + + D+L VS Sbjct: 10 PAKNFDKR-----IRFLVLHYTA-------KNFEDSLE-----------ILTQEAFGVSG 46 Query: 75 HCLIRR---DG--EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD-------- 121 H LI DG +I Q VP RAWHAGVS +QGR ND SIGIE+ Sbjct: 47 HYLIPESSIDGKKQIFQLVPEKHRAWHAGVSAWQGRIHLNDTSIGIEIVNLGYQEEGEKR 106 Query: 122 -TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + D Q + + + + +I+ Y + GH DI+P+RK DPGP F W + Sbjct: 107 RWFPFLDYQIELIIELAKDIIERYQLHPTCVVGHSDISPERKADPGPLFPWKKL 160 >UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Tax=Enterobacteriaceae RepID=AMID_ECOLI Length = 276 Score = 163 bits (412), Expect = 4e-39, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 75/177 (42%), Gaps = 40/177 (22%) Query: 20 DCRPDDET----PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 D R + +LV+H + D + A + +VS+H Sbjct: 32 DTRRQAQAAYPRIKVLVIHYTA-----------DDFDS---------SLATLTDKQVSSH 71 Query: 76 CLI-----RRDG--EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----- 123 L+ R +G I Q VP + AWHAG+S ++G R ND SIGIELE Sbjct: 72 YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131 Query: 124 ----AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + AQ Q L + + +I Y +N+ H DIAP RK DPGP F W + Sbjct: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQ 188 >UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=28 Tax=Enterobacteriaceae RepID=A7FHD3_YERP3 Length = 283 Score = 163 bits (412), Expect = 4e-39, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 80/189 (42%), Gaps = 41/189 (21%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 L+++G PS + R LV+H ++ E Sbjct: 27 LIDRGAYQIDTHYPSVAKNER-----VRFLVLHYTAVDDAE------------------- 62 Query: 62 PFFAEIAHLRVSAHCLI----RRDG---EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIG 114 + VSAH LI ++ G +Q VP +RAWHAGVS +QGR ND SIG Sbjct: 63 -SLRLLTQGEVSAHYLIPTHPKKAGGKAIALQLVPEAQRAWHAGVSSWQGRNNLNDTSIG 121 Query: 115 IELEGTD---------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 IE+ Y ++Q + + +T+ ++ Y ++ H DIAP RK+DP Sbjct: 122 IEIVNLGFTEKMLGRTWYPYNESQIELIEQLTKDIVQRYNISPSDVVAHSDIAPLRKSDP 181 Query: 166 GPAFDWARF 174 GP F W R Sbjct: 182 GPLFPWKRL 190 >UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacteria RepID=D2AU78_STRRD Length = 508 Score = 163 bits (412), Expect = 4e-39, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 82/185 (44%), Gaps = 35/185 (18%) Query: 8 LVGARRVP--SPHY--DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 GA+ V S +Y RP +V+H + GTI Sbjct: 214 YPGAKWVAASSSNYTVSNRPTSNAIDRIVIHVT------------QGSYAGTISW----- 256 Query: 64 FAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--T 120 + +VSAH ++R DG++ Q V RAWHA N S+GIE EG Sbjct: 257 -FQNPAAQVSAHYVVRSSDGDVTQMVREKDRAWHA--------RDWNSRSVGIEHEGYVN 307 Query: 121 DTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 D +TDA Y+ AA+TR + D Y P ++ GH ++ + TDPGP +DW R+ V Sbjct: 308 DASWFTDAMYRSSAALTRNIADRYGIPKDRAHIVGHVEVPGNDHTDPGPNWDWTRYMQYV 367 Query: 179 SKETT 183 + TT Sbjct: 368 NGTTT 372 >UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PRR2_CHIPD Length = 275 Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats. Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 21/157 (13%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +++ R P +++H+ + G+ D + F + +VSAH + Sbjct: 65 NFNLR----KPNYVIIHHTA---------------QGSCDTTFNTF--TLPRTQVSAHYV 103 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVT 137 I +DG I + RAWHAG++++ N SIGIEL+ + Q L + Sbjct: 104 ICKDGTINHMLNDYLRAWHAGIAKWGNVTDMNSCSIGIELDNNGLTPFQPQQINSLLVLL 163 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 +L + A N GH DIAP RK DP F W + Sbjct: 164 DSLKHRFNIPAANFIGHGDIAPGRKVDPSAWFPWQQL 200 >UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protein n=59 Tax=Proteobacteria RepID=A1V4B3_BURMS Length = 314 Score = 162 bits (410), Expect = 5e-39, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 61/170 (35%), Gaps = 36/170 (21%) Query: 21 CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR 80 R D LV+H + P + VSAH ++ Sbjct: 54 ARSADSRIRFLVMHYTEIGEA--------------------PSLRVLTQENVSAHYVVPD 93 Query: 81 DGE-------IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---------TLA 124 + Q VP +RAWHAGVS +QG N SIGIE Sbjct: 94 APRTERGAPVVYQLVPESERAWHAGVSAWQGATELNGVSIGIENVNRGPIDTPHGRMWAP 153 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 Y AQ + + + ++ Y + GH DIAP RK DPGP F W Sbjct: 154 YPPAQVDAIVRLAKDIVARYRIPPTRVVGHSDIAPQRKIDPGPLFPWRAL 203 >UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESH1_AMOA5 Length = 322 Score = 161 bits (409), Expect = 7e-39, Method: Composition-based stats. Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 35/176 (19%) Query: 17 PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 HY R E LV+H P LFT ++I RVSAH Sbjct: 64 NHYGDR-GTEDIAYLVMHYT-----VCNFPATMRLFT-----------SDIPEGRVSAHY 106 Query: 77 LIRRD--------GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL----------E 118 ++ + G + Q VP +K AWHAG+S ++G + N SIG+E E Sbjct: 107 VVTEEERERDVQGGMVFQVVPEEKTAWHAGISYWRGEQGLNLRSIGVENVNKGFVGKESE 166 Query: 119 GTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + + Q + L +++ +++ Y +N+ GH DIAP RK DPG F W + Sbjct: 167 YPNWFTFDKKQIRSLGTLSQYIVNSYNIAPQNVVGHADIAPTRKQDPGILFPWEKL 222 >UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Fusobacteriaceae RepID=C7NA60_LEPBD Length = 316 Score = 161 bits (409), Expect = 8e-39, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 27/168 (16%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 Y + + +++H ++ + VS+H L+ Sbjct: 82 YTSKGQNYRQRFIILHYTAVN--------------------RDGSLRALTGNDVSSHYLV 121 Query: 79 R--RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT-----LAYTDAQYQ 131 ++ + V +KRAWHAG S+++ + ND SIGIE+ + D Q + Sbjct: 122 SDQKNDPVFYLVDENKRAWHAGASEWKTTKNLNDSSIGIEIVNNGDVSGRFEPFKDFQIK 181 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 ++A + R LID Y N+ GH DIAP RK DPGP F W + Sbjct: 182 EVAVLVRHLIDKYEIPPTNILGHSDIAPQRKPDPGPLFPWEELNKKYN 229 >UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QVR5_BRAHW Length = 342 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 75/196 (38%), Gaps = 57/196 (29%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 SP Y+ R +++H +L F + VSAH Sbjct: 43 SPAYNLR-----IKYIILHYTALND--------------------DLSFKVLTDPGVSAH 77 Query: 76 CLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------------ 121 LI R D I + V + RAWHAG++ + R ND SIGIE+ Sbjct: 78 YLITTREDEPIYKLVDDNDRAWHAGITMFDNRHSMNDTSIGIEIVNLGFLQKVTNTYEDL 137 Query: 122 ------------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKT 163 + + D+Q ++A + + LI+ Y N+ GH DIAP RK Sbjct: 138 RRMTKKQREELFFIPYDEYIEFEDSQIDKVAYLLKELIEKYGIKPYNILGHSDIAPYRKK 197 Query: 164 DPGPAFDWARFRVLVS 179 DPGP F W R + Sbjct: 198 DPGPKFPWKRLYDEYN 213 >UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacteria RepID=C6X3P6_FLAB3 Length = 342 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 32/158 (20%) Query: 29 TLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG--EIVQ 86 +++H +L + VS+H L+ G EI Q Sbjct: 106 KYIILHYTAL--------------------DDDKSVMVLTQQSVSSHYLVNNLGDREIYQ 145 Query: 87 YVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT----------LAYTDAQYQQLAAV 136 V +KR++HAG+S ++ ND SIGIE+ + + Q +++AA+ Sbjct: 146 LVDENKRSYHAGISTWRNDSMLNDTSIGIEIVNAGYVTDSTGVKIFPGFDEGQVKKVAAL 205 Query: 137 TRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + + Y N+ H DIAP RK DPGP F W + Sbjct: 206 VKDIAGRYMIPPTNILAHSDIAPTRKQDPGPKFPWKKL 243 >UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5 Tax=Bacteria RepID=A5WCW3_PSYWF Length = 308 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 69/182 (37%), Gaps = 43/182 (23%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 S Y + + +V+H + E + VSAH Sbjct: 55 SQSYQAQGKSQRIKYIVLHYTAENEPE--------------------SLRILTTANVSAH 94 Query: 76 CLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------------ 121 LI D I Q VP ++RAWHAG + GR ND SIGIE+ Sbjct: 95 YLIPITDDKPIYQLVPDNQRAWHAGQGSFAGRSILNDTSIGIEIVNEGIQQQFRKAKNTD 154 Query: 122 ---------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWA 172 + +TD Q +++A + + L Y + GH D+AP RK DPG F W Sbjct: 155 NDGYHPAEHYVEFTDIQIKKIAQLVQDLAQKYEIEPTLIIGHSDMAPSRKIDPGAKFPWE 214 Query: 173 RF 174 R Sbjct: 215 RL 216 >UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protein n=8 Tax=Proteobacteria RepID=Q3JK19_BURP1 Length = 454 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 72/183 (39%), Gaps = 43/183 (23%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 R + SP+ D R LV+H + + + Sbjct: 173 RSIQSPNQDSR-----VRTLVLHYTAQTLADSIASL------------------TSPQRQ 209 Query: 72 VSAHCLI---RRDGE---IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---- 121 VSAH L+ DG + + VP +RAWHAGVS +QG N S+GIE+ Sbjct: 210 VSAHYLVPDAADDGRRFKVFELVPQARRAWHAGVSYWQGDRMLNAGSVGIEIVNLGFPPE 269 Query: 122 ----------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW 171 Y DAQ A+ ++ + + + GH D+AP RKTDPGP F W Sbjct: 270 DENLPLMNRRWYPYPDAQVAVFGALAADVVAQHQVLPHKVVGHSDVAPGRKTDPGPLFPW 329 Query: 172 ARF 174 + Sbjct: 330 KKL 332 >UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QX12_CHRSD Length = 303 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 63/147 (42%), Gaps = 10/147 (6%) Query: 40 PGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG-EIVQYVPFDKRAWHAG 98 + L D A + + VSAH ++ R+ +I Q V +RAWHAG Sbjct: 56 TAPGQSSRVRHLVLHYTDSDARRSLSTLTGPHVSAHYVLTREAPKIYQLVDESRRAWHAG 115 Query: 99 VSQYQGRERCNDFSIGIELEGTD---------TLAYTDAQYQQLAAVTRALIDCYPDIAK 149 S + R ND SIGIE+ Y AQ L A+ R ++ + Sbjct: 116 ASAWHSRTNLNDTSIGIEVVNRGPYQTPAGRAWTPYPSAQIDTLIALARDIVARHAIDPV 175 Query: 150 NMTGHCDIAPDRKTDPGPAFDWARFRV 176 ++ GH DIAP RK DPGP F W R Sbjct: 176 DVVGHADIAPRRKIDPGPRFPWYRLYR 202 >UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=beta proteobacterium KB13 RepID=B6BVD5_9PROT Length = 134 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 53/105 (50%), Positives = 70/105 (66%) Query: 38 LPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHA 97 +PPG + +I+ F +D AHP+F EI L+VSAH LI+R+GE++Q+V + RAWHA Sbjct: 1 MPPGIYNNNYIEDFFQNQLDIDAHPYFKEIKDLKVSAHFLIKRNGELIQFVSCNDRAWHA 60 Query: 98 GVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALID 142 G S YQG+E CNDFSIGIELEG D + D QY +L + L Sbjct: 61 GESSYQGKENCNDFSIGIELEGDDETPFEDDQYIKLIELLGCLKK 105 >UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Providencia RepID=D1P770_9ENTR Length = 295 Score = 156 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 76/191 (39%), Gaps = 43/191 (22%) Query: 7 WLVGARRVPS-------PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQ 59 LVG PS + R E +V+H + Sbjct: 12 LLVGCSTTPSKTGYFLDQSHPSRNTSERIQYIVLHYT-------------------VSDD 52 Query: 60 AHPFFAEIAHLRVSAHCLIR-----RDGE--IVQYVPFDKRAWHAGVSQYQGRERCNDFS 112 AH + +VS+H LI ++G+ I+Q VP +AWHAG S++Q ND S Sbjct: 53 AH-SIKILTKGKVSSHYLIPSQPEQKNGQPVILQLVPERLKAWHAGDSRWQYHHSLNDNS 111 Query: 113 IGIELEGTD---------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKT 163 IGIE+ + D+Q L + ++ Y +N+ GH DIAP RK Sbjct: 112 IGIEIVNEGLVRKNGQDIWQPFNDSQIDALIPLLSDIMQRYGIPPENVIGHSDIAPLRKQ 171 Query: 164 DPGPAFDWARF 174 DPG AF W Sbjct: 172 DPGRAFPWQAL 182 >UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-like protein n=4 Tax=Actinomycetales RepID=D2AQX4_STRRD Length = 467 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 78/186 (41%), Gaps = 35/186 (18%) Query: 4 EQGWLVGARRVPSPHY--DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 GW+ + S +Y RP +V+H + GTI Sbjct: 215 NAGWVAAS----SANYTASSRPSAYAIDRIVIHVT------------QGSYAGTISW--- 255 Query: 62 PFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 + VSAH ++R DG + Q V AWHAG Y N S+GIE EG Sbjct: 256 ---FQNPSASVSAHYVVRSSDGAVTQMVRDKDVAWHAGNWSY------NTRSVGIEHEGY 306 Query: 121 --DTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 D +TDA Y+ AA+TR + D Y P ++ GH + TDPGP +DW R+ Sbjct: 307 VSDASWFTDAMYRSSAALTRHIADRYGIPKDRAHIIGHNQVPGATHTDPGPYWDWNRYMQ 366 Query: 177 LVSKET 182 V+ + Sbjct: 367 YVTGGS 372 >UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphingobacterium spiritivorum RepID=C2G1S0_9SPHI Length = 297 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 71/171 (41%), Gaps = 21/171 (12%) Query: 4 EQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 ++G V + H+D R P +++H+ + L T Sbjct: 76 QKGMRKDLDWVGAIHFDIR----KPNYVIIHHTA------QDSLKQTLRT---------- 115 Query: 64 FAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 + H +VSAH LI + GE+ Q + R WHAG S++ N S+GIEL+ Sbjct: 116 -FTLEHTKVSAHYLIGKKGEVYQLLNDYLRGWHAGASKWGSVTDMNSVSLGIELDNNGRE 174 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 ++D Q L + L Y N GH DIAP RK DP F W + Sbjct: 175 PFSDVQINALLTLLDTLKTNYDIPTANFIGHGDIAPTRKNDPSIFFPWKKL 225 >UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-like protein n=2 Tax=Streptosporangium roseum DSM 43021 RepID=D2BEW5_STRRD Length = 480 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 35/180 (19%) Query: 8 LVGARRVP--SPHY--DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 A P S +Y RP + +V+H + GTI Sbjct: 211 YPSAHWAPANSGNYAVSSRPSGDVIDRIVIHVT------------QGSYAGTISW----- 253 Query: 64 FAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT-- 120 + +VSAH ++R DG++ Q V RA+HAG N S+GIE EG Sbjct: 254 -FQNPAAQVSAHYVVRSSDGDVTQMVREKNRAFHAG--------SFNRRSVGIEHEGYVD 304 Query: 121 DTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 + +TDA Y+ AA+TR + D Y P ++ GH + TDPGP ++W ++ V Sbjct: 305 NASWFTDAMYRSSAALTRNIADRYGIPKDRAHIVGHHQVPGTDHTDPGPNWNWTKYMQFV 364 >UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protein n=19 Tax=Proteobacteria RepID=A4VRS8_PSEU5 Length = 262 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 63/161 (39%), Gaps = 31/161 (19%) Query: 25 DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR-DGE 83 D +V+H S ++ VS+H LI Sbjct: 32 DSRVQFIVLHYTST--------------------DLPRSLELLSGRDVSSHYLIGESPAT 71 Query: 84 IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD----------TLAYTDAQYQQL 133 I + V D+RAWHAG S++ GR N SIGIEL Y+ AQ L Sbjct: 72 IYRLVDEDRRAWHAGESEWNGRTWLNATSIGIELVNQGYEQSADGRRLWYPYSQAQIDAL 131 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + + ++ + + GH DIAP RK DPGP F W R Sbjct: 132 VVLLKDIMARHGLKPGAIIGHSDIAPQRKVDPGPLFPWKRL 172 >UniRef50_C1QGN2 Negative regulator of beta-lactamase expression n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QGN2_9SPIR Length = 344 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 74/196 (37%), Gaps = 57/196 (29%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 SP Y+ R +++H +L + VSAH Sbjct: 43 SPAYNLR-----IKYIILHYTAL--------------------DDDLSLKVLTDPGVSAH 77 Query: 76 CLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------------ 121 LI R + I + V + RAWHAGV+ + R ND SIGIE+ Sbjct: 78 YLITTRENDPIYKLVDDNNRAWHAGVTMFDNRLTMNDTSIGIEIVNLGFLEKVTNTQEQL 137 Query: 122 ------------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKT 163 L Y ++Q Q++ + R LID Y N+ GH DIAP RK Sbjct: 138 RRMTKRERENLFFIPYDEYLEYNESQIQKVVYLLRNLIDKYGVKPYNILGHSDIAPYRKK 197 Query: 164 DPGPAFDWARFRVLVS 179 DPGP F W R + Sbjct: 198 DPGPKFPWKRLHDEYN 213 >UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aeromonas RepID=A4SRC8_AERS4 Length = 273 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 72/181 (39%), Gaps = 42/181 (23%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 R PS + R L++H D + E AH +V Sbjct: 27 RYPSASQNER-----IAFLILHYTD-----------------EDDAHSLRLLTEPAH-QV 63 Query: 73 SAHCLIRRDGE-----IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------ 121 SAH LI RD + + Q VP +RAWHAG S++ N SIGIE+ Sbjct: 64 SAHYLIPRDTDQTPLPVYQLVPDSQRAWHAGRSRWHQYAGLNASSIGIEIVNLGYPPEDA 123 Query: 122 --------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR 173 YT AQ + A+T+ L+ Y + H D+AP+RK DPGP F W Sbjct: 124 LLPAHQRRWQPYTQAQIAAIGALTQKLVQRYRIPPTQVLAHSDVAPERKQDPGPHFPWRE 183 Query: 174 F 174 Sbjct: 184 L 184 >UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protein n=62 Tax=Proteobacteria RepID=A1UW52_BURMS Length = 341 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 67/183 (36%), Gaps = 43/183 (23%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 + SP+ D R LV+H + AL T P VS Sbjct: 63 IASPNQDSR-----VRTLVLHYTAQTLARS-----VALLTDPARP-------------VS 99 Query: 74 AHCLIRRDG------EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------ 121 AH L+ + VP RAWHAGVS +QG N SIG+E+ T Sbjct: 100 AHYLVPDAADAGTLFRVYALVPETNRAWHAGVSYWQGERLLNASSIGVEIVNTGFPDADE 159 Query: 122 --------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR 173 + DAQ + + + + + + GH DIAP RK DPGP F W Sbjct: 160 NAPLMRRRWAPFPDAQMAVVGRLAADIAARHEIPPQKVVGHSDIAPGRKLDPGPLFPWRM 219 Query: 174 FRV 176 Sbjct: 220 LHE 222 >UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A62BF Length = 214 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 60/170 (35%), Gaps = 36/170 (21%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 D LV+H + + VSAH ++ Sbjct: 40 GADARIRFLVMHYTESDEAQ--------------------SLRTLTGDAVSAHYVVPAQP 79 Query: 83 EI-------VQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---------TLAYT 126 I Q VP +RAWHAGVS +QG N SIGIE Y Sbjct: 80 RIEWGKPVVYQLVPEAQRAWHAGVSAWQGATELNAASIGIENVNGGPADTPQGRTWQPYP 139 Query: 127 DAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 Q L +++ ++ Y + GH DIAP RK DPGPAF W Sbjct: 140 PEQVDALIRLSQDIVARYAIPPTRVVGHSDIAPQRKIDPGPAFPWRALAQ 189 >UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN01_9RICK Length = 159 Score = 151 bits (383), Expect = 7e-36, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 18/160 (11%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 + PS ++D D +++H + D ++ + +V Sbjct: 7 QKPSENFDK-LKDRRIKYVIIHYTGMR-----------------DQKSAIKRLQSKVAKV 48 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H LI R G++ Q V AWHAG S++ N SIGIEL ++ + Q Sbjct: 49 SCHYLISRGGKVYQMVQDLDVAWHAGKSKWGKDINLNSKSIGIELVNKGFESFPNKQILA 108 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWA 172 L + + L Y + GH DI+P RKTDPGP F W Sbjct: 109 LIKILKILKKKYKIKPSYVLGHEDISPGRKTDPGPKFPWK 148 >UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Roseiflexus RepID=A5UR54_ROSS1 Length = 419 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 24/169 (14%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 + SP+Y R + + +++V+H + + + +P + RVS Sbjct: 9 IRSPNYGSR-NGRSISMIVIHATA--------GTVRSALAWLTNPAS----------RVS 49 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELE--GTDTLAYTDAQYQ 131 AH LI + G+I + VP + AWHAG + ++G ND S+GIELE Y Q + Sbjct: 50 AHYLIDKAGQIYRLVPDEYAAWHAGRAAWRGETAINDISLGIELENANNGRDPYPATQME 109 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWARFRVLV 178 L +TR + Y + H DIA RK+DP F W F V Sbjct: 110 SLVQLTRDKVAQYRIAPDMVVRHLDIAIPRGRKSDP-AGFPWNDFLRQV 157 >UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_9FUSO Length = 301 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 39/186 (20%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 +V S Y +E +++H + E+ RV Sbjct: 51 QVDSNSYVATGKNERVQFIILHYTAT--------------------DNLGSIKELTSSRV 90 Query: 73 SAHCLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELE------------ 118 S+H L+ D +I VP ++RAWHAG S ++GR ND S+GIE+ Sbjct: 91 SSHFLVLDEDDNKIYNLVPLEQRAWHAGASAFRGRTNINDTSVGIEIVSDGIAKEFIADP 150 Query: 119 -----GTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR 173 + Y Q ++ A + + + + Y A+N+ H DIAP RK DPG F W Sbjct: 151 NPYHPYDHYVDYKPIQIEKAAQIIKYVAEKYNIPARNILAHSDIAPSRKKDPGAKFPWKE 210 Query: 174 FRVLVS 179 + Sbjct: 211 LYDKYN 216 >UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Shewanella denitrificans OS217 RepID=Q12NJ5_SHEDO Length = 272 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 84/212 (39%), Gaps = 55/212 (25%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 ++E L SP+ P+ +V+H GG + I+PQA Sbjct: 1 MIEGHKLKDIPFYASPNVGE-VMIAPPSAVVIHYT-------GGSTLAGAVEWLINPQA- 51 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 + SAH +I G+IVQ VPF++ AWHAG S YQGR N FSIGIEL Sbjct: 52 ---------KASAHVVIGEAGDIVQLVPFNQVAWHAGKSHYQGRSNFNRFSIGIELVNPG 102 Query: 122 -----------------------------------TLAYTDAQYQQLAAVTRALIDCYPD 146 AYT AQ + + L + YP Sbjct: 103 QLTLVGQQHCAWFGDPYPQERVVKIPQKDSIQEAVWCAYTQAQIIAVKRLLLMLKEYYPI 162 Query: 147 IAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 + GH +I+P RK DPGPAF A R V Sbjct: 163 NL--LVGHDEISPGRKRDPGPAFPMAPLRRTV 192 >UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Chloroflexus RepID=B8GD95_CHLAD Length = 641 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 25/174 (14%) Query: 17 PHYDCRPDDETPTLLVVHNISLP-PGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 ++ + ++V+H + PG+F W+ VS H Sbjct: 12 NNFQP-GSPDRIRMIVLHATAGSYPGDFK--WLRQ--------------GGAPGREVSVH 54 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQY----QGRERCNDFSIGIELEG--TDTLAYTDAQ 129 I + G+I Q V AWHAGVS++ + CN+ S+GIELE Y Q Sbjct: 55 YYITKRGQIFQLVADHDIAWHAGVSRWEVDGRTVYGCNEVSLGIELENRNDGRDPYPPEQ 114 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 Y + R L+ Y + H DI+P RKTDP F W +F V + T Sbjct: 115 YAAALWLVRELVQKYHIPPNQVVRHLDISPGRKTDP-AGFPWQQFLDEVFADLT 167 >UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT21_THISH Length = 275 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 78/208 (37%), Gaps = 57/208 (27%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 SP C TP LLV+H + E W ++PQA Sbjct: 14 DPCEYRKSP---CHGGKMTPRLLVIHFTAGASAESSINWF-------LNPQA-------- 55 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--------- 119 + SAH +I R+G I Q VPFD AWHAG S++ N SIGIEL+ Sbjct: 56 --KASAHLVIDRNGHITQMVPFDTVAWHAGASRWNDLSGLNHHSIGIELDNAGRLQPHGD 113 Query: 120 --------------------------TDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTG 153 + YT Q + V + L Y +++ G Sbjct: 114 QWRSWFGRDYHDDEVLVARHKHETEPSGWQLYTREQIETTLEVAQCLFARYGL--EDIVG 171 Query: 154 HCDIAPDRKTDPGPAFDWARFRVLVSKE 181 H DIAP RK+DPGPAF R + Sbjct: 172 HEDIAPGRKSDPGPAFPMGALRARLLGR 199 >UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Myxococcales RepID=D0LQ75_HALO1 Length = 551 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 34/191 (17%) Query: 6 GWLVGARRVPSPHYDCRPDDE--TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 + PSP+Y+ RP P ++V+H G + W + T + Sbjct: 229 PDYADSVWRPSPNYNSRPSGSIGDPAMVVIHTC---EGSYSSCW--SWLTNSASG----- 278 Query: 64 FAEIAHLRVSAHCLIRRDG-EIVQYVPFDKRAWHAGVSQ----------YQGRERCNDFS 112 VSAH ++ G +I Q V +RAWH G S ++ N F+ Sbjct: 279 --------VSAHYVVNESGSQISQLVRESQRAWHIGASYQCSNNSSVDCWRNGYSSNHFT 330 Query: 113 IGIELEGTDTLA-YTDAQYQQLAAVTRALI--DCYPDIAKNMTGHCDIAPDRKTDPGPAF 169 IGIE G + + + Q A + + P ++ H + P +TDPGP + Sbjct: 331 IGIEHGGFASQSSFPSGQIDASARLVCDITRDQGIPRDRYHIVSHGQLQPYNRTDPGPNW 390 Query: 170 DWARFRVLVSK 180 W + ++ Sbjct: 391 PWTTYLNKINS 401 >UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orientia tsutsugamushi RepID=A5CBZ0_ORITB Length = 366 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 66/174 (37%), Gaps = 31/174 (17%) Query: 17 PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 HY R D + L++H + +VS+H Sbjct: 93 NHYTQRNQDTSIKYLIMHYT---------------VCNFSSTAQEFTVNKPLLGQVSSHI 137 Query: 77 LIRRD-------GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD-------- 121 +I G ++ +VP +K A+HAGVS +Q N SIGIE Sbjct: 138 VITEAEEGKTPAGILISFVPENKIAYHAGVSAWQNDTNLNSMSIGIEHVNRGFNTVNAKK 197 Query: 122 -TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + Y Q V+ +I Y ++ GH DIA +RK+DPGP F W + Sbjct: 198 EWVCYDKHQIATSGIVSSGIIRRYNIKPIHVLGHSDIAYNRKSDPGPLFPWGQL 251 >UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARF9_RUBXD Length = 496 Score = 145 bits (367), Expect = 6e-34, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 65/164 (39%), Gaps = 29/164 (17%) Query: 22 RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR- 80 R +V+H + + + +VSAH +R Sbjct: 216 RERSYDINRIVIHVT------------------QGSWSSAINWFKDGRAQVSAHYTVRSS 257 Query: 81 DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL--AYTDAQYQQLAAVTR 138 DG+I Q V AWHAG Y N SIGIE EG + +TDA Y+ A + Sbjct: 258 DGKIGQSVREADIAWHAGNWDY------NTHSIGIEHEGYVSQKRWFTDAMYRSSARLAA 311 Query: 139 ALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 L Y P K++ GH + TDPGP ++W R+ LV Sbjct: 312 YLCKKYRIPIDRKHIIGHNQVPGADHTDPGPYWNWDRYMRLVRS 355 >UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Streptomyces RepID=D1WWE1_9ACTO Length = 519 Score = 145 bits (366), Expect = 8e-34, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 72/184 (39%), Gaps = 34/184 (18%) Query: 5 QGWLVGARRVP--SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 AR V S ++ +V+H + G+I +P Sbjct: 212 SPDYPSARWVAAYSGNFVVGR-KAAVDKVVIHTT------------QGSYAGSISWYQNP 258 Query: 63 FFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT- 120 +VSAH IR DGE+ Q V AWHAG N S+GIE EG Sbjct: 259 ------ASKVSAHYTIRSSDGEVTQSVLEKDTAWHAG--------STNSSSVGIEHEGYV 304 Query: 121 -DTLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 + YT+A Y+ A +T+ L Y ++ GH + TDPGP +DW + L Sbjct: 305 DNPAWYTEAMYRSSAELTKHLAARYGIPKNRSHIIGHSEAPGADHTDPGPNWDWNHYMEL 364 Query: 178 VSKE 181 + E Sbjct: 365 IDGE 368 >UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Gammaproteobacteria RepID=Q15N79_PSEA6 Length = 818 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 74/193 (38%), Gaps = 55/193 (28%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PS ++ R LV+H ++ + +D +SA Sbjct: 33 PSKNFSHR-----VKFLVMHFTAIDYQKSVHALVD-------------------EGGLSA 68 Query: 75 HCLIRRDG---------EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT--- 122 H LI EI++ V DKRAWHAG S +QGR ND SIGIE+ Sbjct: 69 HYLIPESNDPSYPKDSLEILKLVDEDKRAWHAGNSVWQGRSELNDSSIGIEIVNVPECHF 128 Query: 123 ------------------LAYTDAQYQQLAAVTRALIDCYPDI-AKNMTGHCDIAPDRKT 163 Y Q + L A+++ ++ PDI + GH DIAP RK Sbjct: 129 DKEANTTSEHGENRLCVFPDYDPKQIELLIALSQQILARNPDISPTKVVGHSDIAPSRKN 188 Query: 164 DPGPAFDWARFRV 176 DPGP F W Sbjct: 189 DPGPRFPWFELYQ 201 >UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SAT8_9ACTO Length = 516 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 73/180 (40%), Gaps = 33/180 (18%) Query: 8 LVGARRVP--SPHY--DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 A VP S +Y R +V+H + + G+I Sbjct: 216 YGPAAWVPANSSNYTVSSRESAYPINYIVIHT------------MQGSYAGSISW----- 258 Query: 64 FAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT-- 120 + A SAH L+R DG + Q V AWHAG Y N SIGIE EG Sbjct: 259 -FQNAAAGTSAHYLLRSSDGAVTQMVRDKDIAWHAGNWTY------NTQSIGIEHEGYVD 311 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 YTDA Y+ AA+TR L D Y N+ GH + TDPGP ++W + LV Sbjct: 312 SASWYTDAMYRSSAALTRFLCDKYGIPKTRNNIIGHNQVPGATHTDPGPNWNWTYYMQLV 371 >UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax=Proteobacteria RepID=A6UZQ6_PSEA7 Length = 291 Score = 143 bits (360), Expect = 4e-33, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 69/178 (38%), Gaps = 21/178 (11%) Query: 20 DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI- 78 D + P L + S + L + SAH L+ Sbjct: 28 DAHGETLAPPPLAIDYNSYRTSAAYNKRVRYLVLHYTALDFSRSVEMLTRGPGSAHYLVP 87 Query: 79 -------RRDG----EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT----- 122 RR G I V + RAWHAGVS + GRE ND SIGIE+ Sbjct: 88 SPADASYRRAGFSGQRIFNLVDENDRAWHAGVSSWGGREGLNDSSIGIEIVNLARDDDGV 147 Query: 123 ---LAYTDAQYQQLAAVTRALIDCYPDI-AKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 Y +Q + L + R ++ YPDI K++ GH DIA RK+DPGP W Sbjct: 148 FTFPDYEPSQIEALRQLARNILQRYPDISPKHVLGHSDIAVGRKSDPGPKLPWKELHD 205 >UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2 Tax=Alteromonas macleodii RepID=B4RX52_ALTMD Length = 315 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 79/211 (37%), Gaps = 55/211 (26%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 + SP+ P +V+H + +D + A Sbjct: 22 ENVKFTASPNTSGAFQTGAPDTIVIHFTAGSS---------------LDSSVNVL--TNA 64 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------- 121 VSAH + R+G+IVQ +P +K WHAG S Y+GR N +SIGIEL+ Sbjct: 65 ESGVSAHFALGRNGDIVQMLPTNKIGWHAGKSHYKGRSGLNRYSIGIELDNAGQLKPRGD 124 Query: 122 -----------------------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMT 152 YTD Q ++ + L + YP + Sbjct: 125 GTYESWFGNVYRESEVIAAQHPNQSVLGYWHKYTDIQIASTISLCKVLCEHYPISV--VV 182 Query: 153 GHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 GH +IAP RK DPGPAF + R V E + Sbjct: 183 GHDEIAPSRKVDPGPAFPMHQIREQVLLEIS 213 >UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9N2Y5_9ACTO Length = 443 Score = 142 bits (358), Expect = 7e-33, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 18 HYDC--RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 +YD RPD +V+H+ +D + + SAH Sbjct: 65 NYDTANRPDSNAVKFIVLHDTE------------------VDYDTTLKIFQNPANQTSAH 106 Query: 76 CLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT---DTLAYTDAQYQ 131 ++R DG + Q V AW AG N SIGIE EG YT Y+ Sbjct: 107 YVVRSADGHVTQMVKNKDVAWQAGNWY------LNTHSIGIEQEGVAAEGATWYTSEMYR 160 Query: 132 QLAAVTRALIDCY--PDIAKNMTGHCDIAPDR-------KTDPGPAFDWARFRVLVSKET 182 A + R L Y P +++ GH + P DPGP +DW RF L+ T Sbjct: 161 STARLVRYLAAKYDIPLDRQHILGHDGVPPTSAAGTKNMHWDPGPYWDWNRFMALLGAPT 220 >UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces sp. ACTE RepID=D1XLT9_9ACTO Length = 444 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 69/181 (38%), Gaps = 39/181 (21%) Query: 18 HYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 +YD RP +V+H+ +D + + SAH Sbjct: 66 NYDTADRPRSNAVEFIVLHDTE------------------VDYDTTLKIFQDPANKTSAH 107 Query: 76 CLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT---DTLAYTDAQYQ 131 ++R DG + Q V AW AG N SIGIE EG YTDA Y+ Sbjct: 108 YVVRSADGHVTQMVKNKDVAWQAGNWY------LNTHSIGIEQEGVAAEGAKWYTDAMYR 161 Query: 132 QLAAVTRALIDCY--PDIAKNMTGHCDIAPDR-------KTDPGPAFDWARFRVLVSKET 182 A + R L Y P +++ GH + P DPGP +DW RF L+ + T Sbjct: 162 STARLVRHLAAVYDIPLDRQHILGHDGVPPTSAAGTQNMHWDPGPYWDWNRFMALLGRPT 221 Query: 183 T 183 Sbjct: 222 V 222 >UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZI0_9ACTO Length = 455 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 32/181 (17%) Query: 8 LVGARRVPSPHYDCRPDDET-PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAE 66 GA P+ + R + +V+H +TGTI +P Sbjct: 217 YPGAIWNPASTSNYRVGRTAAISTIVIHVT------------QGSYTGTISWFKNP---- 260 Query: 67 IAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTL 123 +VSAH +IR DG++ Q V AWHA N +++GIE EG Sbjct: 261 --ASQVSAHYVIRSSDGQVTQMVAEKDTAWHA--------RSTNPYTVGIEHEGWVDQPS 310 Query: 124 AYTDAQYQQLAAVTRALIDC--YPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 +TDA Y+ AA+TR++ D P ++ GH ++ + TDPGP ++W + LV+ Sbjct: 311 WFTDAMYRSSAALTRSIADRRGIPKDRAHIRGHNELPDNDHTDPGPNWNWTYYMQLVNGG 370 Query: 182 T 182 T Sbjct: 371 T 371 >UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoarcus sp. BH72 RepID=A1K6E1_AZOSB Length = 286 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 76/208 (36%), Gaps = 60/208 (28%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 SP+++ P +V H + + + F + RVSA Sbjct: 24 ASPNHN---GIINPKFVVFHYTACSHAD----------------ASAAFMNASGNRRVSA 64 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------------- 121 H L+ DG I Q+V F+ RAWHAGVS+++ N SIG+E+ Sbjct: 65 HLLVDSDGSITQFVDFNLRAWHAGVSEWEDYRDLNSHSIGVEIVNYGYLLKNSAGGFTLS 124 Query: 122 --------------------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHC 155 A+T Q + A+ L D Y ++ GH Sbjct: 125 NGRSSPFTPAEVVEARHRKEAVRHQYWHAFTPEQLETCEALVEVLFDAYAL--SDVLGHD 182 Query: 156 DIAPDRKTDPGPAFDWARFRVLVSKETT 183 DIAP RK DPGPAF R + + Sbjct: 183 DIAPTRKVDPGPAFPMDRIKSRAVGRDS 210 >UniRef50_C4DNA4 Negative regulator of beta-lactamase expression n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNA4_9ACTO Length = 330 Score = 138 bits (348), Expect = 9e-32, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 64/169 (37%), Gaps = 30/169 (17%) Query: 21 CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR 80 RP + +V+H + A F V+ H L+ Sbjct: 55 SRPKSDPINKVVIH-----TMQGTASGTKAWFRN-------------PKSEVTTHYLVSS 96 Query: 81 D-GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT---DTLAYTDAQYQQLAAV 136 G + Q V AWHAG Y N SIGIE EG YT Y+ A + Sbjct: 97 SKGSVTQMVHESDIAWHAGNWDY------NKTSIGIEHEGYVQDPKKWYTTNMYESSARL 150 Query: 137 TRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 R++ D Y P K++ H ++ TDPG ++W R+ LV + T Sbjct: 151 VRSICDRYNIPMDRKHIIAHSEVPGATHTDPGKGWNWDRYMDLVRESKT 199 >UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO Length = 200 Score = 138 bits (348), Expect = 9e-32, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 33/179 (18%) Query: 10 GARRVP--SPHYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 GA VP + +Y RP +V+H FT T+ Sbjct: 44 GAEWVPASTANYTVAKRPSQYPVEYVVIHVT------------QEYFTDTL------AIF 85 Query: 66 EIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 + +V+AH ++R DG + Q V AWHAG Y N SIGIE EG Sbjct: 86 QNPAKQVTAHYVVRSADGHLAQCVREKDVAWHAGNWDY------NTRSIGIEHEGWVDRP 139 Query: 125 --YTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 +TDA ++ AA+T ++ + Y P +++ GH ++ TDPG +DW ++ LV+ Sbjct: 140 EYFTDAMFEASAALTASVCERYGVPKDREHILGHVEVPGTDHTDPGALWDWTKYLRLVN 198 >UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGY2_THET1 Length = 638 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 72/178 (40%), Gaps = 41/178 (23%) Query: 18 HYD--CRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 +YD RP D +V+H+ G + AL T T + VSA Sbjct: 258 NYDLANRPADGLEIQYIVIHDTE-------GSYASALSTFT------------SQSYVSA 298 Query: 75 HCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT---DTLAYTDAQY 130 H LIR DG + Q VP AW AG N SIGIE EG YT+ Y Sbjct: 299 HYLIRSSDGLVTQLVPTKDVAWQAGNWY------VNIHSIGIEHEGFAVEGATWYTEQMY 352 Query: 131 QQLAAVTRALIDCY--PDIAKNMTGHCDIAP------DR-KTDPGPAFDWARFRVLVS 179 + A + R L + P ++ GH D+ R DPGP +DWA + L+ Sbjct: 353 RSSARLVRYLAARFHIPLDRAHILGHDDVPGPGPAYQGRMHWDPGPYWDWAHYMALLG 410 >UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDD4_9DELT Length = 574 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 32/185 (17%) Query: 10 GARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 GA SP+Y RP P ++++H+ G + G W + + QA Sbjct: 225 GAIWRGSPNYSNRPGGTNPEMVIIHSC---EGSYSGCW-----SWLSNSQAG-------- 268 Query: 70 LRVSAHCLIRRDG-EIVQYVPFDKRAWHAGVSQYQGRE----------RCNDFSIGIELE 118 VSAH +I G E+ Q V +K+AWH G S N+F+IGIE Sbjct: 269 --VSAHYVINNSGSEVSQLVRENKKAWHIGASYNCSLNNSTKCNKNGSSSNNFTIGIEHA 326 Query: 119 GTDTLA-YTDAQYQQLAAVTRALIDCYPDIAK--NMTGHCDIAPDRKTDPGPAFDWARFR 175 G A +++ A + + + ++ H + P + DPGP + WA + Sbjct: 327 GYANQASWSNGLITTSAELVCDITQAWGIPRDQYHIVAHGTLQPYNRIDPGPNWPWANYL 386 Query: 176 VLVSK 180 ++ Sbjct: 387 AQINA 391 >UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAP2_9GAMM Length = 303 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 71/197 (36%), Gaps = 61/197 (30%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 S +Y+ R LV+H G W D+L + VS+H Sbjct: 27 SENYNSR-----IRFLVMHYT-------TGDWQDSLQ-------------ALTKGEVSSH 61 Query: 76 CLIRRDGE---------IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD----- 121 LI G+ + + V RAWHAGVS +QGR ND SIGIEL Sbjct: 62 YLIPEQGDASYPKSHLAVYRLVDEQHRAWHAGVSHWQGRSNINDQSIGIELINRAACAHQ 121 Query: 122 ---------TLAYTD------------AQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAP 159 + A+ D Q Q L +++ ++ P + GH DI Sbjct: 122 PQVLTEIAPSAAFFDNQTFCQYPNFDLQQIQLLIELSKDILARNPDIDPTAVVGHSDIQL 181 Query: 160 DRKTDPGPAFDWARFRV 176 K DPGP F W Sbjct: 182 GNKQDPGPHFPWYTLYQ 198 >UniRef50_C4SAC3 Negative regulator of beta-lactamase expression n=4 Tax=Proteobacteria RepID=C4SAC3_YERMO Length = 209 Score = 135 bits (340), Expect = 7e-31, Method: Composition-based stats. Identities = 38/103 (36%), Positives = 47/103 (45%), Gaps = 9/103 (8%) Query: 81 DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT--------DTLAYTDAQYQQ 132 D I V + RAWHAGVS + R ND SIGIE+ D Y Q Sbjct: 16 DMRIFNLVDENARAWHAGVSSWAERTNLNDTSIGIEIVNLASDKEGVWDFPPYPIEQIAA 75 Query: 133 LAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + + ++ YP N+ H DIAP RK+DPGP F W Sbjct: 76 VKQLAANILQRYPDITPVNVVAHSDIAPTRKSDPGPMFPWQEL 118 >UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ES14_OCEIH Length = 234 Score = 134 bits (339), Expect = 9e-31, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 77/192 (40%), Gaps = 42/192 (21%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDP-QAHPFFAEIAHLR 71 +P + + R D T +++H F I+ DP Q + Sbjct: 53 YLPEENSEPR--DSLVTHVMLH--------FSSNVIEKPE----DPFQVEDIYKVFHDYG 98 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG----RERCNDFSIGIELEGTDTL---- 123 VS H +I R GEI ++V D+ A+HAG + +G N +SIGIEL T Sbjct: 99 VSTHYVIDRTGEIYRFVSEDRNAYHAGEGKIEGVPKYENNMNRYSIGIELLAIGTKEEMM 158 Query: 124 ----------------AYTDAQYQQLAAVTRALIDCYPDI---AKNMTGHCDIAPDRKTD 164 YTD QY L + + + + ++ GH + AP+RKTD Sbjct: 159 PMMSPELYDTISSKHIGYTDKQYDALQDLLIDISSRHHKLKLNRNHIIGHQEYAPERKTD 218 Query: 165 PGPAFDWARFRV 176 PG FDW R Sbjct: 219 PGALFDWERLMS 230 >UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SF77_TRIAD Length = 232 Score = 134 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 17/124 (13%) Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD--------- 121 +VS+H LI G+I Q VP + +AWHAG S + G+ N +SIGIE+ Sbjct: 15 KVSSHFLISEKGDIHQLVPLEFKAWHAGESFWSGKNDINQYSIGIEIVNKGMKLKFLNNK 74 Query: 122 -----TLAYTDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPD--RKTDPGPAFDWAR 173 +++ Y LA + L YP I KN+ GH DI RK DPG AFDW Sbjct: 75 VQVLNINTFSNNIYFALAKLICELKKMYPKIQDKNIIGHSDITAKNLRKIDPGIAFDWKF 134 Query: 174 FRVL 177 +L Sbjct: 135 LNIL 138 >UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXY2_CHLT3 Length = 288 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 55/216 (25%), Positives = 76/216 (35%), Gaps = 57/216 (26%) Query: 1 MLLEQGWLVG---ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTID 57 + + L G +P++ +V+H + Sbjct: 3 LTISNHLLQGEAVCHDYSTPNHSGTFSAGKADTIVIHYTAGRDARSS-------VQTLCS 55 Query: 58 PQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117 P L+ SAH +I R+GEI Q PFD+ WHAG S + R N FSIGIE+ Sbjct: 56 PD----------LKASAHLVIGRNGEIYQLAPFDRITWHAGKSNWHERSGLNQFSIGIEI 105 Query: 118 EGTD-----------------------------------TLAYTDAQYQQLAAVTRALID 142 + YT+AQ + + R L Sbjct: 106 DNAGRLTKQGTEYLSWFGKSYAANEVFSGVHRHEQTLSFWHRYTEAQILLVEEICRLLRQ 165 Query: 143 CYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 Y K + GH +I+P RKTDPGPAF R V Sbjct: 166 VYDI--KEILGHEEISPGRKTDPGPAFPLDVLRNHV 199 >UniRef50_B1TGB7 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Burkholderia ambifaria RepID=B1TGB7_9BURK Length = 1030 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 74/192 (38%), Gaps = 46/192 (23%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 R SP++D +T +++H +P + + FT A + Sbjct: 232 RTAASPNFDEGRGSKTIDRIIIHIADVPTIQ----HVVNTFTN-------------AASK 274 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL-------------- 117 VS+H L+ + GE+VQ+V AWH S N SIGIE Sbjct: 275 VSSHYLVGQAGEVVQFVSEADTAWHCKGS--------NQRSIGIEHIAVKRGGADYPRRN 326 Query: 118 ---EGTDTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGH--CDIAPDRKTDPGPAFD 170 + D LA T QY+ AA+ +L D Y P + GH D + P +D Sbjct: 327 GTVQHFDALAPTQLQYETSAALVASLCDKYQLPINRTTIMGHREADTSTGHTACPDGNWD 386 Query: 171 WARFRVLVSKET 182 W F LV+ T Sbjct: 387 WDYFMRLVNSRT 398 >UniRef50_D2Q0D6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q0D6_9ACTO Length = 638 Score = 132 bits (333), Expect = 5e-30, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 76/199 (38%), Gaps = 50/199 (25%) Query: 9 VGARRVPSP----------HYDC--RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTI 56 + +PSP ++D RP+ ++VH+ + GT+ Sbjct: 239 LACEWLPSPYQDLGNGDYGNHDKANRPETGKINYIIVHDTETS------------WQGTL 286 Query: 57 DPQAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGI 115 P + VS +R DG+I Q+V AWHAG N SIGI Sbjct: 287 RLVQDPTY-------VSWQYTMRSSDGQIWQHVKAKDVAWHAGNWY------MNMHSIGI 333 Query: 116 ELEGT---DTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAP-------DRKT 163 E EG YT+A Y+ A + R L + + P ++ GH +I Sbjct: 334 EHEGYAAQGATWYTEALYRNSARLVRYLAEKHDIPLDRAHIIGHDEIPGTLPTTVAGMHW 393 Query: 164 DPGPAFDWARFRVLVSKET 182 DPGP +DW R+ L+ Sbjct: 394 DPGPYWDWERYFELLEAPI 412 >UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=19 Tax=Streptomyces RepID=D1X7T3_9ACTO Length = 249 Score = 132 bits (332), Expect = 6e-30, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 28/167 (16%) Query: 21 CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR 80 RPDD +++H A F + AH + + H ++ + Sbjct: 94 DRPDDFPVDRVIIHVTQGSFA-----------------SAVKVFQDPAH-QAATHYIVGQ 135 Query: 81 DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA--YTDAQYQQLAAVTR 138 DG +VQ + A+ AG Y N+ ++GIE EG T A Y A +T Sbjct: 136 DGRVVQMIRELDVAYQAGNRAY------NERAVGIEHEGFVDRPKDLTKAMYASSARLTA 189 Query: 139 ALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 ++ + P +++ GH ++ TDPGP +DW R+ LV + T Sbjct: 190 SICARHGIPVDREHIIGHVEVPGTDHTDPGPHWDWDRYMELVRRAAT 236 >UniRef50_A9AXU4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXU4_HERA2 Length = 748 Score = 132 bits (332), Expect = 7e-30, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 71/179 (39%), Gaps = 40/179 (22%) Query: 18 HYD--CRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 +YD RP D +++H+ + +T T++ + S Sbjct: 258 NYDLANRPADGLDFRYILIHDTEIT------------YTQTVN------VFQNPATGAST 299 Query: 75 HCLIR-RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTDAQY 130 H +IR DG I Q V WHAG N SIGIE EG Y++A Y Sbjct: 300 HYVIRASDGHIAQMVENKNVPWHAGNW------DVNGHSIGIEHEGIAIEGATWYSEAMY 353 Query: 131 QQLAAVTRALIDCY--PDIAKNMTGHCDIAP-------DRKTDPGPAFDWARFRVLVSK 180 Q A +TR L D Y P ++ GH ++ DPGP +DWA + LV Sbjct: 354 QASAQLTRYLADKYQIPLDRSHIIGHDELPGPLPQHQAGMHWDPGPFWDWAHYMDLVRG 412 >UniRef50_UPI0001B539A2 amidase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B539A2 Length = 638 Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 39/178 (21%) Query: 18 HYDC--RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 +YD RP D+ +V+H+ G W L + + H Sbjct: 266 NYDQADRPHDQKIDYIVIHDTE-------GTWDSVLKQAQ------------TPGQTAWH 306 Query: 76 CLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL--AYTDAQYQQ 132 +R DG++ Q+VP WHAG N+ S+GIE EG +T+A Y+Q Sbjct: 307 YTVRSSDGQVAQHVPTKDVGWHAGNWY------LNEKSLGIEHEGFAAQGTWFTEAMYRQ 360 Query: 133 LAAVTRALIDCY--PDIAKNMTGHCDIAPDR-------KTDPGPAFDWARFRVLVSKE 181 A + R L + P ++ GH ++ DPGP +DWA + L+ Sbjct: 361 SAKLVRYLAHRFGVPLDRAHILGHDNVPGPNADKIKSMHWDPGPYWDWAHYFDLLGAP 418 >UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Bacillus cereus 03BB108 RepID=B3ZYJ5_BACCE Length = 246 Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats. Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 42/188 (22%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPW-IDALFTGTIDPQAHPFFAEIAHLRV 72 +P + R E T +++H +S + P+ + + +D + Sbjct: 69 LPEKNSKVR--TEPITHVLIHFMSNAVAKPKDPYNVKDAYNSFLD------------NGL 114 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAG---VSQYQGRER-CNDFSIGIELEGTDTL----- 123 SAH LI R+G + Q V ++ A+HAG +S Y N++SIGIEL G T Sbjct: 115 SAHYLIDRNGVVYQLVNENRVAYHAGKGSISNYPEYTNKLNEYSIGIELLGIGTWKEMEI 174 Query: 124 ---------------AYTDAQYQQLAAVTRALIDCY---PDIAKNMTGHCDIAPDRKTDP 165 YTD QY+ L + + + +++ GH + A DRKTDP Sbjct: 175 MMSRDTYDLISPHNIGYTDVQYKSLKLLLEDIRKRNQNIQNDREHILGHDEYAKDRKTDP 234 Query: 166 GPAFDWAR 173 G FDW++ Sbjct: 235 GSLFDWSK 242 >UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Desulfitobacterium hafniense RepID=B8FYR6_DESHD Length = 242 Score = 128 bits (323), Expect = 8e-29, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 27/180 (15%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 V +P+Y ++ H + + G + +P + Sbjct: 4 EWVGTPNYRQGRSGNQVFAIINHITAGR------------YPGCLSWMQNP------ASQ 45 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAG-----VSQYQGRERCNDFSIGIELEGTDTLAYT 126 S+H L+ +DG I+Q V + AWHAG + + N ++IGIE E + T Sbjct: 46 ASSHYLVLKDGRILQLVKDEDTAWHAGLVNKPNWKLYNGKNPNLYTIGIEHEALEGEGLT 105 Query: 127 DAQYQQLAAVTRALIDCYPD---IAKNMTGHCDI-APDRKTDPGPAFDWARFRVLVSKET 182 DAQYQ + L+ +P + ++ GH + +R DPG F W + + + Sbjct: 106 DAQYQSTLWLHGQLLAKFPAIKPDSDHIIGHYRTDSVNRPNDPGAKFPWEQLFKDLKSKD 165 >UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC n=3 Tax=Lactobacillus RepID=C0WQZ5_LACBU Length = 604 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 70/178 (39%), Gaps = 40/178 (22%) Query: 18 HYD--CRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 +YD RP D +V+HN T D + F + ++ SA Sbjct: 232 NYDLANRPSDGLKINYIVIHNTET----------------TFDEATNLFASTPSYT--SA 273 Query: 75 HCLIRRD-GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT---DTLAYTDAQY 130 + +I + G + + V AWHAG N SIGIE EG YT+A Y Sbjct: 274 NYVISSEQGTVAEMVRPQNVAWHAGNWY------INSHSIGIEHEGYAAVGGYWYTEAMY 327 Query: 131 QQLAAVTRALIDCY--PDIAKNMTGHCDIAP-------DRKTDPGPAFDWARFRVLVS 179 Q AA+ + L Y P +++ GH ++ DPG ++W + L+ Sbjct: 328 QSSAALVKYLAAKYNIPLDRQHIIGHDNVPGLTPAAQKTMHWDPGTYWNWQHYFDLLG 385 >UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces RepID=Q9FC03_STRCO Length = 642 Score = 126 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 42/176 (23%), Positives = 65/176 (36%), Gaps = 37/176 (21%) Query: 21 CRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR 79 RP + +V+H++ A S H ++ Sbjct: 261 DRPTNGIRIDTIVIHDLEST------------------YDAGVAGLANPTNPASTHYVMS 302 Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTDAQYQQLAAV 136 G + Q VP A+HAG N SIGIE EG YT++QYQ A + Sbjct: 303 SSGAVTQMVPTKDIAFHAGN------YSTNLHSIGIEHEGFAAHGAAWYTESQYQATADL 356 Query: 137 TRALIDCY--PDIAKNMTGHCDIAP-------DRKTDPGPAFDWARFRVLVSKETT 183 + L + + P +++ GH ++A DPG A+DW F L+ + Sbjct: 357 VKYLAERFGVPLDRQHVIGHDNVAGPNSALVAGMHWDPGYAWDWNHFMSLLGAPVS 412 >UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=Clostridiales RepID=C9LCL1_RUMHA Length = 469 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 36/182 (19%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +++ +V+H + G + + SAH Sbjct: 11 NFNK-GSISRIKYIVIHYVGALGGAEDNC----------------RYYGGGNRNASAHYF 53 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL----EGTDTLA-------YT 126 + +GE+ Q V AWH G S Y+ E N SIGIE+ + T ++ + Sbjct: 54 VGFNGEVWQCVEDANIAWHCGASSYKHAECRNANSIGIEMCVRKKNTKSMGATDKDWYFE 113 Query: 127 DAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPA------FDWARFRVLVSK 180 DA + A +TR L++ Y A ++ H D+ K P P W F+ +S Sbjct: 114 DATVEAAAELTRYLMNKYGVPASHVIRHYDVTG--KICPNPYVYNTSAHTWDEFKRKISG 171 Query: 181 ET 182 + Sbjct: 172 QA 173 >UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY32_SYNWW Length = 222 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 28/174 (16%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 ++ P +V H + L G + +P RVS H L Sbjct: 16 NFSAGRRGRKPIAIVNHITA------------GLLPGALSWLQNP------ASRVSTHFL 57 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQ------YQGRERCNDFSIGIELEGTDTLAYTDAQYQ 131 I R G+I Q V + AW G+ Y G N +++ IE E + ++ QYQ Sbjct: 58 ISRQGQIFQLVKEEDTAWANGIVNQPNWVLYDG-SNPNFYTLSIEHEALAGDSLSEEQYQ 116 Query: 132 QLAAVTRALIDCYPD--IAKNMTGHCDI-APDRKTDPGPAFDWARFRVLVSKET 182 + R L+ + +++ GH I + +R PG F W R + E Sbjct: 117 ASLCLHRLLVSRFNIAVDEEHIIGHYRIDSINRSNCPGSRFPWKRLFSDLKGEK 170 >UniRef50_A6GHP2 Putative amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHP2_9DELT Length = 454 Score = 123 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 13/168 (7%) Query: 17 PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 P + + H+ + G + T + + VSAH Sbjct: 24 PDFGGAEYPLAISFNAAHSSNYTAGGMVSFDYITVHTVQGSYTGCQSWFQNPAANVSAHF 83 Query: 77 LIRRD-GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQL 133 ++R D GE+ Q V RAWH G S N ++IGIE EG + YT Y Sbjct: 84 VVRSDDGEVTQMVELADRAWHVGGS--------NAYAIGIEHEGWIDEPAWYTWEMYVSS 135 Query: 134 AAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 + +TR D P ++ GH ++ TDPG ++W + LV+ Sbjct: 136 SQLTRWTADELDIPKNRDHIVGHVELPNQSHTDPGIHWNWDLYMALVN 183 >UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9 Tax=Wolbachia RepID=C0R4G3_WOLWR Length = 525 Score = 121 bits (305), Expect = 8e-27, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 38/175 (21%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +Y R + +++VH+ + ++A +S H + Sbjct: 91 NYGDR-AGKKVLMVIVHHTETSTLKGTKDTLNA-------------------RGLSVHFI 130 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRER--------CNDFSIGIELEGTDTLAYTDAQ 129 + RDG I VP +K AWHAG+S + + N++S+GIE+ T + + Q Sbjct: 131 VDRDGNITLMVPLEKEAWHAGISYARVKVDSKLEELRKLNNYSVGIEIVNTGLEPFPEEQ 190 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIA-----PD-----RKTDPGPAFDWARF 174 + + + L++ + + H +I P+ RK DP FDW Sbjct: 191 MRSVKELILYLMERFKIKRDMIFSHSEIGTIVYDPELGYTMRKPDPHKLFDWELL 245 >UniRef50_C4DKK4 Negative regulator of beta-lactamase expression n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DKK4_9ACTO Length = 637 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 71/197 (36%), Gaps = 51/197 (25%) Query: 11 ARRVPSP------------HYDC--RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTI 56 +P+P ++D RP D LV+H+ +T T+ Sbjct: 249 CEWIPAPYEKYGEKPVDYGNHDQANRPKDMDIDYLVIHDTETS------------YTNTL 296 Query: 57 DPQAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGI 115 P + VS +R DG + Q+V + AW AG N S+G+ Sbjct: 297 RLVQDPTY-------VSWQYTLRSFDGHVAQHVKSEDVAWQAGNW------SVNAHSMGL 343 Query: 116 ELEGTDTL--AYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAP-------DRKTD 164 E EG +T+A Y+ A + + L + P ++ GH ++ D Sbjct: 344 EHEGVAAEGSWFTEAMYRSSAKLVKYLSKKFDIPLNRDHIIGHDNVPGTAPAKIAGMHWD 403 Query: 165 PGPAFDWARFRVLVSKE 181 GP +DW + L+ Sbjct: 404 TGPFWDWQHYFDLLGAP 420 >UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HCN0_STRPR Length = 895 Score = 119 bits (298), Expect = 6e-26, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 40/180 (22%) Query: 18 HY--DCRPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 +Y RP+ +V+H+ G + G A T P SA Sbjct: 264 NYTLGDRPNQGVDIRQIVIHDT---EGGYDGSL--AALTNPDVPG-------------SA 305 Query: 75 HCLIR-RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---TLAYTDAQY 130 H LIR DG + Q + AWHAG + N +IG+E EG YT+ QY Sbjct: 306 HYLIRASDGLVTQMIENKHLAWHAGNWTH------NMHAIGVEHEGYAIKEGKWYTEPQY 359 Query: 131 QQLAAVTRALIDCY--PDIAKNMTGHCDIA-------PDRKTDPGPAFDWARFRVLVSKE 181 Q A + + L Y P +++ GH ++A + D GP +DW + L+ Sbjct: 360 QSSADLVKFLATKYNVPLDREHIIGHDEVALQTDAGMANLHWDAGPYWDWNHYMGLMGAP 419 >UniRef50_A3TR75 Putative amidase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TR75_9MICO Length = 634 Score = 118 bits (297), Expect = 7e-26, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 30/174 (17%) Query: 18 HYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 +YD R D + LVVHN + T I +A P VS H Sbjct: 258 NYDLADREKDLSIDYLVVHNTECT---------YDVCTKLIKGEAEPNRF------VSWH 302 Query: 76 CLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---YTDAQYQ 131 +R DG + Q+V A HAG N S+G+E EG YT+A Y+ Sbjct: 303 YTVRSNDGHVDQHVATRNVAAHAGNWY------LNMHSVGVEHEGKAGEPGTWYTEALYR 356 Query: 132 QLAAVTRALIDCYPD--IAKNMTGHCD-IAPDRKTDPGPAFDWARFRVLVSKET 182 A + L ++ GH + ++ + K DPGP +DW + L+ Sbjct: 357 SSAELVTYLAAQKGIELDRAHIVGHEEFMSSNYKWDPGPYWDWEHYMALLGAPI 410 >UniRef50_A4WS28 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Rhodobacteraceae RepID=A4WS28_RHOS5 Length = 290 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 80/219 (36%), Gaps = 57/219 (26%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 M +E L G + + + P ++++H+ + + A Sbjct: 1 MRIENHRLSGVAFQQAKNIG---REIVPEIVILHDTA---------------SRITKGSA 42 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 + A + VS H ++ DG +VQ VP ++RA HAG S + GR CNDFSIGIE+ Sbjct: 43 ATYLASAPNG-VSVHFVVEIDGTVVQQVPTNRRAGHAGKSSFHGRTGCNDFSIGIEIVNP 101 Query: 121 D-------------------------------------TLAYTDAQYQQLAAVTRALIDC 143 + Y +AQ + + R+L D Sbjct: 102 GRMTRLSDAQCAAWYGETFATNLFGIREVETPQHGRGLWMPYPEAQMTAVLDLLRSLFDG 161 Query: 144 YPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKET 182 P + +T H ++P RK D P F R + Sbjct: 162 IPTLRD-ITTHWYVSPGRKVDTNPLFPLEHVRARILGRD 199 >UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793312 Length = 276 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 33/174 (18%) Query: 17 PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 H+ + + ++V+H + G + + + + VS+H Sbjct: 26 NHFYHKNVNNKIKIIVLHFTGID----FGATVKEFTSKRSNTSRN----------VSSHY 71 Query: 77 LIRRDGE------IVQYVPFDKRAWHAGVSQYQGRER----------CNDFSIGIELEGT 120 +I R E ++Q VP + ++HAG+S + N G Sbjct: 72 VIARPTEAGTHNQLLQVVPENYVSYHAGISLWGNYSSINSISIGIEIVNY---GYNATND 128 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + Q + + +++ Y + N+ GH DIAP+RK DPG F W++ Sbjct: 129 SWDPFYQDQISIVGLMVARMVNQYKVLPHNVVGHSDIAPNRKIDPGVMFPWSQL 182 >UniRef50_D2AX66 Negative regulator of beta-lactamase expression-like protein n=12 Tax=Actinomycetales RepID=D2AX66_STRRD Length = 646 Score = 114 bits (286), Expect = 2e-24, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 74/196 (37%), Gaps = 49/196 (25%) Query: 11 ARRVPSP----------HYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDP 58 +P+P ++D RP ++ +V+H ++ F ++D Sbjct: 255 CEWIPAPYQALPDDDYGNHDLSNRPWNQKIDYIVIH------------DMEGYFGPSVDL 302 Query: 59 QAHPFFAEIAHLRVSAHC-LIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117 +P S H L DG I Q++ W AG N SIG+E Sbjct: 303 VQNPARP------ASWHYSLRSSDGHIAQHLKTKDVGWQAGNWY------VNAKSIGLEH 350 Query: 118 EGT---DTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAP-------DRKTDP 165 EG YT+A Y+ A + R L + P ++ GH ++ DP Sbjct: 351 EGFLGEGAAWYTEAMYRTSAKLVRYLAMRHGVPLDRAHIIGHDNVPGTLPTTVRGMHEDP 410 Query: 166 GPAFDWARFRVLVSKE 181 GP +DWAR+ L+ K Sbjct: 411 GPFWDWARYFELLGKP 426 >UniRef50_D2AYL5 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AYL5_STRRD Length = 666 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 64/179 (35%), Gaps = 38/179 (21%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 ++D +V+H GE I L +S H Sbjct: 294 NHDRYDGPRRIDYIVIH-----DGESSYDAITRLTRN--------------PTYLSWHFT 334 Query: 78 IRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT---DTLAYTDAQYQQL 133 +R DG I Q++ WHAG N SIG+E EG YT+A Y+ Sbjct: 335 LRSGDGHIAQHLRGSDIGWHAGNWY------VNTRSIGLEHEGYLAKGGAWYTEAMYRSS 388 Query: 134 AAVTRALIDCY--PDIAKNMTGHCDIAPDR-------KTDPGPAFDWARFRVLVSKETT 183 AA+ L Y P ++ GH ++ DPGP +DWA + L+ T Sbjct: 389 AALVAHLARKYGVPLNRAHIIGHDNVPGTTPEGVRDMHQDPGPYWDWAHYFELLGSPLT 447 >UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=2 Tax=Prochlorococcus marinus RepID=Q7V7M8_PROMM Length = 312 Score = 111 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 35/174 (20%) Query: 22 RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRD 81 R D TP+++++H + AL+ A + +VS H LI D Sbjct: 139 RRVDPTPSVVILHET-------TDSYQSALY-------AFKDYHRKDEDQVSYHTLITLD 184 Query: 82 GEIVQYVPFDKRAWHAGVSQYQGRE---------RCNDFSIGIELE--------GTDTLA 124 G+I+ V RA+ AG S + G N+F++ + LE + Sbjct: 185 GQIIDVVDPLNRAYGAGNSAFLGEWVVTNPRFKGSVNNFALHLSLETPWDGRNGYLNHSG 244 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTG--HCDIAPDRKTDPGPAFDWARFRV 176 Y+D QY LA V +D + +N+T H D+A +R +DP +FDW+ + Sbjct: 245 YSDKQYDSLALVLADWMDRFNIPPENITTHQHVDLAGER-SDP-RSFDWSNLQR 296 >UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM08_DESAH Length = 439 Score = 109 bits (273), Expect = 5e-23, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 3/100 (3%) Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQL 133 A+ +I R+G Q + R+ HAG+S + G+ + S+GIEL G T AQY+ + Sbjct: 100 ANYVIARNGVTYQIMDKQFRSDHAGLSMWNGQNDISSVSLGIELVGHHYAPLTSAQYRSV 159 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR 173 A + L Y K + H +A R P P F+ Sbjct: 160 AMLIDMLQKAYGLDDKAVLTHSQVAYGR---PNPWFNENH 196 >UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NVA7_SODGM Length = 201 Score = 108 bits (270), Expect = 1e-22, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 9/87 (10%) Query: 97 AGVSQYQGRERCNDFSIGIELEGTDT--------LAYTDAQYQQLAAVTRALIDCYP-DI 147 A S + GR ND SIGIE + Y Q + + + ++ YP Sbjct: 42 AAFSAWAGRNNLNDTSIGIENVNLASVKNGKLIFPPYHPVQIAAIIQLAQDILQRYPDIT 101 Query: 148 AKNMTGHCDIAPDRKTDPGPAFDWARF 174 + GH D+AP RK DPG AF W Sbjct: 102 PTQIIGHSDVAPGRKFDPGAAFPWQTL 128 >UniRef50_D1SBP4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SBP4_9ACTO Length = 677 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 70/199 (35%), Gaps = 51/199 (25%) Query: 9 VGARRVPSP------------HYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTG 54 + +P+P ++D RP + +V+H+ G A + G Sbjct: 266 LACEWIPAPYEQLSDDPGDYGNHDLGDRPKQQKIEYIVIHDTEGYFGPSVDLVKRADYLG 325 Query: 55 TIDPQAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSI 113 H +R DG I Q++ WHAG N SI Sbjct: 326 -------------------WHYTLRSVDGYIAQHIKTKDVGWHAGNWY------VNAKSI 360 Query: 114 GIELEGTDTL--AYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAP-------DRK 162 G+E EG YT+A Y+ A + R L P +++ GH ++ Sbjct: 361 GLEHEGFAGQGTWYTEAMYRTSAKLVRHLALKLGIPMDRQHIIGHDNVPGINAGAVGGMH 420 Query: 163 TDPGPAFDWARFRVLVSKE 181 DPGP +DW+ + L+ Sbjct: 421 WDPGPYWDWSHYFDLMKAP 439 >UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3QCK8_RHOPT Length = 464 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 66/204 (32%), Gaps = 62/204 (30%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P ++V+H+ + G SAH +I RDG Sbjct: 26 GGPIVPKVIVLHDTAGHLHGRDSIVWLRGGPGQ-------------SQNSSAHVVIGRDG 72 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD--------------------- 121 I Q F+ + WHAG+S ++GR N +++GIE+ Sbjct: 73 TITQLAAFNVKTWHAGISNWRGRANLNGWAVGIEIVNPGGPLRTLGNGRYQGIDLIDTKA 132 Query: 122 ---------------------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGH 154 L ++ Q + + RAL+ YP I + + H Sbjct: 133 DPSLKVRPGVFPPLTPDGKAVPRTAGYWLEHSPEQIDAVVELCRALVAAYPTITE-IVTH 191 Query: 155 CDIAPDRKTDPGPAFDWARFRVLV 178 IAP RK D P F R V Sbjct: 192 WMIAPTRKVDTNPLFPIDEVRRRV 215 >UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synechococcus sp. RCC307 RepID=A5GTP3_SYNR3 Length = 297 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 67/184 (36%), Gaps = 41/184 (22%) Query: 18 HYDCR--------PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 +Y R D TP ++V+H + D Sbjct: 119 NYGERVHLDAQGQRIDPTPAVIVLHET-VYSLGSAINTFTTPHPNDAD------------ 165 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE---------RCNDFSIGIELEGT 120 + S H L+ + GEIVQ V KRA+ AG S + GR N+F++ + LE Sbjct: 166 -QASYHTLVGQKGEIVQVVDPSKRAYGAGHSAFDGRWVFTSKHFSGSLNNFALHVSLETP 224 Query: 121 --------DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDR-KTDPGPAFDW 171 YT AQY L+ V + Y +T H + ++DP +FDW Sbjct: 225 PDGATSAQKHSGYTPAQYDALSRVLADWMVRYKIEPHAITTHRHVDLGNARSDP-RSFDW 283 Query: 172 ARFR 175 + + Sbjct: 284 QQLQ 287 >UniRef50_A8FVJ2 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FVJ2_SHESH Length = 259 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 71/195 (36%), Gaps = 43/195 (22%) Query: 6 GWLVGARRVPSPHYDCRPDD--ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 GWL R R D E+ +V+H + G A+ T Sbjct: 54 GWLTKNRAR------SRGRDVFESIDTIVIHATA------GYATKHAVDTWK-------- 93 Query: 64 FAEIAHLRVSAHCLIRRDGE------IVQYVPFDKRAWHAGVSQYQGRE----RCNDFSI 113 + SAH +I + E I V K A+H G Y ND S+ Sbjct: 94 -----ERKASAHWIIPDENEAEHGHFIWAMVAESKAAYHVGNVDYASILGEGLNVNDRSL 148 Query: 114 GIELEGTDT-----LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPA 168 G+EL T Y+ Q LA + YP++ K++ H + P R++DPG Sbjct: 149 GVELVNTQNVQYFRDPYSQWQIDMLARIVLYAWAKYPNL-KHVISHAKLDPARRSDPGEN 207 Query: 169 FDWARFRVLVSKETT 183 F W F+ V ++ Sbjct: 208 FPWEAFKHKVLSQSV 222 >UniRef50_C7Q860 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q860_CATAD Length = 589 Score = 105 bits (263), Expect = 7e-22, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 18/132 (13%) Query: 58 PQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117 A F +I+ VS H +I DG + Q V A+HAG Y N+ ++GIE Sbjct: 258 QDALTTFQDISKG-VSVHYVIDSDGTVYQVVREKDIAYHAGNFYY------NEHAVGIEH 310 Query: 118 EG---TDTLAYTDAQYQQLAAVTRALIDCYPDIAK--NMTGHCDI-APD-----RKTDPG 166 G T Y +Y A + L + Y ++T H AP DPG Sbjct: 311 AGIDATGYQWYNATEYLASAKLVAYLANKYNIPLDHAHITAHGTTPAPTTASSPNHVDPG 370 Query: 167 PAFDWARFRVLV 178 + W + L+ Sbjct: 371 KYWLWDYYFGLI 382 >UniRef50_Q5Z3U1 Putative uncharacterized protein n=1 Tax=Nocardia farcinica RepID=Q5Z3U1_NOCFA Length = 270 Score = 105 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 9/148 (6%) Query: 41 GEFGGPW-IDALFTGTIDPQAHP-FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAG 98 G+FG W + A TG+ P +P A+ L +++ + RDG V V AWHAG Sbjct: 30 GDFGEIWGVIAHHTGSNPPSNNPGHIAQHPQLGLASQLHLSRDG--VYTVCGVGIAWHAG 87 Query: 99 VSQYQG--RERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCD 156 Y G N +IGIE E T ++ QY A++ A N+ GH + Sbjct: 88 NGSYPGLPTNDANRVTIGIEAENNGTEGWSPRQYTAYVKGVAAILRKLGKGAGNVIGHKE 147 Query: 157 IAP--DRKTDPGPAFDWARFRVLVSKET 182 A K DPG D RFR V K Sbjct: 148 WAGAAQGKWDPG-GMDMNRFRADVQKAI 174 >UniRef50_Q3AXW0 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Chroococcales RepID=Q3AXW0_SYNS9 Length = 308 Score = 105 bits (262), Expect = 9e-22, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 35/174 (20%) Query: 22 RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRD 81 R D +P ++V+H ++ T HP I +VS H LI RD Sbjct: 140 RRLDGSPRVIVLHET----VYSVSSAVNTFQT------PHP----IDEDQVSYHTLISRD 185 Query: 82 GEIVQYVPFDKRAWHAGVSQYQGRE---------RCNDFSIGIELEGT--------DTLA 124 G ++ V RA+ AG S + G N+F++ + LE Sbjct: 186 GRVLDLVDPLMRAYGAGYSAFLGEWAITNKRLKGSVNNFALHLSLETPSNGANGRSGHSG 245 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTG--HCDIAPDRKTDPGPAFDWARFRV 176 Y+ QY LA V +D + ++T H DI +R DP +FDW+ +V Sbjct: 246 YSSEQYDALALVLAGWMDAFNLPPTSVTTHRHVDIGGER-ADP-RSFDWSALQV 297 >UniRef50_C0A8M7 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A8M7_9BACT Length = 141 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 50/116 (43%), Gaps = 4/116 (3%) Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT-LAYT 126 +VS H LI DG + V + AWHAG S + GR RCNDF +G+ G T Sbjct: 13 PESQVSYHVLIATDGVRARLVADEHIAWHAGASNFLGRTRCNDFLLGVSFAGNTRLTPLT 72 Query: 127 DAQYQ-QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 +AQ L + MT H IAP RK D PA +W R + Sbjct: 73 EAQIASALDWLAPRWFAR-GWTPAVMTDHRQIAPGRKDDLFPA-EWMRLLAAIRAR 126 >UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Synechococcus elongatus RepID=Q31KQ2_SYNE7 Length = 317 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 70/188 (37%), Gaps = 41/188 (21%) Query: 18 HYDCR--------PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 ++ R P D +L+V+H + + + D Sbjct: 120 NFGDRAAVDRNGQPVDNRISLIVLHET-VASADSAINFFQTPHPRDED------------ 166 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR---------ERCNDFSIGIELEGT 120 + S H LIRR+G IV VP +KRA+ AG S ++G N+FS+ + LE Sbjct: 167 -QASYHALIRRNGTIVYTVPPEKRAFGAGSSSFRGEAVRFNPKLPGSVNNFSLHVSLESP 225 Query: 121 D--------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP-DRKTDPGPAFDW 171 YT QY LA + + + Y +T H + + DP +F W Sbjct: 226 ADGRDNRRRHSGYTARQYDSLALLAQQWMTTYTIPGDRITTHAAVDRSGSRMDP-RSFQW 284 Query: 172 ARFRVLVS 179 AR + Sbjct: 285 ARLAQRLQ 292 >UniRef50_A9B3J4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3J4_HERA2 Length = 426 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 28/157 (17%) Query: 17 PHYDCRPDDE-TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 P+ R P +++H + G+++ P +R S + Sbjct: 12 PNKTARNTTSFKPEFVILHETAG--------------YGSLEWNLRP------EVRSSYN 51 Query: 76 CLIRRDGEIVQYVPFD-KRAWHAGVSQYQ---GRERCNDFSIGIELEG-TDTLAYTDAQY 130 LI RDG+ YV AWHAGV + N ++IG+E+EG D T AQ Sbjct: 52 YLIARDGKTYHYVNEKSYIAWHAGVRSWARGYSGGEINVYAIGVEVEGPNDGTPITTAQT 111 Query: 131 QQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDP 165 + L + R D Y P H +AP K DP Sbjct: 112 KALVELIRYFRDTYAIPINRDYFFAHSTVAPGYKDDP 148 >UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4Q5_ACIDE Length = 230 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 70/192 (36%), Gaps = 32/192 (16%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDET--PTLLVVHNISLPPGEFGGPWIDALFTGTIDP 58 ++L W G + R D +V+H + + DP Sbjct: 20 IILSDPWYPGVQSCWERCTTKRSVDPIYGIRAVVIHATAGTSSSGAISVMK----RRDDP 75 Query: 59 QAHPFFAEIAHLRVSAHCLIRRDGE------IVQYVPFDKRAWHAGVSQYQ-----GRER 107 S H L+ + E + P AWH + G R Sbjct: 76 -------------ASFHWLVPDEDEAQHGHLVWACAPEALAAWHVRNAASHPDVNGGAGR 122 Query: 108 CNDFSIGIELEG-TDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPG 166 N +S+GIE+ ++D Q + A + R YP++ K++ H + P R++DPG Sbjct: 123 VNHWSLGIEVVNAQKNDPFSDWQIEATARIVRYCWAKYPNL-KHVVSHAKLDPGRRSDPG 181 Query: 167 PAFDWARFRVLV 178 FDW RF+ LV Sbjct: 182 EHFDWLRFKSLV 193 >UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH65_HALO1 Length = 233 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 53/147 (36%), Gaps = 17/147 (11%) Query: 28 PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQY 87 P ++ H + PG + T + S H I +G I Q Sbjct: 85 PLAIMAHYTATDPGTARAMAERRVRERTSQ-----------NRPASWHITIDHEGTIWQM 133 Query: 88 VPFDKRAWHAGVSQYQG----RERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDC 143 V AWH + G + N +GIELEG +T AQ + V RAL+ Sbjct: 134 VAASACAWHCARGKVDGPSGKKLSINQAVVGIELEGHGEE-FTAAQIEAACRVWRALVRT 192 Query: 144 YPDIAK-NMTGHCDIAPDRKTDPGPAF 169 Y M H P R+ DPGP + Sbjct: 193 YAIPDHLAMLEHSRYDPGRRVDPGPVW 219 >UniRef50_Q2SEW1 Negative regulator of beta-lactamase expression n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEW1_HAHCH Length = 199 Score = 98.4 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 67/187 (35%), Gaps = 35/187 (18%) Query: 8 LVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 A P+ ++ P +++H P +AL T P Sbjct: 19 YPNALWSPAANFRIPPGRRDIRYIIIHITGGP----ALTERNALNTFRAGP--------- 65 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLA 124 SAH ++ R+G +VQ V A H + N SIGIE + Sbjct: 66 ----ASAHYIVNREGRVVQTVREAHIANHVDNIH----SQTNRESIGIEHVNPWDPNPRT 117 Query: 125 Y-TDAQYQQLAAVTRALIDCYPDIAKN--------MTGHCDIAP--DRKTDPGPAFDWAR 173 Y TDAQY A + L Y ++ + GH + AP +T P PA++W Sbjct: 118 YPTDAQYMASARLVAWLCHRYGIPVRHETAPHTAGIRGHIEEAPHSGHRTCPNPAWNWDL 177 Query: 174 FRVLVSK 180 + LV Sbjct: 178 YIDLVRS 184 >UniRef50_B9XDJ7 N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=bacterium Ellin514 RepID=B9XDJ7_9BACT Length = 1809 Score = 98.0 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 53/155 (34%), Gaps = 38/155 (24%) Query: 59 QAHPFFAEIAHLRVSAHCLIR---------RDGEIVQYVPFDKRAWHAGVSQYQGRERCN 109 + + + + + S H + GE+ Q V AWH N Sbjct: 74 ASTISYFQRSSTQASVHYCVNGKQDSSTDYPAGEVTQMVREAYYAWH--------VLCWN 125 Query: 110 DFSIGIELEGTDTLA--YTDAQYQQLAAVTRALIDCYPD--IAKNMTGHCD--------- 156 + G E EG + YTDA Y + R L D Y ++ GH Sbjct: 126 HYCAGTEHEGFASNPAWYTDAMYNSSGLLQRHLCDHYGIAKDRNHIVGHNAWQSSAWRTY 185 Query: 157 ------IAPD--RKTDPGPAFDWARFRVLVSKETT 183 I P+ TDPGP ++W + +V ++ Sbjct: 186 ASANFGIDPNCNSHTDPGPYWNWTKLMNVVLGTSS 220 >UniRef50_B2A1Q6 N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1Q6_NATTJ Length = 235 Score = 97.6 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 23/151 (15%) Query: 18 HYDCRPDDETPTLLVVHNIS-LPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 +Y R ++T + LV+H+ PG D +AH + + SAH Sbjct: 11 NYSSR-QNQTISYLVIHDTGNSRPGA--------------DAKAHYHYFNAGNRSASAHY 55 Query: 77 LIRRDGEIVQYVPFDKRAWHAGVSQYQGRERC-NDFSIGIELEGTDTLAYTDAQYQQLAA 135 + D +I+Q V +WH G +GR N SIGIE+ Y A +Q Sbjct: 56 FVD-DTQILQLVEDHHASWHCGDG--RGRYGITNSNSIGIEICINSDGNYAKA-VEQTIK 111 Query: 136 VTRALIDCYPDIAKNMTGHCDIAPDRKTDPG 166 +T L + Y + H D++ RK PG Sbjct: 112 LTAYLAEKYTIPHNKIVRHYDVS--RKICPG 140 >UniRef50_A5IAD5 N-acetylmuramoyl-L-alanine amidase; amidase 2 n=7 Tax=Bacteria RepID=A5IAD5_LEGPC Length = 232 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 66/160 (41%), Gaps = 29/160 (18%) Query: 27 TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ 86 P ++V+H +P + D T P+ + L VS+H L+ RDG I Q Sbjct: 74 EPKMIVLHWTCIPSLDTTFRIFDPPALPTSSPRRNEL---PGDLNVSSHFLVDRDGTIYQ 130 Query: 87 YVPFDKRAWHAGVSQYQGRERCNDFSIGIE-LEGTDT-LAYTDAQYQQLAAVTRALIDCY 144 +P A H N ++IGIE + G D+ TD Q + A + L + Y Sbjct: 131 LMPETWMARH--------VIGLNHYAIGIENIGGVDSKDDLTDEQVKANAFLVCYLKNKY 182 Query: 145 PDIAKNMTGHCDI------------APD---RKTDPGPAF 169 P I K + GH + P+ KTDPGP F Sbjct: 183 PQI-KYLIGHNEYLQYKGTALWLEKDPNYQTDKTDPGPTF 221 >UniRef50_Q7NG55 Glr3318 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NG55_GLOVI Length = 228 Score = 94.5 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 68/182 (37%), Gaps = 35/182 (19%) Query: 18 HYDC--RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTID--PQAHPFFAEIAHLRVS 73 HYD R P ++VVH G A T T D P + L VS Sbjct: 56 HYDPEARDIAIIPRMVVVHWTG------DGNLTSAFATFTPDRLPSVRADLKKGGALNVS 109 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQL 133 H ++ RDG I + + + A H N +IGIE G TDAQ Sbjct: 110 THFVVDRDGTIYRLMDEKRLARH--------VIGLNWTAIGIENIGGPRRPLTDAQLAAN 161 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDR---------------KTDPGPAFDWARFRVLV 178 A + R L + +P IA + GH + R K+DPG F AR R + Sbjct: 162 AWLVRDLANRHPTIAY-LIGHHEYGRFRGSLLWRERVAGYFTGKSDPGADF-MARLRARL 219 Query: 179 SK 180 + Sbjct: 220 QE 221 >UniRef50_UPI0001B554B9 secreted amidase n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B554B9 Length = 639 Score = 94.1 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 61/177 (34%), Gaps = 39/177 (22%) Query: 20 DCRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS-AHCL 77 RP + +V+H A VS AH L Sbjct: 260 SDRPANGIAIDRIVLHTAEGSFASAKQSL-------------------SAPGAVSGAHYL 300 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTDAQYQQLA 134 + DG Q + A+ G Y N S+ IE G YTDA YQ+ A Sbjct: 301 MDTDGTTTQLMANKDLAFAVGNYHY------NLHSVSIEQAGFTARGADWYTDAVYQRTA 354 Query: 135 AVTRALIDCY--PDIAKNMTGHCDIAP-------DRKTDPGPAFDWARFRVLVSKET 182 + + L + Y P +++ GH ++ + D G A+DW RF L+ T Sbjct: 355 ELVKYLAERYDVPLDRQHVLGHDNVPGSLDSNLAAQHWDKGTAWDWNRFMRLLGAPT 411 >UniRef50_B8HV25 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV25_CYAP4 Length = 274 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 54/206 (26%), Positives = 77/206 (37%), Gaps = 57/206 (27%) Query: 4 EQGWLVGARRVPSPHYDCR--------PDDETPTLLVVHNISLPPGEFGGPWIDALFTGT 55 E W+ + +Y R P TL+V+H + G I A T Sbjct: 90 ENAWVDPS------NYGERLTQDAFGHPISSRVTLVVLHETVIS----GRAAIAAFQTNR 139 Query: 56 IDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE--------- 106 D A + S H LI R+G +V VP +KRA+ AG S + G Sbjct: 140 PDDLA----------QASYHDLILRNGTVVHLVPLEKRAFGAGNSVFYGANGPETVQTNP 189 Query: 107 ----RCNDFSIGIEL--------EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGH 154 N+FS I L E YT A+YQ LA + +A + +T H Sbjct: 190 KLPSSVNNFSYHISLESPADGNNENATHSGYTAAEYQSLAWLIKAA----GIPSNRITTH 245 Query: 155 CDI--APDRKTDPGPAFDWARFRVLV 178 + RK DP +FD+ + L+ Sbjct: 246 YAVDRTGTRK-DP-RSFDYTKLFELL 269 >UniRef50_P81717 N-acetylmuramoyl-L-alanine amidase A n=1 Tax=Achromobacter lyticus RepID=CWHA_ACHLY Length = 177 Score = 93.7 bits (232), Expect = 3e-18, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 30/152 (19%) Query: 51 LFTGTIDPQAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCN 109 + T + + +VSAH LIR+ DG+I Q V +AWHA + N Sbjct: 29 MHTMEGSYAGSISWFQNPSAQVSAHYLIRKSDGQITQMVREYHQAWHA--------KNHN 80 Query: 110 DFSIGIELEGTDTLA--YTDAQYQQLAAVTRALIDCYPD------------------IAK 149 ++IGIE +G A ++ A A +T+++ + Sbjct: 81 YYTIGIEHDGRAADAGNWSAAMVNASARLTKSICARRGVNCASAWKGPGYDTFHLVPDSV 140 Query: 150 NMTGHCDIAPD-RKTDPGPAFDWARFRVLVSK 180 + GH ++ + + DPG F W+ + L++ Sbjct: 141 RVKGHGMLSGNENRYDPGKYFPWSNYYNLING 172 >UniRef50_B6BGC2 B-N-acetylglucosaminidase, glycoside hydrolase family 3 protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGC2_9PROT Length = 555 Score = 93.4 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 32/180 (17%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 +D + + P +V+H ++ E L T+ A+ L VS+H L+ Sbjct: 384 FDVQNINIKPKAIVLHWTAVMDFE---DCFKRLKGNTLYSDRG-DIADAGALNVSSHFLV 439 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL---AYTDAQYQQLAA 135 RDG I Q +P + A H N SIGIE G + T Q Sbjct: 440 ARDGTIYQLMPDNWMARH--------VIGLNYSSIGIENVGGEDNVKDDLTPEQVDANIK 491 Query: 136 VTRALIDCYPDIAKNMTGHCDI-------------APDR--KTDPGPAFDWARFRVLVSK 180 + + L YP+I + + GH + A R K DPG F R R V++ Sbjct: 492 LVKYLKAKYPNI-EYLIGHHEYTQMEKTPLWLEKDAEYRTKKADPGEKF-MNRVRKHVAE 549 >UniRef50_Q05S34 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Synechococcus sp. RS9916 RepID=Q05S34_9SYNE Length = 292 Score = 91.4 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 67/185 (36%), Gaps = 41/185 (22%) Query: 16 SPHYDCRPD--------DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 S ++ R +P L+V+H I T + HP + Sbjct: 100 STNFGTRESVDDWGRTLKASPELIVLHET----------VISEPATVNLFQTPHPRDED- 148 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE---------RCNDFSIGIELE 118 +VS H LI DG ++ VP RA+ +G+S + N+ ++ + L Sbjct: 149 ---QVSYHMLIATDGARLRIVPDQNRAYGSGMSAFGDATQRRQPGRVGSINNVALHVSLV 205 Query: 119 GT--------DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDR-KTDPGPAF 169 YT++QY+ LAA Y +T H + R + DP +F Sbjct: 206 TPADGRGNTDAHSGYTNSQYRSLAAQVLLWQAKYGIPLTRVTTHAAVDRSRTRYDP-RSF 264 Query: 170 DWARF 174 W RF Sbjct: 265 RWDRF 269 >UniRef50_A0M513 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gramella forsetii KT0803 RepID=A0M513_GRAFK Length = 223 Score = 91.4 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 30/159 (18%) Query: 27 TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ 86 P ++V+H +P E F + PQ+ + + L VS+H L+ ++G I + Sbjct: 59 DPKMIVLHWTEIPTLEDSF----RAFKNSKLPQSREAISGASQLNVSSHFLVDKNGAIYR 114 Query: 87 YVPFDKRAWHAGVSQYQGRERCNDFSIGIE-LEGTDTLAYTDAQYQQLAAVTRALIDCYP 145 +P A H N +IG+E + GT T AQ + L D Y Sbjct: 115 LMPETVMARH--------VIGLNHTAIGVENVGGTKDTPLTAAQVASNIWLVNYLSDKYN 166 Query: 146 DIAKNMTGHCDI-------------APDR--KTDPGPAF 169 + + GH + + R K DPG F Sbjct: 167 I--QYVIGHYEYTNFEGHDLWLEKDSGYRTMKVDPGEEF 203 >UniRef50_B9XDJ6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=bacterium Ellin514 RepID=B9XDJ6_9BACT Length = 337 Score = 90.3 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 53/154 (34%), Gaps = 38/154 (24%) Query: 60 AHPFFAEIAHLRVSAHCLI---------RRDGEIVQYVPFDKRAWHAGVSQYQGRERCND 110 + + + + + S H + GE+ Q V AWH N Sbjct: 61 STISYFQQSGTQASIHYCVNGKQDTGTDAPAGELTQMVSEAYYAWH--------VLCWNT 112 Query: 111 FSIGIELEGTDTLA--YTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAP------- 159 + G E EG + YTDA Y + R L D Y P ++ GH + Sbjct: 113 YCAGTEHEGFASNPAWYTDAMYNTSGLLQRHLCDHYGIPKDRNHIVGHDEWQNAAWCTYA 172 Query: 160 ----------DRKTDPGPAFDWARFRVLVSKETT 183 + TDPG +DW + +V+ TT Sbjct: 173 SAHFGIDTTCNSHTDPGQYWDWNKLMSIVNPTTT 206 >UniRef50_UPI00016C05EA N-acetylmuramoyl-L-alanine amidase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C05EA Length = 197 Score = 90.3 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 26/153 (16%) Query: 17 PHYDCRPD--DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 P+ RP E + +VVH ++ P G+ +F + S+ Sbjct: 40 PNPMSRPGFPMEKISGIVVHYVNNP--------------GSTAENNRDYFNSLTERYASS 85 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQL 133 H ++ GEI+ VP ++ A+HAG N IGIE+ DT ++D Y L Sbjct: 86 HYIVGLQGEIILCVPEEEVAYHAGN------RNVNYSHIGIEVCHPDTFGKFSDITYNSL 139 Query: 134 AAVTRALIDCYPDIAK-NMTGHCDIAPDRKTDP 165 +T+ L Y + ++ H D+ K P Sbjct: 140 IDLTKQLCRKYKLNPQTDVIRHYDV--TEKLCP 170 >UniRef50_Q8DLW7 Tlr0359 protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DLW7_THEEB Length = 287 Score = 89.5 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 28/145 (19%) Query: 55 TIDPQAHPF-FAEIAHL----RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE--- 106 T+D A F + HL + S H LI +G ++ VP+ KRA+ AG S + Sbjct: 133 TVDSAASALNFFQTPHLRDEEQASYHELITLNGWLLHLVPWSKRAYGAGNSAFGKEAAQT 192 Query: 107 ------RCNDFSIGIELE--------GTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMT 152 N+F++ LE G YTDAQY+ LA + + +T Sbjct: 193 NPRLAPSVNNFALHFSLETPPQGRHNGPSHTGYTDAQYRTLAWLV----AQTGIDRQRVT 248 Query: 153 GHCDIAP-DRKTDPGPAFDWARFRV 176 H + + DP +FDW +F Sbjct: 249 THAAVDRSGERMDP-RSFDWVKFNR 272 >UniRef50_B9XPB1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=bacterium Ellin514 RepID=B9XPB1_9BACT Length = 586 Score = 88.7 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 44/123 (35%), Gaps = 30/123 (24%) Query: 82 GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA--YTDAQYQQLAAVTRA 139 GEI Q V AWH G N + G E EG Y++A YQ A + R Sbjct: 125 GEITQMVREANYAWHVGCW--------NTWMAGTEHEGFANNPAWYSEAMYQASAGLQRH 176 Query: 140 LIDCY--PDIAKNMTGHCDIAP------------------DRKTDPGPAFDWARFRVLVS 179 + Y P ++ H + + TDPG +DW F LVS Sbjct: 177 MASAYGIPIDRNHIIAHGEWQNASWKTWMAANYPSIDTTCNSHTDPGIYWDWTHFMDLVS 236 Query: 180 KET 182 T Sbjct: 237 STT 239 >UniRef50_C0CQ24 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C0CQ24_9FIRM Length = 279 Score = 87.6 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 28/169 (16%) Query: 21 CRPDD--ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 RP E + +H + P F G D ++ VS+H ++ Sbjct: 124 SRPGTPLEEVKYVAIHYTANPGSTAKNN--RDYFEGLKDNHSN---------EVSSHFVV 172 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLAAVT 137 +GEIVQ +P ++ ++ N ++ IE D + +A YQ L +T Sbjct: 173 GLEGEIVQCIPTNEISY--------ATNSRNVDTLSIECCHLDETGKFNEATYQSLVELT 224 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD----WARFRVLVSKET 182 L + + ++ H D+ K P + W + + +S E Sbjct: 225 AYLCNRFGLDIDHVIRHYDVTG--KNCPKYYVEHPEAWEQLKKDISAEM 271 >UniRef50_C0G0C8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Natrialba magadii ATCC 43099 RepID=C0G0C8_NATMA Length = 321 Score = 87.6 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 56/200 (28%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 R V + ++ R D + +V+H + + G ++ + Sbjct: 67 RWVEAANHSAR--DHSIDWIVIHVTA------------GAYQGALNT------LTSSDSG 106 Query: 72 VSAHCLIR--------RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 VS+H L++ G + Q V D+ AWHA R N SIGIE E D Sbjct: 107 VSSHYLVKNYDWTDGPEAGHVDQLVHHDRAAWHA-------RSIANHRSIGIEHEWFDDN 159 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAK-------------NMTGHCDIAPDR--------K 162 +DA Y+ A + R + D + + + GH + + Sbjct: 160 GISDACYESSAELVRCIADMHDIPLEFYTSNTCIQNESGGIIGHTHVPDGDCSSFHHGGR 219 Query: 163 TDPGPAFDWARFRVLVSKET 182 T P P +D F LV +E Sbjct: 220 TCPYPDWDMDHFESLVKEED 239 >UniRef50_C0WEF9 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WEF9_9FIRM Length = 221 Score = 87.2 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 63/181 (34%), Gaps = 36/181 (19%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 HY D P +VVH + E + A + L V A L Sbjct: 55 HYGREMTDIKPRAVVVHWTANDSQEGTYQFFYAEENPRLSY---------GTLNVGAQFL 105 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAA 135 + RDG I Q +P A HA N +IGIE G T+AQ + A Sbjct: 106 VGRDGAIWQLMPETALARHA--------IGLNWCAIGIENVGGARGKEDLTEAQLRANIA 157 Query: 136 VTRALIDCYPDIAKNMTGHC-------------DIAPD--RKTDPGPAFDWARFRVLVSK 180 + L D YP + + GH D+ K DPGP F R ++K Sbjct: 158 LISYLKDKYPTLTT-VLGHYEQDKAKQTDLWREDVPNYYHGKIDPGPTF-MKGLREALTK 215 Query: 181 E 181 + Sbjct: 216 K 216 >UniRef50_A0YR44 AmpD n=3 Tax=Oscillatoriales RepID=A0YR44_9CYAN Length = 301 Score = 86.8 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 69/189 (36%), Gaps = 46/189 (24%) Query: 18 HYDCR--------PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 +Y R P TP ++V+H + + + T D Sbjct: 115 NYGQRYLYDVSGKPVTNTP-IVVLHETA-ATAQSTINFFQTYHTDEDD------------ 160 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE---------RCNDFSIGIELE-- 118 + S H LI +G++V VP D RA+ AG S +QG N+F+ + LE Sbjct: 161 -QASYHTLITLNGDVVYIVPPDLRAYGAGNSVFQGEAVQTDAKFPPSVNNFAYHVSLETP 219 Query: 119 ------GTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP-DRKTDPGPAFDW 171 G YT AQYQ LA + +T H + ++DP FD Sbjct: 220 PDGLRNGASHSGYTTAQYQSLAWLV----AQTGIPENRITTHQAVDRSGERSDP-RRFDQ 274 Query: 172 ARFRVLVSK 180 F L+ + Sbjct: 275 QLFLQLLRR 283 >UniRef50_A3HZ10 Putative uncharacterized protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HZ10_9SPHI Length = 223 Score = 86.4 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 59/171 (34%), Gaps = 31/171 (18%) Query: 20 DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR 79 D P ++VVH ++ E D+ G + L VS+ LI Sbjct: 55 DQTEATIDPKIVVVHWTAINSVEATFDVFDSPTLG-----GREDLRNASGLNVSSQFLID 109 Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRA 139 RDG I + +P A H N +IGIE G+ T Q + + R Sbjct: 110 RDGTIFRLLPETTFARH--------TIGLNYTAIGIENVGSPDDPLTKEQLKANEMLIRH 161 Query: 140 LIDCYPDIAKNMTGHCDI-------------APDR--KTDPGPAFDWARFR 175 L YP + GH + R KTDPG AF + R Sbjct: 162 LRKKYPID--YVIGHHEYQNFQETDFWKEADPNYRTVKTDPGDAF-MEKLR 209 >UniRef50_A0Q0S8 N-acetylmuramoyl-L-alanine amidase cwlL (Cellwall hydrolase) (Autolysin) n=7 Tax=Clostridiales RepID=A0Q0S8_CLONN Length = 431 Score = 86.4 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 49/150 (32%), Gaps = 25/150 (16%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQ-AHPFFAEIAHLRVSAHC 76 +Y+ +V+H+ D A+ + + SAH Sbjct: 163 NYN-HSSGNNIKFIVMHDTG----------------NYKDTALANANYFGGGNRNASAHY 205 Query: 77 LIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY-TDAQYQQLAA 135 + + IVQ V AWH G N SIGIE+ + Y DA Sbjct: 206 FVDEN-NIVQVVEDSNAAWHCGDGH-GNYGITNHNSIGIEMCNSG--GYIADATINNALW 261 Query: 136 VTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 + + L Y N+ H D + RK P Sbjct: 262 LVKKLQAKYNIDNDNVVRHYDAS--RKNCP 289 >UniRef50_A9AWP8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWP8_HERA2 Length = 250 Score = 86.4 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 23/155 (14%) Query: 20 DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR 79 D RP P+ V+H + G D L A V AH L+ Sbjct: 21 DYRPKGIKPSSAVIHTTNGNRGSSFEAEADYLE---------------ASSGVGAHYLVG 65 Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRA 139 + G+I + +P RAWHAG ++ + N SIGIE A+T Q LA + + Sbjct: 66 QRGQIAEILPPIYRAWHAGAAK---DDWINSRSIGIECHHAVGEAWTHEQRAALAWLCQR 122 Query: 140 LIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWA 172 L+ + + + H +A RK DP DW Sbjct: 123 LMADWSIVLGAIETHRFVALPAGRKPDPS---DWT 154 >UniRef50_Q5WIB6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIB6_BACSK Length = 301 Score = 86.0 bits (212), Expect = 5e-16, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 64/174 (36%), Gaps = 24/174 (13%) Query: 11 ARRVPSPHYDCRPDDE-TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 + + S RP D PT + VH G A+ Sbjct: 4 VQDLISKSASNRPGDRLNPTHITVHETGNTSKGADAAMHARYIKG----------ADARA 53 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQ 129 +VS H + D +I+Q+VP ++RAWHAG N SIG+E+ + A+ Sbjct: 54 RKVSWHYTVD-DKQIIQHVPDNERAWHAGSG--------NAKSIGVEICVNSDGNFEKAK 104 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-DWARFRVLVSKET 182 A + R L+ + N+ H K P +W F+ L+S E Sbjct: 105 SNA-AWLLRNLMSKHNISLSNVVTHKYWTG--KNCPARLLKEWNAFKQLISNED 155 >UniRef50_C5PKQ4 Putative uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C5PKQ4_9SPHI Length = 237 Score = 84.9 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 66/178 (37%), Gaps = 31/178 (17%) Query: 20 DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR 79 D + P ++VVH + + + P + + L VS+ +I Sbjct: 70 DQKKAVIKPQIVVVHWTANNSVKSTFNAF-----NPVQLPGRPELTKASKLNVSSQYVID 124 Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRA 139 RDG I Q++P A H N +IGIE G++ TDAQ + + Sbjct: 125 RDGTIYQFLPDTVFARH--------TIGLNYCAIGIENIGSEKNPLTDAQLKANTQLIDL 176 Query: 140 LIDCYPDIAKNMTGH------------CDIAPD---RKTDPGPAFDWARFRVLVSKET 182 L + YP + + GH + P+ K+DPG F R R + T Sbjct: 177 LSEKYPI--ELVIGHLEYKQFKKTKWWKETDPNYITGKSDPGLDF-MKRLRSGLKNTT 231 >UniRef50_B9XKL0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=bacterium Ellin514 RepID=B9XKL0_9BACT Length = 594 Score = 84.9 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 46/120 (38%), Gaps = 30/120 (25%) Query: 82 GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAAVTRA 139 GEI Q V A+H G N + G E EG + YT+A Y+ A + R Sbjct: 115 GEITQMVREQYYAYHVGCW--------NLWMFGTEHEGFVNNPAWYTEAMYRASADLQRH 166 Query: 140 LIDCY--PDIAKNMTGHCDIAP------------------DRKTDPGPAFDWARFRVLVS 179 L D Y P ++ H + + TDPG ++W+ F L++ Sbjct: 167 LCDNYGIPKDRNHIIAHGEWQNASWKTYMATNYASIDTTCNTHTDPGVYWNWSHFMQLIT 226 >UniRef50_C7UBT6 Sporulation domain-containing protein n=3 Tax=Bacilli RepID=C7UBT6_ENTFA Length = 306 Score = 84.5 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 43/133 (32%), Gaps = 28/133 (21%) Query: 17 PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 PHY +V+H+++ + P + SAH Sbjct: 16 PHYSSGRSGAKVNKIVIHHMAGT-----------------NYDIVPSIWQTR--EASAHY 56 Query: 77 LIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYT---DAQYQQL 133 I ++GEI YV + AWHAG N SIGIE ++ A Sbjct: 57 GIGKNGEIRAYVDENNTAWHAGNWNA------NISSIGIENCNSNGSPSWSVNQATIDAC 110 Query: 134 AAVTRALIDCYPD 146 A + + + Sbjct: 111 AKLVADIAKRHGL 123 >UniRef50_Q30PL8 Negative regulator of AmpC, AmpD n=4 Tax=Bacteria RepID=Q30PL8_SULDN Length = 219 Score = 84.1 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 53/141 (37%), Gaps = 15/141 (10%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 + D + TP ++V+H+ ++ F P A L VSAH + Sbjct: 44 NLDVKDIKITPKIIVIHHTAIDDFNASLS----CFKDQTLPNARADIHRGGALNVSAHFI 99 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAA 135 + RDG I Q +P D A H N SIGIE G T Q + Sbjct: 100 VDRDGTIHQLMPLDIMARH--------VIGLNYNSIGIENVGGQNSKDNLTPEQLRANIE 151 Query: 136 VTRALIDCYPDIAKNMTGHCD 156 + L +P+I + GH + Sbjct: 152 LVAELKRRFPEI-DYVIGHYE 171 >UniRef50_Q160K6 N-acetyl-anhydromuramyl-L-alanine amidase, putative n=2 Tax=Roseobacter RepID=Q160K6_ROSDO Length = 352 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 69/197 (35%), Gaps = 69/197 (35%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 + TPT +VVH + G ++AL + + S + L+ DG Sbjct: 59 GNPMTPTRIVVHYTA---GSSLSGAVNALKSRGL----------------SYNVLVDLDG 99 Query: 83 EIVQYVPFDKRAWHAGVSQYQ------GRERCNDFSIGIELEGTD--------------- 121 + Q F++RA HAG S ++ + N +I I L Sbjct: 100 SLHQARAFNRRAGHAGRSNFKATSGLKNQSSLNGSTIAISLVNLGFHEHFSGGHWWYARS 159 Query: 122 ----------------------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTG 153 + YTDAQ A+ AL+ YP I + + G Sbjct: 160 KGKLRGPKVVDVEANKMSSIYNPGLVMHWVPYTDAQVASCEALIEALVAKYPSITE-IVG 218 Query: 154 HCDIAPDRKTDPGPAFD 170 H D++ + K DPGPA Sbjct: 219 HDDVSINAKLDPGPALP 235 >UniRef50_A7NJ74 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Chloroflexaceae RepID=A7NJ74_ROSCS Length = 644 Score = 83.7 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 29/168 (17%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 A R PS Y R L+V+H + P + +++ A P + H Sbjct: 499 AGRAPSA-YGSR-SGSKIRLIVLHGDAGPALQ------------SLETMAMPGSPRMPHY 544 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG-RERCNDFSIGIELEGTDTLAYTDAQ 129 V+AH G I Q + + A+H+G++ + G R N SIG+ LE YTDA Sbjct: 545 YVAAH------GAIYQLIDDEFAAFHSGMAYWDGARRNINRSSIGVMLE-RPHTGYTDAS 597 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTD----PGPAFDWAR 173 + L+ + L Y A + D++PD D PG +W R Sbjct: 598 QRALSWLIAHLRAKYNIPASGVVRWSDLSPDAAGDLADLPG---NWYR 642 >UniRef50_Q92IC3 Putative N-acetylmuramoyl-L-alanine amidase RC0497 n=9 Tax=Rickettsia RepID=Y497_RICCN Length = 267 Score = 83.7 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 63/175 (36%), Gaps = 29/175 (16%) Query: 10 GARRVPSPH---YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAE 66 G SP+ RP+ PT +V+ T ++ Sbjct: 11 GISNTNSPNGKYMAPRPEGVKPTCVVI-------------------TYSVSKDIKAVREV 51 Query: 67 IAHLRVSAHCLIRRDGEIVQYVPF-DKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 + S H +I +DG +Y +A++AG S ++G N F IG+ L + Sbjct: 52 LDERGASVHYIIDKDGTQKEYHNDLTDQAFYAGKSSWKGEVGVNKFGIGVMLINDAKSDF 111 Query: 126 TDAQYQQLAAVTRALIDCYP--DIAKNMTGHCDIAPDR----KTDPGPAFDWARF 174 Q +L + + + YP D+ ++ G ++ +R PG F W Sbjct: 112 PAEQIGKLKEFLKDVTERYPNLDLKHDLVGLGEVTVNREGNAHIAPGSKFPWKEL 166 >UniRef50_D2QH68 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QH68_9SPHI Length = 229 Score = 83.0 bits (204), Expect = 5e-15, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 34/158 (21%) Query: 28 PTLLVVHNISLPPGEFGGPWID-ALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ 86 P ++V+H ++P + ++ TG D QA + L +S L+ RDG I + Sbjct: 69 PKMIVLHWTAVPTLRAAFDLFNPSVLTGRADLQAA------SRLNISVPFLVDRDGTIYR 122 Query: 87 YVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPD 146 +P A H N +IGIE G D L TDAQ + R L Y Sbjct: 123 LLPDTVFARHC--------IGLNHCAIGIENVGNDNL--TDAQLDANVQLVRYLKQRYAI 172 Query: 147 IAKNMTGHCDI-----AP----------DRKTDPGPAF 169 + + GH + P KTDPG F Sbjct: 173 --EYLIGHYEYKDFIGTPLWKETDSTYLTGKTDPGREF 208 >UniRef50_C4ZEY9 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Clostridiales RepID=C4ZEY9_EUBR3 Length = 248 Score = 82.6 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 28/159 (17%) Query: 12 RRVPSPHYDCRPDD--ETPTLLVVHNISLP--PGEFGGPWIDALFTGTIDPQAHPFFAEI 67 ++ +P+ RP E +VVH + P + + L AE Sbjct: 79 VQLLTPNPYSRPQKALEKVNGIVVHYTANPGTSARQNRDYFNGL-------------AET 125 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YT 126 + S+H +I +GEIVQ +P ++ ++ N +I IE D + Sbjct: 126 KKTKASSHFVIGLEGEIVQCIPCNEISY--------ASNNRNSDTISIECCIEDETGKFN 177 Query: 127 DAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 D+ YQ L +T L+ Y A ++ H D+ K P Sbjct: 178 DSTYQSLIELTTWLMGRYDLSADDVIRHYDVTG--KKCP 214 >UniRef50_UPI0001BC309D N-acetylmuramoyl-L-alanine amidase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC309D Length = 221 Score = 82.2 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 59/152 (38%), Gaps = 31/152 (20%) Query: 21 CRPDDET--PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR---VSAH 75 RP D+ T +VVH + P GT Q +F +A L+ S+H Sbjct: 73 SRPGDKVSKVTAIVVHYVGNP--------------GTTAEQNRSYFNNLAELKNAYASSH 118 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLA 134 ++ GEI+Q VP D+ A+ N +I IE D +TD Y L Sbjct: 119 YVVGLQGEIIQCVPLDEIAY--------ASNNRNYDTISIECCHQDAEGRFTDDTYNSLV 170 Query: 135 AVTRALIDCYPDIAK-NMTGHCDIAPDRKTDP 165 + AL Y + ++ H D+ K P Sbjct: 171 RLVAALCRTYGLNPETDVIRHYDVTG--KLCP 200 >UniRef50_B8HSE7 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Cyanobacteria RepID=B8HSE7_CYAP4 Length = 305 Score = 81.8 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 60/181 (33%), Gaps = 43/181 (23%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL----RVS 73 +Y R + VH+ + L D + H +VS Sbjct: 116 NYGNRMQRD------VHH-----RRVNNELLVVLHETVGDAHGAISTFQTPHYDDDNQVS 164 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE-------------RCNDFSIGIELE-- 118 H +I R+G ++ VP +KRA+ AG S++ G N+F+ I LE Sbjct: 165 YHAVISRNGTVIYLVPANKRAYGAGNSEFIGINGVEAVQTNPSLASSVNNFAYHISLETP 224 Query: 119 -------GTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP-DRKTDPGPA-F 169 + YT QYQ LA + +T H I + DP F Sbjct: 225 VDGLLDDHPEHSGYTQKQYQSLAWLI----ARTGVATSRITTHAAIDREGARQDPRSFSF 280 Query: 170 D 170 Sbjct: 281 P 281 >UniRef50_UPI0001C1705F AmpD n=2 Tax=Nostocaceae RepID=UPI0001C1705F Length = 285 Score = 81.8 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 75/207 (36%), Gaps = 54/207 (26%) Query: 5 QGWLVGARRVPSPHYDCR----PDDETPT---LLVVHNISLPPGEFGGPWIDALFTGTID 57 Q L A+ PS +Y R + ++V+H + I+ +D Sbjct: 86 QPKLAAAQVHPS-NYGERFSRDTKGMAVSNQPIIVLHETTYSAR----SAINYFQNHNVD 140 Query: 58 PQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE----------- 106 ++ S H +I RDG ++ VP DKRA+ AG S ++ + Sbjct: 141 ----------EDIQASYHAIIARDGTVIYLVPPDKRAFGAGNSVFKNTDGTIETVQTNPK 190 Query: 107 ---RCNDFSIGIELEGT----------DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTG 153 N+F+ + LE + YT QY LA + +T Sbjct: 191 LAPSVNNFAYHVSLETPPDGWGKRDIREHSGYTQEQYNSLAWLI----AQSQVPDNRITT 246 Query: 154 H--CDIAPDRKTDPGPAFDWARFRVLV 178 H D+A K DP +FD+ RF + Sbjct: 247 HRAVDVANG-KVDP-LSFDFDRFFKKL 271 >UniRef50_A4TAY9 Peptidoglycan-binding domain 1 protein n=5 Tax=root RepID=A4TAY9_MYCGI Length = 288 Score = 81.8 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 44/120 (36%), Gaps = 14/120 (11%) Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQ--YQGRERCNDFSIGIELEGTDTLA------- 124 + I RDG + V AWHAGV + N +IGIE + T Sbjct: 72 SQLHIARDGTVT--VVAAGVAWHAGVGMYPWLPANMGNWHTIGIECANSGTSPTAPHRRN 129 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP--DRKTDPGPAFDWARFRVLVSKET 182 + DAQY L A+ A GH + A K DPG D R R V+ Sbjct: 130 WPDAQYAALIGCCAAICRRLGVPATRTIGHKEYAGRAQGKWDPG-GIDMDRLRRDVAARI 188 >UniRef50_B4WRE3 N-acetylmuramoyl-L-alanine amidase domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRE3_9SYNE Length = 303 Score = 81.0 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 66/203 (32%), Gaps = 50/203 (24%) Query: 9 VGARRVPSP-HYDCR----PDDETPT---LLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 ++ P +Y R + + ++V+H + D Sbjct: 111 KEVLQLADPSNYGERFTVDVNGTPVSNDFIVVLHET-VGSASSALNLFARHHPRDED--- 166 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR-------------ER 107 +VS H LI DG I VP ++RA+ AG S ++ Sbjct: 167 ----------QVSYHSLISLDGTIYYVVPPEQRAFGAGNSSFRTTAGEETVTTNPGFPSS 216 Query: 108 CNDFSIGIELE---------GTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIA 158 N+F+ I LE + YT+AQYQ LA + +T H + Sbjct: 217 VNNFAYHISLETPPDGQNNSYSKHSGYTEAQYQSLAWLL----ARTTVPDYRITTHKAVD 272 Query: 159 P-DRKTDPGPAFDWARFRVLVSK 180 ++DP R L+ + Sbjct: 273 RSGSRSDPRSYDP-TRLYALLHQ 294 >UniRef50_Q9ZX49 Gp29 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZX49_BPMT4 Length = 547 Score = 80.6 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 17/144 (11%) Query: 51 LFTGTID-PQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG--RER 107 TG+ + P + F L + + + R+G + + AWHAGV Y G + Sbjct: 226 HHTGSDNTPSSEIAF--HPSLGLCSQIHLARNGTVT--LCGVGIAWHAGVGSYPGLPEDN 281 Query: 108 CNDFSIGIELEGTDTLA-------YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP- 159 N +IGIE + + T + DAQY A+ A ++ H + A Sbjct: 282 ANAVTIGIEAQNSGTYDGAPHRTNWPDAQYDAYVKCCAAICRRLGVRADHVISHKEWAGR 341 Query: 160 -DRKTDPGPAFDWARFRVLVSKET 182 K DPG D FR V + Sbjct: 342 KQGKWDPGAI-DMNIFRADVQRRI 364 >UniRef50_B0C6S0 N-acetyl-anhydromuramyl-L-alanine amidase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C6S0_ACAM1 Length = 298 Score = 80.3 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 72/192 (37%), Gaps = 48/192 (25%) Query: 18 HYDCR----PDDETPT---LLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 +Y R ++ L+V+H G I T HP + Sbjct: 121 NYGERFAKNVQGQSVQNNWLIVLHET----VGSGMSAIRHFQT------PHPRDED---- 166 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE-------------RCNDFSIGI-- 115 + S H LI DG IV VP + RA+ AG S + G N+F+ I Sbjct: 167 QASYHALIFLDGTIVYLVPPEHRAFGAGNSVFIGANGPEAVKTNPDLPASVNNFAYHIAL 226 Query: 116 ------ELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP-DRKTDPGPA 168 G Y+++QYQ LA + ++ +T H + ++DP + Sbjct: 227 ETPPDGNHNGPSHGGYSESQYQSLAWLI----ARTGVPSQRITTHAKVDRSGERSDP-RS 281 Query: 169 FDWARFRVLVSK 180 FD+++F ++ + Sbjct: 282 FDFSKFNTMLQQ 293 >UniRef50_B2SIS3 N-acetylmuramoyl-L-alanine amidase, putative n=20 Tax=Xanthomonadaceae RepID=B2SIS3_XANOP Length = 191 Score = 80.3 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 70/207 (33%), Gaps = 60/207 (28%) Query: 14 VPSP-------HYDCR---PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 +PSP Y+ R ++V+H LP + + + + Sbjct: 6 LPSPPITYAPLSYESRLTTRALTQIDMVVIHCTELPDMAMAREYGERVLYDSGTGN---- 61 Query: 64 FAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD-- 121 S H + R+G I QYV ++ A H N ++GIEL Sbjct: 62 ---------SGHYYLDRNGSIQQYVALERVAHH--------VRGHNLHTLGIELVNRGRY 104 Query: 122 -----------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGH----------CDIAP- 159 T Y +AQ L ++ + L P + + + GH D AP Sbjct: 105 PHWLDSRHQEMTEPYPEAQIAALISLLQWLQQQLPSVRR-IAGHQALDTTQEAASD-APE 162 Query: 160 ---DRKTDPGPAFDWARFRVLVSKETT 183 RK DPGP F W R VS T Sbjct: 163 RNIQRKLDPGPLFPWPRIEAAVSWSHT 189 >UniRef50_A5Z412 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z412_9FIRM Length = 343 Score = 79.9 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 51/166 (30%), Gaps = 29/166 (17%) Query: 25 DETPTLLVVHNISLPPGEFGGPWIDALFTGTID-PQAHPFFAEIAHLRVSAHCLIRRDGE 83 + +V+H + D +A+ + A SAH + D E Sbjct: 35 SRSVAYVVMHYTG----------------NSKDTAKANANYFGGAGRNASAHFFVD-DAE 77 Query: 84 IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE-LEGTDTLAYTDAQYQQLAAVTRALID 142 I Q V AWH G Y+ N SIGIE +D + A + L Sbjct: 78 IYQSVELRDTAWHCGAKSYKHGSCRNANSIGIEMCCTAGNYRISDRTKENAAYLCAFLCK 137 Query: 143 CYPDIA----KNMTGHCDIAPDRKTDPGPAF----DWARFRVLVSK 180 A + H D+ K P +W F+ V Sbjct: 138 MLGIGAGGVDSYVLRHYDVTG--KNCPAQMVSNPTEWQEFKNKVKG 181 >UniRef50_Q609E7 N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q609E7_METCA Length = 617 Score = 79.9 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 55/166 (33%), Gaps = 30/166 (18%) Query: 14 VPSPHYDCRPDDETPTLLVVH-NISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 P+ ++ P +V+H SL E FA Sbjct: 8 CPATNFTQGRRGLKPLAVVIHAYPSLETAE-------------------TVFANPRSSE- 47 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGV------SQYQGRERCNDFSIGIELEGTDTLAYT 126 S H LI G I QYV A+HAG+ Y+ N +IG+ ++ Sbjct: 48 SCHYLIAAGGRIRQYVDETDTAYHAGLVINPSWGLYRRGINPNLMTIGVAAAVGPGEHWS 107 Query: 127 DAQYQQLAAVTRALI--DCYPDIAKNMTGHCDIAPDRKTDPGPAFD 170 Y A + + +P A+++ H +I R G F+ Sbjct: 108 GEMYDAAAELIGEIAAYWGFPPDAEHIVLHAEIRASR-DCTGRGFE 152 >UniRef50_D2RJL3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJL3_ACIFE Length = 242 Score = 79.5 bits (195), Expect = 5e-14, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 63/181 (34%), Gaps = 36/181 (19%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 HY + P +VVH + + + F +P L V++H L Sbjct: 76 HYGREMETIVPQAVVVHWTASDSRDG----VYRYFYNEENPH-----LRNGTLNVASHFL 126 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAA 135 + RDG I Q P HA N +IGIE G T AQ + Sbjct: 127 VDRDGTIWQLTPETALNRHA--------IGLNWCAIGIENVGGVDGREDLTRAQLEANVN 178 Query: 136 VTRALIDCYPDIAKNMTGHCDIAPDR---------------KTDPGPAFDWARFRVLVSK 180 + R L YP I + + GH R KTDPGP F A + ++ Sbjct: 179 LIRYLRGKYPTI-QWVLGHYQQDQARHTSLWKENVPGYYHGKTDPGPRF-MAGLKEQLAG 236 Query: 181 E 181 E Sbjct: 237 E 237 >UniRef50_UPI0001BCD943 Peptidoglycan-binding domain 1 protein n=2 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD943 Length = 288 Score = 79.1 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 62/180 (34%), Gaps = 12/180 (6%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLP-PGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 VP ++ RP +P + H+ + + G + E+ Sbjct: 16 VVEVPGWKHEGRPGTFSPRGVAAHHTADTLSDHYSGAELTRREEDYARIGLSTGHRELPG 75 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQ----YQGRERCNDFSIGIELEGTDTLAY 125 + RDG + V RA HAG + + N +IGIE + + Sbjct: 76 PL--CQIGLGRDGTVY--VIAAGRANHAGKVRSWGGWVSAGDGNTQAIGIEAMNSAYEGW 131 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP---GPAFDWARFRVLVSKET 182 +D Q + + AL D Y + H +I+ K DP G D FR V+ T Sbjct: 132 SDTQSRAYHRLCAALCDHYGWPRSRVAAHGEISTSGKWDPGVNGRLIDMNAFRAAVAGVT 191 >UniRef50_A9B2D0 Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2D0_HERA2 Length = 186 Score = 79.1 bits (194), Expect = 7e-14, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 57/175 (32%), Gaps = 36/175 (20%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 H+ P +++H+ T T +P RVSAH L Sbjct: 28 HFTVGRAGYQPLQILLHHTGGTNS-------LLWLTRTSNP------------RVSAHRL 68 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGR-----------ERCNDFSIGIELEGTDT--LA 124 I + G + V + A+ AG N+ ++ IE+E Sbjct: 69 ISKSGMNHKLVKDEDTAYCAGFGTIGPVDPDGSDPVGVPRNLNECTLNIEIENRGNGVDP 128 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 Y Q +A R Y + + GH + RK DP F+WA L+ Sbjct: 129 YPLPQMTMVAWQIREWWGKYGFLP--VLGHGHVD-ARKDDP-AGFNWALLHGLLR 179 >UniRef50_C1MT36 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MT36_9CHLO Length = 267 Score = 79.1 bits (194), Expect = 7e-14, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 59/214 (27%), Gaps = 87/214 (40%) Query: 27 TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ 86 +V+H A F +S H LI DG I Q Sbjct: 71 AIDKVVIHY------------------DACGSSAKCFDVLHNQRGLSCHFLIDVDGTIYQ 112 Query: 87 YVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------------------------- 121 + +RAWHA ND S+G+EL Sbjct: 113 TLDARERAWHA--------TTANDSSVGVELAHRGAVEMPKASAEDGTSTDATNSEHPHR 164 Query: 122 -----------TLAYTDAQYQQLAAVTRALIDC-------YPDIA--------------- 148 + DAQY LAA+ ++ YP Sbjct: 165 VVGFVHGRELSQAPFADAQYASLAALVAGVMRACPRVRCEYPRGTDGEAATTKLEDDALR 224 Query: 149 --KNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 + + GH + K DPGPAFDW V K Sbjct: 225 AFRGVLGHFHVQ-TNKIDPGPAFDWEGVAARVRK 257 >UniRef50_B5CSL4 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B5CSL4_9FIRM Length = 258 Score = 78.3 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 34/170 (20%) Query: 21 CRPDDETPTL--LVVHNISLP--PGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 RP + +V+H + P + + + L + S++ Sbjct: 109 SRPGTTIDEIHGIVIHYTANPGSTAQENRDYFNGL-------------KDSHETEASSNF 155 Query: 77 LIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLAA 135 ++ +GEI+Q VP + A+ N ++ IE D +T YQ + Sbjct: 156 VVGLEGEIIQCVPTWEMAY--------ASNERNADTVSIECCHPDETGKFTKETYQSMVQ 207 Query: 136 VTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-----DWARFRVLVSK 180 +T L Y + H D+ K P F W +F+ + K Sbjct: 208 LTAWLCKKYNLNEDQVIRHYDVTG--KICP-KYFVEDEAAWKQFKNNIRK 254 >UniRef50_C4V1H2 Putative uncharacterized protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1H2_9FIRM Length = 219 Score = 78.3 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 63/181 (34%), Gaps = 39/181 (21%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 HY D P +VVH + E + A+ + +AH L Sbjct: 54 HYGMPMDTIIPQAVVVHWTAGDTWESAY------------WHFYAAAAQDGTMNYAAHFL 101 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAA 135 + RDG I + +P A H N SIGIE G T+ Q AA Sbjct: 102 VDRDGTIFRLLPETAMARH--------IIGYNWCSIGIENVGGVGGVEDLTEEQLAANAA 153 Query: 136 VTRALIDCYPDIAKNMTGHCD-------------IAPDR--KTDPGPAFDWARFRVLVSK 180 + R L YP IA + GH +A R K+DPGP F R + Sbjct: 154 LIRYLHAKYPTIAY-VFGHYQQDTARDSGLYIEHVAGYRSIKSDPGPQF-MGALRRCLEG 211 Query: 181 E 181 + Sbjct: 212 D 212 >UniRef50_Q04T28 Amidase n=4 Tax=Leptospira RepID=Q04T28_LEPBJ Length = 188 Score = 78.3 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 64/177 (36%), Gaps = 28/177 (15%) Query: 17 PHYDCRPDDETPTL--LVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 P+ RP D+ + +V+H +LP I F SA Sbjct: 15 PNPHSRPGDKIKEVKGIVLHWTALPNA--TAQNIRDYFE---------SLKAPEGRFASA 63 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQY-------QGRERCNDFSIGIE-LEGTDTLAYT 126 H + GEIVQ +P D+ A+H G Y G + N ++IGIE T +T Sbjct: 64 HFAVGLVGEIVQCIPLDEIAYHCGSRTYTSEKEKRLGPDSPNFYTIGIEQCVQDMTGKFT 123 Query: 127 DAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPG-----PAFDWARFRVLV 178 + A +T L Y ++ H I K P P DW F+ V Sbjct: 124 EKTLDSAARLTAQLCLKYNLDVNDLWTHQGI-VGWKDCPRWYNTHPK-DWIGFKKRV 178 >UniRef50_B8HPP1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HPP1_CYAP4 Length = 288 Score = 77.9 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 66/191 (34%), Gaps = 50/191 (26%) Query: 18 HYDCR--------PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 ++ R P P L+V+H G I + D Sbjct: 89 NFGPRFSQDVYGRPVRNAP-LVVLHET----VGSGSSAIQMFRSPQPD----------ES 133 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE-------------RCNDFSIGIE 116 + S H LI RDG IV VP RA+ AG S ++G N+F+ I Sbjct: 134 RQASYHALILRDGTIVYLVPGTMRAFGAGNSIFRGANGPEAVKTHPRFPASVNNFAYHIS 193 Query: 117 LEGTDT--------LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP-DRKTDPGP 167 LE YT QYQ LA +T + +T H + + DP Sbjct: 194 LETPPNGNNNASRHSGYTPNQYQSLAVLTACT----RVPSDRITTHKAVDRSGSRMDP-R 248 Query: 168 AFDWARFRVLV 178 +FD FR L+ Sbjct: 249 SFDDRLFRRLL 259 >UniRef50_B5LGB7 Amidase n=10 Tax=unclassified Siphoviridae RepID=B5LGB7_9CAUD Length = 287 Score = 77.6 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 67/209 (32%), Gaps = 64/209 (30%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNI----SLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 R +P+ H+ + +V+H P G + +FA Sbjct: 2 RYIPAAHHSA-GSNSPVNRVVIHATCPDVGFPSASRKGRAV----------STANYFASP 50 Query: 68 AHLRVSAHCL--IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT--- 122 + SAH + IR E VQ + WHA N S+GIE+ Sbjct: 51 SSGG-SAHYVCDIR---ETVQCLSESTIGWHA---------PPNPHSLGIEICADGGSHA 97 Query: 123 ------LAYTDAQ---------YQQLAAVTRALIDCYPDIAK------------NMTGHC 155 AYT Q ++ A + R L D Y + + GH Sbjct: 98 SFRVPGHAYTREQWLDPRVWPAVERAAVLCRQLCDKYNVPKRKLSAADLKAGKRGVCGHV 157 Query: 156 DIAPD----RKTDPGPAFDWARFRVLVSK 180 D+ DPGP F W RF +V+ Sbjct: 158 DVTDAWHQSDHDDPGPWFPWDRFMAVVNG 186 >UniRef50_C0Z5F5 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z5F5_BREBN Length = 278 Score = 77.6 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 24/155 (15%) Query: 18 HYDCRPDDE-TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 + + RP + P +V+H + E G + A+ + SAH Sbjct: 10 NVNSRPKKKIVPKGVVIHWTA---NERSGA----------NATANRNYFNKPTTVASAHY 56 Query: 77 LIRRDGEIVQYVPFDKRAWHAGVSQYQGR------ERCNDFSIGIELEGTDTLAYTDAQY 130 ++ D +I++ +P D+ +H G Y N+ +IGIE+ ++ Y Sbjct: 57 IVD-DKQIIRCLPEDEMGYHVGAQTYSQAALNKLSNYPNNCTIGIEMCVNADGSF-AKMY 114 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 +Q A+T ++ + +++ H DI K P Sbjct: 115 EQTVALTADILKRHGWGVEHLWRHYDITG--KNCP 147 >UniRef50_B0G3S2 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G3S2_9FIRM Length = 254 Score = 77.2 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 64/174 (36%), Gaps = 30/174 (17%) Query: 17 PHYDCRPDDETPTL--LVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 P+ R ++T + +V+H + P G F G D + S+ Sbjct: 96 PNPYSRSQEKTDKITGIVIHYTANPGATAIGN--RNYFEGLKDS---------HETKASS 144 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQL 133 + ++ +GEIVQ +P + A+ N ++ IE D + DA Y+ + Sbjct: 145 NFVVGLNGEIVQCIPTWEVAY--------ASNDRNYDTVSIECCHPDATGKFNDATYRSM 196 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-----DWARFRVLVSKET 182 +T L + +++ H D+ K P F W +FR V Sbjct: 197 VQLTAWLCLKFNLTEEDVIRHYDVTG--KICP-KYFVENEGAWDQFRKDVKSAM 247 >UniRef50_A8PNB6 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Rickettsiella grylli RepID=A8PNB6_9COXI Length = 406 Score = 76.8 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 33/112 (29%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 ++D R +V+H + + +SAH L Sbjct: 12 NFDKRQ-----RFIVLHYTAF--------------------DEKDSLETLTRGGLSAHFL 46 Query: 78 IRRDG--------EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 + + + + V + RAWHAG S ++GRE ND SIGIE+ Sbjct: 47 VPKQPFKVDEESYDYYKLVDINDRAWHAGCSHFKGRESLNDNSIGIEIVNYG 98 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 14/66 (21%) Query: 122 TLAYTDAQYQQLAAVTR-------ALIDC------YPDIAKNMTGHCDIAPDRKTDPGPA 168 YTD QY L + A+ID Y + + GH D+AP RK DPGP Sbjct: 208 WDDYTDHQYDTLVKLIEENIKPAMAIIDEESEHSYYQIPPQFILGHSDVAPGRKIDPGPR 267 Query: 169 FDWARF 174 W + Sbjct: 268 L-WKKL 272 >UniRef50_B5LLI8 Gp242 n=8 Tax=unclassified Myoviridae RepID=B5LLI8_9CAUD Length = 476 Score = 76.8 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 16/152 (10%) Query: 41 GEFGGPW-IDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGV 99 G+FG W + A TG+ + A+ L +++ + R+GE + AWHAG Sbjct: 204 GDFGEIWGVVAHHTGSF-GETPKGIAQHPSLGLASQLYLGRNGE--YTLCGVGIAWHAGQ 260 Query: 100 SQYQG--RERCNDFSIGIELEGTD-------TLAYTDAQYQQLAAVTRALIDCYPDIAKN 150 Y G N +IGIE A++D QY A++ + Sbjct: 261 GSYPGLPTNDANRLTIGIEAANDGGGSPPGKRDAWSDVQYNAYVRGVAAILRKLGRDSSR 320 Query: 151 MTGHCDIAPD--RKTDPGPAFDWARFRVLVSK 180 + GH + A K DPG D FR V++ Sbjct: 321 VIGHKEWAGTAQGKWDPG-GIDMNTFRADVAR 351 >UniRef50_C5RQQ9 N-acetylmuramoyl-L-alanine amidase family 2 n=3 Tax=Clostridium cellulovorans 743B RepID=C5RQQ9_CLOCL Length = 304 Score = 76.8 bits (188), Expect = 4e-13, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 27/160 (16%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +++ + +V H + +A + G+ D +A SAH Sbjct: 10 NFNY-SEGNNIKFIVCHFTG---NDNDTAKNNADYFGSCDREA------------SAHYF 53 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQ-YQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAV 136 + + EI Q V +WH G G N SI IE+ G ++ + + Sbjct: 54 VDNN-EIRQVVEEYNASWHCGDGNGAYGITNYN--SISIEMCG-ANGDISETTAKNARNL 109 Query: 137 TRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF---DWAR 173 R L+ Y +N+ H D + RK P P F +WAR Sbjct: 110 IRLLMKKYGVQIENVVRHYDAS--RKNCPSP-FSSNNWAR 146 >UniRef50_UPI00019739B2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019739B2 Length = 248 Score = 76.4 bits (187), Expect = 4e-13, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 31/172 (18%) Query: 21 CRPDDETPTL--LVVHNISLP--PGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 RP + ++ +VVH + P E + + L T + + VS++ Sbjct: 95 SRPGTKLCSVNGIVVHYVGNPGTTAEQNRNYFEGLKAQTGENKVS----------VSSNF 144 Query: 77 LIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLAA 135 +I DGEI+Q VP D+ A+ N +I IE + +T+ Y L Sbjct: 145 IIGMDGEIIQCVPIDEMAY--------ASNSRNSDTISIECCHPEADGRFTEETYDSLVR 196 Query: 136 VTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-----DWARFRVLVSKET 182 +T L K++ H D+ K P F +W F V K Sbjct: 197 LTAWLCSELKLKPKDVIRHYDV--TEKACP-KYFVDHPQEWETFLKDVKKAM 245 >UniRef50_C7MM46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MM46_CRYCD Length = 339 Score = 76.0 bits (186), Expect = 5e-13, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 31/178 (17%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 S +Y P + VH S + ++ +A+ + S Sbjct: 9 AHSGNYT--PGGNRCEYIAVHYTS----------------NSAPARSEASYAQNSQHSSS 50 Query: 74 AHCLIRRDG-EIVQYVPFDKRAWHAGVSQYQGRERC--NDFSIGIELEGTDTLAYTDAQY 130 H ++ DG E Q + AW G + G + N +I IE+ +++DA+ Sbjct: 51 YHYVL--DGYECYQLLNDTDTAWAVG--TWPGYTQLISNRQAISIEVCNAGG-SFSDAER 105 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP-----GPAFDWARFRVLVSKETT 183 QL + L++ + A ++ H D RK P + +W+ ++ T Sbjct: 106 DQLRELVALLMERHSIDADHVVRHWDCHTGRKECPEYYAGAKSNEWSELHDYITGGGT 163 >UniRef50_B1ABI9 Putative uncharacterized protein n=1 Tax=Lactococcus phage asccphi28 RepID=B1ABI9_9CAUD Length = 330 Score = 76.0 bits (186), Expect = 5e-13, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLP-PGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 S H+ + ++V+H+ WI+ Sbjct: 13 EWQSSGHFG-GITRKPIDMIVLHHNGGTGSNVVPNCWIER-------------------- 51 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG----TDTLAYT 126 SAH I +G+I+ + D AWH G N +IGIE + D L Sbjct: 52 EASAHYQI-ENGQIINCLDEDITAWHCGAYGVDN----NSHTIGIEHQNSTGAPDWLVSN 106 Query: 127 DAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIA 158 + Q ++ A + + Y P ++ H ++ Sbjct: 107 ENQ-EKSAQLVADIAKRYGIPLDRNHIVRHREMP 139 >UniRef50_B2J1Q9 N-acetylmuramoyl-L-alanine amidase, family 2 n=4 Tax=Nostocaceae RepID=B2J1Q9_NOSP7 Length = 292 Score = 76.0 bits (186), Expect = 5e-13, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 71/197 (36%), Gaps = 53/197 (26%) Query: 15 PSPHYDCR--------PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAE 66 PS +Y R P + P ++V+H + + Sbjct: 104 PS-NYGERYAQDANGVPLNNQP-IIVLHETGY-SASSAINFFQVAHSD------------ 148 Query: 67 IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE-------------RCNDFSI 113 ++ S H LI+ DG +V VP +KRA+ A S ++ + N+F+ Sbjct: 149 -EGVQASYHALIKLDGTVVYLVPPEKRAFGAANSVFESPQGLETVQTNPKLPASVNNFAY 207 Query: 114 GIELEGT----------DTLAYTDAQYQQLAAVTRAL-IDCYPDIAKNMTGHCDIAPDRK 162 + LE YT+AQY+ LA + + Y ++ +K Sbjct: 208 HVSLETPPDSYDSNSQQTHSGYTEAQYKSLAWLVAQSQVPDYRITTHHLVDRS----GKK 263 Query: 163 TDPGPAFDWARFRVLVS 179 DP FD ++F L++ Sbjct: 264 VDP-INFDGSKFLNLLN 279 >UniRef50_C2BV37 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Mobiluncus RepID=C2BV37_9ACTO Length = 271 Score = 76.0 bits (186), Expect = 6e-13, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 49/145 (33%), Gaps = 30/145 (20%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 H+ + +++H+ G + Q P SAH Sbjct: 18 HFTKGRQGRSINKIILHHNDGNLSIQGCWNV---------WQTRP---------ASAHYQ 59 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY--TDAQYQQLAA 135 + G I Q V AWHAG N SIGIE T Y +DA + A Sbjct: 60 VETSGRIGQLVWDRDTAWHAGNWVA------NTTSIGIEHADASTHPYRISDACLENGAH 113 Query: 136 VTRALIDCY----PDIAKNMTGHCD 156 + AL Y P KN+ GH D Sbjct: 114 LVAALCHYYKLGRPVWGKNVFGHRD 138 >UniRef50_A1UKT0 Peptidoglycan-binding domain 1 protein n=3 Tax=Mycobacterium RepID=A1UKT0_MYCSK Length = 232 Score = 75.6 bits (185), Expect = 7e-13, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 43/120 (35%), Gaps = 14/120 (11%) Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQ--YQGRERCNDFSIGIELEGTDTLA------- 124 + I RDG + V AWHAG + + N +IGIE T T Sbjct: 48 SQLHIARDGTVT--VVAAGVAWHAGAGRYRWLPANTGNRHTIGIECANTGTGPTAPHRTN 105 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPD--RKTDPGPAFDWARFRVLVSKET 182 + DAQY L A++ A GH + A K DPG D R + Sbjct: 106 WPDAQYLALVRCCAAIMRRLGFGAARTIGHREYAGGVQGKWDPGAI-DLDTLRADIQARI 164 >UniRef50_B0MAX7 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAX7_9FIRM Length = 246 Score = 75.2 bits (184), Expect = 8e-13, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 36/181 (19%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQ-AHPFFAEIAHLRVSAHC 76 +Y + + +VVH + D + + + A SAH Sbjct: 14 NYGGKRSTKDIDYIVVHYTG----------------NSKDTALNNCKYFQGASKGASAHY 57 Query: 77 LIRRDGEIVQYVPFDKRAWHAG--------VSQYQGRERCNDFSIGIELEGTDTLAYTDA 128 + + + V ++ AW G Y ++ N S+ +E+ A Sbjct: 58 FVDGGKYVYKSVAVNRVAWAVGGCYSTVGAAGNY-YKKCTNANSLSVEMCNVTRK--VPA 114 Query: 129 QYQ-QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-----DWARFRVLVSKET 182 + Q + + L+ Y A ++ H D+ + K P P W F+ + ++ Sbjct: 115 NVRDQTIELVKFLMQKYGVPASHVIRHWDV--NGKNCPMPWIGADNNGWKTFKNAIGGQS 172 Query: 183 T 183 Sbjct: 173 V 173 >UniRef50_C7N6M2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6M2_SLAHD Length = 268 Score = 75.2 bits (184), Expect = 8e-13, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 56/156 (35%), Gaps = 20/156 (12%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 + S + R +VVH +F+ + Sbjct: 7 KHHGSYNIQPRSAS-AVKYIVVHYTGSGTSAAPAAL-----------NNCQYFSG-GDRQ 53 Query: 72 VSAHCLIRRDGEIVQYVPFDK-RAWHAGVSQYQGRERC-NDFSIGIELEGTDTLAYTDAQ 129 SAH I D I +Y + WH G +G+ N SIGIE+ +T+A+ Sbjct: 54 ASAHYFID-DETIYEYADPSRHLTWHVGDG--RGKYGITNTNSIGIEVCQDGDRPFTEAE 110 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 ++L + R L+D Y A + H D + RK P Sbjct: 111 TKRLQWLVRRLMDEYGVPADRVVRHYDAS--RKLCP 144 >UniRef50_C8RU72 Prophage LambdaSa2, lysin n=1 Tax=Corynebacterium jeikeium ATCC 43734 RepID=C8RU72_CORJE Length = 280 Score = 75.2 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 48/143 (33%), Gaps = 30/143 (20%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 HY +++H+ G I ++ + SAH Sbjct: 18 HYSAGRSGRKINKVIIHH---NAGNLTIKSIWDVWQTR---------------QASAHYQ 59 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY--TDAQYQQLAA 135 + +G I Q V AWHAG N SIGIE + + ++A A Sbjct: 60 VDSNGRIGQLVWDRDTAWHAGNW------DANTTSIGIEHADISSKPWRISEACLDNGAH 113 Query: 136 VTRALIDCY----PDIAKNMTGH 154 + A+ Y P KN+ GH Sbjct: 114 LVAAICHYYKLGRPVWGKNVFGH 136 >UniRef50_B4AHH5 N-acetylmuramoyl-L-alanine amidase XlyB (Cellwall hydrolase) (Autolysin) n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AHH5_BACPU Length = 267 Score = 74.9 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 24/173 (13%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 +P + + + P + VHN S +H F + V Sbjct: 8 YIPKHNRNRPGNTMKPLYITVHNTSNTAKGANAG-------------SHAAFVARSSTGV 54 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL-EGTDTLAYTDAQYQ 131 S H + D I Q++P ++ WH G GR N SIGIE+ E TD + A + Sbjct: 55 SWHYTVD-DQVIYQHLPLNENGWHTG----DGRGNGNMKSIGIEICENTDGN-FEQA-VE 107 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-DWARFRVLVSKETT 183 + R L+ N+ H + K P W +F+ ++ T Sbjct: 108 NAQWLIRKLMGDLGIPLSNVVPHKHWSG--KECPRKLLGRWDQFKAGIATART 158 >UniRef50_C8VXP6 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Peptococcaceae RepID=C8VXP6_DESAS Length = 208 Score = 74.9 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 57/163 (34%), Gaps = 22/163 (13%) Query: 22 RPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR 80 RP TP + VHN D AH F + ++ H + Sbjct: 16 RPGNPMTPKYITVHNTGNTAKG-------------ADALAHAAFLKNSNDSTGWHFTVD- 61 Query: 81 DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRAL 140 D IVQ++P + AWHA G N SIGIE+ Y A+ + + R L Sbjct: 62 DKRIVQHIPCWENAWHATDGHGPG----NVSSIGIEICVNSDGDYEKAEANAI-ELIRYL 116 Query: 141 IDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-WARFRVLVSKET 182 +D Y N+ H P K P W F + + Sbjct: 117 MDKYKIPLTNIVPHQKWYPA-KYCPYKILPRWNEFISEIKQPD 158 >UniRef50_A5GSJ2 Putative uncharacterized protein SynRCC307_0948 n=1 Tax=Synechococcus sp. RCC307 RepID=A5GSJ2_SYNR3 Length = 294 Score = 74.9 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 67/197 (34%), Gaps = 49/197 (24%) Query: 12 RRVPSP----HYDCRPD--------DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQ 59 R P+P ++ R P+++V+H + G+ + D Sbjct: 86 RERPTPADPTNFGERRPTDAEGGLVPNQPSVIVLHETVMSLGD-TLRFFQTPHPRDAD-- 142 Query: 60 AHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE------------- 106 + S H L+ R G + VP KRA+ +G S + Sbjct: 143 -----------QASYHLLLDRRGMAYRLVPDAKRAFGSGWSAWGDGSIRHRPLSSPLAGG 191 Query: 107 RCNDFSIGIELEGT--------DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIA 158 N+ ++ + LE Y+ AQY++LA + + +T H + Sbjct: 192 SINNVALHLSLESPADGRGDDDAHSGYSRAQYERLAEHVLIWQLRWGIPMRRITTHAAVD 251 Query: 159 PDR-KTDPGPAFDWARF 174 + DP +F W RF Sbjct: 252 RSHSRRDP-RSFRWERF 267 >UniRef50_B1V3W0 N-acetylmuramoyl-L-alanine amidase, family 2 n=8 Tax=Clostridium perfringens RepID=B1V3W0_CLOPE Length = 553 Score = 74.9 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 24/170 (14%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +Y P +V+H+ +FA + + SAH + Sbjct: 81 NYSQ-GITINPKYIVIHDTDNRQAGANAMANRN------------YFANHPNAKASAHYI 127 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVT 137 I G I+Q + + WH G N +I IEL + D + +T Sbjct: 128 IDE-GNIIQALEDTWKGWHVGDGNNPNIN--NSTTIAIELCVNKGNDF-DKTLENGIELT 183 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-----WARFRVLVSKET 182 + L++ Y A+N+ H D + KT + W F+ +S Sbjct: 184 KYLMNKYDIPAENVVMHRDASG--KTCSRMMIEDRPSLWPYFKERISGGD 231 >UniRef50_C6JDZ2 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDZ2_9FIRM Length = 253 Score = 74.5 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 62/165 (37%), Gaps = 25/165 (15%) Query: 24 DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL-RVSAHCLIRRDG 82 + P +V+HN D TG D +AH + SAH + D Sbjct: 15 SGQIPRYIVIHNT------------DNYSTG-ADARAHAMAQYHGNFDGYSAHVYVD-DK 60 Query: 83 EIVQYVPFDKRAWHAGVSQYQGR---ERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRA 139 Q +P+ + AWH GV Y GR N S+GIE+ Y A A V R Sbjct: 61 SAYQAMPYSRGAWHVGV-NYGGRLFGTVNNRNSVGIEMCVQAGFDYDKAF-ANTAEVCRQ 118 Query: 140 LIDCYPDIAKNMTGHCDIAPDRKTDP---GPAFDWARFRVLVSKE 181 L+ A + H D+ K P DW RF+ L+ + Sbjct: 119 LMSELNIPADRVVQHYDVCA--KNCPSAIRAKNDWNRFKKLIQGK 161 >UniRef50_A8RYS3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RYS3_9CLOT Length = 329 Score = 74.1 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 56/148 (37%), Gaps = 20/148 (13%) Query: 21 CRP--DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 RP + +V+H ++ P F D + + S+H ++ Sbjct: 172 SRPDVGRQKVDKIVIHYVANPGSTAKNN--RDYFDSLADQD-----PQKSGSSASSHFVV 224 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLAAVT 137 +GE++Q +P ++ A+ N+ ++ IE+ D + DA Y+ L +T Sbjct: 225 GLEGEVIQCIPVNEIAY--------ANAPLNNTTVAIEVCHPDDSGKFNDATYESLVDLT 276 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDP 165 L ++ H D+ + K P Sbjct: 277 AFLCRQLKLTPGDVIRHYDV--NEKLCP 302 >UniRef50_Q026T4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026T4_SOLUE Length = 382 Score = 74.1 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 50/166 (30%), Gaps = 22/166 (13%) Query: 25 DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEI 84 P +V H F + Q R H LI R G + Sbjct: 149 RAEPAGIVYHTTESLQAPFESS------QNNVLKQVGESLISYVGRRRCYHFLIDRFGRV 202 Query: 85 VQYVPFDKRAWHAGVSQYQGRE----RCNDFSIGIELE-----GTDTLAYTDAQYQQLAA 135 + V A HAG S + ND IG+ E G D + AQ + A Sbjct: 203 FRIVNESDAADHAGHSVWADDRYLYVNLNDSFIGVSFEAQTGLGGDATSAGGAQVRSAAM 262 Query: 136 VTRALIDCYPDIAKNMTGHCDIAP-------DRKTDPGPAFDWARF 174 +T L Y A+N H ++ D +F + + Sbjct: 263 LTEMLRSRYKIPARNCVTHAQVSVNPSNMQIGYHIDWASSFPFEKL 308 >UniRef50_Q925X1 Lin2374 protein n=2 Tax=Listeria RepID=Q925X1_LISIN Length = 316 Score = 74.1 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 63/185 (34%), Gaps = 42/185 (22%) Query: 18 HYDCRPDDE--TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 + RP + + +V+H + P +F ++ SAH Sbjct: 12 NQFSRPGYKLLRVSKIVMHYTANPGASADNH--------------RRYFRDLKERYASAH 57 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGV------------SQYQGRERCNDFSIGIELEGTDTL 123 I + I +P ++ A+HA S Y+G N SIGIE+ Sbjct: 58 IFIDDNEAIC-IIPLNEVAYHANERSCKLTALQASTSYYRG-GNANLTSIGIEMCLDKNG 115 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDW-------ARFRV 176 T A + + V L Y A ++ H D+ K P P W RFR Sbjct: 116 NITAATFNRSVDVAAELCKTYDLTASDIIRHYDVTG--KNCPAP---WVAKPSELTRFRN 170 Query: 177 LVSKE 181 V+ + Sbjct: 171 AVNAK 175 >UniRef50_UPI0001693C62 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693C62 Length = 257 Score = 73.3 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 29/156 (18%) Query: 20 DCRPDDET--PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 + RP + P LV H+ P G+ +F + SAH Sbjct: 18 NTRPGSKLRGPVFLVAHDTGNP--------------GSTARNNRNYFNTMTERSASAHVF 63 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRE-------RCNDFSIGIELEGTDTLAYTDAQY 130 I D EI++ +P +++AWH +Y ND ++G+EL + + A Y Sbjct: 64 ID-DTEILEIIPLNEKAWH---VRYDVPTDKRLYGCSANDAAVGVELCYGGHIHFEKA-Y 118 Query: 131 QQLAAVTRALIDCYPD-IAKNMTGHCDIAPDRKTDP 165 ++ L + K++ H + P RK DP Sbjct: 119 RRYVWYFAYLCRKFDLNPRKHIVSHKTLDPGRKVDP 154 >UniRef50_C7N142 Negative regulator of beta-lactamase expression n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N142_SLAHD Length = 296 Score = 73.3 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 56/167 (33%), Gaps = 44/167 (26%) Query: 29 TLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYV 88 +V+H+ GE + A + G V+AH +I +DG IVQ V Sbjct: 134 KYIVLHDT---EGEGSAAGVVAYWDG-------------NGAGVAAHFIINKDGTIVQCV 177 Query: 89 PFDKRAWHAG-------------------------VSQYQGRERCNDFSIGIELEGTDTL 123 P DK HAG + + N +SIGIE+ Sbjct: 178 PLDKITHHAGFGDTGHNELYGVQDESRDDKMGTVPIGDWAADYGMNSYSIGIEMVHVGGS 237 Query: 124 A-YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF 169 Y +AQ + L + + Y + + H +D P F Sbjct: 238 GDYPEAQLEALDGLIAYIDAYYGFESA-IIDHKAWRTGN-SDTSPEF 282 >UniRef50_B0CCH2 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CCH2_ACAM1 Length = 236 Score = 73.3 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 69/182 (37%), Gaps = 44/182 (24%) Query: 22 RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRD 81 RP + P ++V+H G I T P + E + S H LI R+ Sbjct: 48 RPVNNEP-IVVLHET----VSSGASTIRFFQT--------PHYNEAE--QASYHDLIIRN 92 Query: 82 GEIVQYVPFDKRAWHAGVSQYQGRE-------------RCNDFSIGIELE--------GT 120 G IV V + RA+ AG S + G N+F+ I LE G Sbjct: 93 GTIVHIVSRENRAFGAGNSVFNGPNGPESVKTHKIYSASVNNFAYHISLETPPDGRHNGN 152 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGH--CDIAPDRKTDPGPAFDWARFRVLV 178 YT AQY+ LA L+ +T H D + R+ DP +F+ F LV Sbjct: 153 RHSGYTQAQYKSLA----YLVANSQIPLSRVTTHKGVDRSGSRR-DP-RSFNNRYFTSLV 206 Query: 179 SK 180 + Sbjct: 207 QR 208 >UniRef50_C0W4G6 Possible N-acetylmuramoyl-L-alanine amidase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W4G6_9ACTO Length = 286 Score = 73.3 bits (179), Expect = 4e-12, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 57/163 (34%), Gaps = 32/163 (19%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 SP+Y P +V+H+ + G + ++ SA Sbjct: 22 QSPNYSPGRPAGAPNQIVIHHWGV--------------DGQTHQGVVGYLCSRSNHGASA 67 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLA 134 H + G + Q V RAWHAG S N IGIE +D ++ +A Sbjct: 68 HY-VASAGRVTQLVSDRDRAWHAGPSG-------NPRGIGIEC----RPEMSDGDFETVA 115 Query: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 + A+ + D+ GH D PG + AR R L Sbjct: 116 GLVAAIRSEHGDLPLR--GHRDHMST--ACPGRWY--ARLRDL 152 >UniRef50_P54450 N-acetylmuramoyl-L-alanine amidase cwlH n=1 Tax=Bacillus subtilis RepID=CWLH_BACSU Length = 250 Score = 72.9 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 54/166 (32%), Gaps = 22/166 (13%) Query: 20 DCRPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 D RP P + VHN + D + H F + + S H + Sbjct: 14 DNRPGYAMAPAYITVHNTANTAKG-------------ADAKMHAKFVKNPNTSESWHFTV 60 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTR 138 D I Q++P D+ WHAG N SIGIE+ + A + R Sbjct: 61 D-DSVIYQHLPIDENGWHAGDG---TNGTGNRKSIGIEICENADGDFEKATSNA-QWLIR 115 Query: 139 ALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-WARFRVLVSKETT 183 L+ + H + K P D W F +S T Sbjct: 116 KLMKENNIPLNRVVPHKKWSG--KECPRKLLDHWNSFLNGISSSDT 159 >UniRef50_B9XEI5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=bacterium Ellin514 RepID=B9XEI5_9BACT Length = 369 Score = 72.9 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 79/262 (30%), Gaps = 101/262 (38%) Query: 4 EQGW---LVGARRVPSPH-YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDP- 58 + GW + + SP+ Y+ R TP + GG W + +D Sbjct: 86 KSGWEASHEEVKELQSPNRYNTRRGTLTPEQI--------EEVRGGGWPLPMLQDVVDQF 137 Query: 59 ---------QAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWH------------- 96 F H +S H ++ DG I Q + +RAWH Sbjct: 138 VLHFDVCGTSRQCFNILQDHRDLSVHFMLDVDGTIYQTLDLKERAWHATTSNNRSVGIEI 197 Query: 97 AGVSQY---------------QGRERCN-------DFSI----------------GIELE 118 A + Y +GR R D ++ G+ ++ Sbjct: 198 ANIGAYSNEEKSPLGEWYKQEKGRTRITIPESFGGDSALRTKGFVGYSARPEPVKGV-IQ 256 Query: 119 GTD--TLAYTDAQYQQLAAVTRALIDCYPDIA------------------------KNMT 152 G + YT QY+ LA +T AL +P I + Sbjct: 257 GRELTQYDYTPEQYEALAHLTAALCKIFPKITCDYPKDTSGNLITHKLSDADLKNYHGVM 316 Query: 153 GHCDIAPDRKTDPGPAFDWARF 174 GH + K DPGPA W R Sbjct: 317 GHYHVQ-TDKVDPGPALQWDRL 337 >UniRef50_C3EV93 N-acetylmuramoyl-L-alanine amidase n=11 Tax=Bacillus thuringiensis RepID=C3EV93_BACTK Length = 318 Score = 72.9 bits (178), Expect = 5e-12, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 55/153 (35%), Gaps = 26/153 (16%) Query: 22 RPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR--VSAHCLI 78 RP P + +H + D +AH + VS H + Sbjct: 26 RPAYSMNPRYITIHTTANQNAG-------------TDARAHARYVNNGGGSSSVSWHFTV 72 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL-EGTDTLAYTDAQYQQLAAVT 137 D IVQ++P ++ WHAG G N SIGIE+ E D + A A + Sbjct: 73 D-DNRIVQHLPLNENGWHAGDGNGAG----NRSSIGIEICENRDGN-FEKALTHA-AGLV 125 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD 170 + L+ N+ H + K P P F+ Sbjct: 126 KFLMAHLGLKIGNVVSHQHWSG--KNCPRPIFN 156 >UniRef50_C0F005 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F005_9FIRM Length = 254 Score = 72.6 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 26/138 (18%) Query: 31 LVVHNISLP--PGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYV 88 +V+H + P + + + L + S+H ++ DGE++Q + Sbjct: 116 VVIHYVENPGSTAKENRDYFNNLQ-------------NTHLTKASSHYIVGLDGEVIQCI 162 Query: 89 PFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLAAVTRALIDCYPDI 147 P + ++ N +I IE + D Y +T + Y Sbjct: 163 PQSEISY--------ASNNRNKDTISIECCHPKKNGKFNDKTYNSAVRLTAWICKTYGLS 214 Query: 148 AKNMTGHCDIAPDRKTDP 165 +KN+ H D+ K P Sbjct: 215 SKNVIRHYDVTG--KMCP 230 >UniRef50_A6NPI6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPI6_9BACE Length = 218 Score = 72.6 bits (177), Expect = 6e-12, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 31/170 (18%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDD--ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQ 59 + + V + +P Y RP + +VVH P GT Q Sbjct: 55 VPDAPEWVERQLLPINEY-SRPGEKLTAVNGVVVHYTGNP--------------GTTAQQ 99 Query: 60 AHPFFAEIAHLR---VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE 116 +FA +A S++ +I +GEI++ VP D+ A+ + Y ++ IE Sbjct: 100 NRSYFAGLAQSGETFASSNFVIGLEGEILECVPLDEVAYASSQRNYD--------TLSIE 151 Query: 117 -LEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 DT +T A Y L + + L+D Y + H D+ K P Sbjct: 152 VCHPDDTGEFTQASYDALVKLVQWLVDTYDLDRDQILRHYDVTG--KECP 199 >UniRef50_C1A451 Putative amidase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A451_GEMAT Length = 164 Score = 72.6 bits (177), Expect = 6e-12, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 65/167 (38%), Gaps = 32/167 (19%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 PSP++ R L VH G + +D +VS Sbjct: 6 PSPNHSAR--SHRVEALCVHWTG---GSYASA---------LDW------TRRKESQVSY 45 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVS------QYQGRERCNDFSIGIELEGTDTLAYTDA 128 H +I DGE+ VP+D+ +W G S ++ + N + I L G T A Sbjct: 46 HAIIAPDGEVALCVPWDRASWSVGASRQPDDLRFTFGSKGNGATENIALAGGPPTKPTPA 105 Query: 129 QYQQLAAVTRA--LIDCYPDIAK-NMTGHCDIA--PDRKTDP-GPAF 169 Q Q L + RA + +P + GH D+A RKTDP G A+ Sbjct: 106 QVQVLVRLLRARMIAHQWPLTETWRIVGHVDLAMPRGRKTDPTGGAW 152 >UniRef50_A7NLK9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Roseiflexus RepID=A7NLK9_ROSCS Length = 672 Score = 72.2 bits (176), Expect = 7e-12, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 18/138 (13%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 RR P T+++ H+ LP + A F A+ R Sbjct: 17 RRTAPPSASESRRGAAVTMIIFHHTPLPAEQ-----------------AIARFTARANTR 59 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQ 131 H + DG I Q V + A H+G+++ + SIG+ +EG +A AQ Sbjct: 60 AP-HYHVAADGTITQLVDEARAARHSGLAKLDRVRNIDRISIGVAIEGAPRVALPSAQVI 118 Query: 132 QLAAVTRALIDCYPDIAK 149 L +T + Y +A+ Sbjct: 119 ALRTLTLDIQHRYDLLAE 136 >UniRef50_Q31MV4 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Synechococcus elongatus RepID=Q31MV4_SYNE7 Length = 261 Score = 72.2 bits (176), Expect = 8e-12, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 70/198 (35%), Gaps = 50/198 (25%) Query: 13 RVPSPHYDCR----PDDETPT---LLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 +Y R D L+V+H + + W D +A Sbjct: 73 WAHPNNYGERLRFNADGSLVDNEPLIVLHET-VYSADSAIDWFRRGDLE--DSEA----- 124 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE-------------RCNDFS 112 S H +IRR+G ++ VP +A+ A S + E N FS Sbjct: 125 ------ASYHAIIRRNGAVISIVPAQAKAYGAAESGFDTAEGLETLYGDPEQPPSVNSFS 178 Query: 113 IGIELE----GTDTLA----YTDAQYQQLAAVTRALIDCYPDIAKNMTGH--CDIAPDRK 162 I LE G D+ YT AQY+ LA + A+ +T H D++ +R Sbjct: 179 YHISLETPLDGQDSDPTHSGYTVAQYRSLAWLI----AQTEVPAERITTHKEVDLSGER- 233 Query: 163 TDPGPAFDWARFRVLVSK 180 DP +FD R + + Sbjct: 234 IDP-RSFDRDRLLKQLRQ 250 >UniRef50_P39800 N-acetylmuramoyl-L-alanine amidase xlyA n=4 Tax=Bacillus RepID=XLYA_BACSU Length = 297 Score = 71.8 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 53/166 (31%), Gaps = 23/166 (13%) Query: 20 DCRPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 + RP TP + VHN + S H + Sbjct: 14 NNRPGYAMTPLYITVHNTANTAVGADAAAHARYLKN-------------PDTTTSWHFTV 60 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTR 138 D EI Q++P ++ WHAG G N SIGIE+ + A + + Sbjct: 61 D-DTEIYQHLPLNENGWHAGDGNGSG----NRASIGIEICENADGDFAKATANA-QWLIK 114 Query: 139 ALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-WARFRVLVSKETT 183 L+ + N+ H + K P D W F+ + + Sbjct: 115 TLMAEHNISLANVVPHKYWSG--KECPRKLLDTWDSFKAGIGGGGS 158 >UniRef50_UPI0001979E35 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001979E35 Length = 180 Score = 71.4 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 47/147 (31%), Gaps = 23/147 (15%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 ++ + +++H + W Q H H + Sbjct: 35 NFIEHGEIGKIRAIILHRTMSKSAQSSIDW----------WQNH------KAKGAGTHFM 78 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG------TDTLAYTDAQYQ 131 I +DG I Q K WH G + +G N+ SIGIE+ T Q Sbjct: 79 IDKDGTIYQCATLYKTTWHVGARK-KGITITNNTSIGIEVVAWYDDKTHKWDEATREQKI 137 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIA 158 L + + L+ Y ++ H IA Sbjct: 138 ALRKIIKILLKHYNLTENDIYEHDKIA 164 >UniRef50_C3GU84 N-acetylmuramoyl-L-alanine amidase / S-layer protein n=2 Tax=Bacillus thuringiensis RepID=C3GU84_BACTU Length = 747 Score = 71.0 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 53/165 (32%), Gaps = 20/165 (12%) Query: 14 VPSPHYDCRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 VP+ + D RP + + +H + + Sbjct: 261 VPAGNLDIRPQNPMKAKYITIHETANTERGANAENHAKYLYNQA--------TQGTFRTA 312 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H + D EI Q++P ++ WHAG G+ N SIGIE+ Y A + Sbjct: 313 SWHFTVD-DKEIYQHLPTNENGWHAG----DGQGSGNMESIGIEIAVNQDGDYNKA-VEN 366 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF---DWARF 174 + L+ N+ H + K P +W F Sbjct: 367 AQKLVAHLMKQEGISGDNLRRHQQWSG--KKCPDIMISRGNWNNF 409 >UniRef50_A7VR21 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR21_9CLOT Length = 214 Score = 71.0 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 58/167 (34%), Gaps = 33/167 (19%) Query: 22 RPDD-ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR 80 RP T + +H + D +AH + VS H + Sbjct: 73 RPGVLRTVESITIHETANTSEG-------------ADAEAHSDYLSTTSDEVSWHYTVD- 118 Query: 81 DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRAL 140 D +I Q++P ++ AWH G N SIGIEL + D + A +T L Sbjct: 119 DHQIYQHLPDNEEAWH------SGDREGNHSSIGIELCVNADGNF-DQTMENAAKLTAFL 171 Query: 141 IDCYPDIAKNMTGHCDIAPDRKTDP------GPAFDWARFRVLVSKE 181 + Y ++ H D + K P G W F +V + Sbjct: 172 LKEYDLTIDDVKQHYDF--NGKDCPLIIRQEGR---WDEFLGMVQQN 213 >UniRef50_A3DJ52 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Clostridium thermocellum RepID=A3DJ52_CLOTH Length = 252 Score = 70.6 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 25/137 (18%) Query: 59 QAHPFFAEIAHLRVS-AHCLIRRDGEIVQYVPFDKRAWHAGVSQ------------YQGR 105 + + + +VS AH + + G+I Q+V + AW G++ Sbjct: 48 SSMISWFTSPNNKVSSAHFGVSKTGKIYQFVAIEDCAWANGLTSGIENATAELVLKKGES 107 Query: 106 ERCNDFSIGIELEGT---DTLAYTDAQYQQLAAVTRALI----DCYP----DIAKNMTGH 154 E N +S+ IE EG A T Q + + +I + Y K + GH Sbjct: 108 ENPNWYSVSIEHEGVWSETKGALTPEQLEATKMLHLYIIEYVKEKYGHEIVPSRKTIIGH 167 Query: 155 CDIAP-DRKTDPGPAFD 170 +I R PG F Sbjct: 168 HEIDKSQRANCPGELFP 184 >UniRef50_C4KDJ8 Peptidoglycan-binding domain 1 protein n=1 Tax=Thauera sp. MZ1T RepID=C4KDJ8_THASP Length = 274 Score = 70.2 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 61/177 (34%), Gaps = 26/177 (14%) Query: 17 PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 P+ R + ++ H+ + P P + L G D A P A Sbjct: 26 PNRG-RSEMGVVKGVICHHTAGP-RSGNMPSLGVLKNGRAD-LAGPL----------AQL 72 Query: 77 LIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELE--------GTDTLAYTDA 128 + RDG V RA HAG +++G N IGIE E + + Sbjct: 73 GLGRDGTFY--VIAAGRANHAGRGEWKGITDGNGSFIGIEAESTGIGDPTKPGFEPWPEV 130 Query: 129 QYQQLAAVTRALIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWARFRVLVSKETT 183 Q A++ A GH + A RK+DP D RFR V+ + Sbjct: 131 QLDAYRRGVAAILAHLGQDAGMCCGHKEYALPKGRKSDPHTL-DMERFRSEVAALMS 186 >UniRef50_B7HAI4 N-acetylmuramoyl-L-alanine amidase n=19 Tax=Bacillus cereus group RepID=B7HAI4_BACC4 Length = 533 Score = 70.2 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 17/153 (11%) Query: 14 VPSPHYDCRPDD-ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 VP+ + + RP + +P + +H G Sbjct: 127 VPAGNDNIRPQNYMSPKYITIHETDNTSVGAGARNHAQYLYNQA--------VGNIDRAA 178 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H + D EI Q++P ++ WHAG G N SI IE+ Y+ A Sbjct: 179 SWHFTVD-DKEIYQHLPLNENGWHAGDGDGPG----NRESIAIEIAVNSDGNYSKA-VDN 232 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 + L+ N+ H + K P Sbjct: 233 AKKLVAYLMKETGVPLNNIVKHQKWSG--KICP 263 >UniRef50_Q65A81 N-acetyl-anhydromuramyl-L-alanine amidase n=1 Tax=Salmonella enterica subsp. enterica serovar Typhimurium RepID=Q65A81_SALTY Length = 55 Score = 70.2 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 34/44 (77%), Positives = 37/44 (84%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG 44 ML ++GWLV ARRVPSPHYDCRPDDE P+LLVVHNISLPP Sbjct: 1 MLPDKGWLVEARRVPSPHYDCRPDDEKPSLLVVHNISLPPASLA 44 >UniRef50_A8E261 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Enterococcus phage phiEF24C RepID=A8E261_BPPHE Length = 289 Score = 70.2 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 49/161 (30%), Gaps = 29/161 (18%) Query: 15 PSP-HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 P+P + R + +++H+ + + T + A S Sbjct: 15 PNPMNAGSR-NGIPIDTIILHHNATTNKDVAMN------TWLLGGGAGT----------S 57 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVS---QYQGRERCNDFSIGIELEGTDTLAYT---D 127 AH EI+ V A+HAG + N SIGIE + Sbjct: 58 AHYECT-PTEIIGCVGEQYSAFHAGGTGGIDVPKIANPNQRSIGIENVNSSGAPNWSVDP 116 Query: 128 AQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPG 166 A + + Y +++ GH ++ PG Sbjct: 117 RTITNCARLVADICTRYGIPCDRQHVLGHNEVTAT--ACPG 155 >UniRef50_B0TCI8 N-acetylmuramoyl-l-alanine amidase, putative n=11 Tax=Firmicutes RepID=B0TCI8_HELMI Length = 240 Score = 69.9 bits (170), Expect = 4e-11, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 18/139 (12%) Query: 27 TPTLLVVHNISLPP---GEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR--D 81 P ++VH+ + GP D G H + +V H I + D Sbjct: 21 VPKGIMVHSTGANNPWLKRYVGP--DDGLLGKNPYNNHWNQDKPDGRQVCVHAFIGKLAD 78 Query: 82 GEI--VQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL--EGTDTLAYTDAQYQQLAAVT 137 G I Q +P++ R WH G S ND IG E+ +G + +Y A Y++ A + Sbjct: 79 GTIATYQTLPWNMRGWHCGGSG-------NDSYIGFEICEDGLNDASYFSAVYREAAELC 131 Query: 138 RALIDCYPDIAKNMTGHCD 156 L Y K++ H + Sbjct: 132 AYLCKEYGLTEKDVICHSE 150 >UniRef50_A7GU51 N-acetylmuramoyl-L-alanine amidase family 2 n=99 Tax=Bacillus cereus group RepID=A7GU51_BACCN Length = 843 Score = 69.5 bits (169), Expect = 5e-11, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 46/153 (30%), Gaps = 16/153 (10%) Query: 14 VPSPHYDCRPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 VP + RP P + +H + Sbjct: 224 VPKGNPQIRPGYAMDPRYITIHETANERRGADAKNHAKYLMNQA--------TGSTSRGA 275 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H + D EI Q++P ++ WHAG N SIGIE+ Y A + Sbjct: 276 SWHFTVD-DKEIYQHLPLNENGWHAGDG---TNGTGNRQSIGIEIAVNQDGNYEKA-VEN 330 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 +T L+ N+ H + K P Sbjct: 331 ARKLTAYLMQELNIPIDNVKKHQHWSG--KNCP 361 >UniRef50_P36550 N-acetylmuramoyl-L-alanine amidase cwlL n=4 Tax=Bacillus licheniformis RepID=CWLL_BACLI Length = 360 Score = 69.5 bits (169), Expect = 5e-11, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 44/142 (30%), Gaps = 17/142 (11%) Query: 31 LVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPF 90 +V+H + P F GT I SAH + R E +P Sbjct: 27 IVMHYTATPGASALNE--RDYFNGTC--------IAIKRKASSAHYFVDRK-EAQHIIPE 75 Query: 91 DKRAWHA--GVSQYQG--RERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPD 146 ++ A+HA Y + N SI +E+ Q A + L Y Sbjct: 76 NEVAYHAHDKNRCYVSFLKPNANTKSISVEMCVEKDGMIHSETVQNAAELVADLCKRYGL 135 Query: 147 IAKNMTGHCDIAPDRKTDPGPA 168 + H D+ K P P Sbjct: 136 STNKIVRHYDV--TNKICPAPW 155 >UniRef50_B1ZXM8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXM8_OPITP Length = 285 Score = 69.1 bits (168), Expect = 7e-11, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 67/247 (27%), Gaps = 116/247 (46%) Query: 20 DCRPDDETPTLLVVHN--ISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 D R E LVVH L F + +S H L Sbjct: 66 DRRALREAVDQLVVHYDACGLSSVCFD---------------------VLQQRGLSVHFL 104 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDA--------- 128 I DG + Q + ++A HA V+ ND SIGIEL +A Sbjct: 105 IDIDGTVYQTMDLREKAGHATVA--------NDRSIGIELANIGAYPPREAGPLAEWYRV 156 Query: 129 --------------------------------------------QYQ-------QLAAVT 137 QY L +T Sbjct: 157 ASGGGAQIVVPARTKEPRVRTPGFIGRPARSEPIRGVIQGRELVQYDFTPQQYAALIRLT 216 Query: 138 RALIDCYPDIA------------------------KNMTGHCDIAPDRKTDPGPAFDWAR 173 AL +P + + + GH + + K DPGPAF+WAR Sbjct: 217 AALCREFPRLRCEVPRRADGAVLAEKLPDAELARYRGILGHWHVQ-ENKVDPGPAFEWAR 275 Query: 174 FRVLVSK 180 F V + Sbjct: 276 FLADVRQ 282 >UniRef50_A4NW45 N-acetyl-anhydromuranmyl-L-alanine amidase n=1 Tax=Haemophilus influenzae 22.4-21 RepID=A4NW45_HAEIN Length = 58 Score = 68.7 bits (167), Expect = 8e-11, Method: Composition-based stats. Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALF 52 +EQG ++ R++ SPH+D RP+ + +LLV+H ISLPP +FGG ++D F Sbjct: 7 IEQG-ILDCRQIQSPHFDKRPNPQDISLLVIHYISLPPEQFGGGYVDDFF 55 >UniRef50_Q8KD30 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Chlorobaculum tepidum RepID=Q8KD30_CHLTE Length = 258 Score = 68.7 bits (167), Expect = 9e-11, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 41/148 (27%) Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRER-CNDFSIGIELEGTD------------- 121 +I +DG I Q P D +HAG S Y G +D +GIE+E Sbjct: 110 FVIDKDGNIGQNFPLDSWGYHAGKSSYPGLNGTVSDELVGIEIECAGLLTKEGSTYKTWY 169 Query: 122 -----------------------TLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCD 156 YT Q + L + L PD+ + GH + Sbjct: 170 QTAVAEEEVRYIKTKTDNQQAGYYEKYTQEQEEALTRLLLWLHKNNPDVFSLDFVVGHDE 229 Query: 157 IAPDRKTDPGP--AFDWARFRVLVSKET 182 ++P RK DPG + ++R + ++ Sbjct: 230 VSPGRKNDPGGSLSMSMPKYREFLKQQA 257 >UniRef50_D0LV42 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LV42_HALO1 Length = 655 Score = 67.9 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 56/208 (26%), Gaps = 63/208 (30%) Query: 20 DCRPDDETPTLLVVHNISLPPGEFGGPWIDAL--FTGTIDPQAHPFFAEIAHLRVSAHCL 77 + RP+ + PP E I F +S H L Sbjct: 53 NTRPNRYALRPSLRRYGESPPLEAVQNSIRQFIVHHDGCPSAKVCFNVLHNERGLSCHFL 112 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT--------------- 122 + DG I Q + A+HA N SIGIE+ Sbjct: 113 MDNDGTIYQTMDLSLMAYHAA--------GFNARSIGIEICNRGDAKRDPNYYSKKGQKR 164 Query: 123 --------------LAYTDAQYQQLAAVTRALIDCYPDIA-------------------- 148 +T Q + + A+++ + P++ Sbjct: 165 EATTVRIHGHVYKCFRFTPQQIEAMQALSQGISRALPNLPLEYPQDQPGQQAWGEIPNAA 224 Query: 149 --KNMTGHCDIAPDRKTDPGPAFDWARF 174 + GH RK DPGP FD+ Sbjct: 225 QFAGILGHYHTT-RRKWDPGP-FDFKEL 250 >UniRef50_B0ACG4 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACG4_9CLOT Length = 287 Score = 67.5 bits (164), Expect = 2e-10, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 22/142 (15%) Query: 22 RPD-DETPTLLVVHNISLPP--GEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 RP + T + +H P G+ + + + F S+H +I Sbjct: 19 RPGVPLSATKIAIHYTGKPDVDGDKTVSYFNNVVANGCKIGNRYIF-------ASSHYVI 71 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLAAVT 137 GEI Q +P ++ + N ++I IE+ T + YTDA Y+ + + Sbjct: 72 GLGGEIYQLIPTNEICY--------ATNSANSYAIAIEVATTGSDNHYTDATYKSMVHLC 123 Query: 138 RALIDCYPDI--AKNMTGHCDI 157 L Y ++ K++ H D+ Sbjct: 124 AWLCS-YKNLNCKKDIITHTDV 144 >UniRef50_B6XUG6 Putative uncharacterized protein n=2 Tax=Bifidobacterium catenulatum DSM 16992 RepID=B6XUG6_9BIFI Length = 302 Score = 67.5 bits (164), Expect = 2e-10, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 52/164 (31%), Gaps = 37/164 (22%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 A+ SP++ + + +H + ++ + F Sbjct: 7 AKWRGSPNHYQGRNGLHVDHITLHIMVGRLAGTDSCFMRSSF------------------ 48 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFS-IGIELEGT-DTLAYTDA 128 + ++H + DG + Q+V + +D S I IE EG + TDA Sbjct: 49 QAASHYGVGGDGSVYQWVDEA-------NGSWADANWQSDCSGITIEHEGGMAGVPVTDA 101 Query: 129 QYQQLAAVTRALIDCY----------PDIAKNMTGHCDIAPDRK 162 + + A + + Y + A N+ H ++ Sbjct: 102 EVEASAKLCADIARRYGWKTLWHDASGNRAGNIVLHREVPGTDH 145 >UniRef50_A8LCD7 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Frankia RepID=A8LCD7_FRASN Length = 361 Score = 67.5 bits (164), Expect = 2e-10, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 12/87 (13%) Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAW--HAGVSQYQGRERCNDFSIGIELEGTDT 122 + +VSAH + + GE QYVPFD+RAW AG N F I +E EG D+ Sbjct: 137 FDNPASQVSAHLWLSKAGEFEQYVPFDRRAWAQAAG----------NPFWISVECEGYDS 186 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAK 149 YT Q Q+L + + + + Sbjct: 187 EDYTAIQVQRLGELFAWGMREFGWRPE 213 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 236 2e-61 UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 234 1e-60 UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 225 6e-58 UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 225 7e-58 UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycet... 217 2e-55 UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 214 1e-54 UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regul... 213 2e-54 UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C... 212 5e-54 UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=... 212 6e-54 UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 211 1e-53 UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regu... 208 8e-53 UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regu... 207 1e-52 UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK... 207 2e-52 UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma p... 204 9e-52 UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regu... 204 1e-51 UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 ... 202 3e-51 UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regu... 201 8e-51 UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 T... 200 2e-50 UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regu... 199 4e-50 UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regu... 198 7e-50 UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_... 195 5e-49 UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=... 195 6e-49 UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 195 7e-49 UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4... 194 1e-48 UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A... 191 9e-48 UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amid... 188 6e-47 UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regu... 188 7e-47 UniRef50_A6T2C3 Negative regulator of beta-lactamase expression ... 187 1e-46 UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regu... 185 5e-46 UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkh... 184 1e-45 UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 180 2e-44 UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algor... 175 6e-43 UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regu... 174 1e-42 UniRef50_Q093H8 Negative regulator of beta-lactamase expression ... 174 1e-42 UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 173 2e-42 UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regu... 173 2e-42 UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodos... 173 3e-42 UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodoba... 173 3e-42 UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodo... 171 8e-42 UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6... 169 4e-41 UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 168 8e-41 UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regu... 168 9e-41 UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 166 3e-40 UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 ... 166 3e-40 UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphapr... 165 8e-40 UniRef50_A8TR24 Negative regulator of beta-lactamase expression ... 164 1e-39 UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regu... 163 2e-39 UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regu... 163 3e-39 UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 T... 158 6e-38 UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regu... 158 6e-38 UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regu... 158 6e-38 UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 ... 156 2e-37 UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR... 155 5e-37 UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 155 6e-37 UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 155 9e-37 UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regu... 154 1e-36 UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xant... 153 3e-36 UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protei... 152 5e-36 UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax... 151 1e-35 UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 150 2e-35 UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 ... 150 2e-35 UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvu... 150 2e-35 UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphin... 150 3e-35 UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protei... 150 3e-35 UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regu... 148 7e-35 UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacte... 147 2e-34 UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protei... 146 4e-34 UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase am... 145 7e-34 UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protei... 145 8e-34 UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3... 145 9e-34 UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 ... 144 1e-33 UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Ta... 144 2e-33 UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacte... 143 2e-33 UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-... 143 2e-33 UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5... 143 3e-33 UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 143 3e-33 UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protei... 142 4e-33 UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regu... 142 4e-33 UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brach... 142 5e-33 UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regu... 142 6e-33 UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-... 141 7e-33 UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 141 8e-33 UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regu... 140 2e-32 UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candida... 140 2e-32 UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aerom... 139 4e-32 UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromoh... 139 4e-32 UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negati... 139 5e-32 UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regu... 139 5e-32 UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_... 139 6e-32 UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2... 138 1e-31 UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regu... 136 3e-31 UniRef50_C4DNA4 Negative regulator of beta-lactamase expression ... 136 3e-31 UniRef50_C1QGN2 Negative regulator of beta-lactamase expression ... 136 4e-31 UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=... 135 5e-31 UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regu... 135 7e-31 UniRef50_D2Q0D6 N-acetylmuramyl-L-alanine amidase, negative regu... 134 1e-30 UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regu... 133 2e-30 UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax... 133 2e-30 UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regu... 133 3e-30 UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO 133 3e-30 UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoar... 132 7e-30 UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9... 132 7e-30 UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regu... 131 9e-30 UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=... 131 1e-29 UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regu... 131 1e-29 UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regu... 130 2e-29 UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regu... 130 3e-29 UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regu... 129 4e-29 UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=... 129 6e-29 UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regu... 128 8e-29 UniRef50_UPI0001B539A2 amidase n=1 Tax=Streptomyces sp. AA4 RepI... 128 1e-28 UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regu... 128 1e-28 UniRef50_A6GHP2 Putative amidase n=1 Tax=Plesiocystis pacifica S... 127 1e-28 UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regu... 127 2e-28 UniRef50_B1TGB7 N-acetylmuramyl-L-alanine amidase, negative regu... 126 3e-28 UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 126 4e-28 UniRef50_C0CQ24 Putative uncharacterized protein n=4 Tax=Clostri... 126 5e-28 UniRef50_A9AXU4 N-acetylmuramyl-L-alanine amidase, negative regu... 125 5e-28 UniRef50_A3TR75 Putative amidase n=1 Tax=Janibacter sp. HTCC2649... 124 1e-27 UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1... 123 3e-27 UniRef50_B0G3S2 Putative uncharacterized protein n=5 Tax=Clostri... 123 3e-27 UniRef50_D1SBP4 N-acetylmuramyl-L-alanine amidase, negative regu... 121 1e-26 UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-... 121 1e-26 UniRef50_B4AHH5 N-acetylmuramoyl-L-alanine amidase XlyB (Cellwal... 121 1e-26 UniRef50_B7HAI4 N-acetylmuramoyl-L-alanine amidase n=19 Tax=Baci... 120 2e-26 UniRef50_A7GU51 N-acetylmuramoyl-L-alanine amidase family 2 n=99... 120 2e-26 UniRef50_C4SAC3 Negative regulator of beta-lactamase expression ... 120 2e-26 UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces R... 120 2e-26 UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orien... 119 3e-26 UniRef50_P54450 N-acetylmuramoyl-L-alanine amidase cwlH n=1 Tax=... 119 4e-26 UniRef50_A4WS28 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 119 5e-26 UniRef50_Q5WIB6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacil... 119 5e-26 UniRef50_C3GU84 N-acetylmuramoyl-L-alanine amidase / S-layer pro... 118 8e-26 UniRef50_D2AX66 Negative regulator of beta-lactamase expression-... 118 1e-25 UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 ... 118 1e-25 UniRef50_C4DKK4 Negative regulator of beta-lactamase expression ... 117 1e-25 UniRef50_UPI00019739B2 N-acetylmuramoyl-L-alanine amidase n=1 Ta... 117 2e-25 UniRef50_D2AYL5 Negative regulator of beta-lactamase expression-... 116 2e-25 UniRef50_B5CSL4 Putative uncharacterized protein n=4 Tax=Clostri... 116 3e-25 UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 ... 116 3e-25 UniRef50_B6BGC2 B-N-acetylglucosaminidase, glycoside hydrolase f... 116 5e-25 UniRef50_C8VXP6 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Pepto... 115 6e-25 UniRef50_P39800 N-acetylmuramoyl-L-alanine amidase xlyA n=4 Tax=... 115 6e-25 UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HC... 115 7e-25 UniRef50_UPI0001BC309D N-acetylmuramoyl-L-alanine amidase n=1 Ta... 115 7e-25 UniRef50_UPI00016C05EA N-acetylmuramoyl-L-alanine amidase n=1 Ta... 114 1e-24 UniRef50_Q2SEW1 Negative regulator of beta-lactamase expression ... 114 1e-24 UniRef50_C0WEF9 Putative uncharacterized protein n=1 Tax=Acidami... 113 2e-24 UniRef50_A3HZ10 Putative uncharacterized protein n=1 Tax=Algorip... 113 2e-24 UniRef50_B2A1Q6 N-acetylmuramoyl-L-alanine amidase family 2 n=1 ... 113 3e-24 UniRef50_C4ZEY9 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Clost... 113 3e-24 UniRef50_Q04T28 Amidase n=4 Tax=Leptospira RepID=Q04T28_LEPBJ 113 3e-24 UniRef50_C5PKQ4 Putative uncharacterized protein n=2 Tax=Sphingo... 113 3e-24 UniRef50_Q30PL8 Negative regulator of AmpC, AmpD n=4 Tax=Bacteri... 113 4e-24 UniRef50_UPI0001BCD943 Peptidoglycan-binding domain 1 protein n=... 112 6e-24 UniRef50_A0M513 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Grame... 111 1e-23 UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synec... 111 1e-23 UniRef50_C3EV93 N-acetylmuramoyl-L-alanine amidase n=11 Tax=Baci... 111 1e-23 UniRef50_Q7NG55 Glr3318 protein n=1 Tax=Gloeobacter violaceus Re... 111 1e-23 UniRef50_Q8XMX3 Probable N-acetylmuramoyl-L-alanine amidase n=8 ... 111 1e-23 UniRef50_C7Q860 N-acetylmuramyl-L-alanine amidase, negative regu... 111 1e-23 UniRef50_A5Z412 Putative uncharacterized protein n=1 Tax=Eubacte... 111 1e-23 UniRef50_A8RYS3 Putative uncharacterized protein n=3 Tax=Clostri... 111 2e-23 UniRef50_A0Q0S8 N-acetylmuramoyl-L-alanine amidase cwlL (Cellwal... 110 2e-23 UniRef50_C2TTH9 N-acetylmuramoyl-L-alanine amidase / S-layer pro... 110 2e-23 UniRef50_B1V3W0 N-acetylmuramoyl-L-alanine amidase, family 2 n=8... 110 3e-23 UniRef50_A5IAD5 N-acetylmuramoyl-L-alanine amidase; amidase 2 n=... 109 3e-23 UniRef50_B1I5B9 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 109 4e-23 UniRef50_C0Z5F5 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 109 5e-23 UniRef50_Q925X1 Lin2374 protein n=2 Tax=Listeria RepID=Q925X1_LISIN 108 1e-22 UniRef50_D2QH68 N-acetylmuramyl-L-alanine amidase, negative regu... 108 1e-22 UniRef50_C0F005 Putative uncharacterized protein n=1 Tax=Eubacte... 108 1e-22 UniRef50_B7INM6 N-acetylmuramoyl-L-alanine amidase n=60 Tax=Baci... 107 1e-22 UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2... 107 2e-22 UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=... 107 2e-22 UniRef50_B0MAX7 Putative uncharacterized protein n=1 Tax=Anaeros... 107 2e-22 UniRef50_Q5Z3U1 Putative uncharacterized protein n=1 Tax=Nocardi... 107 2e-22 UniRef50_A6NPI6 Putative uncharacterized protein n=1 Tax=Bactero... 107 2e-22 UniRef50_P36550 N-acetylmuramoyl-L-alanine amidase cwlL n=4 Tax=... 106 3e-22 UniRef50_B9XDJ7 N-acetylmuramoyl-L-alanine amidase family 2 n=1 ... 106 3e-22 UniRef50_C1I9T8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clost... 106 4e-22 UniRef50_A7VR21 Putative uncharacterized protein n=1 Tax=Clostri... 105 5e-22 UniRef50_A3DIC1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clost... 105 6e-22 UniRef50_C7N6M2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Slack... 105 7e-22 UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regu... 105 9e-22 UniRef50_C3DAX2 N-acetylmuramoyl-L-alanine amidase n=10 Tax=Baci... 104 1e-21 UniRef50_UPI0001AEF803 putative N-acetylmuramoyl-L-alanine amida... 104 1e-21 UniRef50_A3ICX8 XlyB n=3 Tax=Bacillaceae RepID=A3ICX8_9BACI 104 2e-21 UniRef50_UPI00017F5867 N-acetylmuramoyl-L-alanine amidase family... 104 2e-21 UniRef50_A9VVT9 N-acetylmuramoyl-L-alanine amidase n=50 Tax=root... 103 2e-21 UniRef50_Q65KE6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=root ... 103 2e-21 UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=A... 103 3e-21 UniRef50_Q9ZX49 Gp29 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZX4... 103 3e-21 UniRef50_C7UBT6 Sporulation domain-containing protein n=3 Tax=Ba... 103 3e-21 UniRef50_A9B3J4 N-acetylmuramyl-L-alanine amidase, negative regu... 103 4e-21 UniRef50_C5RQQ9 N-acetylmuramoyl-L-alanine amidase family 2 n=3 ... 103 4e-21 UniRef50_A4TAY9 Peptidoglycan-binding domain 1 protein n=5 Tax=r... 102 5e-21 UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regu... 102 7e-21 UniRef50_C4V1H2 Putative uncharacterized protein n=1 Tax=Selenom... 102 7e-21 UniRef50_D2RJL3 N-acetylmuramyl-L-alanine amidase, negative regu... 101 8e-21 UniRef50_Q3AXW0 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 101 9e-21 UniRef50_B8HV25 N-acetylmuramyl-L-alanine amidase, negative regu... 101 1e-20 UniRef50_A0RH25 N-acetylmuramoyl-L-alanine amidase n=77 Tax=Baci... 101 1e-20 UniRef50_C6JDZ2 Putative uncharacterized protein n=1 Tax=Ruminoc... 100 2e-20 UniRef50_A7GH75 Prophage LambdaCh01, N-acetylmuramoyl-L-alanine ... 100 2e-20 UniRef50_B9YE42 Putative uncharacterized protein n=1 Tax=Holdema... 100 2e-20 UniRef50_Q5L2J6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Geoba... 100 2e-20 UniRef50_A7VT90 Putative uncharacterized protein n=2 Tax=Clostri... 100 2e-20 UniRef50_A6CD01 Probable N-acetylmuramoyl-L-alanine amidase n=1 ... 100 3e-20 UniRef50_B8R884 Gp19 n=3 Tax=root RepID=B8R884_9CAUD 99 3e-20 UniRef50_C1IB98 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clost... 99 3e-20 UniRef50_B8FLA2 N-acetylmuramyl-L-alanine amidase, negative regu... 100 4e-20 UniRef50_A0YR44 AmpD n=3 Tax=Oscillatoriales RepID=A0YR44_9CYAN 100 5e-20 UniRef50_UPI0001B554B9 secreted amidase n=1 Tax=Streptomyces sp.... 99 6e-20 UniRef50_C9A1B6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Enter... 99 8e-20 UniRef50_A7G716 N-acetylmuramoyl-L-alanine amidase n=7 Tax=Clost... 99 8e-20 UniRef50_C1FV42 Prophage LambdaCh01, N-acetylmuramoyl-L-alanine ... 98 9e-20 UniRef50_A5Z605 Putative uncharacterized protein n=1 Tax=Eubacte... 98 9e-20 UniRef50_A0LPT1 N-acetylmuramyl-L-alanine amidase, negative regu... 98 1e-19 UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD... 98 2e-19 UniRef50_O34391 N-acetylmuramoyl-L-alanine amidase xlyB n=3 Tax=... 98 2e-19 UniRef50_B4ALM5 N-acetylmuramoyl-L-alanine amidase CwlA (Cellwal... 97 2e-19 UniRef50_P14892 N-acetylmuramoyl-L-alanine amidase cwlA n=7 Tax=... 97 2e-19 UniRef50_C1I5Y6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clost... 97 2e-19 UniRef50_C0G0C8 N-acetylmuramyl-L-alanine amidase, negative regu... 97 3e-19 UniRef50_C0W9N9 Putative uncharacterized protein n=2 Tax=Veillon... 97 3e-19 UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regu... 97 3e-19 UniRef50_O31982 N-acetylmuramoyl-L-alanine amidase blyA n=7 Tax=... 96 4e-19 UniRef50_C7MM46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Crypt... 96 4e-19 UniRef50_A9QTG2 Putative alanine amidase n=1 Tax=Bacillus phage ... 96 4e-19 UniRef50_C7Q684 N-acetylmuramyl-L-alanine amidase, negative regu... 96 5e-19 UniRef50_Q3ABL1 Prophage LambdaCh01, N-acetylmuramoyl-L-alanine ... 96 5e-19 UniRef50_Q609E7 N-acetylmuramoyl-L-alanine amidase domain/peptid... 96 5e-19 UniRef50_B5LLI8 Gp242 n=8 Tax=unclassified Myoviridae RepID=B5LL... 96 6e-19 UniRef50_P81717 N-acetylmuramoyl-L-alanine amidase A n=1 Tax=Ach... 95 7e-19 UniRef50_C4V2A1 Possible N-acetylmuramoyl-L-alanine amidase n=3 ... 95 7e-19 UniRef50_D1XA05 N-acetylmuramyl-L-alanine amidase, negative regu... 95 8e-19 UniRef50_C0A8M7 Negative regulator of beta-lactamase expression-... 95 8e-19 UniRef50_UPI0001693C62 N-acetylmuramoyl-L-alanine amidase, famil... 95 8e-19 UniRef50_C1D367 Putative bifunctional protein, : N-acetylmuramoy... 95 8e-19 UniRef50_B9L0F4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 95 8e-19 UniRef50_UPI0001C1705F AmpD n=2 Tax=Nostocaceae RepID=UPI0001C1705F 95 1e-18 UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 95 1e-18 UniRef50_A9AWP8 N-acetylmuramyl-L-alanine amidase, negative regu... 95 1e-18 UniRef50_A1UKT0 Peptidoglycan-binding domain 1 protein n=3 Tax=M... 95 1e-18 UniRef50_Q05S34 N-acetylmuramoyl-L-alanine amidase, family 2 n=1... 95 1e-18 UniRef50_A9NEW3 Ig-like domain surface-anchored protein with pre... 95 2e-18 UniRef50_D1Y7B5 Putative N-acetylmuramoyl-L-alanine amidase n=1 ... 94 2e-18 UniRef50_Q331X1 Putative N-acetylmuramoyl-L-alanine amidase n=2 ... 94 2e-18 UniRef50_C6IMI3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacte... 94 2e-18 Sequences not found previously or not previously below threshold: >UniRef50_P13016 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=65 Tax=Gammaproteobacteria RepID=AMPD_ECOLI Length = 183 Score = 236 bits (603), Expect = 2e-61, Method: Composition-based stats. Identities = 183/183 (100%), Positives = 183/183 (100%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA Sbjct: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT Sbjct: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK Sbjct: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 Query: 181 ETT 183 ETT Sbjct: 181 ETT 183 >UniRef50_A4W6L1 N-acetylmuramoyl-L-alanine amidase, family 2 n=36 Tax=Proteobacteria RepID=A4W6L1_ENT38 Length = 187 Score = 234 bits (597), Expect = 1e-60, Method: Composition-based stats. Identities = 149/182 (81%), Positives = 162/182 (89%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 M L+ GWLV AR VPSPH+DCRP+DE+P+LLVVHNISLPPGEFGGPWIDALFTGTIDP A Sbjct: 1 MQLQNGWLVDARHVPSPHHDCRPEDESPSLLVVHNISLPPGEFGGPWIDALFTGTIDPNA 60 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVS Y GRE+CNDFSIGIELEGT Sbjct: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSSYCGREKCNDFSIGIELEGT 120 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 DT YTDAQYQ L AVTR LI CYP I+ N+TGH DIAP RKTDPGPAFDW+RFR +++ Sbjct: 121 DTTPYTDAQYQALCAVTRKLIACYPTISDNITGHSDIAPVRKTDPGPAFDWSRFRAMLTA 180 Query: 181 ET 182 + Sbjct: 181 SS 182 >UniRef50_Q4ZY97 N-acetylmuramoyl-L-alanine amidase, family 2 n=14 Tax=Gammaproteobacteria RepID=Q4ZY97_PSEU2 Length = 182 Score = 225 bits (574), Expect = 6e-58, Method: Composition-based stats. Identities = 95/175 (54%), Positives = 118/175 (67%), Gaps = 2/175 (1%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GW G + PSP+++ RP+ E +LLV+HNISLPP +F + A F +D HP+F Sbjct: 7 SGWCDGVQHCPSPNFNARPEGE-ISLLVIHNISLPPAQFKTGKVQAFFQNQLDIDEHPYF 65 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 IA LRVSAH LI RDGE++Q+V RAWHAGVS +QGRE CNDFS+GIELEGTD Sbjct: 66 VGIADLRVSAHFLIERDGEVIQFVSCLDRAWHAGVSSFQGREGCNDFSVGIELEGTDDQP 125 Query: 125 YTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 +TDAQY L +TR L + + + GH D+AP RKTDPGP FDWARFR + Sbjct: 126 FTDAQYDALIDLTRQLRQAFEAITPERICGHSDVAPGRKTDPGPCFDWARFRAAL 180 >UniRef50_P82974 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=192 Tax=Proteobacteria RepID=AMPD_CITFR Length = 187 Score = 225 bits (573), Expect = 7e-58, Method: Composition-based stats. Identities = 159/179 (88%), Positives = 167/179 (93%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 MLL++GWL ARRVPSPHYDCRPDDE P+LLVVHNISLPPGEFGGPWIDALFTGTIDP A Sbjct: 1 MLLDEGWLAEARRVPSPHYDCRPDDENPSLLVVHNISLPPGEFGGPWIDALFTGTIDPNA 60 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HP+FA IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVS YQGRERCNDFSIGIELEGT Sbjct: 61 HPYFAGIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSSYQGRERCNDFSIGIELEGT 120 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 DTLAYTDAQYQQLAAVT ALI YP IA NMTGHC+IAP+RKTDPGP+FDWARFR LV+ Sbjct: 121 DTLAYTDAQYQQLAAVTNALITRYPAIANNMTGHCNIAPERKTDPGPSFDWARFRALVT 179 >UniRef50_C9R6I7 Protein AmpD n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R6I7_AGGAD Length = 217 Score = 217 bits (552), Expect = 2e-55, Method: Composition-based stats. Identities = 95/178 (53%), Positives = 126/178 (70%), Gaps = 1/178 (0%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 ++ GWL+ RRV SPH+D RPD + +LL++H ISLPP +FGG +ID F G +D QAH Sbjct: 40 QIKDGWLLDERRVLSPHFDQRPDPQDISLLIIHYISLPPEQFGGGYIDDFFQGKLDAQAH 99 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 P+F EI+ LRVSAHCLI R G I QYV F+ RAWHAG+S ++GRE+CNDF+IGIELEG++ Sbjct: 100 PYFQEISLLRVSAHCLIERTGRITQYVNFNDRAWHAGLSYFEGREKCNDFAIGIELEGSN 159 Query: 122 TLAYTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 +T QY L +TR ++ YP + + GHCD++P RK DPG FDW R+ + Sbjct: 160 EQPFTTQQYDTLQRLTRQIMQAYPRITKERIVGHCDVSPGRKIDPGQYFDWQRYLQHL 217 >UniRef50_Q46X31 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Proteobacteria RepID=Q46X31_RALEJ Length = 203 Score = 214 bits (545), Expect = 1e-54, Method: Composition-based stats. Identities = 100/177 (56%), Positives = 123/177 (69%), Gaps = 2/177 (1%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 + +GW+ ARRVPSP++D RP L+V+HNISLPPG+FG I+A F +DP Sbjct: 14 LPDAEGWVPAARRVPSPNFDERPAGMPVDLVVLHNISLPPGQFGSGDIEAFFQNRLDPDR 73 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HPFFA I ++VSAH L+RRDGE+VQ+VP KRAWHAG S + GR RCNDFS+GIE+EGT Sbjct: 74 HPFFATIHQVQVSAHFLVRRDGELVQFVPCTKRAWHAGQSDFFGRSRCNDFSVGIEIEGT 133 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 D L +T AQY + + +AL P A + GH DIAP RKTDPGP FDW RF L Sbjct: 134 DDLPFTAAQYTTTSTLVKALRATLPVRA--VAGHSDIAPGRKTDPGPHFDWDRFAGL 188 >UniRef50_B0VMP8 N-acetyl-anhydromuramyl-L-alanine amidase (Regulates ampC) n=25 Tax=Proteobacteria RepID=B0VMP8_ACIBS Length = 189 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 90/179 (50%), Positives = 120/179 (67%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 G L GAR+VPSP+++ RP ++VVHNISLPP +FGG +I+ F +D HP+F Sbjct: 11 DGQLKGARQVPSPNFNQRPAGTEIQMIVVHNISLPPSQFGGGYIEQFFQNKLDWSVHPYF 70 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 I ++VS H LI R GE++Q+V F+ RAWHAG S Y + CND+SIGIELEG+D L Sbjct: 71 QTIEGMQVSTHLLILRTGEVLQFVNFNDRAWHAGRSSYLAKIECNDYSIGIELEGSDDLP 130 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 + D QY+ L V A+ YP+I ++ GH DIAP RKTDPGP F W FR L++++ T Sbjct: 131 FEDLQYEVLTDVVTAIRQAYPEIKNHIAGHSDIAPGRKTDPGPYFKWQHFRQLLAQKKT 189 >UniRef50_C6APP4 Protein AmpD n=8 Tax=Gammaproteobacteria RepID=C6APP4_AGGAN Length = 184 Score = 212 bits (540), Expect = 5e-54, Method: Composition-based stats. Identities = 92/179 (51%), Positives = 127/179 (70%), Gaps = 1/179 (0%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 + +++GWL R+V SPH+D RP+ + +LL++H ISLPP +FGG +ID F G + P Sbjct: 6 LKIDKGWLTNTRKVVSPHFDARPNPQDISLLIIHYISLPPEQFGGSYIDDFFQGKLAPNR 65 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HP+FAEI+ LRVSAHCLI R GEI QYV F+ RAWHAG+S ++GRE+CNDF+IGIELEG+ Sbjct: 66 HPYFAEISTLRVSAHCLINRAGEITQYVNFNDRAWHAGISCFEGREKCNDFAIGIELEGS 125 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 + +T QY L +T+ ++ YP + + GHCD++P RK DPG FDWA + + Sbjct: 126 NEQPFTTQQYVSLQRLTQEIMRAYPLITKERIVGHCDVSPGRKIDPGQYFDWATYLGQL 184 >UniRef50_Q65VN8 AmpD protein n=13 Tax=Gammaproteobacteria RepID=Q65VN8_MANSM Length = 190 Score = 212 bits (539), Expect = 6e-54, Method: Composition-based stats. Identities = 89/182 (48%), Positives = 126/182 (69%), Gaps = 1/182 (0%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 + ++ GWL G R++ SPH+D RP +LLV+H ISLPP +FGG +I+ F G ++P+ Sbjct: 8 IKIKNGWLSGVRKIISPHFDSRPSQADISLLVIHYISLPPEQFGGGYIEDFFQGKLNPET 67 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HP+F I +RVSAHCLI RDG + Q+V F+ RAWHAG S +QGRE+CND++IGIELEG+ Sbjct: 68 HPYFQTIYQIRVSAHCLIGRDGRVTQFVSFNDRAWHAGESCFQGREKCNDYAIGIELEGS 127 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 + +T+ QYQ+LA +T + YP + GHCD+AP RK DPG F+W ++ L+ Sbjct: 128 NEQPFTEVQYQRLAELTNIIRHYYPKITEDRIVGHCDVAPGRKIDPGQYFEWTKYFDLLK 187 Query: 180 KE 181 + Sbjct: 188 ES 189 >UniRef50_A5WCS6 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Psychrobacter RepID=A5WCS6_PSYWF Length = 206 Score = 211 bits (537), Expect = 1e-53, Method: Composition-based stats. Identities = 93/185 (50%), Positives = 119/185 (64%), Gaps = 6/185 (3%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGP------WIDALFTG 54 + +E G L A +PSP+Y+ RP+ + +V+HNISLPP EFG ++ ALFT Sbjct: 17 LSIESGLLTQADWLPSPNYNQRPESCEISAIVIHNISLPPNEFGQTNKQGLHYVKALFTN 76 Query: 55 TIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIG 114 T+D AHP+F I + VSAH I R G+I Q V F+ RAWHAG S Y GR CND+SIG Sbjct: 77 TLDWDAHPYFKSIEGMEVSAHLFIERSGQITQLVNFENRAWHAGRSSYLGRPECNDYSIG 136 Query: 115 IELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 IELEG+D A+T QY L++V A+ YP +++TGH DIAP RKTDPG F+W Sbjct: 137 IELEGSDFQAFTAEQYTALSSVIAAIYKAYPKTRRHLTGHSDIAPGRKTDPGEYFEWDTL 196 Query: 175 RVLVS 179 R LVS Sbjct: 197 RDLVS 201 >UniRef50_A1TKH5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Acidovorax RepID=A1TKH5_ACIAC Length = 209 Score = 208 bits (529), Expect = 8e-53, Method: Composition-based stats. Identities = 83/180 (46%), Positives = 107/180 (59%), Gaps = 2/180 (1%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 GW + A +PSP++ RP L+VVH+ISLPPGE+G + LFT +D AH Sbjct: 21 RWNGGWYLPAMALPSPNFGPRPAQAAIDLIVVHSISLPPGEYGTGEVQRLFTNALDWDAH 80 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 P++A I L+VSAH I R G + Q+V RAWHAG S Y+GR+ CND SIGIELEG + Sbjct: 81 PYYAGIRGLQVSAHFFIERGGRLWQFVDCGDRAWHAGPSAYRGRDNCNDDSIGIELEGLE 140 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 + AQYQ LA + R + YP ++ GH +AP RK DPGP FDW R + Sbjct: 141 GDTFEPAQYQALATLCRDIAQRYPV--AHVAGHEHVAPGRKRDPGPGFDWRELRSRLGSP 198 >UniRef50_C7RNH8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=55 Tax=Proteobacteria RepID=C7RNH8_9PROT Length = 195 Score = 207 bits (527), Expect = 1e-52, Method: Composition-based stats. Identities = 93/173 (53%), Positives = 117/173 (67%), Gaps = 2/173 (1%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 + GWL A + SP+ D RP E +++V+H ISLPP FGG I LFT +DP AH Sbjct: 11 MPAGGWLDEALHIVSPNRDPRPPGEVVSMIVIHAISLPPARFGGDGIARLFTNRLDPAAH 70 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 P+FA+I LRVSAH L+RRDGE++Q+V +RAWHAG+S ++GR+ CNDFS+GIELEG D Sbjct: 71 PYFAQIIGLRVSAHFLVRRDGELIQFVSCRERAWHAGLSAWKGRQGCNDFSLGIELEGCD 130 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + DAQY L A+ L YP A + GH DI+P RKTDPGP FDW R Sbjct: 131 ESPFEDAQYSCLLALVGRLCAGYPIDA--VVGHSDISPGRKTDPGPCFDWRRL 181 >UniRef50_C8PWQ1 Protein AmpD n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWQ1_9GAMM Length = 219 Score = 207 bits (526), Expect = 2e-52, Method: Composition-based stats. Identities = 90/187 (48%), Positives = 113/187 (60%), Gaps = 6/187 (3%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGP------WIDALFTGTI 56 +EQG L V SP++ RPD L+V+HNISLPP EFG ++ A F + Sbjct: 26 IEQGLLSPCEFVASPNFGQRPDPNDIHLIVIHNISLPPSEFGLKNNQGEHFVRAFFQNQL 85 Query: 57 DPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE 116 DP+AHP+FA I +VSAH I RDG I Q+V FD RAWHAG S Y G CND+SIGIE Sbjct: 86 DPKAHPYFATIYQQQVSAHLFIERDGSITQFVSFDARAWHAGKSSYLGVPNCNDYSIGIE 145 Query: 117 LEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 LEG D + D QYQ L+ V A+ YP ++ GH DIA RK+DPG FDW + R Sbjct: 146 LEGDDYSEFDDRQYQALSGVIAAIYQAYPKTVNHLAGHSDIARGRKSDPGLYFDWVKLRN 205 Query: 177 LVSKETT 183 +V++ Sbjct: 206 MVNRNMV 212 >UniRef50_B5JVS6 Negative regulator of AmpC, AmpD n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVS6_9GAMM Length = 206 Score = 204 bits (520), Expect = 9e-52, Method: Composition-based stats. Identities = 101/191 (52%), Positives = 128/191 (67%), Gaps = 10/191 (5%) Query: 3 LEQGWL--VGARRVPSPHYDCRP-------DDETPTLLVVHNISLPPGEFGGPWIDALFT 53 ++ GWL G R VPSP++D R + E LLVVHNISLPP +FGG I+ LFT Sbjct: 16 VDSGWLSGEGVRHVPSPNFDERQVASPHCDEREAIDLLVVHNISLPPNQFGGEGIEQLFT 75 Query: 54 GTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSI 113 +DP HP++ I L+VSAH L+RRDGE+VQ+VPF KRAWHAG S Y GR++CNDF+I Sbjct: 76 NCLDPSEHPYYEGIYQLKVSAHALVRRDGEVVQFVPFHKRAWHAGQSSYCGRDKCNDFAI 135 Query: 114 GIELEGTDTLAYTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWA 172 GIELEG+D + QY+ L A+T LI YP A+++ GH DIAP RKTDPGP F WA Sbjct: 136 GIELEGSDDQPFEAEQYRALVALTAQLIQTYPQLSAEHIVGHSDIAPGRKTDPGPHFKWA 195 Query: 173 RFRVLVSKETT 183 +R + + Sbjct: 196 DYRKQLKQTLV 206 >UniRef50_Q0AC58 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Gammaproteobacteria RepID=Q0AC58_ALHEH Length = 186 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 99/177 (55%), Positives = 119/177 (67%), Gaps = 1/177 (0%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 G + A + PSP+ D RP L++H ISLPPG FGGPWID LFT + AHP+F Sbjct: 10 SGLIRPAHQHPSPNQDARPAGVAVDALIIHGISLPPGAFGGPWIDRLFTNRLPADAHPYF 69 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 A + LRVS H LIRRDG + QYVP +RAWHAG S+ GRERCNDF+IGIELEGTD Sbjct: 70 ARVHRLRVSCHLLIRRDGALTQYVPLHRRAWHAGQSRLAGRERCNDFAIGIELEGTDETP 129 Query: 125 YTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 YT+AQYQ L + R L+ +P + + GH D+AP RKTDPGPAFDWAR R + Sbjct: 130 YTEAQYQVLGPLCRTLMAAFPGITPERVVGHSDVAPGRKTDPGPAFDWARLRAALHA 186 >UniRef50_D0J795 N-acetylmuramyl-L-alanine amidase, negative n=9 Tax=Proteobacteria RepID=D0J795_COMTE Length = 209 Score = 202 bits (515), Expect = 3e-51, Method: Composition-based stats. Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 2/182 (1%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 + + GW AR++ SP++ RP D L+V+H+ISLPPG++G + LFT +D A Sbjct: 13 LPWQAGWYGAARQLRSPNFGPRPADAQIDLVVIHSISLPPGQYGTGAVQQLFTNQLDWDA 72 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 HP++ I L VS+H I R GEI Q+V D RAWHAGVSQ++GRERCND SIGIELEG Sbjct: 73 HPYYQGIRGLEVSSHFFITRQGEIWQFVSCDDRAWHAGVSQWRGRERCNDDSIGIELEGL 132 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 + L++ QYQ L + A+ YP + + GH IAP RK DPGP FDW R ++ + + Sbjct: 133 EGLSFEAPQYQALQQLCMAIAAHYPV--RYIAGHEHIAPGRKQDPGPGFDWQRLQLQLGR 190 Query: 181 ET 182 Sbjct: 191 AD 192 >UniRef50_A8FQB8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=22 Tax=Gammaproteobacteria RepID=A8FQB8_SHESH Length = 205 Score = 201 bits (512), Expect = 8e-51, Method: Composition-based stats. Identities = 103/176 (58%), Positives = 122/176 (69%), Gaps = 2/176 (1%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GW+ ARR SPH++ RP +LLV+HNISLP G FG +ID LF G +D A F Sbjct: 31 DGWINDARRCESPHFNHRPL-NEVSLLVIHNISLPAGCFGESYIDQLFKGCLDVSADASF 89 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 ++ L VSAH LIRRDGE+VQYV RAWHAGVS Y RE CNDF+IGIELEGTDTLA Sbjct: 90 IDLKGLEVSAHFLIRRDGELVQYVSCGDRAWHAGVSSYGSREGCNDFAIGIELEGTDTLA 149 Query: 125 YTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 YT+ QY++L +T AL D YP + GHCDIAP RKTDPG +FDW RF+ +S Sbjct: 150 YTEQQYRELKILTLALFDAYPMLNIDRVVGHCDIAPGRKTDPGESFDWQRFKKDLS 205 >UniRef50_B3R6P0 N-acetyl-anhydromuranmyl-L-alanine amidase n=3 Tax=Betaproteobacteria RepID=B3R6P0_CUPTR Length = 205 Score = 200 bits (508), Expect = 2e-50, Method: Composition-based stats. Identities = 102/173 (58%), Positives = 123/173 (71%), Gaps = 2/173 (1%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GW+ ARRVPSP++D RPD L+V+HNISLPPG+FG I+A F +DP HPFF Sbjct: 20 DGWVPAARRVPSPNFDARPDGMPVDLVVLHNISLPPGQFGSGDIEAFFQNRLDPDKHPFF 79 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 A I ++VSAH L+ R GE+VQ+VP +RAWHAG S++ GR RCNDFSIGIE+EGTD + Sbjct: 80 ATIHQIQVSAHFLVTRSGELVQFVPCTQRAWHAGQSEFFGRARCNDFSIGIEIEGTDDVP 139 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 +T AQY AA+ RAL YP A + GH DIAP RKTDPGP FDW RF L Sbjct: 140 FTAAQYNTTAALVRALRAAYPVQA--IAGHSDIAPGRKTDPGPHFDWNRFARL 190 >UniRef50_B1XX10 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Proteobacteria RepID=B1XX10_LEPCP Length = 209 Score = 199 bits (506), Expect = 4e-50, Method: Composition-based stats. Identities = 86/178 (48%), Positives = 112/178 (62%), Gaps = 2/178 (1%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 +GW ARRVPSP++ RP + L VVH+ISLPPG +GG I+ FT +DP AHP Sbjct: 13 WSRGWHRDARRVPSPNFGSRPVGASIDLAVVHSISLPPGVYGGDAIERFFTNRLDPAAHP 72 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 +FA +A L+VSAH +IRRDGE++Q+V +RAWHAG S ++GR CND S+GIELEG + Sbjct: 73 YFATLAGLQVSAHFVIRRDGELLQFVDVRERAWHAGASSWRGRSNCNDHSLGIELEGLEG 132 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 + AQY+ LA + R + + GH IAP RK DPG FDW R + Sbjct: 133 QRFEPAQYRVLAGLLRD--ARTAWPLREVVGHEHIAPGRKHDPGAGFDWCRLARHLRG 188 >UniRef50_B2JH28 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=51 Tax=Proteobacteria RepID=B2JH28_BURP8 Length = 212 Score = 198 bits (504), Expect = 7e-50, Method: Composition-based stats. Identities = 95/177 (53%), Positives = 120/177 (67%), Gaps = 3/177 (1%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 + GW+ AR++PSP+++ RP+ PTL+VVHNISLPP EFGGP I LF +D AH Sbjct: 17 VDANGWVDEARQLPSPNFEARPNGARPTLIVVHNISLPPNEFGGPGITDLFLNRLDCDAH 76 Query: 62 PFFAEI-AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 P++ +RVSAH +IRRDG + QYV D+RAWHAG S + GRERCNDFSIGIELEG+ Sbjct: 77 PYYDAHLRDVRVSAHFVIRRDGALEQYVSCDERAWHAGASNFFGRERCNDFSIGIELEGS 136 Query: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 D + AQY LA + R+L Y + + GH DIAP RKTDPGP F+W R + Sbjct: 137 DASPFERAQYATLAPLVRSLAAHYEIDS--LAGHSDIAPGRKTDPGPHFEWPRLQRE 191 >UniRef50_C5TMG7 Protein AmpD n=4 Tax=Neisseriaceae RepID=C5TMG7_NEIFL Length = 199 Score = 195 bits (497), Expect = 5e-49, Method: Composition-based stats. Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 2/176 (1%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 + + G + AR+ SP++ R DE +L+V+HNISLPP E+ ++ LFT I+P H Sbjct: 19 IWQNGRWLNARQTHSPNFSPREPDEDISLVVLHNISLPPFEYNTGAVENLFTNQINPDEH 78 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 PFF+ I LRVS+H I R GE VQ+V D A+HAGVS +QGRE+CN FSIGIELEG D Sbjct: 79 PFFSIIHTLRVSSHFFISRKGETVQFVSCDDMAYHAGVSSFQGREKCNAFSIGIELEGCD 138 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 +T+AQY L A+ A+ + YP A +TGH DIAPDRKTDPG FDW R + Sbjct: 139 FEPFTEAQYTSLQALLTAISEHYPIQA--VTGHQDIAPDRKTDPGHFFDWPRLQKA 192 >UniRef50_UPI0000D5333F negative regulator of AmpC, AmpD n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D5333F Length = 196 Score = 195 bits (496), Expect = 6e-49, Method: Composition-based stats. Identities = 87/176 (49%), Positives = 116/176 (65%), Gaps = 1/176 (0%) Query: 7 WLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAE 66 L + SP+ D R D + P ++V+H ISLPPGE+GG ++ LF ++D +F E Sbjct: 21 LLKNVEYLNSPNQDDRRDGQDPEIIVIHGISLPPGEYGGSYVCDLFLNSLDTSVCEYFKE 80 Query: 67 IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYT 126 I+ L+VS+H I R G ++Q+VPF+ RAWHAG S Y+GRE CN FSIGIELEG D Y+ Sbjct: 81 ISTLKVSSHLFINRLGRVMQFVPFNSRAWHAGESAYRGREMCNHFSIGIELEGQDNDEYS 140 Query: 127 DAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 D QY LA + AL + YP A+++ GH DIAP RKTDPGPAF+W R +S + Sbjct: 141 DIQYVILAKIINALFEFYPRISARDIVGHSDIAPKRKTDPGPAFNWKRLYREISGQ 196 >UniRef50_A4A5I4 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5I4_9GAMM Length = 196 Score = 195 bits (495), Expect = 7e-49, Method: Composition-based stats. Identities = 94/179 (52%), Positives = 113/179 (63%), Gaps = 1/179 (0%) Query: 5 QGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GWL GAR PSP+ + RP P +LVVHNISLPPG FGG ++ALF T+D P F Sbjct: 8 NGWLEGARHCPSPNCNVRPAPWAPDMLVVHNISLPPGRFGGDDVEALFCNTLDCSRDPSF 67 Query: 65 AEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA 124 E+ L VSAH I R+G + Q+V RAWHAGVS + R CNDFSIGIELEGTD A Sbjct: 68 DELRGLEVSAHFFINREGALTQFVSCHDRAWHAGVSTWGSRVNCNDFSIGIELEGTDYQA 127 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKN-MTGHCDIAPDRKTDPGPAFDWARFRVLVSKET 182 Y D QY L+++ L P +A+ + GH DIAP RKTDPG AFDW R R + + Sbjct: 128 YEDMQYAMLSSLIGELRCRMPSLARGPIVGHSDIAPGRKTDPGEAFDWNRLRQGLRSGS 186 >UniRef50_A4SVB0 N-acetylmuramoyl-L-alanine amidase, family 2 n=4 Tax=Proteobacteria RepID=A4SVB0_POLSQ Length = 225 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 88/180 (48%), Positives = 114/180 (63%), Gaps = 6/180 (3%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGP----WIDALFTGTID 57 L EQGWL A+ SP+ D RP++ P LLV+H+ISLPPGEF +I F +D Sbjct: 33 LDEQGWLGFAQWRESPNQDARPENIEPDLLVIHHISLPPGEFKAQDSSQYIIDFFQNRLD 92 Query: 58 PQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117 P HP+FAEI +VS+H LI R G ++Q+V +AWHAG+S + GRE+CNDFSIGIEL Sbjct: 93 PNRHPYFAEIEGQKVSSHFLITRSGRLIQFVSTKHKAWHAGLSSFLGREKCNDFSIGIEL 152 Query: 118 EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 EG + + QY+ L+ L YP + GH DIAP+RKTDPG +FDW RF+ Sbjct: 153 EGDGETPFEEIQYKVLSETVGKLSATYP--SLQFAGHSDIAPERKTDPGISFDWKRFQKE 210 >UniRef50_A9M6A2 Protein ampD n=39 Tax=Proteobacteria RepID=A9M6A2_BRUC2 Length = 268 Score = 191 bits (486), Expect = 9e-48, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 21/181 (11%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 ++LE+ A PSP++ R D + P L++H L + + Sbjct: 15 LVLEKPDYKEAELDPSPNFGPRRDGKQPVFLILHYTGLVTAKEAMDVL------------ 62 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 + + VSAH ++ DG +VQ V RAWHAG S ++G N SIGIE+ Sbjct: 63 -----KSPEMEVSAHYVVHEDGRVVQMVSEKARAWHAGKSFWKGETDINSASIGIEIVNP 117 Query: 121 D----TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + DAQ + + + + + + +N+ H DIAP RKTDPG +F W R Sbjct: 118 GVLENYPPFHDAQIEAVIRLCQDICKRHEIRPENVLAHSDIAPARKTDPGQSFPWKRLHD 177 Query: 177 L 177 Sbjct: 178 A 178 >UniRef50_A6GR52 Putative anhydro-N-acetylmuramyl-tripeptide amidase, AmpD (Negative regulator of AmpC) n=1 Tax=Limnobacter sp. MED105 RepID=A6GR52_9BURK Length = 187 Score = 188 bits (478), Expect = 6e-47, Method: Composition-based stats. Identities = 76/178 (42%), Positives = 92/178 (51%), Gaps = 4/178 (2%) Query: 1 MLLEQGWLVG--ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDP 58 M L++GW+ R+ SP+ D RP LVVH ISLP I LF +D Sbjct: 1 MWLDEGWIEEDWVHRLQSPNQDARPMGTVVDTLVVHCISLPERGRDSALITDLFLNRLDC 60 Query: 59 QAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELE 118 +H F E+ L VS+H LI RDG + Q+V +KRAWHAG+S R N FSIGIEL Sbjct: 61 HSHASFGELIGLHVSSHFLIDRDGSVTQFVSCEKRAWHAGISAAMDRSNFNHFSIGIELL 120 Query: 119 GTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 G + QY L + L YP K H +IAP RKTDPGP FDW R Sbjct: 121 GDIYTPFEQTQYASLKRLALELQARYPL--KYAMAHSEIAPTRKTDPGPFFDWKGLRK 176 >UniRef50_A1AXT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A1AXT9_RUTMC Length = 174 Score = 188 bits (478), Expect = 7e-47, Method: Composition-based stats. Identities = 80/175 (45%), Positives = 114/175 (65%), Gaps = 3/175 (1%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 ++ L +++ SP+++ RP+ + +L+V+H+ISLPPG+F I+ FT +D H Sbjct: 1 MINNHRLENIKQINSPNFNKRPN-QAISLIVIHSISLPPGKFNNNHIEKFFTNQLDTSQH 59 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 P+F I L+VSAH LI+R+G I+Q+VPF++RAWHAG S Y+G+ CNDFSIGIEL+G D Sbjct: 60 PYFKSIKDLKVSAHLLIKRNGMIIQFVPFNQRAWHAGKSNYKGKHNCNDFSIGIELQGDD 119 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 +Y QY+ L V L YP + GH DI+P RKTDPGP F W++ Sbjct: 120 NTSYELVQYKVLNNVIDLLKSHYPI--STIKGHSDISPIRKTDPGPYFKWSKLHA 172 >UniRef50_A6T2C3 Negative regulator of beta-lactamase expression n=2 Tax=Oxalobacteraceae RepID=A6T2C3_JANMA Length = 211 Score = 187 bits (476), Expect = 1e-46, Method: Composition-based stats. Identities = 99/177 (55%), Positives = 125/177 (70%), Gaps = 2/177 (1%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 + GW VGA+ +PSP++D R + LLV+HNISLPPG+FGGP+I LF +D +A Sbjct: 16 IDAAGWAVGAQHLPSPNFDARVEGTEIALLVIHNISLPPGQFGGPFIADLFLNRLDYEAD 75 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 P+F ++ LRVSAH LIRRDG ++Q+V + RAWHAG S + G+ERCNDFSIGIELEGTD Sbjct: 76 PYFDQLRPLRVSAHFLIRRDGTVMQFVSANDRAWHAGASSFCGQERCNDFSIGIELEGTD 135 Query: 122 TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 A+ D QY LAA+T AL YP + ++TGH IAP RKTDPGP FDWA + Sbjct: 136 FEAFADEQYAALAALTVALKAAYPLL--HVTGHEHIAPGRKTDPGPFFDWAGYEERY 190 >UniRef50_A0L5K2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Proteobacteria RepID=A0L5K2_MAGSM Length = 183 Score = 185 bits (471), Expect = 5e-46, Method: Composition-based stats. Identities = 99/167 (59%), Positives = 115/167 (68%), Gaps = 1/167 (0%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 R +PSPH D RP E LLVVH ISLPPG+FGG WID LF G +D QA P+F IA LR Sbjct: 6 RYLPSPHCDERPVGEVVELLVVHAISLPPGQFGGGWIDDLFMGVLDAQADPYFVGIASLR 65 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQ 131 V+AH LI RDG I QYVP KR WHAG S +QGR RCNDFSIG+ELEG + + QYQ Sbjct: 66 VAAHFLIGRDGGITQYVPLSKRGWHAGESVWQGRPRCNDFSIGVELEGDEEHPFAAIQYQ 125 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 +LA +TR L P + + + GH DIAP RK DPG FDW RFR ++ Sbjct: 126 RLAQLTRTLQQRLPRLVE-VVGHQDIAPGRKWDPGRQFDWPRFRAML 171 >UniRef50_A4G8Q1 N-acetylmuramoyl-L-alanine amidase n=4 Tax=Burkholderiales RepID=A4G8Q1_HERAR Length = 185 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 85/156 (54%), Positives = 110/156 (70%), Gaps = 2/156 (1%) Query: 26 ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIV 85 +LLV+HNISLPP +FGGP+I LF +D A P+F ++ LRVSAH LIRRDG ++ Sbjct: 1 MDISLLVIHNISLPPEQFGGPFIADLFLNQLDYAADPYFEQLKLLRVSAHFLIRRDGNVM 60 Query: 86 QYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYP 145 Q+V RAWHAG S + G+ERCNDFSIGIELEGTD + +AQY LA++T AL YP Sbjct: 61 QFVSARDRAWHAGASSFCGQERCNDFSIGIELEGTDFQPFEEAQYIALASLTVALKQAYP 120 Query: 146 DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 ++++GH IAP RKTDPGP F+W ++ L K+ Sbjct: 121 L--RHVSGHEQIAPGRKTDPGPFFNWTEYQALYRKK 154 >UniRef50_Q1QZ97 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ97_CHRSD Length = 197 Score = 180 bits (457), Expect = 2e-44, Method: Composition-based stats. Identities = 106/183 (57%), Positives = 125/183 (68%), Gaps = 6/183 (3%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 WL AR V SP+++ RP+DE + LV+H+ISLPPG FGG I+ LFT +DP AHP+FA Sbjct: 7 HWLTAARHVASPNHNARPEDE-VSALVLHSISLPPGRFGGDAIERLFTNRLDPAAHPYFA 65 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY----QGRERCNDFSIGIELEGTD 121 I LRVSAH LIRRDGE VQ+V FD+RAWHAG S++ + R NDFSIGIELEG + Sbjct: 66 TIHALRVSAHVLIRRDGEAVQFVGFDRRAWHAGRSRWWDGHRERRELNDFSIGIELEGDE 125 Query: 122 TLAYTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 AY +AQY+ LA V AL YP +T H IAP RKTDPGPAFDWA FR V Sbjct: 126 IHAYREAQYRCLARVFLALHARYPALTLARVTSHARIAPLRKTDPGPAFDWAYFRQCVQA 185 Query: 181 ETT 183 TT Sbjct: 186 LTT 188 >UniRef50_A3HXI6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HXI6_9SPHI Length = 299 Score = 175 bits (444), Expect = 6e-43, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 21/163 (12%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 V + ++ R P +++H+ + E + + Sbjct: 65 EWVGTTNFSIRR----PNFVIIHHTAQDSLEQTIRTFT-----------------LPRTQ 103 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQ 131 VS+H +I +DG IVQ + R+WHAG ++ N SIGIEL+ + +AQ + Sbjct: 104 VSSHYVIAKDGTIVQMLNDYLRSWHAGRGKWGSVTDLNSVSIGIELDNNGFEPFPEAQIE 163 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L + + L Y N GH DIAP RK DP F W + Sbjct: 164 SLLILCKRLKWKYGIPTANFIGHSDIAPSRKVDPNRFFPWDQL 206 >UniRef50_B9NMR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NMR2_9RHOB Length = 227 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 17/165 (10%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 PSP++ R D PTL+V+H ++ + + V Sbjct: 11 WHPSPNFGPRRDGLKPTLIVLHYTAMHSADDALERLCD-----------------PAHEV 53 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 SAH LI RDG + Q V RAWHAG ++ G+ N SIGIEL+ T + Q Sbjct: 54 SAHYLIGRDGTLWQLVHEPDRAWHAGAGEWHGQTDINSRSIGIELDNAGTHPFAAPQMSA 113 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 L + ++ + + + GH D+AP RK DPGP FDW R Sbjct: 114 LDHLLPDIMGRWNIPPQGVIGHSDMAPGRKIDPGPKFDWQRLERQ 158 >UniRef50_Q093H8 Negative regulator of beta-lactamase expression n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q093H8_STIAU Length = 280 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 23/176 (13%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 PSP+++ R + +V+H+ + G + Sbjct: 123 PPVTSAPSPNFNER-GGKDIDTIVLHHTASNNGAGDLAHMR-----------------NP 164 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR-ERCNDFSIGIELEGTDTL--AY 125 VSAH ++ RDG+I Q V KRAWHAG S+ G N SIGIE+ + A+ Sbjct: 165 ASEVSAHYMVDRDGKIYQLVNDSKRAWHAGKSELHGVPTDVNSRSIGIEIVNDGSGKTAF 224 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWARFRVLVS 179 T+AQY+ L + L + N+ GH D+A RK DP FDW R R +S Sbjct: 225 TEAQYKSLTQLVGYLKQEHGVPMNNIVGHKDVAVPKGRKNDPASNFDWNRLRTGIS 280 >UniRef50_Q1DDM5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DDM5_MYXXD Length = 203 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 23/176 (13%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 PSP+ + R +V+H+ + G W+ Sbjct: 46 PAVINAPSPNQNSR-GGTKIDTIVMHHTATNNGAGDLSWMR-----------------NP 87 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR-ERCNDFSIGIELEGTDTL--AY 125 +VSAH ++ RDG+I Q V DKRAWHAG + G N+ SIGIE+ + + Sbjct: 88 QSKVSAHYMVDRDGKIYQLVGDDKRAWHAGKGELHGVPSDINNRSIGIEIVNDGSGKTPF 147 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWARFRVLVS 179 T+AQY+ L +T L + KN+ GH D+A RK DP P FDW R R +S Sbjct: 148 TEAQYKSLTQLTGYLKQQHNIPMKNIVGHADVAVPKGRKNDPAPNFDWNRLRKGIS 203 >UniRef50_D0CW21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CW21_9RHOB Length = 418 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 57/165 (34%), Positives = 80/165 (48%), Gaps = 17/165 (10%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 PSP++ R D P+L+V+H ++ A DP++ V Sbjct: 202 WHPSPNFGPRRDGLKPSLVVLHYTAMNSA-------RAALERLCDPES----------EV 244 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 SAH LI DG + Q V + RAWHAGV ++QG+ N SIGIEL+ + AQ + Sbjct: 245 SAHYLIGCDGTLWQMVREEDRAWHAGVGEWQGQSDINSRSIGIELDNRGDHPFAQAQIRV 304 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 L + ++ + A + GH D+AP RK DPGP FDW R Sbjct: 305 LERLLPQIMTRWSIPAAGVIGHSDMAPGRKHDPGPRFDWLRLERQ 349 >UniRef50_Q2RVT4 AmpD (Negative regulator of AmpC) n=2 Tax=Rhodospirillaceae RepID=Q2RVT4_RHORT Length = 241 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 77/163 (47%), Gaps = 21/163 (12%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 SP+ D RP + +LV+H +P + + +VSAH Sbjct: 17 SPNADDRPPGQIIDMLVIHYTGMPSAQAALARLLD-----------------PQAQVSAH 59 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQYQ 131 LI DG + V +RAWHAGVS + GR N SIGIEL + +AQ Sbjct: 60 WLIDEDGTAYKLVEERRRAWHAGVSAWGGRPGVNARSIGIELVNPGHEFGYRPFPEAQMT 119 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L A+ R +++ +P A ++ GH D+AP RK DPG FDW R Sbjct: 120 TLIALGRGILERHPIPAAHVVGHADVAPTRKEDPGELFDWQRL 162 >UniRef50_Q28T26 Negative regulator of AmpC AmpD n=39 Tax=Rhodobacterales RepID=Q28T26_JANSC Length = 227 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 17/167 (10%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 A+ + SP++ R D P L+V+H ++P + Sbjct: 3 AKSLQSPNFGPRRDGLKPELVVIHYTAMPNCASAAKVLCD-----------------PAR 45 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQY 130 VSAH LI RDG+++ VP D RAWHAG +++G N SIGIEL+ +++ Sbjct: 46 EVSAHYLIGRDGDVLNLVPEDMRAWHAGKGEWRGAGDVNSRSIGIELDNDGLTPFSEPLM 105 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 L + ++ + + GH D+AP RK DPG FDW R Sbjct: 106 AALETLLPTVLAAWRIGPDGVIGHSDMAPGRKIDPGRRFDWQRLARQ 152 >UniRef50_B6IRH2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodospirillum centenum SW RepID=B6IRH2_RHOCS Length = 254 Score = 171 bits (434), Expect = 8e-42, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 21/168 (12%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 +PSP++ R +LV+H + E + VS Sbjct: 9 LPSPNHGPRRPGAAIDMLVLHYTGMRTAEEALERLCD-----------------PAAEVS 51 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQ 129 AH +I DG + + V D+RAWHAG+S ++G N SIGIEL + +AQ Sbjct: 52 AHYVIDEDGTLYRLVREDRRAWHAGLSFWRGERDVNSRSIGIELVNPGHAFGYRPFPEAQ 111 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 L ++ L+ Y ++ GH D+AP RK DPG FDW R Sbjct: 112 MATLESLAADLVAHYRIPPLHVLGHSDVAPARKEDPGELFDWPRLARA 159 >UniRef50_A5V2C7 N-acetylmuramoyl-L-alanine amidase, family 2 n=6 Tax=Sphingomonadales RepID=A5V2C7_SPHWW Length = 241 Score = 169 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 23/174 (13%) Query: 8 LVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 + PSP++D R T+LV+H + + Sbjct: 4 MDEIIDCPSPNHDER--TLPITMLVLHYTGMADAASAIARLTD----------------- 44 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL---- 123 +VS+H L+ DG++++ VP D+RAWHAG S ++G N SIGIE+ Sbjct: 45 PEAKVSSHYLVAEDGQVMRLVPEDRRAWHAGQSSWRGVTDVNSASIGIEIVNPGHELGYR 104 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 + Q L + + +P N+ GH D+AP RK DPG FDW L Sbjct: 105 PFPKPQMDALIPLISDITSRHPIEPANVVGHSDVAPRRKQDPGELFDWELLGKL 158 >UniRef50_A5FA27 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Bacteroidetes RepID=A5FA27_FLAJ1 Length = 301 Score = 168 bits (426), Expect = 8e-41, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 21/166 (12%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 + + +++ R P+ +++H+ + + T + Sbjct: 87 EWIGTVNFNLR----KPSFVIIHHTAQDSLQQTINTFTKTRT-----------------Q 125 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQ 131 VS+H +I +G++VQ + RAWHAG S + N SIGIEL+ +T+AQ Sbjct: 126 VSSHYIISENGKVVQMLNDYLRAWHAGNSTWGKNTDLNSSSIGIELDNNGFKPFTEAQIS 185 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 L A+ L Y +N GH DIAP RK DP F W Sbjct: 186 SLVALLTKLKKDYNIPTQNFLGHADIAPGRKQDPSALFPWKTLAEK 231 >UniRef50_B0T844 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=6 Tax=Alphaproteobacteria RepID=B0T844_CAUSK Length = 243 Score = 168 bits (426), Expect = 9e-41, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 23/172 (13%) Query: 10 GARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 G PSP++D R P +V+H + GE + Sbjct: 6 GFVDAPSPNFDAR--KSVPDCVVLHYTGMETGEAALARMCD-----------------PE 46 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AY 125 +VSAH ++ DG + + VP ++RAWHAG + ++G + N SIG+E+ + Sbjct: 47 AKVSAHYMVEEDGRVFRLVPEERRAWHAGAAFWKGVKDINSASIGVEIVNPGHEFGYRPF 106 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 DAQ + + + + + GH DIAP RK DPG F W R Sbjct: 107 PDAQVAAVINLLADIRSRWTIDDDRILGHSDIAPGRKIDPGELFPWKRLAQA 158 >UniRef50_C7D9N0 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D9N0_9RHOB Length = 237 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 PS ++ R + P+L+V+H ++ + W+ +VS Sbjct: 17 HPSQNFGPRRNGLRPSLIVLHYTAMNDADGACRWLC-----------------NPESQVS 59 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQL 133 +H ++ G + V RAWHAG + G + N SIGIE+ T + AQ + Sbjct: 60 SHYVVTEVGAVWSLVEEADRAWHAGAGTWGGLDDINSRSIGIEISNAGTHGFAAAQMDAV 119 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 A+ ++D + A+ + GH D AP RK DPG FDW R Sbjct: 120 EALVAGIMDRWDIPAEGVIGHSDFAPGRKIDPGGRFDWRRL 160 >UniRef50_C6XXC7 N-acetylmuramoyl-L-alanine amidase family 2 n=3 Tax=Sphingobacteriaceae RepID=C6XXC7_PEDHD Length = 276 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 69/165 (41%), Gaps = 22/165 (13%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 V S ++ R P +V+H+ + I +V Sbjct: 65 WVGSVNFGIR----KPNFVVLHHTAQDSSAQTLKTFT-----------------ITRTQV 103 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S+H +I RDG++ Q V RA HAGVS++ N SIGIE++ Y++ Q + Sbjct: 104 SSHYVIGRDGKVFQMVNDYLRANHAGVSRWGNEMDLNSSSIGIEIDNNGKEPYSEVQIKS 163 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 L V RAL Y N GH DIAP RK DP F W R Sbjct: 164 LITVLRALKKRYGIPTANFIGHADIAPGRKNDP-RNFPWKRMAAE 207 >UniRef50_B6JBX5 Negative regulator of AmpC, AmpD n=3 Tax=Alphaproteobacteria RepID=B6JBX5_OLICO Length = 273 Score = 165 bits (417), Expect = 8e-40, Method: Composition-based stats. Identities = 52/167 (31%), Positives = 73/167 (43%), Gaps = 23/167 (13%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 SP+ D R L+V+H +P + + A +VS+ Sbjct: 37 ASPNLDERCAP--VELIVLHYTGMPEEDAALARLCD-----------------AEAKVSS 77 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQY 130 H ++R +GE+VQ V +KRAWHAGVS ++G N SIGIE+ Y D Q Sbjct: 78 HYVVRENGEVVQLVAEEKRAWHAGVSCWRGASDINSRSIGIEIVNPGHDGDCPPYPDPQI 137 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 + A+ R ++ + H DIAP RK DPG F W R Sbjct: 138 AAVIALCRDILARNGIRRDQVLAHSDIAPTRKQDPGEWFPWGRLAAE 184 >UniRef50_A8TR24 Negative regulator of beta-lactamase expression n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR24_9PROT Length = 247 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 21/173 (12%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 PSP++ RP +L++H + E + Sbjct: 5 PTVIEHPSPNHGPRPVGAPIDILLLHYTDMTRAEDALDRMCD-----------------P 47 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----A 124 +VSAH L+ DG + + V D+RAWHAGVS + G N SIGIE+ Sbjct: 48 AAQVSAHYLVGEDGRVWRMVAEDRRAWHAGVSWWDGDSDINSRSIGIEISNPGHSHGYRP 107 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 + D Q L ++ R ++ +P A + GH D++P RK DPG FDW Sbjct: 108 FPDVQMSALESLCRGILARHPIPANRVLGHSDVSPGRKIDPGHLFDWHWLASR 160 >UniRef50_C6XME2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XME2_HIRBI Length = 236 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 23/166 (13%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 + PS ++D R ++LV+H + G+ + +V Sbjct: 10 QAPSVNFDERRQPL--SMLVLHYTGMQTGQAALGRMCD-----------------PEAKV 50 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDA 128 +AH ++ DG I Q V KRAWHAGV ++G + N SIGIE+ + + Sbjct: 51 AAHYMVEEDGRIFQLVDESKRAWHAGVGTWRGLDDINSRSIGIEIVNGGHDYGLPDFPEI 110 Query: 129 QYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 Q + A+ R ++ + + ++ GH DIAP RK DPG F W + Sbjct: 111 QIDAVIALCRDVLSRHQILQSDIVGHSDIAPGRKDDPGEKFPWEKL 156 >UniRef50_Q07PU2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=33 Tax=Alphaproteobacteria RepID=Q07PU2_RHOP5 Length = 294 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 69/165 (41%), Gaps = 21/165 (12%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 +PSP++ R P ++V+H +P E VS Sbjct: 42 IPSPNFGDRNKGRAPDMIVLHYTGMPDVEGALA-----------------RLCQDGTEVS 84 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA----YTDAQ 129 AH ++ DG IVQ VP KRAWHAG++ + G E N SIGIE+ + Q Sbjct: 85 AHYVVLEDGRIVQCVPEAKRAWHAGLAFWAGEEDINSCSIGIEIVNRGHDWGYPDFPLRQ 144 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + A+ R +I + H D+AP RK DPG F W Sbjct: 145 VAAVIALCRGIIIRRGIQPHRVLAHSDVAPARKQDPGEKFPWRAL 189 >UniRef50_Q0BV14 Anhydro-N-acetylmuramyl-tripeptide amidase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BV14_GRABC Length = 250 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 26/178 (14%) Query: 8 LVGARRVPSPHYDCRPD-----DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 + R PSP+YD RP +LV+H + + Sbjct: 8 MPPIRERPSPNYDARPSATAGTPGAVDMLVLHYTGMTSAAAAIDRLCD------------ 55 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 RVS+H ++ DG + + V RAWHAG+S ++GR NDFS+GIE+ Sbjct: 56 -----PEARVSSHYVVEEDGTVWRLVWEQYRAWHAGISHWRGRSWLNDFSVGIEIVNPGH 110 Query: 123 LA----YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + +AQ + + A+ A++ + A ++ H DIAPDRK DPG FDW Sbjct: 111 EWGYRAFPEAQMRSVLALAHAIVRQHSIPAAHIVAHSDIAPDRKQDPGELFDWRWLAQ 168 >UniRef50_B2IHS0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=26 Tax=Alphaproteobacteria RepID=B2IHS0_BEII9 Length = 304 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 73/168 (43%), Gaps = 22/168 (13%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 PSP++ R P +++H+ ++ GE A DP A VS Sbjct: 27 HPSPNHGDR-KGRQPDAIILHHTAMVSGE-------AALLRLCDPAA----------EVS 68 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQ 129 AH L+ DG I Q V RAWHAG S + G N SIGIEL Y +AQ Sbjct: 69 AHYLVWEDGRISQLVAEKHRAWHAGQSYWAGERDMNSVSIGIELVHPGPEGGSPPYEEAQ 128 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 A+ ++ A + GHCDIAPDRK DP F WA+ Sbjct: 129 IAATIALCLDIMRRRSIPAARVLGHCDIAPDRKDDPSAHFPWAQLAAA 176 >UniRef50_C6QHF6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QHF6_9RHIZ Length = 256 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 54/174 (31%), Positives = 77/174 (44%), Gaps = 22/174 (12%) Query: 8 LVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 LVG+ RV +++ R P+LL++H + E W+ + Sbjct: 9 LVGSVRVAE-NHEPRRGGVRPSLLILHYTGMSSAEKAIDWLARAESN------------- 54 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL---- 123 VS H +I DG I Q VP RAWHAG S ++G N SIGIE++ Sbjct: 55 ----VSCHYVIDEDGRITQLVPESLRAWHAGASFWRGETDINSHSIGIEIQNPGHQHGYP 110 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 + AQ Q + A+ + + + A + H DIAP RK DPG F+WA Sbjct: 111 DFPAAQMQAVIALGKDIAQRHRMAADAVLAHSDIAPGRKIDPGEKFNWALLARQ 164 >UniRef50_Q4FPN2 Probable N-acetylmuramoyl-L-alanine amidase n=2 Tax=Candidatus Pelagibacter ubique RepID=Q4FPN2_PELUB Length = 247 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 22/166 (13%) Query: 16 SPHYDCR-PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 SP+++ + + ++ H + VS Sbjct: 10 SPNFNPKKRTSKQIKFIIFHYTGMKSESDALK-----------------RLTEIQSEVSC 52 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQY 130 H LI+ +GEIV+ VP AWHAG S ++ + N SIGIE+ +T Q Sbjct: 53 HYLIKNNGEIVKIVPDLYIAWHAGKSSWKNYKSLNQNSIGIEITNPGHEYGYKNFTQKQI 112 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 L +++ LI Y KN+ GH DIA RK DPG F W Sbjct: 113 TTLVKLSKFLIKKYKINPKNILGHSDIAVLRKKDPGEKFPWEYLAK 158 >UniRef50_B6BSD7 Probable N-acetylmuramoyl-L-alanine amidase YbjR n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BSD7_9RICK Length = 248 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 22/164 (13%) Query: 16 SPHYD-CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 SP++D + + ++ H + + +VS+ Sbjct: 13 SPNFDVKKRRVKEVKFIIFHYTGM-----------------KKENQAITRLTNSKSKVSS 55 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----AYTDAQY 130 H LI+ +GEI+ VP AWHAG+S ++ + N +SIGIE+ ++ Q Sbjct: 56 HYLIKNNGEILTLVPDLYVAWHAGISSWKNYKSINKYSIGIEISNPGHEYSYKKFSKEQV 115 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 + + ++ LI Y + GH DIAPDRK DPG F W Sbjct: 116 KSIIKLSTYLIKKYNIKPNFILGHSDIAPDRKKDPGEKFPWKYL 159 >UniRef50_Q0F4W8 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0F4W8_9RHOB Length = 238 Score = 155 bits (393), Expect = 6e-37, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 20/165 (12%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 + PSP++ R P+++V+H ++ + + V Sbjct: 9 QQPSPNFGIRRGGVIPSMIVLHYTAMKSSKDAIQRLSD-----------------PKSEV 51 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL--AYTDAQY 130 SAH LI G++ Q V KRAWHAG + N +SIGIEL+ + + + Q Sbjct: 52 SAHYLIDEAGKVTQLVDEQKRAWHAGQGCWGEINDINSYSIGIELDYCPSAKCNFDERQI 111 Query: 131 QQLAAVTRALIDCY-PDIAKNMTGHCDIAPDRKTDPGPAFDWARF 174 L + ++ + + H D+AP RK DPG F W + Sbjct: 112 SSLEKLLFDILKRRSEIRPEFIIAHSDMAPGRKFDPGMYFPWKKL 156 >UniRef50_Q4ZZT4 N-acetylmuramoyl-L-alanine amidase, family 2 n=10 Tax=Pseudomonas RepID=Q4ZZT4_PSEU2 Length = 283 Score = 155 bits (391), Expect = 9e-37, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 72/175 (41%), Gaps = 36/175 (20%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 PS ++D R +V+H S + H VS Sbjct: 50 HPSVNFDGRAQ-----YVVMHYTST--------------------SLEHSLQLLTHGEVS 84 Query: 74 AHCLIRRD--GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---------T 122 AH LI D I + V + RAWHAG S+++GR N SIGIE+ Sbjct: 85 AHYLIGDDSKATIYKLVDENARAWHAGESEWEGRTWLNSSSIGIEIVNPGFKETPTGRLW 144 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 YT+AQ Q + + + ++ K++ GH DIAP RK DPGP F W R Sbjct: 145 YPYTEAQTQSIIVLLKDIVKRNRIDPKHIIGHSDIAPLRKQDPGPLFPWKRLAAE 199 >UniRef50_C7PRR2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PRR2_CHIPD Length = 275 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 21/169 (12%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 + + +++ R P +++H+ + + + Sbjct: 56 TAVNWIGTTNFNLR----KPNYVIIHHTAQGSCDTTFNTFT-----------------LP 94 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDA 128 +VSAH +I +DG I + RAWHAG++++ N SIGIEL+ + Sbjct: 95 RTQVSAHYVICKDGTINHMLNDYLRAWHAGIAKWGNVTDMNSCSIGIELDNNGLTPFQPQ 154 Query: 129 QYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 Q L + +L + A N GH DIAP RK DP F W + Sbjct: 155 QINSLLVLLDSLKHRFNIPAANFIGHGDIAPGRKVDPSAWFPWQQLAEK 203 >UniRef50_Q3BNF4 N-acetylmuramoyl-L-alanine amidase n=14 Tax=Xanthomonadaceae RepID=Q3BNF4_XANC5 Length = 268 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 53/167 (31%), Positives = 69/167 (41%), Gaps = 19/167 (11%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 A+ VPSP+YD R P L+V+H + + Sbjct: 37 AQWVPSPNYDTRR----PILIVLHFTDQQSVRQSLSTLR---------------GRNSGG 77 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQY 130 RVSAH LI DG+ Q V +RAWH G ++ N SIGIEL+ + + AQ Sbjct: 78 RVSAHYLIGEDGQRYQLVSDGQRAWHGGAGRWGTITDINSASIGIELDNDGSEPFAPAQI 137 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 L + L + GH D+AP RK DPGP F W R Sbjct: 138 DSLLVLLDDLCQRLRIPRTQIVGHEDVAPTRKNDPGPLFPWKRLADA 184 >UniRef50_C9MVU9 N-acetylmuramoyl-L-alanine amidase domain protein n=2 Tax=Leptotrichia RepID=C9MVU9_9FUSO Length = 322 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 27/168 (16%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 Y + + +++H ++ + + VSAH LI Sbjct: 87 YSSKGQNYRQRFIILHYTAM--------------------DRDGSLRALTNNEVSAHYLI 126 Query: 79 R--RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT-----LAYTDAQYQ 131 ++ + V ++RAWHAG S+++ + ND SIGIE+ + + D Q + Sbjct: 127 SNQKNDPVFYLVDENRRAWHAGASEWKTSKNLNDSSIGIEIVNSGNVSGSFEPFRDFQIK 186 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 +A + + L D Y A N+ GH DIAP RK DPGP F W + Sbjct: 187 DVAVLVKYLADKYEIPATNILGHSDIAPQRKPDPGPLFPWEELYRKYN 234 >UniRef50_C5BFW7 N-acetylmuramoyl-L-alanine amidase AmiD n=14 Tax=Enterobacteriaceae RepID=C5BFW7_EDWI9 Length = 294 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 76/182 (41%), Gaps = 37/182 (20%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 S + +E LV+H ++ + +V Sbjct: 42 YFASHAFTAVGQNERIRFLVLHYTAVDDVS--------------------SLNILTKEQV 81 Query: 73 SAHCLIRRD-----GE--IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---- 121 SAH LI ++ G+ ++Q V +KRAWHAG+S + GR ND SIGIE+ Sbjct: 82 SAHYLIPKEPKSIHGQPVVLQLVDENKRAWHAGISSWNGRSGLNDTSIGIEIVNLGYTDN 141 Query: 122 ------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 YT+ Q +AA+ + +++ Y N+ GH DIAP RK DPG F W Sbjct: 142 MLGQRTWYPYTEKQIAAVAALAKDIVNRYHIEPDNVVGHSDIAPLRKQDPGKLFPWEHLA 201 Query: 176 VL 177 + Sbjct: 202 AM 203 >UniRef50_A7FHD3 N-acetylmuramoyl-L-alanine amidase, family 2 n=28 Tax=Enterobacteriaceae RepID=A7FHD3_YERP3 Length = 283 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 79/192 (41%), Gaps = 41/192 (21%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 L+++G PS + R LV+H ++ E Sbjct: 27 LIDRGAYQIDTHYPSVAKNER-----VRFLVLHYTAVDDAE------------------- 62 Query: 62 PFFAEIAHLRVSAHCLIRR-----DGEIV--QYVPFDKRAWHAGVSQYQGRERCNDFSIG 114 + VSAH LI G+ + Q VP +RAWHAGVS +QGR ND SIG Sbjct: 63 -SLRLLTQGEVSAHYLIPTHPKKAGGKAIALQLVPEAQRAWHAGVSSWQGRNNLNDTSIG 121 Query: 115 IELEGTD---------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 IE+ Y ++Q + + +T+ ++ Y ++ H DIAP RK+DP Sbjct: 122 IEIVNLGFTEKMLGRTWYPYNESQIELIEQLTKDIVQRYNISPSDVVAHSDIAPLRKSDP 181 Query: 166 GPAFDWARFRVL 177 GP F W R Sbjct: 182 GPLFPWKRLAEK 193 >UniRef50_C0YHQ4 Possible N-acetylmuramoyl-L-alanine amidase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YHQ4_9FLAO Length = 319 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 32/168 (19%) Query: 24 DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG- 82 + L++H +LP + VSAH L+ G Sbjct: 79 QNFRQRYLILHYTALPD--------------------DKSITVLTQQAVSAHYLVNNTGD 118 Query: 83 -EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL----------AYTDAQYQ 131 EI Q V +KR++HAGVS ++ + ND SIGIE+ T ++D Q + Sbjct: 119 NEIYQLVDENKRSYHAGVSAWRNDKNLNDTSIGIEIVNTGYTTDATGKRTFAPFSDDQVK 178 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 ++AA+ + ++ Y N+ GH DIAP RK DPGP F W + Sbjct: 179 KVAALVKDIVTRYQIQPTNVLGHSDIAPTRKQDPGPMFPWKKLYDEYQ 226 >UniRef50_A3VV46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VV46_9PROT Length = 238 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 64/172 (37%), Gaps = 22/172 (12%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 V +PSP+Y R TL+V+H +P E + Sbjct: 3 VPIEDLPSPNYSSREGT-PITLVVLHYTGMPSAEEALDRLRD-----------------P 44 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT----LA 124 VS+H I +DG IV+ V RA HAG+ + N SIGIE+ Sbjct: 45 EAGVSSHYFIEQDGRIVRLVDEKDRAHHAGLGAWGPVRDVNSASIGIEIVNKGHLWGYED 104 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + D Q L + + + H D+AP RK DPG F W R Sbjct: 105 FPDLQIDALIGLMTEIYRRHRLGPLAAIAHSDLAPARKDDPGERFPWDRLAA 156 >UniRef50_C2G1S0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Sphingobacterium spiritivorum RepID=C2G1S0_9SPHI Length = 297 Score = 150 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 69/174 (39%), Gaps = 21/174 (12%) Query: 4 EQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 ++G V + H+D R P +++H+ + + T Sbjct: 76 QKGMRKDLDWVGAIHFDIR----KPNYVIIHHTAQDSLKQTLRTFTLEHT---------- 121 Query: 64 FAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 +VSAH LI + GE+ Q + R WHAG S++ N S+GIEL+ Sbjct: 122 -------KVSAHYLIGKKGEVYQLLNDYLRGWHAGASKWGSVTDMNSVSLGIELDNNGRE 174 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 ++D Q L + L Y N GH DIAP RK DP F W + Sbjct: 175 PFSDVQINALLTLLDTLKTNYDIPTANFIGHGDIAPTRKNDPSIFFPWKKLAER 228 >UniRef50_A1V4B3 N-acetylmuramoyl-L-alanine amidase domain protein n=59 Tax=Proteobacteria RepID=A1V4B3_BURMS Length = 314 Score = 150 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 68/192 (35%), Gaps = 41/192 (21%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 L+ +G +P+ R D LV+H + Sbjct: 40 LVNRGDYYADTSLPA-----RSADSRIRFLVMHYTEIGEA-------------------- 74 Query: 62 PFFAEIAHLRVSAHCLIRRDGE-------IVQYVPFDKRAWHAGVSQYQGRERCNDFSIG 114 P + VSAH ++ + Q VP +RAWHAGVS +QG N SIG Sbjct: 75 PSLRVLTQENVSAHYVVPDAPRTERGAPVVYQLVPESERAWHAGVSAWQGATELNGVSIG 134 Query: 115 IELEGTD---------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 IE Y AQ + + + ++ Y + GH DIAP RK DP Sbjct: 135 IENVNRGPIDTPHGRMWAPYPPAQVDAIVRLAKDIVARYRIPPTRVVGHSDIAPQRKIDP 194 Query: 166 GPAFDWARFRVL 177 GP F W Sbjct: 195 GPLFPWRALAKA 206 >UniRef50_C7NA60 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Fusobacteriaceae RepID=C7NA60_LEPBD Length = 316 Score = 148 bits (374), Expect = 7e-35, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 27/168 (16%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 Y + + +++H ++ + VS+H L+ Sbjct: 82 YTSKGQNYRQRFIILHYTAV--------------------NRDGSLRALTGNDVSSHYLV 121 Query: 79 R--RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT-----LAYTDAQYQ 131 ++ + V +KRAWHAG S+++ + ND SIGIE+ + D Q + Sbjct: 122 SDQKNDPVFYLVDENKRAWHAGASEWKTTKNLNDSSIGIEIVNNGDVSGRFEPFKDFQIK 181 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 ++A + R LID Y N+ GH DIAP RK DPGP F W + Sbjct: 182 EVAVLVRHLIDKYEIPPTNILGHSDIAPQRKPDPGPLFPWEELNKKYN 229 >UniRef50_D2AU78 N-acetylmuramoyl-L-alanine amidase n=5 Tax=Bacteria RepID=D2AU78_STRRD Length = 508 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 78/186 (41%), Gaps = 35/186 (18%) Query: 7 WLVGARRVP--SPHY--DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 GA+ V S +Y RP +V+H Sbjct: 213 DYPGAKWVAASSSNYTVSNRPTSNAIDRIVIHVT------------------QGSYAGTI 254 Query: 63 FFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-- 119 + + +VSAH ++R DG++ Q V RAWHA N S+GIE EG Sbjct: 255 SWFQNPAAQVSAHYVVRSSDGDVTQMVREKDRAWHA--------RDWNSRSVGIEHEGYV 306 Query: 120 TDTLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 D +TDA Y+ AA+TR + D Y ++ GH ++ + TDPGP +DW R+ Sbjct: 307 NDASWFTDAMYRSSAALTRNIADRYGIPKDRAHIVGHVEVPGNDHTDPGPNWDWTRYMQY 366 Query: 178 VSKETT 183 V+ TT Sbjct: 367 VNGTTT 372 >UniRef50_Q3JK19 N-acetylmuramoyl-L-alanine amidase domain protein n=8 Tax=Proteobacteria RepID=Q3JK19_BURP1 Length = 454 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 72/192 (37%), Gaps = 43/192 (22%) Query: 8 LVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 R + SP+ D R LV+H + + Sbjct: 169 YTIDRSIQSPNQDSR-----VRTLVLHYTAQTLADSIASL------------------TS 205 Query: 68 AHLRVSAHCLI---RRDGE---IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 +VSAH L+ DG + + VP +RAWHAGVS +QG N S+GIE+ Sbjct: 206 PQRQVSAHYLVPDAADDGRRFKVFELVPQARRAWHAGVSYWQGDRMLNAGSVGIEIVNLG 265 Query: 122 --------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGP 167 Y DAQ A+ ++ + + + GH D+AP RKTDPGP Sbjct: 266 FPPEDENLPLMNRRWYPYPDAQVAVFGALAADVVAQHQVLPHKVVGHSDVAPGRKTDPGP 325 Query: 168 AFDWARFRVLVS 179 F W + Sbjct: 326 LFPWKKLYDQYK 337 >UniRef50_C9Y7L0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase ampD n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7L0_9BURK Length = 196 Score = 145 bits (366), Expect = 7e-34, Method: Composition-based stats. Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 27/173 (15%) Query: 3 LEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 + GW A+ VPSP++ RP L+V+H+ISLPPG +GGP + LFT T+D AHP Sbjct: 29 WDAGWWSEAQHVPSPNFGPRPASAVVDLVVIHSISLPPGVYGGPEVQQLFTNTLDWDAHP 88 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 WHAG S Y+ R+ CND SIGIELEGT+ Sbjct: 89 XXXXXXX-------------------------WHAGKSCYRDRDHCNDDSIGIELEGTEE 123 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 +T QY+ L + RA+ Y + + GH IAP RKTDPGP F+W+ + Sbjct: 124 DRFTPPQYESLHRLCRAIAQNYQI--QYLAGHEHIAPGRKTDPGPGFEWSELK 174 >UniRef50_A4VRS8 N-acetylmuramoyl-L-alanine amidase family protein n=19 Tax=Proteobacteria RepID=A4VRS8_PSEU5 Length = 262 Score = 145 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 64/170 (37%), Gaps = 31/170 (18%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 + D +V+H S ++ VS+H LI Sbjct: 26 HSSIGHDSRVQFIVLHYTST--------------------DLPRSLELLSGRDVSSHYLI 65 Query: 79 RRD-GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD----------TLAYTD 127 I + V D+RAWHAG S++ GR N SIGIEL Y+ Sbjct: 66 GESPATIYRLVDEDRRAWHAGESEWNGRTWLNATSIGIELVNQGYEQSADGRRLWYPYSQ 125 Query: 128 AQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 AQ L + + ++ + + GH DIAP RK DPGP F W R Sbjct: 126 AQIDALVVLLKDIMARHGLKPGAIIGHSDIAPQRKVDPGPLFPWKRLAEE 175 >UniRef50_D1P770 N-acetylmuramoyl-L-alanine amidase, family 2 n=3 Tax=Providencia RepID=D1P770_9ENTR Length = 295 Score = 145 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 73/191 (38%), Gaps = 43/191 (22%) Query: 7 WLVGARRVPS-------PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQ 59 LVG PS + R E +V+H Sbjct: 12 LLVGCSTTPSKTGYFLDQSHPSRNTSERIQYIVLHYTVSDDAH----------------- 54 Query: 60 AHPFFAEIAHLRVSAHCLIR-----RDGE--IVQYVPFDKRAWHAGVSQYQGRERCNDFS 112 + +VS+H LI ++G+ I+Q VP +AWHAG S++Q ND S Sbjct: 55 ---SIKILTKGKVSSHYLIPSQPEQKNGQPVILQLVPERLKAWHAGDSRWQYHHSLNDNS 111 Query: 113 IGIELEGTD---------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKT 163 IGIE+ + D+Q L + ++ Y +N+ GH DIAP RK Sbjct: 112 IGIEIVNEGLVRKNGQDIWQPFNDSQIDALIPLLSDIMQRYGIPPENVIGHSDIAPLRKQ 171 Query: 164 DPGPAFDWARF 174 DPG AF W Sbjct: 172 DPGRAFPWQAL 182 >UniRef50_A9KGI9 Anhydro-N-acetylmuramyl-tripeptide amidase n=16 Tax=Proteobacteria RepID=A9KGI9_COXBN Length = 257 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 73/178 (41%), Gaps = 37/178 (20%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 P+ ++D R LV+H + + F VS Sbjct: 9 YPAKNFDKR-----IRFLVLHYTAKNFEDSLEILTQEAF------------------GVS 45 Query: 74 AHCLIRR---DG--EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------- 121 H LI DG +I Q VP RAWHAGVS +QGR ND SIGIE+ Sbjct: 46 GHYLIPESSIDGKKQIFQLVPEKHRAWHAGVSAWQGRIHLNDTSIGIEIVNLGYQEEGEK 105 Query: 122 --TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 + D Q + + + + +I+ Y + GH DI+P+RK DPGP F W + Sbjct: 106 RRWFPFLDYQIELIIELAKDIIERYQLHPTCVVGHSDISPERKADPGPLFPWKKLYEQ 163 >UniRef50_P75820 N-acetylmuramoyl-L-alanine amidase amiD n=119 Tax=Enterobacteriaceae RepID=AMID_ECOLI Length = 276 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 51/167 (30%), Positives = 70/167 (41%), Gaps = 36/167 (21%) Query: 27 TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI-----RRD 81 +LV+H + A + +VS+H L+ R + Sbjct: 43 RIKVLVIHYTAD--------------------DFDSSLATLTDKQVSSHYLVPAVPPRYN 82 Query: 82 G--EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL---------AYTDAQY 130 G I Q VP + AWHAG+S ++G R ND SIGIELE + AQ Sbjct: 83 GKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQI 142 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 Q L + + +I Y +N+ H DIAP RK DPGP F W + Sbjct: 143 QALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQ 189 >UniRef50_C6X3P6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacteria RepID=C6X3P6_FLAB3 Length = 342 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 32/168 (19%) Query: 24 DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR--D 81 + +++H +L + VS+H L+ D Sbjct: 101 QNFRQKYIILHYTALDD--------------------DKSVMVLTQQSVSSHYLVNNLGD 140 Query: 82 GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT----------LAYTDAQYQ 131 EI Q V +KR++HAG+S ++ ND SIGIE+ + + Q + Sbjct: 141 REIYQLVDENKRSYHAGISTWRNDSMLNDTSIGIEIVNAGYVTDSTGVKIFPGFDEGQVK 200 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 ++AA+ + + Y N+ H DIAP RK DPGP F W + Sbjct: 201 KVAALVKDIAGRYMIPPTNILAHSDIAPTRKQDPGPKFPWKKLYDEYQ 248 >UniRef50_D2AQX4 Negative regulator of beta-lactamase expression-like protein n=4 Tax=Actinomycetales RepID=D2AQX4_STRRD Length = 467 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 74/190 (38%), Gaps = 33/190 (17%) Query: 2 LLEQGWLVGARRVP--SPHY--DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTID 57 L A V S +Y RP +V+H Sbjct: 207 QLAAPDYPNAGWVAASSANYTASSRPSAYAIDRIVIHVT------------------QGS 248 Query: 58 PQAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE 116 + + VSAH ++R DG + Q V AWHAG Y N S+GIE Sbjct: 249 YAGTISWFQNPSASVSAHYVVRSSDGAVTQMVRDKDVAWHAGNWSY------NTRSVGIE 302 Query: 117 LEG--TDTLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWA 172 EG +D +TDA Y+ AA+TR + D Y ++ GH + TDPGP +DW Sbjct: 303 HEGYVSDASWFTDAMYRSSAALTRHIADRYGIPKDRAHIIGHNQVPGATHTDPGPYWDWN 362 Query: 173 RFRVLVSKET 182 R+ V+ + Sbjct: 363 RYMQYVTGGS 372 >UniRef50_A5WCW3 N-acetylmuramoyl-L-alanine amidase, family 2 n=5 Tax=Bacteria RepID=A5WCW3_PSYWF Length = 308 Score = 143 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 69/187 (36%), Gaps = 43/187 (22%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 S Y + + +V+H + E + VSAH Sbjct: 55 SQSYQAQGKSQRIKYIVLHYTAENEPE--------------------SLRILTTANVSAH 94 Query: 76 CLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------------ 121 LI D I Q VP ++RAWHAG + GR ND SIGIE+ Sbjct: 95 YLIPITDDKPIYQLVPDNQRAWHAGQGSFAGRSILNDTSIGIEIVNEGIQQQFRKAKNTD 154 Query: 122 ---------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWA 172 + +TD Q +++A + + L Y + GH D+AP RK DPG F W Sbjct: 155 NDGYHPAEHYVEFTDIQIKKIAQLVQDLAQKYEIEPTLIIGHSDMAPSRKIDPGAKFPWE 214 Query: 173 RFRVLVS 179 R Sbjct: 215 RLYKEYG 221 >UniRef50_Q12NJ5 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Shewanella denitrificans OS217 RepID=Q12NJ5_SHEDO Length = 272 Score = 143 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 78/212 (36%), Gaps = 55/212 (25%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAH 61 ++E L SP+ P+ +V+H W+ Sbjct: 1 MIEGHKLKDIPFYASPNVGEVMIA-PPSAVVIHYTGGSTLAGAVEWLI------------ 47 Query: 62 PFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 + SAH +I G+IVQ VPF++ AWHAG S YQGR N FSIGIEL Sbjct: 48 -----NPQAKASAHVVIGEAGDIVQLVPFNQVAWHAGKSHYQGRSNFNRFSIGIELVNPG 102 Query: 122 -----------------------------------TLAYTDAQYQQLAAVTRALIDCYPD 146 AYT AQ + + L + YP Sbjct: 103 QLTLVGQQHCAWFGDPYPQERVVKIPQKDSIQEAVWCAYTQAQIIAVKRLLLMLKEYYPI 162 Query: 147 IAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 + GH +I+P RK DPGPAF A R V Sbjct: 163 NL--LVGHDEISPGRKRDPGPAFPMAPLRRTV 192 >UniRef50_A1UW52 N-acetylmuramoyl-L-alanine amidase domain protein n=62 Tax=Proteobacteria RepID=A1UW52_BURMS Length = 341 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 64/186 (34%), Gaps = 43/186 (23%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 + SP+ D R LV+H + VS Sbjct: 63 IASPNQDSR-----VRTLVLHYTAQTLARSVA------------------LLTDPARPVS 99 Query: 74 AHCLI---RRDGE---IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------ 121 AH L+ G + VP RAWHAGVS +QG N SIG+E+ T Sbjct: 100 AHYLVPDAADAGTLFRVYALVPETNRAWHAGVSYWQGERLLNASSIGVEIVNTGFPDADE 159 Query: 122 --------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR 173 + DAQ + + + + + + GH DIAP RK DPGP F W Sbjct: 160 NAPLMRRRWAPFPDAQMAVVGRLAADIAARHEIPPQKVVGHSDIAPGRKLDPGPLFPWRM 219 Query: 174 FRVLVS 179 Sbjct: 220 LHEQYG 225 >UniRef50_B8GD95 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=3 Tax=Chloroflexus RepID=B8GD95_CHLAD Length = 641 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 22/172 (12%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 + + ++V+H + + G VS H Sbjct: 12 NNFQPGSPDRIRMIVLHATAGS------------YPGDFKWLRQG---GAPGREVSVHYY 56 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQY----QGRERCNDFSIGIELEG--TDTLAYTDAQYQ 131 I + G+I Q V AWHAGVS++ + CN+ S+GIELE Y QY Sbjct: 57 ITKRGQIFQLVADHDIAWHAGVSRWEVDGRTVYGCNEVSLGIELENRNDGRDPYPPEQYA 116 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 + R L+ Y + H DI+P RKTDP F W +F V + T Sbjct: 117 AALWLVRELVQKYHIPPNQVVRHLDISPGRKTDP-AGFPWQQFLDEVFADLT 167 >UniRef50_C0QVR5 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QVR5_BRAHW Length = 342 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 76/196 (38%), Gaps = 57/196 (29%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 SP Y+ R +++H +L F + VSAH Sbjct: 43 SPAYNLR-----IKYIILHYTALND--------------------DLSFKVLTDPGVSAH 77 Query: 76 CLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-------------- 119 LI R D I + V + RAWHAG++ + R ND SIGIE+ Sbjct: 78 YLITTREDEPIYKLVDDNDRAWHAGITMFDNRHSMNDTSIGIEIVNLGFLQKVTNTYEDL 137 Query: 120 ----------------TDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKT 163 + + + D+Q ++A + + LI+ Y N+ GH DIAP RK Sbjct: 138 RRMTKKQREELFFIPYDEYIEFEDSQIDKVAYLLKELIEKYGIKPYNILGHSDIAPYRKK 197 Query: 164 DPGPAFDWARFRVLVS 179 DPGP F W R + Sbjct: 198 DPGPKFPWKRLYDEYN 213 >UniRef50_D1WWE1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=7 Tax=Streptomyces RepID=D1WWE1_9ACTO Length = 519 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 67/184 (36%), Gaps = 34/184 (18%) Query: 5 QGWLVGARRVP--SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 AR V S ++ +V+H + Sbjct: 212 SPDYPSARWVAAYSGNFVVGRKA-AVDKVVIHTTQGSYAGSISWY--------------- 255 Query: 63 FFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD 121 + +VSAH IR DGE+ Q V AWHAG N S+GIE EG Sbjct: 256 ---QNPASKVSAHYTIRSSDGEVTQSVLEKDTAWHAG--------STNSSSVGIEHEGYV 304 Query: 122 TLA--YTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 YT+A Y+ A +T+ L Y ++ GH + TDPGP +DW + L Sbjct: 305 DNPAWYTEAMYRSSAELTKHLAARYGIPKNRSHIIGHSEAPGADHTDPGPNWDWNHYMEL 364 Query: 178 VSKE 181 + E Sbjct: 365 IDGE 368 >UniRef50_D2BEW5 Negative regulator of beta-lactamase expression-like protein n=2 Tax=Streptosporangium roseum DSM 43021 RepID=D2BEW5_STRRD Length = 480 Score = 141 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 35/181 (19%) Query: 7 WLVGARRVP--SPHY--DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 A P S +Y RP + +V+H Sbjct: 210 DYPSAHWAPANSGNYAVSSRPSGDVIDRIVIHVT------------------QGSYAGTI 251 Query: 63 FFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-- 119 + + +VSAH ++R DG++ Q V RA+HAG N S+GIE EG Sbjct: 252 SWFQNPAAQVSAHYVVRSSDGDVTQMVREKNRAFHAG--------SFNRRSVGIEHEGYV 303 Query: 120 TDTLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 + +TDA Y+ AA+TR + D Y ++ GH + TDPGP ++W ++ Sbjct: 304 DNASWFTDAMYRSSAALTRNIADRYGIPKDRAHIVGHHQVPGTDHTDPGPNWNWTKYMQF 363 Query: 178 V 178 V Sbjct: 364 V 364 >UniRef50_A5UR54 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Roseiflexus RepID=A5UR54_ROSS1 Length = 419 Score = 141 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 71/170 (41%), Gaps = 24/170 (14%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 SP+Y R + + +++V+H + RVSAH Sbjct: 11 SPNYGSR-NGRSISMIVIHATAGTVRSALAWL------------------TNPASRVSAH 51 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELE--GTDTLAYTDAQYQQL 133 LI + G+I + VP + AWHAG + ++G ND S+GIELE Y Q + L Sbjct: 52 YLIDKAGQIYRLVPDEYAAWHAGRAAWRGETAINDISLGIELENANNGRDPYPATQMESL 111 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFDWARFRVLVSKE 181 +TR + Y + H DIA RK+DP F W F V E Sbjct: 112 VQLTRDKVAQYRIAPDMVVRHLDIAIPRGRKSDP-AGFPWNDFLRQVFAE 160 >UniRef50_Q1ARF9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARF9_RUBXD Length = 496 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 69/185 (37%), Gaps = 33/185 (17%) Query: 5 QGWLVGARRVPSP--HY--DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 A + +Y R +V+H + Sbjct: 195 SADYGRATWYGAHPDNYTDSNRERSYDINRIVIHVT------------------QGSWSS 236 Query: 61 HPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG 119 + + +VSAH +R DG+I Q V AWHAG Y N SIGIE EG Sbjct: 237 AINWFKDGRAQVSAHYTVRSSDGKIGQSVREADIAWHAGNWDY------NTHSIGIEHEG 290 Query: 120 --TDTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 + +TDA Y+ A + L Y P K++ GH + TDPGP ++W R+ Sbjct: 291 YVSQKRWFTDAMYRSSARLAAYLCKKYRIPIDRKHIIGHNQVPGADHTDPGPYWNWDRYM 350 Query: 176 VLVSK 180 LV Sbjct: 351 RLVRS 355 >UniRef50_B3ESH1 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESH1_AMOA5 Length = 322 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 34/176 (19%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 ++ E LV+H F ++I RVSAH + Sbjct: 64 NHYGDRGTEDIAYLVMHYTVCN----------------FPATMRLFTSDIPEGRVSAHYV 107 Query: 78 IRR--------DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD-------- 121 + G + Q VP +K AWHAG+S ++G + N SIG+E Sbjct: 108 VTEEERERDVQGGMVFQVVPEEKTAWHAGISYWRGEQGLNLRSIGVENVNKGFVGKESEY 167 Query: 122 --TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 + Q + L +++ +++ Y +N+ GH DIAP RK DPG F W + Sbjct: 168 PNWFTFDKKQIRSLGTLSQYIVNSYNIAPQNVVGHADIAPTRKQDPGILFPWEKLY 223 >UniRef50_A4SRC8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Aeromonas RepID=A4SRC8_AERS4 Length = 273 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 67/185 (36%), Gaps = 37/185 (20%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 A S Y +E L++H Sbjct: 18 QPAPYQLSSRYPSASQNERIAFLILHYTDEDDAHSLR------------------LLTEP 59 Query: 69 HLRVSAHCLIRRDGE-----IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD-- 121 +VSAH LI RD + + Q VP +RAWHAG S++ N SIGIE+ Sbjct: 60 AHQVSAHYLIPRDTDQTPLPVYQLVPDSQRAWHAGRSRWHQYAGLNASSIGIEIVNLGYP 119 Query: 122 ------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF 169 YT AQ + A+T+ L+ Y + H D+AP+RK DPGP F Sbjct: 120 PEDALLPAHQRRWQPYTQAQIAAIGALTQKLVQRYRIPPTQVLAHSDVAPERKQDPGPHF 179 Query: 170 DWARF 174 W Sbjct: 180 PWREL 184 >UniRef50_Q1QX12 Negative regulator of AmpC, AmpD n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QX12_CHRSD Length = 303 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 66/169 (39%), Gaps = 30/169 (17%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 Y LV+H D A + + VSAH ++ Sbjct: 55 YTAPGQSSRVRHLVLHYT--------------------DSDARRSLSTLTGPHVSAHYVL 94 Query: 79 RRDG-EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---------TLAYTDA 128 R+ +I Q V +RAWHAG S + R ND SIGIE+ Y A Sbjct: 95 TREAPKIYQLVDESRRAWHAGASAWHSRTNLNDTSIGIEVVNRGPYQTPAGRAWTPYPSA 154 Query: 129 QYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 Q L A+ R ++ + ++ GH DIAP RK DPGP F W R Sbjct: 155 QIDTLIALARDIVARHAIDPVDVVGHADIAPRRKIDPGPRFPWYRLYRA 203 >UniRef50_UPI00016A62BF N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A62BF Length = 214 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 61/173 (35%), Gaps = 36/173 (20%) Query: 21 CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR 80 + D LV+H + + VSAH ++ Sbjct: 38 AQGADARIRFLVMHYTESDEAQ--------------------SLRTLTGDAVSAHYVVPA 77 Query: 81 DGEI-------VQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---------TLA 124 I Q VP +RAWHAGVS +QG N SIGIE Sbjct: 78 QPRIEWGKPVVYQLVPEAQRAWHAGVSAWQGATELNAASIGIENVNGGPADTPQGRTWQP 137 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 Y Q L +++ ++ Y + GH DIAP RK DPGPAF W Sbjct: 138 YPPEQVDALIRLSQDIVARYAIPPTRVVGHSDIAPQRKIDPGPAFPWRALAQA 190 >UniRef50_D1SAT8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SAT8_9ACTO Length = 516 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 56/181 (30%), Positives = 70/181 (38%), Gaps = 33/181 (18%) Query: 7 WLVGARRVP--SPHY--DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 A VP S +Y R +V+H T Sbjct: 215 DYGPAAWVPANSSNYTVSSRESAYPINYIVIH------------------TMQGSYAGSI 256 Query: 63 FFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-- 119 + + A SAH L+R DG + Q V AWHAG Y N SIGIE EG Sbjct: 257 SWFQNAAAGTSAHYLLRSSDGAVTQMVRDKDIAWHAGNWTY------NTQSIGIEHEGYV 310 Query: 120 TDTLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 YTDA Y+ AA+TR L D Y N+ GH + TDPGP ++W + L Sbjct: 311 DSASWYTDAMYRSSAALTRFLCDKYGIPKTRNNIIGHNQVPGATHTDPGPNWNWTYYMQL 370 Query: 178 V 178 V Sbjct: 371 V 371 >UniRef50_C7XRK8 Glutaminase n=10 Tax=Fusobacterium RepID=C7XRK8_9FUSO Length = 301 Score = 139 bits (350), Expect = 6e-32, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 39/186 (20%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 +V S Y +E +++H + E+ RV Sbjct: 51 QVDSNSYVATGKNERVQFIILHYTAT--------------------DNLGSIKELTSSRV 90 Query: 73 SAHCLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD--------- 121 S+H L+ D +I VP ++RAWHAG S ++GR ND S+GIE+ Sbjct: 91 SSHFLVLDEDDNKIYNLVPLEQRAWHAGASAFRGRTNINDTSVGIEIVSDGIAKEFIADP 150 Query: 122 --------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR 173 + Y Q ++ A + + + + Y A+N+ H DIAP RK DPG F W Sbjct: 151 NPYHPYDHYVDYKPIQIEKAAQIIKYVAEKYNIPARNILAHSDIAPSRKKDPGAKFPWKE 210 Query: 174 FRVLVS 179 + Sbjct: 211 LYDKYN 216 >UniRef50_B4RX52 N-acetylmuramoyl-L-alanine amidase, putative n=2 Tax=Alteromonas macleodii RepID=B4RX52_ALTMD Length = 315 Score = 138 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 78/211 (36%), Gaps = 55/211 (26%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 + SP+ P +V+H + + + A Sbjct: 22 ENVKFTASPNTSGAFQTGAPDTIVIHFTAGSSLDSSVNVLT-----------------NA 64 Query: 69 HLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------- 121 VSAH + R+G+IVQ +P +K WHAG S Y+GR N +SIGIEL+ Sbjct: 65 ESGVSAHFALGRNGDIVQMLPTNKIGWHAGKSHYKGRSGLNRYSIGIELDNAGQLKPRGD 124 Query: 122 -----------------------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMT 152 YTD Q ++ + L + YP + Sbjct: 125 GTYESWFGNVYRESEVIAAQHPNQSVLGYWHKYTDIQIASTISLCKVLCEHYPISV--VV 182 Query: 153 GHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 GH +IAP RK DPGPAF + R V E + Sbjct: 183 GHDEIAPSRKVDPGPAFPMHQIREQVLLEIS 213 >UniRef50_B8GT21 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GT21_THISH Length = 275 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 73/211 (34%), Gaps = 57/211 (27%) Query: 6 GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 SP + TP LLV+H + E W Sbjct: 11 HDNDPCEYRKSPCHG---GKMTPRLLVIHFTAGASAESSINWFL---------------- 51 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG------ 119 + SAH +I R+G I Q VPFD AWHAG S++ N SIGIEL+ Sbjct: 52 -NPQAKASAHLVIDRNGHITQMVPFDTVAWHAGASRWNDLSGLNHHSIGIELDNAGRLQP 110 Query: 120 -----------------------------TDTLAYTDAQYQQLAAVTRALIDCYPDIAKN 150 + YT Q + V + L Y ++ Sbjct: 111 HGDQWRSWFGRDYHDDEVLVARHKHETEPSGWQLYTREQIETTLEVAQCLFARYGL--ED 168 Query: 151 MTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 + GH DIAP RK+DPGPAF R + Sbjct: 169 IVGHEDIAPGRKSDPGPAFPMGALRARLLGR 199 >UniRef50_C4DNA4 Negative regulator of beta-lactamase expression n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DNA4_9ACTO Length = 330 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 67/187 (35%), Gaps = 34/187 (18%) Query: 7 WLVGARRVPSP--HYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 GA + + +Y RP + +V+H W Sbjct: 37 DYQGASWLAAHKANYTNASRPKSDPINKVVIH-TMQGTASGTKAWFR------------- 82 Query: 63 FFAEIAHLRVSAHCLIRRD-GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-- 119 V+ H L+ G + Q V AWHAG Y N SIGIE EG Sbjct: 83 ----NPKSEVTTHYLVSSSKGSVTQMVHESDIAWHAGNWDY------NKTSIGIEHEGYV 132 Query: 120 -TDTLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 YT Y+ A + R++ D Y K++ H ++ TDPG ++W R+ Sbjct: 133 QDPKKWYTTNMYESSARLVRSICDRYNIPMDRKHIIAHSEVPGATHTDPGKGWNWDRYMD 192 Query: 177 LVSKETT 183 LV + T Sbjct: 193 LVRESKT 199 >UniRef50_C1QGN2 Negative regulator of beta-lactamase expression n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QGN2_9SPIR Length = 344 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 75/199 (37%), Gaps = 57/199 (28%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 SP Y+ R +++H +L + VSAH Sbjct: 43 SPAYNLR-----IKYIILHYTALDD--------------------DLSLKVLTDPGVSAH 77 Query: 76 CLI--RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-------------- 119 LI R + I + V + RAWHAGV+ + R ND SIGIE+ Sbjct: 78 YLITTRENDPIYKLVDDNNRAWHAGVTMFDNRLTMNDTSIGIEIVNLGFLEKVTNTQEQL 137 Query: 120 ----------------TDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKT 163 + L Y ++Q Q++ + R LID Y N+ GH DIAP RK Sbjct: 138 RRMTKRERENLFFIPYDEYLEYNESQIQKVVYLLRNLIDKYGVKPYNILGHSDIAPYRKK 197 Query: 164 DPGPAFDWARFRVLVSKET 182 DPGP F W R + Sbjct: 198 DPGPKFPWKRLHDEYNLGM 216 >UniRef50_C9LCL1 N-acetylmuramoyl-L-alanine amidase CwlL n=2 Tax=Clostridiales RepID=C9LCL1_RUMHA Length = 469 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 66/181 (36%), Gaps = 36/181 (19%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +++ + +V+H + G + + + + SAH Sbjct: 11 NFN-KGSISRIKYIVIHYVGALGG----------------AEDNCRYYGGGNRNASAHYF 53 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-----------YT 126 + +GE+ Q V AWH G S Y+ E N SIGIE+ + Sbjct: 54 VGFNGEVWQCVEDANIAWHCGASSYKHAECRNANSIGIEMCVRKKNTKSMGATDKDWYFE 113 Query: 127 DAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPA------FDWARFRVLVSK 180 DA + A +TR L++ Y A ++ H D+ K P P W F+ +S Sbjct: 114 DATVEAAAELTRYLMNKYGVPASHVIRHYDVTG--KICPNPYVYNTSAHTWDEFKRKISG 171 Query: 181 E 181 + Sbjct: 172 Q 172 >UniRef50_C9N2Y5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9N2Y5_9ACTO Length = 443 Score = 135 bits (340), Expect = 7e-31, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 67/180 (37%), Gaps = 39/180 (21%) Query: 18 HYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 +YD RPD +V+H+ +D + + SAH Sbjct: 65 NYDTANRPDSNAVKFIVLHDTE------------------VDYDTTLKIFQNPANQTSAH 106 Query: 76 CLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTDAQYQ 131 ++R DG + Q V AW AG N SIGIE EG YT Y+ Sbjct: 107 YVVRSADGHVTQMVKNKDVAWQAGNWY------LNTHSIGIEQEGVAAEGATWYTSEMYR 160 Query: 132 QLAAVTRALIDCY--PDIAKNMTGHCDIAPDR-------KTDPGPAFDWARFRVLVSKET 182 A + R L Y P +++ GH + P DPGP +DW RF L+ T Sbjct: 161 STARLVRYLAAKYDIPLDRQHILGHDGVPPTSAAGTKNMHWDPGPYWDWNRFMALLGAPT 220 >UniRef50_D2Q0D6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q0D6_9ACTO Length = 638 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 77/204 (37%), Gaps = 50/204 (24%) Query: 4 EQGWLVGARRVPSP----------HYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDAL 51 E + +PSP ++D RP+ ++VH+ Sbjct: 234 ECPRSLACEWLPSPYQDLGNGDYGNHDKANRPETGKINYIIVHDTETS------------ 281 Query: 52 FTGTIDPQAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCND 110 + GT+ P + VS +R DG+I Q+V AWHAG N Sbjct: 282 WQGTLRLVQDPTY-------VSWQYTMRSSDGQIWQHVKAKDVAWHAGNWY------MNM 328 Query: 111 FSIGIELEGT---DTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHCDIAP------ 159 SIGIE EG YT+A Y+ A + R L + + P ++ GH +I Sbjct: 329 HSIGIEHEGYAAQGATWYTEALYRNSARLVRYLAEKHDIPLDRAHIIGHDEIPGTLPTTV 388 Query: 160 -DRKTDPGPAFDWARFRVLVSKET 182 DPGP +DW R+ L+ Sbjct: 389 AGMHWDPGPYWDWERYFELLEAPI 412 >UniRef50_D0LQ75 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Myxococcales RepID=D0LQ75_HALO1 Length = 551 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 69/191 (36%), Gaps = 34/191 (17%) Query: 6 GWLVGARRVPSPHYDCRPDDE--TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPF 63 + PSP+Y+ RP P ++V+H + Sbjct: 229 PDYADSVWRPSPNYNSRPSGSIGDPAMVVIHTCEG------------------SYSSCWS 270 Query: 64 FAEIAHLRVSAHCLIRRDG-EIVQYVPFDKRAWHAGVSQ----------YQGRERCNDFS 112 + + VSAH ++ G +I Q V +RAWH G S ++ N F+ Sbjct: 271 WLTNSASGVSAHYVVNESGSQISQLVRESQRAWHIGASYQCSNNSSVDCWRNGYSSNHFT 330 Query: 113 IGIELEGTDTLA-YTDAQYQQLAAVTRALIDCYPDIAK--NMTGHCDIAPDRKTDPGPAF 169 IGIE G + + + Q A + + ++ H + P +TDPGP + Sbjct: 331 IGIEHGGFASQSSFPSGQIDASARLVCDITRDQGIPRDRYHIVSHGQLQPYNRTDPGPNW 390 Query: 170 DWARFRVLVSK 180 W + ++ Sbjct: 391 PWTTYLNKINS 401 >UniRef50_A6UZQ6 N-acetylmuramoyl-L-alanine amidase AmiD n=53 Tax=Proteobacteria RepID=A6UZQ6_PSEA7 Length = 291 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 67/179 (37%), Gaps = 21/179 (11%) Query: 20 DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI- 78 D + P L + S + L + SAH L+ Sbjct: 28 DAHGETLAPPPLAIDYNSYRTSAAYNKRVRYLVLHYTALDFSRSVEMLTRGPGSAHYLVP 87 Query: 79 -------RRDG----EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL---- 123 RR G I V + RAWHAGVS + GRE ND SIGIE+ Sbjct: 88 SPADASYRRAGFSGQRIFNLVDENDRAWHAGVSSWGGREGLNDSSIGIEIVNLARDDDGV 147 Query: 124 ----AYTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 Y +Q + L + R ++ YP K++ GH DIA RK+DPGP W Sbjct: 148 FTFPDYEPSQIEALRQLARNILQRYPDISPKHVLGHSDIAVGRKSDPGPKLPWKELHDA 206 >UniRef50_B3QXY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXY2_CHLT3 Length = 288 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 76/216 (35%), Gaps = 57/216 (26%) Query: 1 MLLEQGWLVG---ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTID 57 + + L G +P++ +V+H + + Sbjct: 3 LTISNHLLQGEAVCHDYSTPNHSGTFSAGKADTIVIHYTAGRDARSSVQTLC-------- 54 Query: 58 PQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117 L+ SAH +I R+GEI Q PFD+ WHAG S + R N FSIGIE+ Sbjct: 55 ---------SPDLKASAHLVIGRNGEIYQLAPFDRITWHAGKSNWHERSGLNQFSIGIEI 105 Query: 118 EGTD-----------------------------------TLAYTDAQYQQLAAVTRALID 142 + YT+AQ + + R L Sbjct: 106 DNAGRLTKQGTEYLSWFGKSYAANEVFSGVHRHEQTLSFWHRYTEAQILLVEEICRLLRQ 165 Query: 143 CYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 Y K + GH +I+P RKTDPGPAF R V Sbjct: 166 VYDI--KEILGHEEISPGRKTDPGPAFPLDVLRNHV 199 >UniRef50_B5GAH2 Amidase n=15 Tax=Streptomyces RepID=B5GAH2_9ACTO Length = 200 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 33/180 (18%) Query: 9 VGARRVPS--PHYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFF 64 GA VP+ +Y RP +V+H FT T+ Sbjct: 43 PGAEWVPASTANYTVAKRPSQYPVEYVVIHVT------------QEYFTDTL------AI 84 Query: 65 AEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 + +V+AH ++R DG + Q V AWHAG Y N SIGIE EG Sbjct: 85 FQNPAKQVTAHYVVRSADGHLAQCVREKDVAWHAGNWDY------NTRSIGIEHEGWVDR 138 Query: 124 A--YTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 +TDA ++ AA+T ++ + Y +++ GH ++ TDPG +DW ++ LV+ Sbjct: 139 PEYFTDAMFEASAALTASVCERYGVPKDREHILGHVEVPGTDHTDPGALWDWTKYLRLVN 198 >UniRef50_A1K6E1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Azoarcus sp. BH72 RepID=A1K6E1_AZOSB Length = 286 Score = 132 bits (332), Expect = 7e-30, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 60/208 (28%) Query: 15 PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 SP+++ P +V H + + +++A + RVSA Sbjct: 24 ASPNHN---GIINPKFVVFHYTACSHADASAAFMNA----------------SGNRRVSA 64 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD------------- 121 H L+ DG I Q+V F+ RAWHAGVS+++ N SIG+E+ Sbjct: 65 HLLVDSDGSITQFVDFNLRAWHAGVSEWEDYRDLNSHSIGVEIVNYGYLLKNSAGGFTLS 124 Query: 122 --------------------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHC 155 A+T Q + A+ L D Y ++ GH Sbjct: 125 NGRSSPFTPAEVVEARHRKEAVRHQYWHAFTPEQLETCEALVEVLFDAYAL--SDVLGHD 182 Query: 156 DIAPDRKTDPGPAFDWARFRVLVSKETT 183 DIAP RK DPGPAF R + + Sbjct: 183 DIAPTRKVDPGPAFPMDRIKSRAVGRDS 210 >UniRef50_C0R4G3 N-acetylmuramoyl-L-alanine amidase, family 2 n=9 Tax=Wolbachia RepID=C0R4G3_WOLWR Length = 525 Score = 132 bits (332), Expect = 7e-30, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 38/175 (21%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +Y R + +++VH+ + ++A +S H + Sbjct: 91 NYGDR-AGKKVLMVIVHHTETSTLKGTKDTLNA-------------------RGLSVHFI 130 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRER--------CNDFSIGIELEGTDTLAYTDAQ 129 + RDG I VP +K AWHAG+S + + N++S+GIE+ T + + Q Sbjct: 131 VDRDGNITLMVPLEKEAWHAGISYARVKVDSKLEELRKLNNYSVGIEIVNTGLEPFPEEQ 190 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDI-----APD-----RKTDPGPAFDWARF 174 + + + L++ + + H +I P+ RK DP FDW Sbjct: 191 MRSVKELILYLMERFKIKRDMIFSHSEIGTIVYDPELGYTMRKPDPHKLFDWELL 245 >UniRef50_B8FYR6 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Desulfitobacterium hafniense RepID=B8FYR6_DESHD Length = 242 Score = 131 bits (331), Expect = 9e-30, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 27/181 (14%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 V +P+Y ++ H + + G + + Sbjct: 3 IEWVGTPNYRQGRSGNQVFAIINHITAGR------------YPGCLSW------MQNPAS 44 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAG-----VSQYQGRERCNDFSIGIELEGTDTLAY 125 + S+H L+ +DG I+Q V + AWHAG + + N ++IGIE E + Sbjct: 45 QASSHYLVLKDGRILQLVKDEDTAWHAGLVNKPNWKLYNGKNPNLYTIGIEHEALEGEGL 104 Query: 126 TDAQYQQLAAVTRALIDCYPD---IAKNMTGHCDI-APDRKTDPGPAFDWARFRVLVSKE 181 TDAQYQ + L+ +P + ++ GH + +R DPG F W + + + Sbjct: 105 TDAQYQSTLWLHGQLLAKFPAIKPDSDHIIGHYRTDSVNRPNDPGAKFPWEQLFKDLKSK 164 Query: 182 T 182 Sbjct: 165 D 165 >UniRef50_D0RN01 N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN01_9RICK Length = 159 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 18/164 (10%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 + PS ++D + D +++H + D ++ + +V Sbjct: 7 QKPSENFD-KLKDRRIKYVIIHYTGMR-----------------DQKSAIKRLQSKVAKV 48 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H LI R G++ Q V AWHAG S++ N SIGIEL ++ + Q Sbjct: 49 SCHYLISRGGKVYQMVQDLDVAWHAGKSKWGKDINLNSKSIGIELVNKGFESFPNKQILA 108 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 L + + L Y + GH DI+P RKTDPGP F W Sbjct: 109 LIKILKILKKKYKIKPSYVLGHEDISPGRKTDPGPKFPWKILYN 152 >UniRef50_D2PZI0 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZI0_9ACTO Length = 455 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 32/182 (17%) Query: 7 WLVGARRVPSPHYDCR-PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 GA P+ + R + +V+H +TGTI Sbjct: 216 DYPGAIWNPASTSNYRVGRTAAISTIVIHVT------------QGSYTGTISW------F 257 Query: 66 EIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDT 122 + +VSAH +IR DG++ Q V AWHA N +++GIE EG Sbjct: 258 KNPASQVSAHYVIRSSDGQVTQMVAEKDTAWHA--------RSTNPYTVGIEHEGWVDQP 309 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 +TDA Y+ AA+TR++ D ++ GH ++ + TDPGP ++W + LV+ Sbjct: 310 SWFTDAMYRSSAALTRSIADRRGIPKDRAHIRGHNELPDNDHTDPGPNWNWTYYMQLVNG 369 Query: 181 ET 182 T Sbjct: 370 GT 371 >UniRef50_Q15N79 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Gammaproteobacteria RepID=Q15N79_PSEA6 Length = 818 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 73/199 (36%), Gaps = 55/199 (27%) Query: 10 GARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 +PS ++ R LV+H ++ + +D Sbjct: 28 PISEMPSKNFSHR-----VKFLVMHFTAIDYQKSVHALVD-------------------E 63 Query: 70 LRVSAHCLIRRDG---------EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 +SAH LI EI++ V DKRAWHAG S +QGR ND SIGIE+ Sbjct: 64 GGLSAHYLIPESNDPSYPKDSLEILKLVDEDKRAWHAGNSVWQGRSELNDSSIGIEIVNV 123 Query: 121 DT---------------------LAYTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIA 158 Y Q + L A+++ ++ P + GH DIA Sbjct: 124 PECHFDKEANTTSEHGENRLCVFPDYDPKQIELLIALSQQILARNPDISPTKVVGHSDIA 183 Query: 159 PDRKTDPGPAFDWARFRVL 177 P RK DPGP F W Sbjct: 184 PSRKNDPGPRFPWFELYQA 202 >UniRef50_D1XLT9 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Streptomyces sp. ACTE RepID=D1XLT9_9ACTO Length = 444 Score = 130 bits (326), Expect = 3e-29, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 68/181 (37%), Gaps = 39/181 (21%) Query: 18 HYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 +YD RP +V+H+ +D + + SAH Sbjct: 66 NYDTADRPRSNAVEFIVLHDTE------------------VDYDTTLKIFQDPANKTSAH 107 Query: 76 CLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTDAQYQ 131 ++R DG + Q V AW AG N SIGIE EG YTDA Y+ Sbjct: 108 YVVRSADGHVTQMVKNKDVAWQAGNWY------LNTHSIGIEQEGVAAEGAKWYTDAMYR 161 Query: 132 QLAAVTRALIDCYPDI--AKNMTGHCDIAPDR-------KTDPGPAFDWARFRVLVSKET 182 A + R L Y +++ GH + P DPGP +DW RF L+ + T Sbjct: 162 STARLVRHLAAVYDIPLDRQHILGHDGVPPTSAAGTQNMHWDPGPYWDWNRFMALLGRPT 221 Query: 183 T 183 Sbjct: 222 V 222 >UniRef50_D1X7T3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=19 Tax=Streptomyces RepID=D1X7T3_9ACTO Length = 249 Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 70/185 (37%), Gaps = 32/185 (17%) Query: 7 WLVGARRVPSPHYD----CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 GA V + + RPDD +++H Sbjct: 76 DYPGATWVAASEANWRRADRPDDFPVDRVIIHVTQGSFASAV------------------ 117 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 + + + H ++ +DG +VQ + A+ AG Y N+ ++GIE EG Sbjct: 118 KVFQDPAHQAATHYIVGQDGRVVQMIRELDVAYQAGNRAY------NERAVGIEHEGFVD 171 Query: 123 LA--YTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 T A Y A +T ++ + +++ GH ++ TDPGP +DW R+ LV Sbjct: 172 RPKDLTKAMYASSARLTASICARHGIPVDREHIIGHVEVPGTDHTDPGPHWDWDRYMELV 231 Query: 179 SKETT 183 + T Sbjct: 232 RRAAT 236 >UniRef50_Q8ES14 Putative uncharacterized protein OB0830 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ES14_OCEIH Length = 234 Score = 129 bits (324), Expect = 6e-29, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 76/192 (39%), Gaps = 40/192 (20%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 +P + + R D T +++H S + P+ Q + V Sbjct: 53 YLPEENSEPR--DSLVTHVMLHFSSNVIEKPEDPF-----------QVEDIYKVFHDYGV 99 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR----ERCNDFSIGIEL----------- 117 S H +I R GEI ++V D+ A+HAG + +G N +SIGIEL Sbjct: 100 STHYVIDRTGEIYRFVSEDRNAYHAGEGKIEGVPKYENNMNRYSIGIELLAIGTKEEMMP 159 Query: 118 ---------EGTDTLAYTDAQYQQLAAVTRALIDCY---PDIAKNMTGHCDIAPDRKTDP 165 + + YTD QY L + + + ++ GH + AP+RKTDP Sbjct: 160 MMSPELYDTISSKHIGYTDKQYDALQDLLIDISSRHHKLKLNRNHIIGHQEYAPERKTDP 219 Query: 166 GPAFDWARFRVL 177 G FDW R Sbjct: 220 GALFDWERLMSD 231 >UniRef50_B6BVD5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=beta proteobacterium KB13 RepID=B6BVD5_9PROT Length = 134 Score = 128 bits (322), Expect = 8e-29, Method: Composition-based stats. Identities = 53/105 (50%), Positives = 70/105 (66%) Query: 38 LPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHA 97 +PPG + +I+ F +D AHP+F EI L+VSAH LI+R+GE++Q+V + RAWHA Sbjct: 1 MPPGIYNNNYIEDFFQNQLDIDAHPYFKEIKDLKVSAHFLIKRNGELIQFVSCNDRAWHA 60 Query: 98 GVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALID 142 G S YQG+E CNDFSIGIELEG D + D QY +L + L Sbjct: 61 GESSYQGKENCNDFSIGIELEGDDETPFEDDQYIKLIELLGCLKK 105 >UniRef50_UPI0001B539A2 amidase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B539A2 Length = 638 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 73/195 (37%), Gaps = 48/195 (24%) Query: 10 GARRVPSP---------HYDC--RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDP 58 P+P +YD RP D+ +V+H+ Sbjct: 249 ACESAPAPFQKIGDSYGNYDQADRPHDQKIDYIVIHDTEGT------------------W 290 Query: 59 QAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117 + A+ + + H +R DG++ Q+VP WHAG N+ S+GIE Sbjct: 291 DSVLKQAQTPG-QTAWHYTVRSSDGQVAQHVPTKDVGWHAGNWY------LNEKSLGIEH 343 Query: 118 EGTD--TLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAP-------DRKTDPG 166 EG +T+A Y+Q A + R L + ++ GH ++ DPG Sbjct: 344 EGFAAQGTWFTEAMYRQSAKLVRYLAHRFGVPLDRAHILGHDNVPGPNADKIKSMHWDPG 403 Query: 167 PAFDWARFRVLVSKE 181 P +DWA + L+ Sbjct: 404 PYWDWAHYFDLLGAP 418 >UniRef50_C0WQZ5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC n=3 Tax=Lactobacillus RepID=C0WQZ5_LACBU Length = 604 Score = 128 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 68/203 (33%), Gaps = 51/203 (25%) Query: 4 EQGWLVGARRVPS-----------PHYD--CRP-DDETPTLLVVHNISLPPGEFGGPWID 49 + + VP+ +YD RP D +V+HN E Sbjct: 207 DGPDGLPVEWVPALYKEFDNKGDYGNYDLANRPSDGLKINYIVIHNTETTFDEATN---- 262 Query: 50 ALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRD-GEIVQYVPFDKRAWHAGVSQYQGRERC 108 SA+ +I + G + + V AWHAG Sbjct: 263 --------------LFASTPSYTSANYVISSEQGTVAEMVRPQNVAWHAGNWY------I 302 Query: 109 NDFSIGIELEGT---DTLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAP---- 159 N SIGIE EG YT+A YQ AA+ + L Y +++ GH ++ Sbjct: 303 NSHSIGIEHEGYAAVGGYWYTEAMYQSSAALVKYLAAKYNIPLDRQHIIGHDNVPGLTPA 362 Query: 160 ---DRKTDPGPAFDWARFRVLVS 179 DPG ++W + L+ Sbjct: 363 AQKTMHWDPGTYWNWQHYFDLLG 385 >UniRef50_A6GHP2 Putative amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHP2_9DELT Length = 454 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 13/168 (7%) Query: 17 PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 P + + H+ + G + T + + VSAH Sbjct: 24 PDFGGAEYPLAISFNAAHSSNYTAGGMVSFDYITVHTVQGSYTGCQSWFQNPAANVSAHF 83 Query: 77 LIRRD-GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQL 133 ++R D GE+ Q V RAWH G S N ++IGIE EG + YT Y Sbjct: 84 VVRSDDGEVTQMVELADRAWHVGGS--------NAYAIGIEHEGWIDEPAWYTWEMYVSS 135 Query: 134 AAVTRALIDCYPDI--AKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 + +TR D ++ GH ++ TDPG ++W + LV+ Sbjct: 136 SQLTRWTADELDIPKNRDHIVGHVELPNQSHTDPGIHWNWDLYMALVN 183 >UniRef50_D1CGY2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGY2_THET1 Length = 638 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 66/178 (37%), Gaps = 41/178 (23%) Query: 18 HYD--CRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 +YD RP D +V+H+ + + VSA Sbjct: 258 NYDLANRPADGLEIQYIVIHDTEGSYASALSTF-------------------TSQSYVSA 298 Query: 75 HCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT---DTLAYTDAQY 130 H LIR DG + Q VP AW AG N SIGIE EG YT+ Y Sbjct: 299 HYLIRSSDGLVTQLVPTKDVAWQAGNWY------VNIHSIGIEHEGFAVEGATWYTEQMY 352 Query: 131 QQLAAVTRALIDCY--PDIAKNMTGHCDIAPDR-------KTDPGPAFDWARFRVLVS 179 + A + R L + P ++ GH D+ DPGP +DWA + L+ Sbjct: 353 RSSARLVRYLAARFHIPLDRAHILGHDDVPGPGPAYQGRMHWDPGPYWDWAHYMALLG 410 >UniRef50_B1TGB7 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=2 Tax=Burkholderia ambifaria RepID=B1TGB7_9BURK Length = 1030 Score = 126 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 70/192 (36%), Gaps = 46/192 (23%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 R SP++D +T +++H +P + A + Sbjct: 232 RTAASPNFDEGRGSKTIDRIIIHIADVPTIQHVVNTFT-----------------NAASK 274 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELE------------- 118 VS+H L+ + GE+VQ+V AWH S N SIGIE Sbjct: 275 VSSHYLVGQAGEVVQFVSEADTAWHCKGS--------NQRSIGIEHIAVKRGGADYPRRN 326 Query: 119 ----GTDTLAYTDAQYQQLAAVTRALIDCY--PDIAKNMTGHC--DIAPDRKTDPGPAFD 170 D LA T QY+ AA+ +L D Y P + GH D + P +D Sbjct: 327 GTVQHFDALAPTQLQYETSAALVASLCDKYQLPINRTTIMGHREADTSTGHTACPDGNWD 386 Query: 171 WARFRVLVSKET 182 W F LV+ T Sbjct: 387 WDYFMRLVNSRT 398 >UniRef50_A6GDD4 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDD4_9DELT Length = 574 Score = 126 bits (316), Expect = 4e-28, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 32/186 (17%) Query: 9 VGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIA 68 GA SP+Y RP P ++++H+ G + G W + + Sbjct: 224 PGAIWRGSPNYSNRPGGTNPEMVIIHSCE---GSYSGCW---------------SWLSNS 265 Query: 69 HLRVSAHCLIRRDG-EIVQYVPFDKRAWHAGVSQYQGRERC----------NDFSIGIEL 117 VSAH +I G E+ Q V +K+AWH G S N+F+IGIE Sbjct: 266 QAGVSAHYVINNSGSEVSQLVRENKKAWHIGASYNCSLNNSTKCNKNGSSSNNFTIGIEH 325 Query: 118 EGTDTLA-YTDAQYQQLAAVTRALIDCYPDIAK--NMTGHCDIAPDRKTDPGPAFDWARF 174 G A +++ A + + + ++ H + P + DPGP + WA + Sbjct: 326 AGYANQASWSNGLITTSAELVCDITQAWGIPRDQYHIVAHGTLQPYNRIDPGPNWPWANY 385 Query: 175 RVLVSK 180 ++ Sbjct: 386 LAQINA 391 >UniRef50_C0CQ24 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C0CQ24_9FIRM Length = 279 Score = 126 bits (316), Expect = 5e-28, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 64/172 (37%), Gaps = 28/172 (16%) Query: 18 HYDCRPDD--ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 + RP E + +H + P F G D ++ VS+H Sbjct: 121 NPYSRPGTPLEEVKYVAIHYTANPGSTAKNN--RDYFEGLKDNHSN---------EVSSH 169 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG-TDTLAYTDAQYQQLA 134 ++ +GEIVQ +P ++ ++ N ++ IE +T + +A YQ L Sbjct: 170 FVVGLEGEIVQCIPTNEISY--------ATNSRNVDTLSIECCHLDETGKFNEATYQSLV 221 Query: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD----WARFRVLVSKET 182 +T L + + ++ H D+ K P + W + + +S E Sbjct: 222 ELTAYLCNRFGLDIDHVIRHYDVTG--KNCPKYYVEHPEAWEQLKKDISAEM 271 >UniRef50_A9AXU4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AXU4_HERA2 Length = 748 Score = 125 bits (315), Expect = 5e-28, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 65/180 (36%), Gaps = 40/180 (22%) Query: 18 HYD--CRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 +YD RP D +++H+ + + S Sbjct: 258 NYDLANRPADGLDFRYILIHDTEIT------------------YTQTVNVFQNPATGAST 299 Query: 75 HCLIR-RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTDAQY 130 H +IR DG I Q V WHAG N SIGIE EG Y++A Y Sbjct: 300 HYVIRASDGHIAQMVENKNVPWHAGNW------DVNGHSIGIEHEGIAIEGATWYSEAMY 353 Query: 131 QQLAAVTRALIDCYPDI--AKNMTGHCDIAP-------DRKTDPGPAFDWARFRVLVSKE 181 Q A +TR L D Y ++ GH ++ DPGP +DWA + LV Sbjct: 354 QASAQLTRYLADKYQIPLDRSHIIGHDELPGPLPQHQAGMHWDPGPFWDWAHYMDLVRGG 413 >UniRef50_A3TR75 Putative amidase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TR75_9MICO Length = 634 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 67/174 (38%), Gaps = 30/174 (17%) Query: 18 HYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 +YD R D + LVVHN + T I +A P VS H Sbjct: 258 NYDLADREKDLSIDYLVVHNTECT---------YDVCTKLIKGEAEPNRF------VSWH 302 Query: 76 CLIR-RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---YTDAQYQ 131 +R DG + Q+V A HAG N S+G+E EG YT+A Y+ Sbjct: 303 YTVRSNDGHVDQHVATRNVAAHAGNWY------LNMHSVGVEHEGKAGEPGTWYTEALYR 356 Query: 132 QLAAVTRALIDCYPD--IAKNMTGHCDI-APDRKTDPGPAFDWARFRVLVSKET 182 A + L ++ GH + + + K DPGP +DW + L+ Sbjct: 357 SSAELVTYLAAQKGIELDRAHIVGHEEFMSSNYKWDPGPYWDWEHYMALLGAPI 410 >UniRef50_B3ZYJ5 N-acetylmuramoyl-L-alanine amidase, putative n=1 Tax=Bacillus cereus 03BB108 RepID=B3ZYJ5_BACCE Length = 246 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 77/190 (40%), Gaps = 41/190 (21%) Query: 12 RRV-PSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 R + P + R E T +++H +S + P+ + Sbjct: 66 RWILPEKNSKVR--TEPITHVLIHFMSNAVAKPKDPY-----------NVKDAYNSFLDN 112 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG----RERCNDFSIGIELEGTDTL--- 123 +SAH LI R+G + Q V ++ A+HAG + N++SIGIEL G T Sbjct: 113 GLSAHYLIDRNGVVYQLVNENRVAYHAGKGSISNYPEYTNKLNEYSIGIELLGIGTWKEM 172 Query: 124 -----------------AYTDAQYQQLAAVTRALIDCY---PDIAKNMTGHCDIAPDRKT 163 YTD QY+ L + + + +++ GH + A DRKT Sbjct: 173 EIMMSRDTYDLISPHNIGYTDVQYKSLKLLLEDIRKRNQNIQNDREHILGHDEYAKDRKT 232 Query: 164 DPGPAFDWAR 173 DPG FDW++ Sbjct: 233 DPGSLFDWSK 242 >UniRef50_B0G3S2 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G3S2_9FIRM Length = 254 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 63/175 (36%), Gaps = 30/175 (17%) Query: 16 SPHYDCRPD--DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 +P+ R + T +V+H + P G F G D + S Sbjct: 95 TPNPYSRSQEKTDKITGIVIHYTANPGATAIGN--RNYFEGLKDSH---------ETKAS 143 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQ 132 ++ ++ +GEIVQ +P + A+ N ++ IE D + DA Y+ Sbjct: 144 SNFVVGLNGEIVQCIPTWEVAY--------ASNDRNYDTVSIECCHPDATGKFNDATYRS 195 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-----DWARFRVLVSKET 182 + +T L + +++ H D+ K P F W +FR V Sbjct: 196 MVQLTAWLCLKFNLTEEDVIRHYDVTG--KICP-KYFVENEGAWDQFRKDVKSAM 247 >UniRef50_D1SBP4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SBP4_9ACTO Length = 677 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 51/205 (24%) Query: 3 LEQGWLVGARRVPSP------------HYD--CRPDDETPTLLVVHNISLPPGEFGGPWI 48 LE + +P+P ++D RP + +V+H+ G Sbjct: 260 LECPVRLACEWIPAPYEQLSDDPGDYGNHDLGDRPKQQKIEYIVIHDTEGYFGPSVDLVK 319 Query: 49 DALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRER 107 A + G H +R DG I Q++ WHAG Sbjct: 320 RADYLG-------------------WHYTLRSVDGYIAQHIKTKDVGWHAGNWY------ 354 Query: 108 CNDFSIGIELEGTDT--LAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIA----- 158 N SIG+E EG YT+A Y+ A + R L +++ GH ++ Sbjct: 355 VNAKSIGLEHEGFAGQGTWYTEAMYRTSAKLVRHLALKLGIPMDRQHIIGHDNVPGINAG 414 Query: 159 --PDRKTDPGPAFDWARFRVLVSKE 181 DPGP +DW+ + L+ Sbjct: 415 AVGGMHWDPGPYWDWSHYFDLMKAP 439 >UniRef50_Q0AY32 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY32_SYNWW Length = 222 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 61/180 (33%), Gaps = 26/180 (14%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHL 70 + ++ P +V H + L G + + Sbjct: 9 IEWKGTANFSAGRRGRKPIAIVNHITAG------------LLPGALSW------LQNPAS 50 Query: 71 RVSAHCLIRRDGEIVQYVPFDKRAWHAG-----VSQYQGRERCNDFSIGIELEGTDTLAY 125 RVS H LI R G+I Q V + AW G N +++ IE E + Sbjct: 51 RVSTHFLISRQGQIFQLVKEEDTAWANGIVNQPNWVLYDGSNPNFYTLSIEHEALAGDSL 110 Query: 126 TDAQYQQLAAVTRALIDCYPD--IAKNMTGHCDIAP-DRKTDPGPAFDWARFRVLVSKET 182 ++ QYQ + R L+ + +++ GH I +R PG F W R + E Sbjct: 111 SEEQYQASLCLHRLLVSRFNIAVDEEHIIGHYRIDSINRSNCPGSRFPWKRLFSDLKGEK 170 >UniRef50_B4AHH5 N-acetylmuramoyl-L-alanine amidase XlyB (Cellwall hydrolase) (Autolysin) n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AHH5_BACPU Length = 267 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 60/172 (34%), Gaps = 22/172 (12%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 +P + + + P + VHN S + +H F + V Sbjct: 8 YIPKHNRNRPGNTMKPLYITVHNTSNTAKGA-------------NAGSHAAFVARSSTGV 54 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H + D I Q++P ++ WH G GR N SIGIE+ + A + Sbjct: 55 SWHYTVD-DQVIYQHLPLNENGWHTGD----GRGNGNMKSIGIEICENTDGNFEQA-VEN 108 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-DWARFRVLVSKETT 183 + R L+ N+ H + K P W +F+ ++ T Sbjct: 109 AQWLIRKLMGDLGIPLSNVVPHKHWSG--KECPRKLLGRWDQFKAGIATART 158 >UniRef50_B7HAI4 N-acetylmuramoyl-L-alanine amidase n=19 Tax=Bacillus cereus group RepID=B7HAI4_BACC4 Length = 533 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 53/171 (30%), Gaps = 20/171 (11%) Query: 14 VPSPHYDCRPDD-ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 VP+ + + RP + +P + +H G Sbjct: 127 VPAGNDNIRPQNYMSPKYITIHETDNTSVGAGARNHAQYLYNQA--------VGNIDRAA 178 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H + D EI Q++P ++ WHAG G N SI IE+ Y+ A Sbjct: 179 SWHFTVD-DKEIYQHLPLNENGWHAGDGDGPG----NRESIAIEIAVNSDGNYSKA-VDN 232 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD---WARFRVLVSK 180 + L+ N+ H + K P + W F V Sbjct: 233 AKKLVAYLMKETGVPLNNIVKHQKWSG--KICPANMINNGQWDAFVNGVGG 281 >UniRef50_A7GU51 N-acetylmuramoyl-L-alanine amidase family 2 n=99 Tax=Bacillus cereus group RepID=A7GU51_BACCN Length = 843 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 46/155 (29%), Gaps = 16/155 (10%) Query: 14 VPSPHYDCRPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 VP + RP P + +H + Sbjct: 224 VPKGNPQIRPGYAMDPRYITIHETANERRGADAKNHAKYLMNQA--------TGSTSRGA 275 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H + D EI Q++P ++ WHAG N SIGIE+ Y A + Sbjct: 276 SWHFTVD-DKEIYQHLPLNENGWHAGDGT---NGTGNRQSIGIEIAVNQDGNYEKA-VEN 330 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGP 167 +T L+ N+ H + K P Sbjct: 331 ARKLTAYLMQELNIPIDNVKKHQHWSG--KNCPAK 363 >UniRef50_C4SAC3 Negative regulator of beta-lactamase expression n=4 Tax=Proteobacteria RepID=C4SAC3_YERMO Length = 209 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 37/107 (34%), Positives = 47/107 (43%), Gaps = 9/107 (8%) Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL--------AYTDAQYQ 131 D I V + RAWHAGVS + R ND SIGIE+ + Y Q Sbjct: 15 NDMRIFNLVDENARAWHAGVSSWAERTNLNDTSIGIEIVNLASDKEGVWDFPPYPIEQIA 74 Query: 132 QLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 + + ++ YP N+ H DIAP RK+DPGP F W Sbjct: 75 AVKQLAANILQRYPDITPVNVVAHSDIAPTRKSDPGPMFPWQELYEE 121 >UniRef50_Q9FC03 Putative secreted amidase n=2 Tax=Streptomyces RepID=Q9FC03_STRCO Length = 642 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 64/176 (36%), Gaps = 37/176 (21%) Query: 21 CRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR 79 RP + +V+H++ A S H ++ Sbjct: 261 DRPTNGIRIDTIVIHDLEST------------------YDAGVAGLANPTNPASTHYVMS 302 Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT---DTLAYTDAQYQQLAAV 136 G + Q VP A+HAG N SIGIE EG YT++QYQ A + Sbjct: 303 SSGAVTQMVPTKDIAFHAGN------YSTNLHSIGIEHEGFAAHGAAWYTESQYQATADL 356 Query: 137 TRALIDCYPDI--AKNMTGHCDIAP-------DRKTDPGPAFDWARFRVLVSKETT 183 + L + + +++ GH ++A DPG A+DW F L+ + Sbjct: 357 VKYLAERFGVPLDRQHVIGHDNVAGPNSALVAGMHWDPGYAWDWNHFMSLLGAPVS 412 >UniRef50_A5CBZ0 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Orientia tsutsugamushi RepID=A5CBZ0_ORITB Length = 366 Score = 119 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 67/179 (37%), Gaps = 31/179 (17%) Query: 17 PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 HY R D + L++H + +VS+H Sbjct: 93 NHYTQRNQDTSIKYLIMHYTVC---------------NFSSTAQEFTVNKPLLGQVSSHI 137 Query: 77 LIRRD-------GEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD-------- 121 +I G ++ +VP +K A+HAGVS +Q N SIGIE Sbjct: 138 VITEAEEGKTPAGILISFVPENKIAYHAGVSAWQNDTNLNSMSIGIEHVNRGFNTVNAKK 197 Query: 122 -TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 + Y Q V+ +I Y ++ GH DIA +RK+DPGP F W + + Sbjct: 198 EWVCYDKHQIATSGIVSSGIIRRYNIKPIHVLGHSDIAYNRKSDPGPLFPWGQLYHEYN 256 >UniRef50_P54450 N-acetylmuramoyl-L-alanine amidase cwlH n=1 Tax=Bacillus subtilis RepID=CWLH_BACSU Length = 250 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 55/172 (31%), Gaps = 21/172 (12%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 +P + + P + VHN + D + H F + + Sbjct: 8 FIPVSNDNRPGYAMAPAYITVHNTANTAKGA-------------DAKMHAKFVKNPNTSE 54 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H + D I Q++P D+ WHAG N SIGIE+ + A Sbjct: 55 SWHFTVD-DSVIYQHLPIDENGWHAGDGT---NGTGNRKSIGIEICENADGDFEKATSNA 110 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-WARFRVLVSKETT 183 + R L+ + H + K P D W F +S T Sbjct: 111 -QWLIRKLMKENNIPLNRVVPHKKWSG--KECPRKLLDHWNSFLNGISSSDT 159 >UniRef50_A4WS28 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Rhodobacteraceae RepID=A4WS28_RHOS5 Length = 290 Score = 119 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 79/220 (35%), Gaps = 59/220 (26%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 M +E L G + + + P ++++H+ + I + Sbjct: 1 MRIENHRLSGVAFQQAKNIGR---EIVPEIVILHDTAS----------------RITKGS 41 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120 + A VS H ++ DG +VQ VP ++RA HAG S + GR CNDFSIGIE+ Sbjct: 42 AATYLASAPNGVSVHFVVEIDGTVVQQVPTNRRAGHAGKSSFHGRTGCNDFSIGIEIVNP 101 Query: 121 D-------------------------------------TLAYTDAQYQQLAAVTRALIDC 143 + Y +AQ + + R+L D Sbjct: 102 GRMTRLSDAQCAAWYGETFATNLFGIREVETPQHGRGLWMPYPEAQMTAVLDLLRSLFD- 160 Query: 144 YPDIA-KNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKET 182 +++T H ++P RK D P F R + Sbjct: 161 -GIPTLRDITTHWYVSPGRKVDTNPLFPLEHVRARILGRD 199 >UniRef50_Q5WIB6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WIB6_BACSK Length = 301 Score = 119 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 63/174 (36%), Gaps = 24/174 (13%) Query: 11 ARRVPSPHYDCRPDDE-TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 + + S RP D PT + VH G A+ Sbjct: 4 VQDLISKSASNRPGDRLNPTHITVHETGNTSKGADAAMHARYIKG----------ADARA 53 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQ 129 +VS H + D +I+Q+VP ++RAWHAG N SIG+E+ + A Sbjct: 54 RKVSWHYTVD-DKQIIQHVPDNERAWHAG--------SGNAKSIGVEICVNSDGNFEKA- 103 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-DWARFRVLVSKET 182 A + R L+ + N+ H K P +W F+ L+S E Sbjct: 104 KSNAAWLLRNLMSKHNISLSNVVTHKYWTG--KNCPARLLKEWNAFKQLISNED 155 >UniRef50_C3GU84 N-acetylmuramoyl-L-alanine amidase / S-layer protein n=2 Tax=Bacillus thuringiensis RepID=C3GU84_BACTU Length = 747 Score = 118 bits (296), Expect = 8e-26, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 53/165 (32%), Gaps = 20/165 (12%) Query: 14 VPSPHYDCRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 VP+ + D RP + + +H + + Sbjct: 261 VPAGNLDIRPQNPMKAKYITIHETANTERGANAENHAKYLYNQA--------TQGTFRTA 312 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H + D EI Q++P ++ WHAG G+ N SIGIE+ Y A + Sbjct: 313 SWHFTVD-DKEIYQHLPTNENGWHAGD----GQGSGNMESIGIEIAVNQDGDYNKA-VEN 366 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF---DWARF 174 + L+ N+ H + K P +W F Sbjct: 367 AQKLVAHLMKQEGISGDNLRRHQQWSG--KKCPDIMISRGNWNNF 409 >UniRef50_D2AX66 Negative regulator of beta-lactamase expression-like protein n=12 Tax=Actinomycetales RepID=D2AX66_STRRD Length = 646 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 69/196 (35%), Gaps = 49/196 (25%) Query: 11 ARRVPSP----------HYD--CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDP 58 +P+P ++D RP ++ +V+H++ G Sbjct: 255 CEWIPAPYQALPDDDYGNHDLSNRPWNQKIDYIVIHDMEGYFGPSV-------------- 300 Query: 59 QAHPFFAEIAHLRVSAHC-LIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIEL 117 + S H L DG I Q++ W AG N SIG+E Sbjct: 301 ----DLVQNPARPASWHYSLRSSDGHIAQHLKTKDVGWQAGNWY------VNAKSIGLEH 350 Query: 118 EGT---DTLAYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAP-------DRKTDP 165 EG YT+A Y+ A + R L + ++ GH ++ DP Sbjct: 351 EGFLGEGAAWYTEAMYRTSAKLVRYLAMRHGVPLDRAHIIGHDNVPGTLPTTVRGMHEDP 410 Query: 166 GPAFDWARFRVLVSKE 181 GP +DWAR+ L+ K Sbjct: 411 GPFWDWARYFELLGKP 426 >UniRef50_A4CAP2 Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CAP2_9GAMM Length = 303 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 65/197 (32%), Gaps = 61/197 (30%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 S +Y+ R LV+H T D Q + VS+H Sbjct: 27 SENYNSR-----IRFLVMHYT------------------TGDWQ--DSLQALTKGEVSSH 61 Query: 76 CLIRRDG---------EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD----- 121 LI G + + V RAWHAGVS +QGR ND SIGIEL Sbjct: 62 YLIPEQGDASYPKSHLAVYRLVDEQHRAWHAGVSHWQGRSNINDQSIGIELINRAACAHQ 121 Query: 122 ---------------------TLAYTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAP 159 + Q Q L +++ ++ P + GH DI Sbjct: 122 PQVLTEIAPSAAFFDNQTFCQYPNFDLQQIQLLIELSKDILARNPDIDPTAVVGHSDIQL 181 Query: 160 DRKTDPGPAFDWARFRV 176 K DPGP F W Sbjct: 182 GNKQDPGPHFPWYTLYQ 198 >UniRef50_C4DKK4 Negative regulator of beta-lactamase expression n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DKK4_9ACTO Length = 637 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 51/197 (25%) Query: 11 ARRVPSP------------HYDC--RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTI 56 +P+P ++D RP D LV+H+ +T T+ Sbjct: 249 CEWIPAPYEKYGEKPVDYGNHDQANRPKDMDIDYLVIHDTETS------------YTNTL 296 Query: 57 DPQAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGI 115 P + VS +R DG + Q+V + AW AG N S+G+ Sbjct: 297 RLVQDPTY-------VSWQYTLRSFDGHVAQHVKSEDVAWQAGNW------SVNAHSMGL 343 Query: 116 ELEGTDTL--AYTDAQYQQLAAVTRALIDCYPDI--AKNMTGHCDIAP-------DRKTD 164 E EG +T+A Y+ A + + L + ++ GH ++ D Sbjct: 344 EHEGVAAEGSWFTEAMYRSSAKLVKYLSKKFDIPLNRDHIIGHDNVPGTAPAKIAGMHWD 403 Query: 165 PGPAFDWARFRVLVSKE 181 GP +DW + L+ Sbjct: 404 TGPFWDWQHYFDLLGAP 420 >UniRef50_UPI00019739B2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019739B2 Length = 248 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 59/173 (34%), Gaps = 27/173 (15%) Query: 18 HYDCRPDDE--TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 + RP + + +VVH + P + + VS++ Sbjct: 92 NPYSRPGTKLCSVNGIVVHYVGNPG--------TTAEQNRNYFEGLKAQTGENKVSVSSN 143 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLA 134 +I DGEI+Q VP D+ A+ N +I IE + +T+ Y L Sbjct: 144 FIIGMDGEIIQCVPIDEMAY--------ASNSRNSDTISIECCHPEADGRFTEETYDSLV 195 Query: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-----DWARFRVLVSKET 182 +T L K++ H D+ K P F +W F V K Sbjct: 196 RLTAWLCSELKLKPKDVIRHYDV--TEKACP-KYFVDHPQEWETFLKDVKKAM 245 >UniRef50_D2AYL5 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AYL5_STRRD Length = 666 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 63/179 (35%), Gaps = 38/179 (21%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 ++D +V+H GE I L +S H Sbjct: 294 NHDRYDGPRRIDYIVIH-----DGESSYDAITRLTRN--------------PTYLSWHFT 334 Query: 78 IRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT---DTLAYTDAQYQQL 133 +R DG I Q++ WHAG N SIG+E EG YT+A Y+ Sbjct: 335 LRSGDGHIAQHLRGSDIGWHAGNWY------VNTRSIGLEHEGYLAKGGAWYTEAMYRSS 388 Query: 134 AAVTRALIDCYPDI--AKNMTGHCDIAPDR-------KTDPGPAFDWARFRVLVSKETT 183 AA+ L Y ++ GH ++ DPGP +DWA + L+ T Sbjct: 389 AALVAHLARKYGVPLNRAHIIGHDNVPGTTPEGVRDMHQDPGPYWDWAHYFELLGSPLT 447 >UniRef50_B5CSL4 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B5CSL4_9FIRM Length = 258 Score = 116 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 30/171 (17%) Query: 18 HYDCRPDDE--TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 + RP +V+H + P F G D S++ Sbjct: 106 NPYSRPGTTIDEIHGIVIHYTANPGSTAQEN--RDYFNGLKDSH---------ETEASSN 154 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLA 134 ++ +GEI+Q VP + A+ N ++ IE D +T YQ + Sbjct: 155 FVVGLEGEIIQCVPTWEMAY--------ASNERNADTVSIECCHPDETGKFTKETYQSMV 206 Query: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-----DWARFRVLVSK 180 +T L Y + H D+ K P F W +F+ + K Sbjct: 207 QLTAWLCKKYNLNEDQVIRHYDVTG--KICP-KYFVEDEAAWKQFKNNIRK 254 >UniRef50_B3SF77 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SF77_TRIAD Length = 232 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 59/129 (45%), Gaps = 17/129 (13%) Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT 122 + +VS+H LI G+I Q VP + +AWHAG S + G+ N +SIGIE+ Sbjct: 7 YNILTKSDKVSSHFLISEKGDIHQLVPLEFKAWHAGESFWSGKNDINQYSIGIEIVNKGM 66 Query: 123 --------------LAYTDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPD--RKTDP 165 +++ Y LA + L YP KN+ GH DI RK DP Sbjct: 67 KLKFLNNKVQVLNINTFSNNIYFALAKLICELKKMYPKIQDKNIIGHSDITAKNLRKIDP 126 Query: 166 GPAFDWARF 174 G AFDW Sbjct: 127 GIAFDWKFL 135 >UniRef50_B6BGC2 B-N-acetylglucosaminidase, glycoside hydrolase family 3 protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGC2_9PROT Length = 555 Score = 116 bits (290), Expect = 5e-25, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 65/180 (36%), Gaps = 32/180 (17%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 +D + + P +V+H ++ E L T+ A+ L VS+H L+ Sbjct: 384 FDVQNINIKPKAIVLHWTAVMDFE---DCFKRLKGNTLYSDR-GDIADAGALNVSSHFLV 439 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT---LAYTDAQYQQLAA 135 RDG I Q +P + A H N SIGIE G + T Q Sbjct: 440 ARDGTIYQLMPDNWMARHV--------IGLNYSSIGIENVGGEDNVKDDLTPEQVDANIK 491 Query: 136 VTRALIDCYPDIAKNMTGHCDIA---------------PDRKTDPGPAFDWARFRVLVSK 180 + + L YP + + GH + +K DPG F R R V++ Sbjct: 492 LVKYLKAKYP-NIEYLIGHHEYTQMEKTPLWLEKDAEYRTKKADPGEKF-MNRVRKHVAE 549 >UniRef50_C8VXP6 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Peptococcaceae RepID=C8VXP6_DESAS Length = 208 Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 21 CRPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR 79 RP TP + VHN D AH F + ++ H + Sbjct: 15 NRPGNPMTPKYITVHNTGNTAKGA-------------DALAHAAFLKNSNDSTGWHFTVD 61 Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRA 139 D IVQ++P + AWHA G N SIGIE+ Y A+ + R Sbjct: 62 -DKRIVQHIPCWENAWHATDGHGPG----NVSSIGIEICVNSDGDYEKAEANA-IELIRY 115 Query: 140 LIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-WARFRVLVSKET 182 L+D Y N+ H P K P W F + + Sbjct: 116 LMDKYKIPLTNIVPHQKWYPA-KYCPYKILPRWNEFISEIKQPD 158 >UniRef50_P39800 N-acetylmuramoyl-L-alanine amidase xlyA n=4 Tax=Bacillus RepID=XLYA_BACSU Length = 297 Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 53/166 (31%), Gaps = 23/166 (13%) Query: 20 DCRPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 + RP TP + VHN + S H + Sbjct: 14 NNRPGYAMTPLYITVHNTANTAVGADAAAHARYLKN-------------PDTTTSWHFTV 60 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTR 138 D EI Q++P ++ WHAG G N SIGIE+ + A + + Sbjct: 61 D-DTEIYQHLPLNENGWHAGD----GNGSGNRASIGIEICENADGDFAKATANA-QWLIK 114 Query: 139 ALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-WARFRVLVSKETT 183 L+ + N+ H + K P D W F+ + + Sbjct: 115 TLMAEHNISLANVVPHKYWSG--KECPRKLLDTWDSFKAGIGGGGS 158 >UniRef50_B5HCN0 Secreted protein n=3 Tax=Streptomyces RepID=B5HCN0_STRPR Length = 895 Score = 115 bits (288), Expect = 7e-25, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 66/180 (36%), Gaps = 40/180 (22%) Query: 18 HY--DCRPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 +Y RP+ +V+H+ + G SA Sbjct: 264 NYTLGDRPNQGVDIRQIVIHDTEGGYDGSLAALTNPDVPG------------------SA 305 Query: 75 HCLIR-RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD---TLAYTDAQY 130 H LIR DG + Q + AWHAG N +IG+E EG YT+ QY Sbjct: 306 HYLIRASDGLVTQMIENKHLAWHAGNWT------HNMHAIGVEHEGYAIKEGKWYTEPQY 359 Query: 131 QQLAAVTRALIDCY--PDIAKNMTGHCDIA-------PDRKTDPGPAFDWARFRVLVSKE 181 Q A + + L Y P +++ GH ++A + D GP +DW + L+ Sbjct: 360 QSSADLVKFLATKYNVPLDREHIIGHDEVALQTDAGMANLHWDAGPYWDWNHYMGLMGAP 419 >UniRef50_UPI0001BC309D N-acetylmuramoyl-L-alanine amidase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC309D Length = 221 Score = 115 bits (288), Expect = 7e-25, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 29/173 (16%) Query: 18 HYDCRPDDE--TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 + RP D+ T +VVH + P + F AE+ + S+H Sbjct: 70 NPYSRPGDKVSKVTAIVVHYVGNPGTTAEQN--RSYFNN---------LAELKNAYASSH 118 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLA 134 ++ GEI+Q VP D+ A+ N +I IE D +TD Y L Sbjct: 119 YVVGLQGEIIQCVPLDEIAY--------ASNNRNYDTISIECCHQDAEGRFTDDTYNSLV 170 Query: 135 AVTRALIDCYPDIAK-NMTGHCDIAPDRKTDPGPAFD----WARFRVLVSKET 182 + AL Y + ++ H D+ K P + W F++ V E Sbjct: 171 RLVAALCRTYGLNPETDVIRHYDVTG--KLCPIYYVNNPDEWYAFKLSVKNEM 221 >UniRef50_UPI00016C05EA N-acetylmuramoyl-L-alanine amidase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C05EA Length = 197 Score = 114 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 30/171 (17%) Query: 17 PHYDCRPD--DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 P+ RP E + +VVH ++ P +F + S+ Sbjct: 40 PNPMSRPGFPMEKISGIVVHYVNNPGSTAE--------------NNRDYFNSLTERYASS 85 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT-LAYTDAQYQQL 133 H ++ GEI+ VP ++ A+HAG N IGIE+ DT ++D Y L Sbjct: 86 HYIVGLQGEIILCVPEEEVAYHAGN------RNVNYSHIGIEVCHPDTFGKFSDITYNSL 139 Query: 134 AAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAF----DWARFRVLVS 179 +T+ L Y ++ H D+ K P W +F ++ Sbjct: 140 IDLTKQLCRKYKLNPQTDVIRHYDV--TEKLCPAYYVHNQEAWDKFIDDIT 188 >UniRef50_Q2SEW1 Negative regulator of beta-lactamase expression n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEW1_HAHCH Length = 199 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 60/188 (31%), Gaps = 35/188 (18%) Query: 7 WLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAE 66 A P+ ++ P +++H P Sbjct: 18 DYPNALWSPAANFRIPPGRRDIRYIIIHITGGPALTERNA-----------------LNT 60 Query: 67 IAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG----TDT 122 SAH ++ R+G +VQ V A H + N SIGIE Sbjct: 61 FRAGPASAHYIVNREGRVVQTVREAHIANHVDNIH----SQTNRESIGIEHVNPWDPNPR 116 Query: 123 LAYTDAQYQQLAAVTRALIDCYPDIAKN--------MTGHCDIAP--DRKTDPGPAFDWA 172 TDAQY A + L Y ++ + GH + AP +T P PA++W Sbjct: 117 TYPTDAQYMASARLVAWLCHRYGIPVRHETAPHTAGIRGHIEEAPHSGHRTCPNPAWNWD 176 Query: 173 RFRVLVSK 180 + LV Sbjct: 177 LYIDLVRS 184 >UniRef50_C0WEF9 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WEF9_9FIRM Length = 221 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 62/181 (34%), Gaps = 36/181 (19%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 HY D P +VVH + E + A + L V A L Sbjct: 55 HYGREMTDIKPRAVVVHWTANDSQEGTYQFFYAEENPRLSY---------GTLNVGAQFL 105 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAA 135 + RDG I Q +P A HA N +IGIE G T+AQ + A Sbjct: 106 VGRDGAIWQLMPETALARHA--------IGLNWCAIGIENVGGARGKEDLTEAQLRANIA 157 Query: 136 VTRALIDCYPDIAKNMTGHC-------------DIAPD--RKTDPGPAFDWARFRVLVSK 180 + L D YP + GH D+ K DPGP F R ++K Sbjct: 158 LISYLKDKYP-TLTTVLGHYEQDKAKQTDLWREDVPNYYHGKIDPGPTF-MKGLREALTK 215 Query: 181 E 181 + Sbjct: 216 K 216 >UniRef50_A3HZ10 Putative uncharacterized protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HZ10_9SPHI Length = 223 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 60/175 (34%), Gaps = 31/175 (17%) Query: 20 DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR 79 D P ++VVH ++ E D+ G + L VS+ LI Sbjct: 55 DQTEATIDPKIVVVHWTAINSVEATFDVFDSPTLG-----GREDLRNASGLNVSSQFLID 109 Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRA 139 RDG I + +P A H N +IGIE G+ T Q + + R Sbjct: 110 RDGTIFRLLPETTFARH--------TIGLNYTAIGIENVGSPDDPLTKEQLKANEMLIRH 161 Query: 140 LIDCYPDIAKNMTGHCDIA---------------PDRKTDPGPAFDWARFRVLVS 179 L YP + GH + KTDPG AF + R ++ Sbjct: 162 LRKKYPID--YVIGHHEYQNFQETDFWKEADPNYRTVKTDPGDAF-MEKLRKNLA 213 >UniRef50_B2A1Q6 N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1Q6_NATTJ Length = 235 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 24/168 (14%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +Y R ++T + LV+H+ D +AH + + SAH Sbjct: 11 NYSSR-QNQTISYLVIHDTGNSRPGA-------------DAKAHYHYFNAGNRSASAHYF 56 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVT 137 + D +I+Q V +WH G + + N SIGIE+ Y A +Q +T Sbjct: 57 VD-DTQILQLVEDHHASWHCGDGRGR-YGITNSNSIGIEICINSDGNYAKA-VEQTIKLT 113 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-----WARFRVLVSK 180 L + Y + H D++ RK PG W + V Sbjct: 114 AYLAEKYTIPHNKIVRHYDVS--RKICPGTMSRDNWALWYELKDDVLA 159 >UniRef50_C4ZEY9 N-acetylmuramoyl-L-alanine amidase n=3 Tax=Clostridiales RepID=C4ZEY9_EUBR3 Length = 248 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 30/171 (17%) Query: 16 SPHYDCRPDD--ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 +P+ RP E +VVH + P F G AE + S Sbjct: 83 TPNPYSRPQKALEKVNGIVVHYTANPGTSARQN--RDYFNG---------LAETKKTKAS 131 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELE-GTDTLAYTDAQYQQ 132 +H +I +GEIVQ +P ++ ++ N +I IE +T + D+ YQ Sbjct: 132 SHFVIGLEGEIVQCIPCNEISY--------ASNNRNSDTISIECCIEDETGKFNDSTYQS 183 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-----DWARFRVLV 178 L +T L+ Y A ++ H D+ K P F W +F + Sbjct: 184 LIELTTWLMGRYDLSADDVIRHYDVTG--KKCP-LYFVEHEDAWEQFHKDL 231 >UniRef50_Q04T28 Amidase n=4 Tax=Leptospira RepID=Q04T28_LEPBJ Length = 188 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 63/178 (35%), Gaps = 26/178 (14%) Query: 16 SPHYDCRPDDE--TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 +P+ RP D+ +V+H +LP I F S Sbjct: 14 TPNPHSRPGDKIKEVKGIVLHWTALPNATAQN--IRDYFE---------SLKAPEGRFAS 62 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQ-------GRERCNDFSIGIE-LEGTDTLAY 125 AH + GEIVQ +P D+ A+H G Y G + N ++IGIE T + Sbjct: 63 AHFAVGLVGEIVQCIPLDEIAYHCGSRTYTSEKEKRLGPDSPNFYTIGIEQCVQDMTGKF 122 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF----DWARFRVLVS 179 T+ A +T L Y ++ H I K P DW F+ V Sbjct: 123 TEKTLDSAARLTAQLCLKYNLDVNDLWTHQGI-VGWKDCPRWYNTHPKDWIGFKKRVE 179 >UniRef50_C5PKQ4 Putative uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C5PKQ4_9SPHI Length = 237 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 64/178 (35%), Gaps = 31/178 (17%) Query: 20 DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR 79 D + P ++VVH + + + P + + L VS+ +I Sbjct: 70 DQKKAVIKPQIVVVHWTANNSVKSTFNAF-----NPVQLPGRPELTKASKLNVSSQYVID 124 Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRA 139 RDG I Q++P A H N +IGIE G++ TDAQ + + Sbjct: 125 RDGTIYQFLPDTVFARH--------TIGLNYCAIGIENIGSEKNPLTDAQLKANTQLIDL 176 Query: 140 LIDCYPDIAKNMTGH------------CDIAP---DRKTDPGPAFDWARFRVLVSKET 182 L + YP + GH + P K+DPG F R R + T Sbjct: 177 LSEKYPIEL--VIGHLEYKQFKKTKWWKETDPNYITGKSDPGLDF-MKRLRSGLKNTT 231 >UniRef50_Q30PL8 Negative regulator of AmpC, AmpD n=4 Tax=Bacteria RepID=Q30PL8_SULDN Length = 219 Score = 113 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 57/180 (31%), Gaps = 31/180 (17%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 + D + TP ++V+H+ ++ P A L VSAH + Sbjct: 44 NLDVKDIKITPKIIVIHHTAIDDFNASLSCFKD----QTLPNARADIHRGGALNVSAHFI 99 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAA 135 + RDG I Q +P D A H N SIGIE G T Q + Sbjct: 100 VDRDGTIHQLMPLDIMARHV--------IGLNYNSIGIENVGGQNSKDNLTPEQLRANIE 151 Query: 136 VTRALIDCYPDIAKNMTGHCDIA---------------PDRKTDPGPAFDWARFRVLVSK 180 + L +P + GH + K DP F + R + Sbjct: 152 LVAELKRRFP-EIDYVIGHYEYRCFEKDELWLEVDKKYRTYKDDPSSRF-MSAIREQIEG 209 >UniRef50_UPI0001BCD943 Peptidoglycan-binding domain 1 protein n=2 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCD943 Length = 288 Score = 112 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 60/178 (33%), Gaps = 12/178 (6%) Query: 11 ARRVPSPHYDCRPDDETPTLLVVHNISLP-PGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 VP ++ RP +P + H+ + + G + E+ Sbjct: 16 VVEVPGWKHEGRPGTFSPRGVAAHHTADTLSDHYSGAELTRREEDYARIGLSTGHRELPG 75 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGV----SQYQGRERCNDFSIGIELEGTDTLAY 125 + RDG + V RA HAG + N +IGIE + + Sbjct: 76 PL--CQIGLGRDGTVY--VIAAGRANHAGKVRSWGGWVSAGDGNTQAIGIEAMNSAYEGW 131 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP---GPAFDWARFRVLVSK 180 +D Q + + AL D Y + H +I+ K DP G D FR V+ Sbjct: 132 SDTQSRAYHRLCAALCDHYGWPRSRVAAHGEISTSGKWDPGVNGRLIDMNAFRAAVAG 189 >UniRef50_A0M513 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gramella forsetii KT0803 RepID=A0M513_GRAFK Length = 223 Score = 111 bits (278), Expect = 1e-23, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 58/171 (33%), Gaps = 31/171 (18%) Query: 27 TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ 86 P ++V+H +P E F + PQ+ + + L VS+H L+ ++G I + Sbjct: 59 DPKMIVLHWTEIPTLEDSF----RAFKNSKLPQSREAISGASQLNVSSHFLVDKNGAIYR 114 Query: 87 YVPFDKRAWHAGVSQYQGRERCNDFSIGIELE-GTDTLAYTDAQYQQLAAVTRALIDCYP 145 +P A H N +IG+E GT T AQ + L D Y Sbjct: 115 LMPETVMARHV--------IGLNHTAIGVENVGGTKDTPLTAAQVASNIWLVNYLSDKYN 166 Query: 146 DIAKNMTGHCDIA---------------PDRKTDPGPAFDWARFRVLVSKE 181 + + GH + K DPG F R Sbjct: 167 I--QYVIGHYEYTNFEGHDLWLEKDSGYRTMKVDPGEEF-MKEVRNATQNR 214 >UniRef50_A5GTP3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Synechococcus sp. RCC307 RepID=A5GTP3_SYNR3 Length = 297 Score = 111 bits (278), Expect = 1e-23, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 70/189 (37%), Gaps = 41/189 (21%) Query: 18 HYDCR--------PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 +Y R D TP ++V+H G D Sbjct: 119 NYGERVHLDAQGQRIDPTPAVIVLHETVYSLGSA-INTFTTPHPNDAD------------ 165 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR---------ERCNDFSIGIELEGT 120 + S H L+ + GEIVQ V KRA+ AG S + GR N+F++ + LE Sbjct: 166 -QASYHTLVGQKGEIVQVVDPSKRAYGAGHSAFDGRWVFTSKHFSGSLNNFALHVSLETP 224 Query: 121 D--------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIA-PDRKTDPGPAFDW 171 YT AQY L+ V + Y +T H + + ++DP +FDW Sbjct: 225 PDGATSAQKHSGYTPAQYDALSRVLADWMVRYKIEPHAITTHRHVDLGNARSDP-RSFDW 283 Query: 172 ARFRVLVSK 180 + + ++ Sbjct: 284 QQLQTRLTA 292 >UniRef50_C3EV93 N-acetylmuramoyl-L-alanine amidase n=11 Tax=Bacillus thuringiensis RepID=C3EV93_BACTK Length = 318 Score = 111 bits (278), Expect = 1e-23, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 50/157 (31%), Gaps = 19/157 (12%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 +P + + P + +H + VS Sbjct: 19 IPKGNRNRPAYSMNPRYITIHTTANQNAGTDARAHARYVNN-----------GGGSSSVS 67 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQL 133 H + D IVQ++P ++ WHAG G N SIGIE+ + A Sbjct: 68 WHFTVD-DNRIVQHLPLNENGWHAGDGNGAG----NRSSIGIEICENRDGNFEKA-LTHA 121 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD 170 A + + L+ N+ H + K P P F+ Sbjct: 122 AGLVKFLMAHLGLKIGNVVSHQHWSG--KNCPRPIFN 156 >UniRef50_Q7NG55 Glr3318 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NG55_GLOVI Length = 228 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 65/180 (36%), Gaps = 31/180 (17%) Query: 18 HYDC--RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 HYD R P ++VVH G+ A FT P + L VS H Sbjct: 56 HYDPEARDIAIIPRMVVVHWT----GDGNLTSAFATFTPDRLPSVRADLKKGGALNVSTH 111 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAA 135 ++ RDG I + + + A H N +IGIE G TDAQ A Sbjct: 112 FVVDRDGTIYRLMDEKRLARHV--------IGLNWTAIGIENIGGPRRPLTDAQLAANAW 163 Query: 136 VTRALIDCYPDIAKNMTGHCDIAP---------------DRKTDPGPAFDWARFRVLVSK 180 + R L + +P + GH + K+DPG F AR R + + Sbjct: 164 LVRDLANRHP-TIAYLIGHHEYGRFRGSLLWRERVAGYFTGKSDPGADF-MARLRARLQE 221 >UniRef50_Q8XMX3 Probable N-acetylmuramoyl-L-alanine amidase n=8 Tax=Clostridium perfringens RepID=Q8XMX3_CLOPE Length = 222 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 26/160 (16%) Query: 24 DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGE 83 +P L++H+ + E H F + + H IR DG Sbjct: 85 KGNSPKRLIIHHSATDSPE-------------TPEDIHKFHLDNGWSGIGYHFYIREDGT 131 Query: 84 IVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT-DTLAYTDAQYQQLAAVTRALID 142 I + + HA + N ++GI +EG + +AQ L + L Sbjct: 132 IYKGRDENVIGAHA--------KNANYNTLGICIEGNFEKEGLKEAQKNSLVKLGTYLSL 183 Query: 143 CYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKET 182 YP K++ H ++ PG F + + +E Sbjct: 184 KYPI--KDILPHREV--VDTLCPGKLFPMDNIKSSIIEEI 219 >UniRef50_C7Q860 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q860_CATAD Length = 589 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 56/170 (32%), Gaps = 35/170 (20%) Query: 20 DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR 79 RP + +H+I + + VS H +I Sbjct: 237 SNRPTSYAVYDVTIHDIEGTAQDALTT------------------FQDISKGVSVHYVID 278 Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG---TDTLAYTDAQYQQLAAV 136 DG + Q V A+HAG Y N+ ++GIE G T Y +Y A + Sbjct: 279 SDGTVYQVVREKDIAYHAGNFYY------NEHAVGIEHAGIDATGYQWYNATEYLASAKL 332 Query: 137 TRALIDCYPDIAK--NMTGHCDI-APD-----RKTDPGPAFDWARFRVLV 178 L + Y ++T H AP DPG + W + L+ Sbjct: 333 VAYLANKYNIPLDHAHITAHGTTPAPTTASSPNHVDPGKYWLWDYYFGLI 382 >UniRef50_A5Z412 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z412_9FIRM Length = 343 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 49/165 (29%), Gaps = 27/165 (16%) Query: 25 DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEI 84 + +V+H +A+ + A SAH + D EI Sbjct: 35 SRSVAYVVMHYTGNS---------------KDTAKANANYFGGAGRNASAHFFVD-DAEI 78 Query: 85 VQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE-LEGTDTLAYTDAQYQQLAAVTRALIDC 143 Q V AWH G Y+ N SIGIE +D + A + L Sbjct: 79 YQSVELRDTAWHCGAKSYKHGSCRNANSIGIEMCCTAGNYRISDRTKENAAYLCAFLCKM 138 Query: 144 YPDIA----KNMTGHCDIAPDRKTDPGPAF----DWARFRVLVSK 180 A + H D+ K P +W F+ V Sbjct: 139 LGIGAGGVDSYVLRHYDVTG--KNCPAQMVSNPTEWQEFKNKVKG 181 >UniRef50_A8RYS3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RYS3_9CLOT Length = 329 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 62/172 (36%), Gaps = 24/172 (13%) Query: 18 HYDCRP--DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 + RP + +V+H ++ P F D + + S+H Sbjct: 169 NIFSRPDVGRQKVDKIVIHYVANPGSTAKNN--RDYFDSLADQD-----PQKSGSSASSH 221 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLA 134 ++ +GE++Q +P ++ A+ N+ ++ IE+ D + DA Y+ L Sbjct: 222 FVVGLEGEVIQCIPVNEIAY--------ANAPLNNTTVAIEVCHPDDSGKFNDATYESLV 273 Query: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD----WARFRVLVSKET 182 +T L ++ H D+ + K P + W +F V Sbjct: 274 DLTAFLCRQLKLTPGDVIRHYDV--NEKLCPKYYVEHEDAWEQFLKDVKTAM 323 >UniRef50_A0Q0S8 N-acetylmuramoyl-L-alanine amidase cwlL (Cellwall hydrolase) (Autolysin) n=7 Tax=Clostridiales RepID=A0Q0S8_CLONN Length = 431 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 47/148 (31%), Gaps = 21/148 (14%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +Y+ +V+H+ A+ + + SAH Sbjct: 163 NYN-HSSGNNIKFIVMHDTGNY---------------KDTALANANYFGGGNRNASAHYF 206 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVT 137 + + IVQ V AWH G N SIGIE+ + DA + Sbjct: 207 VDEN-NIVQVVEDSNAAWHCGDGH-GNYGITNHNSIGIEMCNSGGY-IADATINNALWLV 263 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDP 165 + L Y N+ H D + RK P Sbjct: 264 KKLQAKYNIDNDNVVRHYDAS--RKNCP 289 >UniRef50_C2TTH9 N-acetylmuramoyl-L-alanine amidase / S-layer protein n=3 Tax=Bacillus cereus group RepID=C2TTH9_BACCE Length = 588 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 50/160 (31%), Gaps = 17/160 (10%) Query: 8 LVGARRV-PSPHYDCRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 + + P+ + D RP + + +H + Sbjct: 120 IPFVEWIIPAGNTDIRPANPMKAKYITIHETANTAPGANAESHAKYLYNQA--------T 171 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 S H + D EI Q++P ++ WHAG G N SIGIE+ Y Sbjct: 172 SGTVRTASWHFTVD-DKEIYQHLPTNENGWHAGDG---GTGTGNRESIGIEIAVNQDGDY 227 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 A + + L+ A N+ H + K P Sbjct: 228 NKA-VENAKKLVAHLMKQEGISASNLRRHEQWSG--KKCP 264 >UniRef50_B1V3W0 N-acetylmuramoyl-L-alanine amidase, family 2 n=8 Tax=Clostridium perfringens RepID=B1V3W0_CLOPE Length = 553 Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 24/170 (14%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +Y P +V+H+ +FA + + SAH + Sbjct: 81 NYSQ-GITINPKYIVIHDTDNRQAGANAMANRN------------YFANHPNAKASAHYI 127 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVT 137 I G I+Q + + WH G N +I IEL + D + +T Sbjct: 128 IDE-GNIIQALEDTWKGWHVGDGNNPNIN--NSTTIAIELCVNKGNDF-DKTLENGIELT 183 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-----WARFRVLVSKET 182 + L++ Y A+N+ H D + KT + W F+ +S Sbjct: 184 KYLMNKYDIPAENVVMHRDASG--KTCSRMMIEDRPSLWPYFKERISGGD 231 >UniRef50_A5IAD5 N-acetylmuramoyl-L-alanine amidase; amidase 2 n=7 Tax=Bacteria RepID=A5IAD5_LEGPC Length = 232 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 29/160 (18%) Query: 27 TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ 86 P ++V+H +P + D T P+ + L VS+H L+ RDG I Q Sbjct: 74 EPKMIVLHWTCIPSLDTTFRIFDPPALPTSSPRRNE---LPGDLNVSSHFLVDRDGTIYQ 130 Query: 87 YVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAAVTRALIDCY 144 +P A H N ++IGIE G TD Q + A + L + Y Sbjct: 131 LMPETWMARHV--------IGLNHYAIGIENIGGVDSKDDLTDEQVKANAFLVCYLKNKY 182 Query: 145 PDIAKNMTGHCDI------------AP---DRKTDPGPAF 169 P K + GH + P KTDPGP F Sbjct: 183 P-QIKYLIGHNEYLQYKGTALWLEKDPNYQTDKTDPGPTF 221 >UniRef50_B1I5B9 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Peptococcaceae RepID=B1I5B9_DESAP Length = 173 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 21/157 (13%) Query: 26 ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIV 85 T L++H+ + Q + + + H +I RDG +V Sbjct: 1 MKWTHLIIHHTGTEEKDAR--------------QVREYHRRLGWRDIGYHYVIERDGRVV 46 Query: 86 QYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT-DTLAYTDAQYQQLAAVTRALIDCY 144 P R H N ++G+ + G + Q L + L+ Y Sbjct: 47 PGRPPSMRGAHC------LAGGMNHKALGVAVIGNLEARPPRPEQLAALQELAARLMAEY 100 Query: 145 PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 + GH ++ PG D R R ++++ Sbjct: 101 RIPVAQVLGHREVPGAATACPGRFLDLGRLRAVLARP 137 >UniRef50_C0Z5F5 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z5F5_BREBN Length = 278 Score = 109 bits (273), Expect = 5e-23, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 60/155 (38%), Gaps = 24/155 (15%) Query: 18 HYDCRPDDET-PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 + + RP + P +V+H + + A+ + SAH Sbjct: 10 NVNSRPKKKIVPKGVVIHWTANERSGA-------------NATANRNYFNKPTTVASAHY 56 Query: 77 LIRRDGEIVQYVPFDKRAWHAGVSQYQGR------ERCNDFSIGIELEGTDTLAYTDAQY 130 ++ D +I++ +P D+ +H G Y N+ +IGIE+ ++ Y Sbjct: 57 IVD-DKQIIRCLPEDEMGYHVGAQTYSQAALNKLSNYPNNCTIGIEMCVNADGSF-AKMY 114 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP 165 +Q A+T ++ + +++ H DI K P Sbjct: 115 EQTVALTADILKRHGWGVEHLWRHYDITG--KNCP 147 >UniRef50_Q925X1 Lin2374 protein n=2 Tax=Listeria RepID=Q925X1_LISIN Length = 316 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 64/182 (35%), Gaps = 36/182 (19%) Query: 18 HYDCRPDDE--TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 + RP + + +V+H + P +F ++ SAH Sbjct: 12 NQFSRPGYKLLRVSKIVMHYTANPGASAD--------------NHRRYFRDLKERYASAH 57 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGV------------SQYQGRERCNDFSIGIELEGTDTL 123 I D E + +P ++ A+HA S Y+G N SIGIE+ Sbjct: 58 IFID-DNEAICIIPLNEVAYHANERSCKLTALQASTSYYRG-GNANLTSIGIEMCLDKNG 115 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF----DWARFRVLVS 179 T A + + V L Y A ++ H D+ K P P + RFR V+ Sbjct: 116 NITAATFNRSVDVAAELCKTYDLTASDIIRHYDVTG--KNCPAPWVAKPSELTRFRNAVN 173 Query: 180 KE 181 + Sbjct: 174 AK 175 >UniRef50_D2QH68 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QH68_9SPHI Length = 229 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 35/170 (20%) Query: 27 TPTLLVVHNISLPPGEFGGPWID-ALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIV 85 P ++V+H ++P + ++ TG D QA + L +S L+ RDG I Sbjct: 68 KPKMIVLHWTAVPTLRAAFDLFNPSVLTGRADLQAA------SRLNISVPFLVDRDGTIY 121 Query: 86 QYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYP 145 + +P A H N +IGIE G D TDAQ + R L Y Sbjct: 122 RLLPDTVFARHC--------IGLNHCAIGIENVGNDN--LTDAQLDANVQLVRYLKQRYA 171 Query: 146 DIAKNMTGHCDIAP---------------DRKTDPGPAFDWARFRVLVSK 180 + + GH + KTDPG F R V + Sbjct: 172 I--EYLIGHYEYKDFIGTPLWKETDSTYLTGKTDPGREF-MKNVRKRVKE 218 >UniRef50_C0F005 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F005_9FIRM Length = 254 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 52/170 (30%), Gaps = 28/170 (16%) Query: 18 HYDCRPDD--ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 + R +V+H + P F + + S+H Sbjct: 101 NPYSRSGIALRKVKGVVIHYVENPGSTAKEN--RDYFNNLQNTHL---------TKASSH 149 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLA 134 ++ DGE++Q +P + ++ N +I IE + D Y Sbjct: 150 YIVGLDGEVIQCIPQSEISY--------ASNNRNKDTISIECCHPKKNGKFNDKTYNSAV 201 Query: 135 AVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD----WARFRVLVSK 180 +T + Y +KN+ H D+ K P W F V + Sbjct: 202 RLTAWICKTYGLSSKNVIRHYDVTG--KMCPRYYVKHEQAWKDFCNKVQE 249 >UniRef50_B7INM6 N-acetylmuramoyl-L-alanine amidase n=60 Tax=Bacillus cereus group RepID=B7INM6_BACC2 Length = 599 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 57/177 (32%), Gaps = 21/177 (11%) Query: 8 LVGARR-VPSPHYDCRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65 + VP+ + D RP + + +H + Sbjct: 155 VPFVEWIVPAGNPDIRPANPMKARYITIHETANTAAGANAENHAKYLYKQA--------T 206 Query: 66 EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125 E S H + D +I Q++P ++ WHAG G N SIGIE+ Y Sbjct: 207 EGTFRTASWHFTVD-DKQIYQHLPTNENGWHAGD----GDGSGNRESIGIEIAVNQDGDY 261 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF---DWARFRVLVS 179 A + + L++ A ++ H + K P +WA F + Sbjct: 262 NKA-LENAKRLAGYLMNKEGIGADHIYKHQQWSG--KKCPDILISRGNWAGFVQGIQ 315 >UniRef50_Q31KQ2 N-acetylmuramoyl-L-alanine amidase, family 2 n=2 Tax=Synechococcus elongatus RepID=Q31KQ2_SYNE7 Length = 317 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 71/195 (36%), Gaps = 41/195 (21%) Query: 11 ARRVPSPHYDCR--------PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHP 62 + ++ R P D +L+V+H + + + D Sbjct: 113 SAWAHPTNFGDRAAVDRNGQPVDNRISLIVLHET-VASADSAINFFQTPHPRDED----- 166 Query: 63 FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR---------ERCNDFSI 113 + S H LIRR+G IV VP +KRA+ AG S ++G N+FS+ Sbjct: 167 --------QASYHALIRRNGTIVYTVPPEKRAFGAGSSSFRGEAVRFNPKLPGSVNNFSL 218 Query: 114 GIELEGTD--------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP-DRKTD 164 + LE YT QY LA + + + Y +T H + + D Sbjct: 219 HVSLESPADGRDNRRRHSGYTARQYDSLALLAQQWMTTYTIPGDRITTHAAVDRSGSRMD 278 Query: 165 PGPAFDWARFRVLVS 179 P +F WAR + Sbjct: 279 P-RSFQWARLAQRLQ 292 >UniRef50_Q7V7M8 N-acetylmuramoyl-L-alanine amidase (Family 2) n=2 Tax=Prochlorococcus marinus RepID=Q7V7M8_PROMM Length = 312 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 41/191 (21%) Query: 16 SPHYD--------CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 S +Y R D TP+++++H + D Sbjct: 125 SSNYGKRYRWDLYGRRVDPTPSVVILHET-TDSYQSALYAFKDYHRKDED---------- 173 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG---------RERCNDFSIGIELE 118 +VS H LI DG+I+ V RA+ AG S + G + N+F++ + LE Sbjct: 174 ---QVSYHTLITLDGQIIDVVDPLNRAYGAGNSAFLGEWVVTNPRFKGSVNNFALHLSLE 230 Query: 119 GT--------DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIA-PDRKTDPGPAF 169 + Y+D QY LA V +D + +N+T H + ++DP +F Sbjct: 231 TPWDGRNGYLNHSGYSDKQYDSLALVLADWMDRFNIPPENITTHQHVDLAGERSDP-RSF 289 Query: 170 DWARFRVLVSK 180 DW+ + ++ Sbjct: 290 DWSNLQRRLAA 300 >UniRef50_B0MAX7 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAX7_9FIRM Length = 246 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 54/184 (29%), Gaps = 30/184 (16%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 + +Y + + +VVH + + + A Sbjct: 8 KFAHKSNYGGKRSTKDIDYIVVHYTGNS---------------KDTALNNCKYFQGASKG 52 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGV--SQYQGRERC-----NDFSIGIELEGTDTLA 124 SAH + + + V ++ AW G S N S+ +E+ Sbjct: 53 ASAHYFVDGGKYVYKSVAVNRVAWAVGGCYSTVGAAGNYYKKCTNANSLSVEMCNVTRK- 111 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF-----DWARFRVLVS 179 Q + + L+ Y A ++ H D+ + K P P W F+ + Sbjct: 112 VPANVRDQTIELVKFLMQKYGVPASHVIRHWDV--NGKNCPMPWIGADNNGWKTFKNAIG 169 Query: 180 KETT 183 ++ Sbjct: 170 GQSV 173 >UniRef50_Q5Z3U1 Putative uncharacterized protein n=1 Tax=Nocardia farcinica RepID=Q5Z3U1_NOCFA Length = 270 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 44/140 (31%), Positives = 59/140 (42%), Gaps = 8/140 (5%) Query: 48 IDALFTGTIDPQAHP-FFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQG-- 104 + A TG+ P +P A+ L +++ + RDG V V AWHAG Y G Sbjct: 38 VIAHHTGSNPPSNNPGHIAQHPQLGLASQLHLSRDG--VYTVCGVGIAWHAGNGSYPGLP 95 Query: 105 RERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP--DRK 162 N +IGIE E T ++ QY A++ A N+ GH + A K Sbjct: 96 TNDANRVTIGIEAENNGTEGWSPRQYTAYVKGVAAILRKLGKGAGNVIGHKEWAGAAQGK 155 Query: 163 TDPGPAFDWARFRVLVSKET 182 DPG D RFR V K Sbjct: 156 WDPGGM-DMNRFRADVQKAI 174 >UniRef50_A6NPI6 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPI6_9BACE Length = 218 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 29/185 (15%) Query: 2 LLEQGWLVGARRVPSPHYDCRPDDE--TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQ 59 + + V + +P Y RP ++ +VVH P T + Sbjct: 55 VPDAPEWVERQLLPINEY-SRPGEKLTAVNGVVVHYTGNPG-----------TTAQQNRS 102 Query: 60 AHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG 119 A+ S++ +I +GEI++ VP D+ A+ + N ++ IE+ Sbjct: 103 YFAGLAQSGETFASSNFVIGLEGEILECVPLDEVAY--------ASSQRNYDTLSIEVCH 154 Query: 120 TDTLA-YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD----WARF 174 D +T A Y L + + L+D Y + H D+ K P W F Sbjct: 155 PDDTGEFTQASYDALVKLVQWLVDTYDLDRDQILRHYDVTG--KECPRYYVQHPEAWEAF 212 Query: 175 RVLVS 179 + Sbjct: 213 LDDLE 217 >UniRef50_P36550 N-acetylmuramoyl-L-alanine amidase cwlL n=4 Tax=Bacillus licheniformis RepID=CWLL_BACLI Length = 360 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 45/156 (28%), Gaps = 19/156 (12%) Query: 19 YDCRPDDET--PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 RP + +V+H + P F GT I SAH Sbjct: 13 QYTRPGLKLAGVKGIVMHYTATPGASALNE--RDYFNGTCIA--------IKRKASSAHY 62 Query: 77 LIRRDGEIVQYVPFDKRAWHAGVSQYQGRE----RCNDFSIGIELEGTDTLAYTDAQYQQ 132 + R E +P ++ A+HA N SI +E+ Q Sbjct: 63 FVDR-KEAQHIIPENEVAYHAHDKNRCYVSFLKPNANTKSISVEMCVEKDGMIHSETVQN 121 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPA 168 A + L Y + H D+ K P P Sbjct: 122 AAELVADLCKRYGLSTNKIVRHYDV--TNKICPAPW 155 >UniRef50_B9XDJ7 N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=bacterium Ellin514 RepID=B9XDJ7_9BACT Length = 1809 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 63/215 (29%), Gaps = 60/215 (27%) Query: 1 MLLEQGWLVGARRVP--SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDP 58 M+ A S H+ +V+H++ Sbjct: 34 MVTASTDYGPAVWRQAYSGHWSTSGYGHK--FVVIHDMEGYYA----------------- 74 Query: 59 QAHPFFAEIAHLRVSAHCLIR---------RDGEIVQYVPFDKRAWHAGVSQYQGRERCN 109 + + + + + S H + GE+ Q V AWH N Sbjct: 75 -STISYFQRSSTQASVHYCVNGKQDSSTDYPAGEVTQMVREAYYAWHV--------LCWN 125 Query: 110 DFSIGIELEGTDTLA--YTDAQYQQLAAVTRALIDCYPD--IAKNMTGHCDIAP------ 159 + G E EG + YTDA Y + R L D Y ++ GH Sbjct: 126 HYCAGTEHEGFASNPAWYTDAMYNSSGLLQRHLCDHYGIAKDRNHIVGHNAWQSSAWRTY 185 Query: 160 -----------DRKTDPGPAFDWARFRVLVSKETT 183 + TDPGP ++W + +V ++ Sbjct: 186 ASANFGIDPNCNSHTDPGPYWNWTKLMNVVLGTSS 220 >UniRef50_C1I9T8 N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9T8_9CLOT Length = 272 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 56/162 (34%), Gaps = 23/162 (14%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P TP + +HN + + + VS H I D Sbjct: 18 PYSMTPKGICIHNTA----------------NDASASNEISYMQSNTNSVSFHIGID-DV 60 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALID 142 E +Q +PF++ AWHAG G N S+ I + + +A+ + AL+ Sbjct: 61 EAIQGIPFNRNAWHAGDGS-TGDGNRNYISVEICYSKSGGTRFINAEKRAAKE-VAALLK 118 Query: 143 CYPDIAKNMTGHCDIAPDRKTDPGPAFD--WARFRVLVSKET 182 Y + H D + K P D W RF ++ E Sbjct: 119 QYGWGIAQIRKHQDFSG--KYCPHRTLDMGWQRFLNMIQAEI 158 >UniRef50_A7VR21 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR21_9CLOT Length = 214 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 59/174 (33%), Gaps = 32/174 (18%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 +P T + +H + D +AH + V Sbjct: 65 YIPEDSPGRPGVLRTVESITIHETANTSEGA-------------DAEAHSDYLSTTSDEV 111 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H + D +I Q++P ++ AWH+G N SIGIEL + D + Sbjct: 112 SWHYTVD-DHQIYQHLPDNEEAWHSGD------REGNHSSIGIELCVNADGNF-DQTMEN 163 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP------GPAFDWARFRVLVSK 180 A +T L+ Y ++ H D + K P G W F +V + Sbjct: 164 AAKLTAFLLKEYDLTIDDVKQHYDF--NGKDCPLIIRQEGR---WDEFLGMVQQ 212 >UniRef50_A3DIC1 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium thermocellum ATCC 27405 RepID=A3DIC1_CLOTH Length = 218 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 59/170 (34%), Gaps = 29/170 (17%) Query: 19 YDCRPD-DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 Y+ RP TP + +H+ P A T ++ S H + Sbjct: 15 YNRRPGYSMTPEYITIHSTGNPTSTARNE--RAWLTNP-----------NNNVTASWHIV 61 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVT 137 + E ++ +P ++ AWHAG G N SIGIE+ + Q A + Sbjct: 62 VDE-KEAIEAIPLNEVAWHAGDG---GNGTGNRKSIGIEICESGDR---QKTLQNAAELV 114 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD------WARFRVLVSKE 181 L+ + H D + K P D W +F+ V KE Sbjct: 115 AKLLKERGWGVDKLRRHYDWSG--KICPRIFHDNGKWTGWKQFKEAVQKE 162 >UniRef50_C7N6M2 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6M2_SLAHD Length = 268 Score = 105 bits (262), Expect = 7e-22, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 26/183 (14%) Query: 8 LVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 + S + R +VVH + + Sbjct: 3 YEINKHHGSYNIQPR-SASAVKYIVVHYTGSGTSAAPAAL------------NNCQYFSG 49 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKR-AWHAGVSQYQGRERCNDFSIGIELEGTDTLAYT 126 + SAH I D I +Y + WH G + + N SIGIE+ +T Sbjct: 50 GDRQASAHYFID-DETIYEYADPSRHLTWHVGDGRGK-YGITNTNSIGIEVCQDGDRPFT 107 Query: 127 DAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD--------WARFRVLV 178 +A+ ++L + R L+D Y A + H D + RK P W + Sbjct: 108 EAETKRLQWLVRRLMDEYGVPADRVVRHYDAS--RKLCPYYYTPGGSGGDAAWKALHRRI 165 Query: 179 SKE 181 + + Sbjct: 166 TAD 168 >UniRef50_C5T4Q5 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4Q5_ACIDE Length = 230 Score = 105 bits (262), Expect = 9e-22, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 66/192 (34%), Gaps = 32/192 (16%) Query: 1 MLLEQGWLVGARRVPSPHYDCRPDD--ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDP 58 ++L W G + R D +V+H + + Sbjct: 20 IILSDPWYPGVQSCWERCTTKRSVDPIYGIRAVVIHATAGTSSSGAISVMKR-------- 71 Query: 59 QAHPFFAEIAHLRVSAHCLIRRDGE------IVQYVPFDKRAWHAGVSQY-----QGRER 107 S H L+ + E + P AWH + G R Sbjct: 72 ---------RDDPASFHWLVPDEDEAQHGHLVWACAPEALAAWHVRNAASHPDVNGGAGR 122 Query: 108 CNDFSIGIELEGT-DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPG 166 N +S+GIE+ ++D Q + A + R YP K++ H + P R++DPG Sbjct: 123 VNHWSLGIEVVNAQKNDPFSDWQIEATARIVRYCWAKYP-NLKHVVSHAKLDPGRRSDPG 181 Query: 167 PAFDWARFRVLV 178 FDW RF+ LV Sbjct: 182 EHFDWLRFKSLV 193 >UniRef50_C3DAX2 N-acetylmuramoyl-L-alanine amidase n=10 Tax=Bacillales RepID=C3DAX2_BACTU Length = 323 Score = 104 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 55/160 (34%), Gaps = 26/160 (16%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P+ P + VHN + + + VS H + D Sbjct: 47 PNAMKPEFITVHNT----------------YNDASAENEISYMIGNNNAVSFHVAVD-DK 89 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAAVTRAL 140 E VQ +PFD+ AWHAG G N SIG+E+ + Y A+ A V L Sbjct: 90 EAVQGIPFDRNAWHAGD----GNGNGNRKSIGVEICYSLSGGDRYYKAE-DNAAIVIAQL 144 Query: 141 IDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 + + N+ H + K P D R + K Sbjct: 145 MKQFNIPISNVRTHKSWSG--KHCPHRMLDEGRLDQFIEK 182 >UniRef50_UPI0001AEF803 putative N-acetylmuramoyl-L-alanine amidase n=2 Tax=Streptomyces RepID=UPI0001AEF803 Length = 219 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 49/172 (28%), Gaps = 10/172 (5%) Query: 16 SPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 SP P+ +VVH+ + A + + H Sbjct: 52 SPRGTISRLSYRPSRIVVHHTVSAN---TSDFSRARAHAHAHWVQDLHMDDNGWVDTGYH 108 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQG--RERCNDFSIGIELEGTDTLA--YTDAQYQ 131 L+ R G I + + G G N+ SIGI EG AQ+ Sbjct: 109 FLVSRGGWITEGRHGSLQTLTGGTGFVLGSHTSGQNEQSIGIACEGAYHAGATPPQAQWD 168 Query: 132 QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-WARFRVLVSKET 182 L + + Y + GH D PG D R R V+ Sbjct: 169 VLVVLCAYVCARYGIPPTRLYGHKDY--GDTLCPGVYHDRLPRLRDEVAARM 218 >UniRef50_A3ICX8 XlyB n=3 Tax=Bacillaceae RepID=A3ICX8_9BACI Length = 236 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 30/180 (16%) Query: 13 RVPSPHYDCR-PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 +PS Y + P P + VHN + + + + Sbjct: 9 FLPSSKYPIKAPYTMVPQYITVHNTA----------------NDAPAVNEISYMIGNNNQ 52 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRER----CNDFSIGIELEGTDTLA--Y 125 VS H + D E++Q +PF++ AWH G N SIG+E+ + + Y Sbjct: 53 VSYHVSVD-DKEVIQAIPFNRNAWHCGDGGGNSDPNALKKGNRISIGVEICYSKSGGVRY 111 Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF---DWARFRVLVSKET 182 A+ + L+ Y + H D + K P W F + K Sbjct: 112 GVAE-ENAVQYIAKLLKQYGWGIDRVKKHQDW--NGKYCPHRILSEDRWGSFLNRIKKAM 168 >UniRef50_UPI00017F5867 N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=Clostridium difficile ATCC 43255 RepID=UPI00017F5867 Length = 252 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 50/163 (30%), Gaps = 23/163 (14%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P+ +V+H D + H +L S H + D Sbjct: 15 PNKNNAKFIVIHETDNEDKGA-------------DAKRHAQALNNGNLEASVHYYVD-DK 60 Query: 83 EIVQYVPFDKRAWHAGVSQYQG--RERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRAL 140 I Q + + AW G S N SI IE+ YT A + +TR L Sbjct: 61 VIYQTLDYKDGAWAVGKSYGTALVAGVTNYNSINIEICVNKDGNYTKA-RENAIDLTRKL 119 Query: 141 IDCYPDIAKNMTGHCDIAPDRKTDPGPAFD----WARFRVLVS 179 + A + H D +K P D W F+ V Sbjct: 120 MKDLNISADKVIRHYD--AKKKYCPRKMLDNPKLWVDFKDKVK 160 >UniRef50_A9VVT9 N-acetylmuramoyl-L-alanine amidase n=50 Tax=root RepID=A9VVT9_BACWK Length = 311 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 50/162 (30%), Gaps = 29/162 (17%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P P + VHN + + +VS H + D Sbjct: 18 PYTMNPEFITVHNT----------------YNDATAENEVAYMIRNDNQVSFHIAVD-DK 60 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAAVTRAL 140 E VQ +P ++ AWH G G N SIG+E+ Y A+ A V L Sbjct: 61 EAVQGIPLERNAWHCGD----GGGNGNRKSIGVEICYSLNGGDRYYKAE-DNAAIVVAQL 115 Query: 141 IDCYPDIAKNMTGHCDIAPDRKTDPGPAF---DWARFRVLVS 179 + Y + H + K P W RF V Sbjct: 116 MKQYNIPINKVRTHQSW--NGKYCPHRMLAEGRWNRFIERVQ 155 >UniRef50_Q65KE6 N-acetylmuramoyl-L-alanine amidase n=3 Tax=root RepID=Q65KE6_BACLD Length = 311 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 33/166 (19%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P + HN + + + +VS H + D Sbjct: 20 PYSMDAKYITFHNTA----------------NDASAANEIAYMIRNNNQVSYHFAVD-DK 62 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAV----TR 138 E+VQ +P ++ AWH G G N SIG+E+ + + A+Y+ + Sbjct: 63 EVVQGIPTNRNAWHCGDENGPG----NRSSIGVEVCYSKSGG---AKYKAAEKLAIKFIA 115 Query: 139 ALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD---WARFRVLVSKE 181 L+ + H D + K P D W + ++ E Sbjct: 116 QLLTERGWGVDRVKKHQDWSG--KYCPHRVLDEGRWGAVKAAIAAE 159 >UniRef50_UPI0001793312 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793312 Length = 276 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 27/173 (15%) Query: 17 PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 H+ + + ++V+H + G + VS+H Sbjct: 26 NHFYHKNVNNKIKIIVLHFTGIDFGATVKEF--------------TSKRSNTSRNVSSHY 71 Query: 77 LIRRDGE------IVQYVPFDKRAWHAGVSQYQGRERCNDFS-------IGIELEGTDTL 123 +I R E ++Q VP + ++HAG+S + N S G Sbjct: 72 VIARPTEAGTHNQLLQVVPENYVSYHAGISLWGNYSSINSISIGIEIVNYGYNATNDSWD 131 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRV 176 + Q + + +++ Y + N+ GH DIAP+RK DPG F W++ Sbjct: 132 PFYQDQISIVGLMVARMVNQYKVLPHNVVGHSDIAPNRKIDPGVMFPWSQLYK 184 >UniRef50_Q9ZX49 Gp29 n=1 Tax=Mycobacterium phage TM4 RepID=Q9ZX49_BPMT4 Length = 547 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 55/153 (35%), Gaps = 14/153 (9%) Query: 41 GEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVS 100 G+ G W D A L + + + R+G + AWHAGV Sbjct: 215 GDMGRLWGVVCHHTGSDNTPSSEIAFHPSLGLCSQIHLARNGTVTLC--GVGIAWHAGVG 272 Query: 101 QYQG--RERCNDFSIGIELEGTDTLA-------YTDAQYQQLAAVTRALIDCYPDIAKNM 151 Y G + N +IGIE + + T + DAQY A+ A ++ Sbjct: 273 SYPGLPEDNANAVTIGIEAQNSGTYDGAPHRTNWPDAQYDAYVKCCAAICRRLGVRADHV 332 Query: 152 TGHCDIAP--DRKTDPGPAFDWARFRVLVSKET 182 H + A K DPG A D FR V + Sbjct: 333 ISHKEWAGRKQGKWDPG-AIDMNIFRADVQRRI 364 >UniRef50_C7UBT6 Sporulation domain-containing protein n=3 Tax=Bacilli RepID=C7UBT6_ENTFA Length = 306 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 52/168 (30%), Gaps = 34/168 (20%) Query: 17 PHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHC 76 PHY +V+H+++ + SAH Sbjct: 16 PHYSSGRSGAKVNKIVIHHMAGTNYDIVPSIWQ-------------------TREASAHY 56 Query: 77 LIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA---YTDAQYQQL 133 I ++GEI YV + AWHAG N SIGIE ++ A Sbjct: 57 GIGKNGEIRAYVDENNTAWHAGNW------NANISSIGIENCNSNGSPSWSVNQATIDAC 110 Query: 134 AAVTRALIDCYPDIA----KNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 A + + + +N+ H + + PG D ++ Sbjct: 111 AKLVADIAKRHGLGKLVVNQNLFPHSYFSST--SCPGVLLDKLQYIAD 156 >UniRef50_A9B3J4 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3J4_HERA2 Length = 426 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 62/161 (38%), Gaps = 28/161 (17%) Query: 16 SPHYDCRPDDE-TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 +P+ R P +++H + G+++ P +R S Sbjct: 11 TPNKTARNTTSFKPEFVILHETAG--------------YGSLEWNLRP------EVRSSY 50 Query: 75 HCLIRRDGEIVQYVPF-DKRAWHAGVSQYQ---GRERCNDFSIGIELEG-TDTLAYTDAQ 129 + LI RDG+ YV AWHAGV + N ++IG+E+EG D T AQ Sbjct: 51 NYLIARDGKTYHYVNEKSYIAWHAGVRSWARGYSGGEINVYAIGVEVEGPNDGTPITTAQ 110 Query: 130 YQQLAAVTRALIDCY--PDIAKNMTGHCDIAPDRKTDPGPA 168 + L + R D Y P H +AP K DP Sbjct: 111 TKALVELIRYFRDTYAIPINRDYFFAHSTVAPGYKDDPRGY 151 >UniRef50_C5RQQ9 N-acetylmuramoyl-L-alanine amidase family 2 n=3 Tax=Clostridium cellulovorans 743B RepID=C5RQQ9_CLOCL Length = 304 Score = 103 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 52/166 (31%), Gaps = 26/166 (15%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 +++ + +V H + + + SAH Sbjct: 10 NFNY-SEGNNIKFIVCHFTGNDN---------------DTAKNNADYFGSCDREASAHYF 53 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVT 137 + + EI Q V +WH G N SI IE+ G ++ + + Sbjct: 54 VDNN-EIRQVVEEYNASWHCGDGN-GAYGITNYNSISIEMCG-ANGDISETTAKNARNLI 110 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDPGP-----AFDWARFRVLV 178 R L+ Y +N+ H D + RK P P W F+ + Sbjct: 111 RLLMKKYGVQIENVVRHYDAS--RKNCPSPFSSNNWARWTEFKNKI 154 >UniRef50_A4TAY9 Peptidoglycan-binding domain 1 protein n=5 Tax=root RepID=A4TAY9_MYCGI Length = 288 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 53/184 (28%), Gaps = 30/184 (16%) Query: 10 GARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 P D + ++VH+ Q H Sbjct: 24 DVVEFPGWRNRGHGDFKDIRGVMVHHTGSDTASAESIARGRPDLAGPLSQLH-------- 75 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQ--YQGRERCNDFSIGIELEGTDTLA--- 124 I RDG + V AWHAGV + N +IGIE + T Sbjct: 76 --------IARDGTVT--VVAAGVAWHAGVGMYPWLPANMGNWHTIGIECANSGTSPTAP 125 Query: 125 ----YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP--DRKTDPGPAFDWARFRVLV 178 + DAQY L A+ A GH + A K DPG D R R V Sbjct: 126 HRRNWPDAQYAALIGCCAAICRRLGVPATRTIGHKEYAGRAQGKWDPG-GIDMDRLRRDV 184 Query: 179 SKET 182 + Sbjct: 185 AARI 188 >UniRef50_B3QCK8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3QCK8_RHOPT Length = 464 Score = 102 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 64/204 (31%), Gaps = 62/204 (30%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P ++V+H+ + G SAH +I RDG Sbjct: 26 GGPIVPKVIVLHDTAGHLHGRDSIVWLRGGPGQSQNS-------------SAHVVIGRDG 72 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD--------------------- 121 I Q F+ + WHAG+S ++GR N +++GIE+ Sbjct: 73 TITQLAAFNVKTWHAGISNWRGRANLNGWAVGIEIVNPGGPLRTLGNGRYQGIDLIDTKA 132 Query: 122 ---------------------------TLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGH 154 L ++ Q + + RAL+ YP + H Sbjct: 133 DPSLKVRPGVFPPLTPDGKAVPRTAGYWLEHSPEQIDAVVELCRALVAAYP-TITEIVTH 191 Query: 155 CDIAPDRKTDPGPAFDWARFRVLV 178 IAP RK D P F R V Sbjct: 192 WMIAPTRKVDTNPLFPIDEVRRRV 215 >UniRef50_C4V1H2 Putative uncharacterized protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1H2_9FIRM Length = 219 Score = 102 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 63/187 (33%), Gaps = 39/187 (20%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 R + HY D P +VVH + E A A+ + Sbjct: 48 REYAALHYGMPMDTIIPQAVVVHWTAGDTWESAYWHFYAAA------------AQDGTMN 95 Query: 72 VSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQ 129 +AH L+ RDG I + +P A H N SIGIE G T+ Q Sbjct: 96 YAAHFLVDRDGTIFRLLPETAMARH--------IIGYNWCSIGIENVGGVGGVEDLTEEQ 147 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHC-------------DIAPDR--KTDPGPAFDWARF 174 AA+ R L YP + GH +A R K+DPGP F Sbjct: 148 LAANAALIRYLHAKYP-TIAYVFGHYQQDTARDSGLYIEHVAGYRSIKSDPGPQF-MGAL 205 Query: 175 RVLVSKE 181 R + + Sbjct: 206 RRCLEGD 212 >UniRef50_D2RJL3 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJL3_ACIFE Length = 242 Score = 101 bits (253), Expect = 8e-21, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 61/183 (33%), Gaps = 36/183 (19%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 HY + P +VVH + + F +P L V++H L Sbjct: 76 HYGREMETIVPQAVVVHWTASDS----RDGVYRYFYNEENPH-----LRNGTLNVASHFL 126 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAA 135 + RDG I Q P HA N +IGIE G T AQ + Sbjct: 127 VDRDGTIWQLTPETALNRHA--------IGLNWCAIGIENVGGVDGREDLTRAQLEANVN 178 Query: 136 VTRALIDCYPDIAKNMTGHCDIAPDR---------------KTDPGPAFDWARFRVLVSK 180 + R L YP + + GH R KTDPGP F A + ++ Sbjct: 179 LIRYLRGKYP-TIQWVLGHYQQDQARHTSLWKENVPGYYHGKTDPGPRF-MAGLKEQLAG 236 Query: 181 ETT 183 E Sbjct: 237 EGV 239 >UniRef50_Q3AXW0 N-acetylmuramoyl-L-alanine amidase, family 2 n=13 Tax=Chroococcales RepID=Q3AXW0_SYNS9 Length = 308 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 33/177 (18%) Query: 22 RPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRD 81 R D +P ++V+H + I +VS H LI RD Sbjct: 140 RRLDGSPRVIVLHET-VYSVSSAVNTFQTPHP-------------IDEDQVSYHTLISRD 185 Query: 82 GEIVQYVPFDKRAWHAGVSQYQG---------RERCNDFSIGIELEGT--------DTLA 124 G ++ V RA+ AG S + G + N+F++ + LE Sbjct: 186 GRVLDLVDPLMRAYGAGYSAFLGEWAITNKRLKGSVNNFALHLSLETPSNGANGRSGHSG 245 Query: 125 YTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIA-PDRKTDPGPAFDWARFRVLVSK 180 Y+ QY LA V +D + ++T H + + DP +FDW+ +V ++ Sbjct: 246 YSSEQYDALALVLAGWMDAFNLPPTSVTTHRHVDIGGERADP-RSFDWSALQVRLAA 301 >UniRef50_B8HV25 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV25_CYAP4 Length = 274 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 74/201 (36%), Gaps = 51/201 (25%) Query: 9 VGARRVPSPHYDCR--------PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60 V +Y R P TL+V+H + G I A T D A Sbjct: 89 QENAWVDPSNYGERLTQDAFGHPISSRVTLVVLHETVI----SGRAAIAAFQTNRPDDLA 144 Query: 61 HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRER------------- 107 + S H LI R+G +V VP +KRA+ AG S + G Sbjct: 145 ----------QASYHDLILRNGTVVHLVPLEKRAFGAGNSVFYGANGPETVQTNPKLPSS 194 Query: 108 CNDFSIGIEL--------EGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIA- 158 N+FS I L E YT A+YQ LA + +A + +T H + Sbjct: 195 VNNFSYHISLESPADGNNENATHSGYTAAEYQSLAWLIKAA----GIPSNRITTHYAVDR 250 Query: 159 -PDRKTDPGPAFDWARFRVLV 178 RK DP +FD+ + L+ Sbjct: 251 TGTRK-DP-RSFDYTKLFELL 269 >UniRef50_A0RH25 N-acetylmuramoyl-L-alanine amidase n=77 Tax=Bacillus RepID=A0RH25_BACAH Length = 160 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 23/155 (14%) Query: 26 ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIV 85 E L++H+ S + + + I DG +V Sbjct: 26 EKVNKLIIHHTSEDGWDVYKTH-------------EFHQKVRGWSGIGYNYFIEEDGTVV 72 Query: 86 QYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT-DTLAYTDAQYQQLAAVTRALIDCY 144 + HA + N +IGI + G D T AQ L ++ + + + Sbjct: 73 EGRGL-HIGAHA--------KDNNRHTIGICMTGNFDKYDPTIAQMNALYSLCKMFMKQF 123 Query: 145 PDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVS 179 +N+ GH ++ K+ PG F R ++S Sbjct: 124 AIKKENILGHRELEGVTKSCPGKRFSMVELRNVLS 158 >UniRef50_C6JDZ2 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDZ2_9FIRM Length = 253 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 62/165 (37%), Gaps = 25/165 (15%) Query: 24 DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH-LRVSAHCLIRRDG 82 + P +V+HN ++ D +AH + SAH + D Sbjct: 15 SGQIPRYIVIHNT-------------DNYSTGADARAHAMAQYHGNFDGYSAHVYVD-DK 60 Query: 83 EIVQYVPFDKRAWHAGVSQYQGR---ERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRA 139 Q +P+ + AWH GV Y GR N S+GIE+ Y A + A V R Sbjct: 61 SAYQAMPYSRGAWHVGV-NYGGRLFGTVNNRNSVGIEMCVQAGFDYDKA-FANTAEVCRQ 118 Query: 140 LIDCYPDIAKNMTGHCDIAPDRKTDP---GPAFDWARFRVLVSKE 181 L+ A + H D+ K P DW RF+ L+ + Sbjct: 119 LMSELNIPADRVVQHYDVCA--KNCPSAIRAKNDWNRFKKLIQGK 161 >UniRef50_A7GH75 Prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clostridium botulinum RepID=A7GH75_CLOBL Length = 176 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 29/170 (17%) Query: 17 PHYDCRP--DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 P+ R P ++++H+ H + Sbjct: 6 PNLKFRGLSYGNNPKMIILHHAEASDCS--------------IQDIHSWHLNNGWSGCGY 51 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQL 133 + I++DG I + P + H N SIG+ +EG + + QY L Sbjct: 52 NYFIKKDGSIYKGRPDNAIGAHC--------LSYNSVSIGVCMEGRFNVEVMGETQYNSL 103 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT 183 + R L + Y + H ++ + PG F ++ + T+ Sbjct: 104 KELIRYLQNKYNI--NKIYAHREL--NETDCPGKNFPLSKIKNECLGGTS 149 >UniRef50_B9YE42 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YE42_9FIRM Length = 244 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 53/173 (30%), Gaps = 21/173 (12%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 +P H + +V+H + + Sbjct: 88 YIPEGHQNRPGIQREIRWIVIHETDNEAASADA------------WHHNEYLKTNETDIN 135 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H + D I +P ++ WHAG N IGIEL + + + + Sbjct: 136 SWHYTVD-DHAIYHSLPDEEVGWHAGDKM--TENGGNMTGIGIELCVNEGNDF-EKTMEN 191 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR---FRVLVSKET 182 AA+ L+ Y +++ H D + K P R F +V + T Sbjct: 192 AAALCAELMKAYDLRIEDIKQHHDFSG--KDCPHRILSADRTEEFVKMVQEAT 242 >UniRef50_Q5L2J6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Geobacillus kaustophilus RepID=Q5L2J6_GEOKA Length = 226 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 59/177 (33%), Gaps = 25/177 (14%) Query: 18 HYDCRPDDET--PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 + RP + LV+H + P + T A SAH Sbjct: 12 NKYSRPGLKLKGVKKLVLHWTANPGASAANHFTYFDRT-----------IIQAQRYASAH 60 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGVSQYQGRE----RCNDFSIGIELEGTDTLAYTDAQYQ 131 + ++ E + +P D+ A+HA Y+G N SIG+E+ + Sbjct: 61 IFVDKN-EAINIIPLDEVAYHANDGTYRGVPELKPNANFLSIGVEMCVEKDGTFHPDTIS 119 Query: 132 QLAAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAFD----WARFRVLVSKETT 183 + V L + K++ H DI K P P + F+ V + + Sbjct: 120 RTEDVFVELCKTFKLDPIKDIVRHYDI--THKNCPAPWVKDSKAFEDFKQRVKAKMS 174 >UniRef50_A7VT90 Putative uncharacterized protein n=2 Tax=Clostridium leptum DSM 753 RepID=A7VT90_9CLOT Length = 316 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 59/162 (36%), Gaps = 28/162 (17%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P TPT +VVHN + + VS H + D Sbjct: 18 PYAMTPTRVVVHNTA----------------NDAPAANEIAYMIRNDNEVSFHYAVD-DQ 60 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAAVTRAL 140 E+VQ VP ++ W+AG +G N I +E+ + +T A+ Q A ++ Sbjct: 61 EVVQGVPENRNTWNAGDGNGKG----NREGIAVEICYSLSGGEKFTKAE-QNAAEFIASI 115 Query: 141 IDCYPDIAKNMTGHCDIAPDRKTDPGPAFD--WARFRVLVSK 180 + Y +T H D + K P D W RF +V Sbjct: 116 LKRYGWGMDKVTKHQDY--NGKYCPHRTLDLGWDRFLKMVEA 155 >UniRef50_A6CD01 Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CD01_9PLAN Length = 221 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 55/161 (34%), Gaps = 24/161 (14%) Query: 26 ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR-----R 80 +V+H+ + G I L + D + L + H +I Sbjct: 52 RDWEYIVIHHTASSTGSVES--IHELHSKKKDKS------GNSWLGIGYHFVIGNGNGMP 103 Query: 81 DGEIVQYVPFDK--RAWHAGVSQYQGRERCNDFSIGIELEGT-DTLAYTDAQYQQLAAVT 137 DG I + + HAG ++Y N IGI L G + ++AQ + + Sbjct: 104 DGAIESTFRWREQMHGAHAGNNKY------NQHGIGICLVGNFENEPPSEAQLAAVKKLV 157 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 L Y + ++ GH D+ PG F + + Sbjct: 158 GVLKAEYNINSDHVQGHRDVKAT--ACPGKYFPMSEVASAI 196 >UniRef50_B8R884 Gp19 n=3 Tax=root RepID=B8R884_9CAUD Length = 269 Score = 99 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 23/148 (15%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P+ TPT + +HN S H ++ D Sbjct: 24 PNPMTPTEITLHNT----------------YNDAPAINERNNVANNSQGTSFHVVVD-DK 66 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQ-YQQLAAVTRALI 141 E +Q +PF++ AWHAG G R N SIG+E+ + + Q + V R L+ Sbjct: 67 EAIQLIPFNRNAWHAGDG---GSGRGNRHSIGVEICYSKSGGPRYEQAVRNAIIVIRQLM 123 Query: 142 DCYPDIAKNMTGHCDIAPDRKTDPGPAF 169 D + + H + + K P Sbjct: 124 DQFNIPIDRVKTHQE--RNGKYCPHRML 149 >UniRef50_C1IB98 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IB98_9CLOT Length = 184 Score = 99 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 32/159 (20%) Query: 18 HYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 ++D P+++V H+ + + + H Sbjct: 34 NFD-----FNPSIIVYHHTA--------------DNNMTPQKIDEIHKGRGWSGIGYHFY 74 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT-DTLAYTDAQYQQLAAV 136 IR+DG I + P + HA N + GI +EG ++ T +Q + + Sbjct: 75 IRKDGMIYRGRPENSVGAHA--------PGVNSRAFGIAVEGNLNSENLTQSQMSSIIEL 126 Query: 137 TRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 ++ L++ Y K++ H D+ PG F + + Sbjct: 127 SKYLMEKYNI--KDLKRHKDVRNTE--CPGKNFPFEEIK 161 >UniRef50_B8FLA2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FLA2_DESAA Length = 166 Score = 99.6 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 52/178 (29%), Gaps = 40/178 (22%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI---- 78 P +V+H ++ IDA+ + H +I Sbjct: 1 MAGLKPEYIVIHTAAIDDPNCDAAHIDAVHRNDNGWDC-----------IGYHFVILDDR 49 Query: 79 ---RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTD-TLAYTDAQYQQLA 134 + DG++ + + H ND SIGI G +T+ Q + L Sbjct: 50 HPQKNDGDLEKGRDINMPGAHV--------LGLNDRSIGICCVGHGDHAPFTEKQMETLC 101 Query: 135 AVTRALIDCY-PDIAKNMTGHCDIA------------PDRKTDPGPAFDWARFRVLVS 179 L+D Y + GH +I KT PG D R + Sbjct: 102 RTVSELMDAYGGIPLNRVIGHREINLLVAEGVLAAKYGTEKTCPGKMVDMDVIRQAIQ 159 >UniRef50_A0YR44 AmpD n=3 Tax=Oscillatoriales RepID=A0YR44_9CYAN Length = 301 Score = 99.6 bits (247), Expect = 5e-20, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 69/189 (36%), Gaps = 46/189 (24%) Query: 18 HYDCR--------PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAH 69 +Y R P TP ++V+H + + + T D Sbjct: 115 NYGQRYLYDVSGKPVTNTP-IVVLHETA-ATAQSTINFFQTYHTDEDD------------ 160 Query: 70 LRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR---------ERCNDFSIGIELE-- 118 + S H LI +G++V VP D RA+ AG S +QG N+F+ + LE Sbjct: 161 -QASYHTLITLNGDVVYIVPPDLRAYGAGNSVFQGEAVQTDAKFPPSVNNFAYHVSLETP 219 Query: 119 ------GTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAP-DRKTDPGPAFDW 171 G YT AQYQ LA + +T H + ++DP FD Sbjct: 220 PDGLRNGASHSGYTTAQYQSLAWLVA----QTGIPENRITTHQAVDRSGERSDPRR-FDQ 274 Query: 172 ARFRVLVSK 180 F L+ + Sbjct: 275 QLFLQLLRR 283 >UniRef50_UPI0001B554B9 secreted amidase n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B554B9 Length = 639 Score = 99.2 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 58/176 (32%), Gaps = 37/176 (21%) Query: 20 DCRP-DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 RP + +V+H AH L+ Sbjct: 260 SDRPANGIAIDRIVLHTAEGSFASAKQSL------------------SAPGAVSGAHYLM 301 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT---DTLAYTDAQYQQLAA 135 DG Q + A+ G Y N S+ IE G YTDA YQ+ A Sbjct: 302 DTDGTTTQLMANKDLAFAVGNYHY------NLHSVSIEQAGFTARGADWYTDAVYQRTAE 355 Query: 136 VTRALIDCY--PDIAKNMTGHCDIAPD-------RKTDPGPAFDWARFRVLVSKET 182 + + L + Y P +++ GH ++ + D G A+DW RF L+ T Sbjct: 356 LVKYLAERYDVPLDRQHVLGHDNVPGSLDSNLAAQHWDKGTAWDWNRFMRLLGAPT 411 >UniRef50_C9A1B6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A1B6_ENTGA Length = 316 Score = 98.8 bits (245), Expect = 8e-20, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 60/178 (33%), Gaps = 33/178 (18%) Query: 21 CRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR 80 R + L++H + G +F + + SAH + Sbjct: 20 PRIKNFRIEGLIMHYTANNGGTAR--------------NHKSYFNNLNGVYASAHLFVD- 64 Query: 81 DGEIVQYVPFDKRAWHA--------GVSQYQGR---ERCNDFSIGIELEGTDTLAYTDAQ 129 D E + +P ++ A+HA G Y R N +IGIE+ T+ Sbjct: 65 DEEAICIIPLNEVAYHANDIQKYVNGQPYYPLRSIIGNANYSTIGIEMCLDRNGKITEKT 124 Query: 130 YQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAF----DWARFRVLVSKET 182 +Q + LI YP + H D+ K P P + RF+ V +T Sbjct: 125 FQNTVKAVKELIAKYPNITRDKIWRHYDV--TSKNCPAPWVAKPSELERFKDAVFGKT 180 >UniRef50_A7G716 N-acetylmuramoyl-L-alanine amidase n=7 Tax=Clostridium RepID=A7G716_CLOBH Length = 236 Score = 98.8 bits (245), Expect = 8e-20, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 29/164 (17%) Query: 17 PHYDCRP--DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 P+ R P ++++H+ E G I + ++ Sbjct: 6 PNLKFRGLSYGNNPKMIILHH-----AEASGCSIKDIHLWHLN---------NGWSGCGY 51 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT-LAYTDAQYQQL 133 + I++DG I + P + H N SIGI +EG QY L Sbjct: 52 NYFIKKDGAIYKGRPDNAIGAHC--------LSYNGVSIGICMEGRFNVEEMGADQYNSL 103 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 +T L + Y + GH ++ + PG F R + Sbjct: 104 KDLTCYLQNKYNI--NKIYGHREL--NETECPGNNFPLHRIKKE 143 >UniRef50_C1FV42 Prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase n=8 Tax=Clostridium RepID=C1FV42_CLOBJ Length = 151 Score = 98.4 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 52/164 (31%), Gaps = 29/164 (17%) Query: 17 PHYDCRP--DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSA 74 P+ R P ++++H+ H + Sbjct: 6 PNLKFRGLSYGNNPKMIILHHAEASDCS--------------IQDIHSWHLNNGWSGCGY 51 Query: 75 HCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT-LAYTDAQYQQL 133 + I++DG I + P + H N SIGI EG +AQY L Sbjct: 52 NYFIKKDGSIYKGRPGNAIGAHC--------LSYNSVSIGICTEGRFNIERMGEAQYNSL 103 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVL 177 +TR L + Y + H ++ + PG F ++ + Sbjct: 104 KELTRYLQNKYNI--NKIYAHSEL--NETDCPGKNFPLSKIKKE 143 >UniRef50_A5Z605 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z605_9FIRM Length = 212 Score = 98.4 bits (244), Expect = 9e-20, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 32/159 (20%) Query: 27 TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ 86 + +VVH + P + + F VS+H ++ GEI+Q Sbjct: 73 SVKDIVVHYVGNPGSTA---------------EQNRNFYAGDQSNVSSHFVVGLKGEIIQ 117 Query: 87 YVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLAAVTRALIDCYP 145 +P + + S ++ N+ +I IE+ D + Y+ L + L + Sbjct: 118 CIPLSEMSA---ASNWR-----NNDTISIEVCHPDDTGKFNKKTYKSLVKLVAWLEEQCG 169 Query: 146 DIAKNMTGHCDIAPDRKTDPGPAF-----DWARFRVLVS 179 ++ H DI K P F W +F+ V+ Sbjct: 170 LEDGDVIRHYDITG--KECP-RYFVTHEDAWKKFKQDVA 205 >UniRef50_A0LPT1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPT1_SYNFM Length = 288 Score = 98.0 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 52/166 (31%), Gaps = 28/166 (16%) Query: 25 DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRR---- 80 + +++H+ + G ID + H LI Sbjct: 138 NSQWKYIIIHHTATDIGNA--SLIDRTHEDRGFW-----------YGLGYHFLIDNGTLG 184 Query: 81 --DGEIVQYVPF--DKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLAA 135 DG+I + + H ND IGI L G + +Q + L Sbjct: 185 KGDGQIEASPRWVKQQCGAHCKAG------GMNDKGIGIALVGNFNEEQPSSSQLRSLDY 238 Query: 136 VTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 + + L+D Y A + GH D+ PG F W R +S Sbjct: 239 LLKTLMDYYRIPAGRVVGHRDVDGAATDCPGRRFPWQTVRRSLSAS 284 >UniRef50_C0QM08 Putative N-acetylmuramoyl-L-alanine amidase AmpD n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM08_DESAH Length = 439 Score = 97.6 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 3/100 (3%) Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQL 133 A+ +I R+G Q + R+ HAG+S + G+ + S+GIEL G T AQY+ + Sbjct: 100 ANYVIARNGVTYQIMDKQFRSDHAGLSMWNGQNDISSVSLGIELVGHHYAPLTSAQYRSV 159 Query: 134 AAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR 173 A + L Y K + H +A R P P F+ Sbjct: 160 AMLIDMLQKAYGLDDKAVLTHSQVAYGR---PNPWFNENH 196 >UniRef50_O34391 N-acetylmuramoyl-L-alanine amidase xlyB n=3 Tax=Bacillus subtilis group RepID=XLYB_BACSU Length = 317 Score = 97.6 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 26/163 (15%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P+ + + +HN + + S H + D Sbjct: 20 PNAMSAEYITIHNTA----------------NDASAANEISYMIGNTSSTSFHFAVD-DQ 62 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLA-AVTRALI 141 E++Q +P ++ AWH G N SIG+E+ + + + LA + L+ Sbjct: 63 EVIQGLPLNRNAWHTGDGT---NGPGNRKSIGVEICYSKSGGPKYEAAEALAISFVAQLL 119 Query: 142 DCYPDIAKNMTGHCDIAPDRKTDPGPAF---DWARFRVLVSKE 181 + H D + K P W + + + KE Sbjct: 120 KERGWGIDRVRKHQDWSG--KYCPHRILSEGRWDQVKAAIEKE 160 >UniRef50_B4ALM5 N-acetylmuramoyl-L-alanine amidase CwlA (Cellwall hydrolase) (Autolysin) n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4ALM5_BACPU Length = 273 Score = 97.3 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 57/174 (32%), Gaps = 29/174 (16%) Query: 14 VPSPHYDCR-PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 VPS Y + P+ + +HN + ++ + Sbjct: 10 VPSIRYGLKCPNKMDAEYITIHNTANDAA----------------AKSEISYMINNTSST 53 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQY 130 S H + D E++Q +P D+ AWH+G N SI IE+ + Y A+ Sbjct: 54 SYHFAVD-DKEVIQAIPLDRNAWHSGDGT---NGTGNRKSIAIEICYSQSGGTRYKTAEK 109 Query: 131 QQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF---DWARFRVLVSKE 181 L+ + H D + K P W+ F+ + KE Sbjct: 110 LA-IQFVAQLLKERSWGVDRVRKHQDW--NGKYCPHRILSEGRWSSFKAAIEKE 160 >UniRef50_P14892 N-acetylmuramoyl-L-alanine amidase cwlA n=7 Tax=root RepID=CWLA_BACSP Length = 251 Score = 97.3 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 48/153 (31%), Gaps = 25/153 (16%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P + PT + HN S H + D Sbjct: 18 PYEMNPTEITFHNT----------------YNDAPAINERNNVANNSTGTSFHIAVD-DK 60 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAAVTRAL 140 E +Q +PF++ AWHAG R N SIG+E+ + Y A+ V L Sbjct: 61 EAIQLIPFNRNAWHAGDGT---NGRGNRHSIGVEICYSQSGGARYRKAELNA-VEVIAQL 116 Query: 141 IDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWAR 173 + + + H + + K P D R Sbjct: 117 MIQFDIPISKVKTHQE--RNGKYCPHRMLDEGR 147 >UniRef50_C1I5Y6 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I5Y6_9CLOT Length = 210 Score = 97.3 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 27/155 (17%) Query: 25 DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEI 84 P ++ H+ + + + + + H IR+DG I Sbjct: 71 TNNPNKIIYHHSARGEWS--------------PEEINEYHKSKGWKGIGYHYYIRKDGSI 116 Query: 85 VQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY-TDAQYQQLAAVTRALIDC 143 P + H + N+ SIGI LEG Y T+ Q + L ++ Sbjct: 117 YSGRPENAEGAH--------TKGENNSSIGICLEGNFEDEYPTEEQLESLYKLSLYTSLK 168 Query: 144 YPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLV 178 Y + GH D+ + PG F R V Sbjct: 169 YDI--YKIIGHRDV--YKTLCPGENFPIEDIRDKV 199 >UniRef50_C0G0C8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Natrialba magadii ATCC 43099 RepID=C0G0C8_NATMA Length = 321 Score = 96.9 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 67/200 (33%), Gaps = 56/200 (28%) Query: 12 RRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLR 71 R V + ++ R D + +V+H + + Sbjct: 67 RWVEAANHSAR--DHSIDWIVIHVTAGAYQGALNTL------------------TSSDSG 106 Query: 72 VSAHCLIR--------RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTL 123 VS+H L++ G + Q V D+ AWHA R N SIGIE E D Sbjct: 107 VSSHYLVKNYDWTDGPEAGHVDQLVHHDRAAWHA-------RSIANHRSIGIEHEWFDDN 159 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIAK-------------NMTGHCDIAP--------DRK 162 +DA Y+ A + R + D + + + GH + + Sbjct: 160 GISDACYESSAELVRCIADMHDIPLEFYTSNTCIQNESGGIIGHTHVPDGDCSSFHHGGR 219 Query: 163 TDPGPAFDWARFRVLVSKET 182 T P P +D F LV +E Sbjct: 220 TCPYPDWDMDHFESLVKEED 239 >UniRef50_C0W9N9 Putative uncharacterized protein n=2 Tax=Veillonellaceae RepID=C0W9N9_9FIRM Length = 189 Score = 96.9 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 24/154 (15%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 + + +V+H+ P + + H + H +I Sbjct: 31 FGYLEPRDVTDQIVIHHTGNPTDDDLSAE-----------EIHESHKAQGWSGIGYHFVI 79 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT-LAYTDAQYQQLAAVT 137 R+DG I + P D HA N +IGI + G TDAQ + + + Sbjct: 80 RKDGTIERGRPMDTIGAHA--------YGENSHTIGIHVCGNFDIAEPTDAQIESCSVLV 131 Query: 138 RALIDCYP--DIAKNMTGHCDIAPDRKTDPGPAF 169 + L Y + GHCD+ PG Sbjct: 132 QWLALIYGLEINDATVVGHCDLMAT--ACPGENL 163 >UniRef50_D0LH65 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH65_HALO1 Length = 233 Score = 96.9 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 52/147 (35%), Gaps = 17/147 (11%) Query: 28 PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQY 87 P ++ H + PG + T + S H I +G I Q Sbjct: 85 PLAIMAHYTATDPGTARAMAERRVRERTSQ-----------NRPASWHITIDHEGTIWQM 133 Query: 88 VPFDKRAWHAGVSQYQGRER----CNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDC 143 V AWH + G N +GIELEG +T AQ + V RAL+ Sbjct: 134 VAASACAWHCARGKVDGPSGKKLSINQAVVGIELEGHG-EEFTAAQIEAACRVWRALVRT 192 Query: 144 YPDIAK-NMTGHCDIAPDRKTDPGPAF 169 Y M H P R+ DPGP + Sbjct: 193 YAIPDHLAMLEHSRYDPGRRVDPGPVW 219 >UniRef50_O31982 N-acetylmuramoyl-L-alanine amidase blyA n=7 Tax=root RepID=BLYA_BACSU Length = 367 Score = 96.5 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 37/185 (20%) Query: 18 HYDCRPDDET--PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAH 75 + RP + V+H + P H + A + SAH Sbjct: 12 NKYTRPGLKLQGVKKCVLHYTANPGAGA---------------DNHRRYFSNAQVYASAH 56 Query: 76 CLIRRDGEIVQYVPFDKRAWHAGV------------SQYQGRERCNDFSIGIELEGTDTL 123 + + E + +P ++ A+HA + N SIG+E+ Sbjct: 57 IFVDKA-EAICIIPLNEVAYHANDIQQRDSAGNPYRGVAALKPNANFLSIGVEMCLEKDG 115 Query: 124 AYTDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAFDWAR----FRVLV 178 ++ ++ V L + + ++ H DI K P P ++ F+ V Sbjct: 116 SFHSDTVERTEDVFVELCNKFGLDPIDDIVRHYDI--THKNCPAPWVSNSQKFVDFKNRV 173 Query: 179 SKETT 183 + + Sbjct: 174 KAKMS 178 >UniRef50_C7MM46 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MM46_CRYCD Length = 339 Score = 96.5 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 27/176 (15%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 S +Y P + VH S + ++ +A+ + S Sbjct: 9 AHSGNYT--PGGNRCEYIAVHYTS----------------NSAPARSEASYAQNSQHSSS 50 Query: 74 AHCLIRRDG-EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 H + DG E Q + AW G + N +I IE+ ++DA+ Q Sbjct: 51 YHYV--LDGYECYQLLNDTDTAWAVGTWPGYTQLISNRQAISIEVCNAGGS-FSDAERDQ 107 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDP-----GPAFDWARFRVLVSKETT 183 L + L++ + A ++ H D RK P + +W+ ++ T Sbjct: 108 LRELVALLMERHSIDADHVVRHWDCHTGRKECPEYYAGAKSNEWSELHDYITGGGT 163 >UniRef50_A9QTG2 Putative alanine amidase n=1 Tax=Bacillus phage bg2 RepID=A9QTG2_9VIRU Length = 311 Score = 96.5 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 51/160 (31%), Gaps = 26/160 (16%) Query: 23 PDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDG 82 P T + +HN + S H I D Sbjct: 20 PYAMTAEYITIHNT----------------YNDASANNEVQYMITNSNATSFHYAID-DF 62 Query: 83 EIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEG--TDTLAYTDAQYQQLAAVTRAL 140 E+VQ +P ++ AWH G G N SIG+E+ + Y AQ + L Sbjct: 63 EVVQGIPTNRNAWHCGD----GNGNGNRKSIGVEICYSMSGGDRYRKAQ-ALVIKFVAQL 117 Query: 141 IDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK 180 + + H D + K P D R++ +++ Sbjct: 118 LRERGWGIDRVKKHQDWSG--KYCPHRILDEGRWQSVLNA 155 >UniRef50_C7Q684 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=5 Tax=Actinomycetales RepID=C7Q684_CATAD Length = 375 Score = 96.1 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 58/172 (33%), Gaps = 17/172 (9%) Query: 20 DCRPDDETP-------TLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 D RP ++VH+ P + A + + + Sbjct: 57 DARPSSSPVLMLAGTTRKIIVHHTEFPNV---TDYSRAQAVHLAQEIQNLHMDKNGWIDT 113 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERC--NDFSIGIELEG-TDTLAYTDAQ 129 H + R G +++ A AG Q QG N IGIE EG T Q Sbjct: 114 GQHFTVSRGGYVLEGRHRSLEALTAGTKQVQGAHCIGENSQGIGIENEGTYYTETPPPVQ 173 Query: 130 YQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF--DWARFRVLVS 179 +Q L + + Y A ++ GH D + PG AF ++ R V+ Sbjct: 174 FQSLTKLCVDICRQYGIGAHDIFGHWDY--NETDCPGVAFYREFPTLRRAVA 223 >UniRef50_Q3ABL1 Prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABL1_CARHZ Length = 231 Score = 96.1 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 43/158 (27%), Gaps = 30/158 (18%) Query: 27 TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ 86 +V+H+ + + + H I + G I Sbjct: 97 NVDYIVLHHTAAT-------------RDLSWQEINSEHKARGFAGFGYHFYINKAGIIYA 143 Query: 87 YVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT-DTLAYTDAQYQQLAAVTRALIDCYP 145 P + HA ND SIGI G + T Q + L Y Sbjct: 144 GRPLNVIGAHA--------LGLNDESIGICFSGNFEEEKPTSEQINSGKLLVSWL--KYK 193 Query: 146 D-IAKNMTGHCDIA-----PDRKTDPGPAFDWARFRVL 177 + GH ++A + PG F F+ L Sbjct: 194 IFNKPKVIGHKEVASLRPTATKTACPGRNFPLDAFKSL 231 >UniRef50_Q609E7 N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q609E7_METCA Length = 617 Score = 96.1 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 28/176 (15%) Query: 14 VPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVS 73 P+ ++ P +V+H + P E S Sbjct: 8 CPATNFTQGRRGLKPLAVVIH--AYPSLETAETVF-----------------ANPRSSES 48 Query: 74 AHCLIRRDGEIVQYVPFDKRAWHAGV------SQYQGRERCNDFSIGIELEGTDTLAYTD 127 H LI G I QYV A+HAG+ Y+ N +IG+ ++ Sbjct: 49 CHYLIAAGGRIRQYVDETDTAYHAGLVINPSWGLYRRGINPNLMTIGVAAAVGPGEHWSG 108 Query: 128 AQYQQLAAVTRALIDCYPDIAK--NMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181 Y A + + + ++ H +I R G F+ A ++ Sbjct: 109 EMYDAAAELIGEIAAYWGFPPDAEHIVLHAEIRASR-DCTGRGFERAELLKRMASR 163 >UniRef50_B5LLI8 Gp242 n=8 Tax=unclassified Myoviridae RepID=B5LLI8_9CAUD Length = 476 Score = 95.7 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 55/153 (35%), Gaps = 14/153 (9%) Query: 41 GEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVS 100 G+FG W + A+ L +++ + R+GE AWHAG Sbjct: 204 GDFGEIWGVVAHHTGSFGETPKGIAQHPSLGLASQLYLGRNGEYTLC--GVGIAWHAGQG 261 Query: 101 QYQG--RERCNDFSIGIELEGTDT-------LAYTDAQYQQLAAVTRALIDCYPDIAKNM 151 Y G N +IGIE A++D QY A++ + + Sbjct: 262 SYPGLPTNDANRLTIGIEAANDGGGSPPGKRDAWSDVQYNAYVRGVAAILRKLGRDSSRV 321 Query: 152 TGHCDIAPD--RKTDPGPAFDWARFRVLVSKET 182 GH + A K DPG D FR V++ Sbjct: 322 IGHKEWAGTAQGKWDPG-GIDMNTFRADVARVM 353 >UniRef50_P81717 N-acetylmuramoyl-L-alanine amidase A n=1 Tax=Achromobacter lyticus RepID=CWHA_ACHLY Length = 177 Score = 95.3 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 30/153 (19%) Query: 51 LFTGTIDPQAHPFFAEIAHLRVSAHCLIRR-DGEIVQYVPFDKRAWHAGVSQYQGRERCN 109 + T + + +VSAH LIR+ DG+I Q V +AWHA + N Sbjct: 29 MHTMEGSYAGSISWFQNPSAQVSAHYLIRKSDGQITQMVREYHQAWHA--------KNHN 80 Query: 110 DFSIGIELEGT--DTLAYTDAQYQQLAAVTRALIDCYPD------------------IAK 149 ++IGIE +G D ++ A A +T+++ + Sbjct: 81 YYTIGIEHDGRAADAGNWSAAMVNASARLTKSICARRGVNCASAWKGPGYDTFHLVPDSV 140 Query: 150 NMTGHCDIAPD-RKTDPGPAFDWARFRVLVSKE 181 + GH ++ + + DPG F W+ + L++ Sbjct: 141 RVKGHGMLSGNENRYDPGKYFPWSNYYNLINGG 173 >UniRef50_C4V2A1 Possible N-acetylmuramoyl-L-alanine amidase n=3 Tax=Veillonellaceae RepID=C4V2A1_9FIRM Length = 280 Score = 95.3 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 46/155 (29%), Gaps = 26/155 (16%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 + + +VVH+I + + + H LI Sbjct: 49 FGPLENRFVTDCIVVHHIGNTNADVSAETVHEWHLH------------NGWSGIGYHFLI 96 Query: 79 RRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLA-YTDAQYQQLAAVT 137 R+DG I + P H N +IGI + G A T+AQ A + Sbjct: 97 RKDGTIEEGRPMGTVGAHV--------YGENRHTIGINIVGDFESAVPTEAQKHSAAHLI 148 Query: 138 RALIDCY---PDIAKNMTGHCDIAPDRKTDPGPAF 169 AL Y P + GH D PG Sbjct: 149 AALCIVYQLNPIWGVTVKGHRDFNAT--ACPGRYL 181 >UniRef50_D1XA05 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=4 Tax=Streptomyces RepID=D1XA05_9ACTO Length = 215 Score = 95.3 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 47/163 (28%), Gaps = 10/163 (6%) Query: 25 DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEI 84 + PT++VVH+ A E H L+ R G I Sbjct: 57 GKRPTMIVVHHTVSAN---TTDVSRAQAHAHAHWVQDLHMDENGWTDTGYHFLVSRGGWI 113 Query: 85 VQYVPFDKRAWHAGVSQYQG--RERCNDFSIGIELEGTDTLA--YTDAQYQQLAAVTRAL 140 + A +G G N IGI EG AQ++ L A+ Sbjct: 114 TEGRHQSLGALRSGRDFVLGAHTSGQNGAGIGIANEGAYHDGAQPPRAQWEVLVALCAYT 173 Query: 141 IDCYPDIAKNMTGHCDIAPDRKTDPGPAFD-WARFRVLVSKET 182 Y + GH D PG D + R V+ Sbjct: 174 CRQYGIAPSRIYGHKDF--GDTLCPGVLHDKLPQLRSEVAASM 214 >UniRef50_C0A8M7 Negative regulator of beta-lactamase expression-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A8M7_9BACT Length = 141 Score = 95.3 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 48/129 (37%), Gaps = 8/129 (6%) Query: 57 DPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIE 116 +VS H LI DG + V + AWHAG S + GR RCNDF +G+ Sbjct: 2 SWADTIAHMLRPESQVSYHVLIATDGVRARLVADEHIAWHAGASNFLGRTRCNDFLLGVS 61 Query: 117 LEGTDT-LAYTDAQYQ-QLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD--WA 172 G T+AQ L + MT H IAP RK D F W Sbjct: 62 FAGNTRLTPLTEAQIASALDWLAPRWFAR-GWTPAVMTDHRQIAPGRKDD---LFPAEWM 117 Query: 173 RFRVLVSKE 181 R + Sbjct: 118 RLLAAIRAR 126 >UniRef50_UPI0001693C62 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693C62 Length = 257 Score = 95.3 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 23/153 (15%) Query: 20 DCRPDDET--PTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCL 77 + RP + P LV H+ P +F + SAH Sbjct: 18 NTRPGSKLRGPVFLVAHDTGNPGSTAR--------------NNRNYFNTMTERSASAHVF 63 Query: 78 IRRDGEIVQYVPFDKRAWHAGVSQYQGRE----RCNDFSIGIELEGTDTLAYTDAQYQQL 133 I D EI++ +P +++AWH + ND ++G+EL + + A Y++ Sbjct: 64 ID-DTEILEIIPLNEKAWHVRYDVPTDKRLYGCSANDAAVGVELCYGGHIHFEKA-YRRY 121 Query: 134 AAVTRALIDCYPD-IAKNMTGHCDIAPDRKTDP 165 L + K++ H + P RK DP Sbjct: 122 VWYFAYLCRKFDLNPRKHIVSHKTLDPGRKVDP 154 >UniRef50_C1D367 Putative bifunctional protein, : N-acetylmuramoyl-L-alanine amidase; Muramoylpentapeptide carboxypeptidase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D367_DEIDV Length = 359 Score = 95.3 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 54/160 (33%), Gaps = 11/160 (6%) Query: 27 TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ 86 PT ++VH+ + A Q+H I + I R G +V+ Sbjct: 69 RPTRIIVHHTASANVTDYSQA-QAFTLARSIQQSHFDRGWIDSGQ---QFTISRGGYVVE 124 Query: 87 YVPFDKRAWHAGVSQYQGRE--RCNDFSIGIELEGTDTLAYTDA-QYQQLAAVTRALIDC 143 A G +G ND ++GIE EGT A QY L ++ L Sbjct: 125 GRHRSLEAAQGGTHHVRGAHCDGFNDVAVGIENEGTYMTVSPPAGQYSALVSLCAWLCQH 184 Query: 144 YPDIAKNMTGHCDIAPDRKTDPGPAF--DWARFRVLVSKE 181 Y A + GH D + PG + R V+ Sbjct: 185 YGIPATELYGHRDF--NTTACPGDLLYGQLPQLRRDVATR 222 >UniRef50_B9L0F4 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0F4_THERP Length = 413 Score = 95.3 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 47/157 (29%), Gaps = 18/157 (11%) Query: 13 RVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRV 72 +P + P + +H + A V Sbjct: 173 WLPPSAPNRPGFPLQPAWITIHETANENPGADAEAHRRF-----------VHAGGGPEGV 221 Query: 73 SAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQ 132 S H ++ D E VQ +P + WHAG N S+ IEL + Q + Sbjct: 222 SFHFVVD-DREAVQLLPVVENGWHAGDG---PSGPGNRTSVAIELCVHAGSDWARTQ-EH 276 Query: 133 LAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAF 169 A +T AL + A+ + H + K P Sbjct: 277 GARLTAALCRAFGLPAERVVPHQRWSG--KGCPRRLL 311 >UniRef50_UPI0001C1705F AmpD n=2 Tax=Nostocaceae RepID=UPI0001C1705F Length = 285 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 70/206 (33%), Gaps = 52/206 (25%) Query: 5 QGWLVGARRVPSPHYDCRPDDET-------PTLLVVHNISLPPGEFGGPWIDALFTGTID 57 Q L A+ PS +Y R +T ++V+H + Sbjct: 86 QPKLAAAQVHPS-NYGERFSRDTKGMAVSNQPIIVLHET-TYSARSAINYFQNHNVDE-- 141 Query: 58 PQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRER---------- 107 ++ S H +I RDG ++ VP DKRA+ AG S ++ + Sbjct: 142 -----------DIQASYHAIIARDGTVIYLVPPDKRAFGAGNSVFKNTDGTIETVQTNPK 190 Query: 108 ----CNDFSIGIELEGTDTLA----------YTDAQYQQLAAVTRALIDCYPDIAKNMTG 153 N+F+ + LE YT QY LA + +T Sbjct: 191 LAPSVNNFAYHVSLETPPDGWGKRDIREHSGYTQEQYNSLAWLIA----QSQVPDNRITT 246 Query: 154 HCDIA-PDRKTDPGPAFDWARFRVLV 178 H + + K DP +FD+ RF + Sbjct: 247 HRAVDVANGKVDP-LSFDFDRFFKKL 271 >UniRef50_Q2NVA7 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NVA7_SODGM Length = 201 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 41/111 (36%), Gaps = 16/111 (14%) Query: 75 HCL-IRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDT--------LAY 125 H + G + A S + GR ND SIGIE + Y Sbjct: 25 HYTAVDFAGSVRALSSD------AAFSAWAGRNNLNDTSIGIENVNLASVKNGKLIFPPY 78 Query: 126 TDAQYQQLAAVTRALIDCYP-DIAKNMTGHCDIAPDRKTDPGPAFDWARFR 175 Q + + + ++ YP + GH D+AP RK DPG AF W Sbjct: 79 HPVQIAAIIQLAQDILQRYPDITPTQIIGHSDVAPGRKFDPGAAFPWQTLF 129 >UniRef50_A9AWP8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWP8_HERA2 Length = 250 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 20/153 (13%) Query: 20 DCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIR 79 D RP P+ V+H + G D L A V AH L+ Sbjct: 21 DYRPKGIKPSSAVIHTTNGNRGSSFEAEADYLE---------------ASSGVGAHYLVG 65 Query: 80 RDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRA 139 + G+I + +P RAWHAG ++ N SIGIE A+T Q LA + + Sbjct: 66 QRGQIAEILPPIYRAWHAGAAKDD---WINSRSIGIECHHAVGEAWTHEQRAALAWLCQR 122 Query: 140 LIDCYPDIAKNMTGHCDIA--PDRKTDPGPAFD 170 L+ + + + H +A RK DP D Sbjct: 123 LMADWSIVLGAIETHRFVALPAGRKPDPSDWTD 155 >UniRef50_A1UKT0 Peptidoglycan-binding domain 1 protein n=3 Tax=Mycobacterium RepID=A1UKT0_MYCSK Length = 232 Score = 94.6 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 50/167 (29%), Gaps = 30/167 (17%) Query: 27 TPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQ 86 ++VH+ Q H I RDG + Sbjct: 17 DIRGVMVHHTGSDTATAASIADGRPDLAGPLSQLH----------------IARDGTVT- 59 Query: 87 YVPFDKRAWHAGVSQ--YQGRERCNDFSIGIELEGTDTLA-------YTDAQYQQLAAVT 137 V AWHAG + + N +IGIE T T + DAQY L Sbjct: 60 -VVAAGVAWHAGAGRYRWLPANTGNRHTIGIECANTGTGPTAPHRTNWPDAQYLALVRCC 118 Query: 138 RALIDCYPDIAKNMTGHCDIAPD--RKTDPGPAFDWARFRVLVSKET 182 A++ A GH + A K DPG A D R + Sbjct: 119 AAIMRRLGFGAARTIGHREYAGGVQGKWDPG-AIDLDTLRADIQARI 164 >UniRef50_Q05S34 N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Synechococcus sp. RS9916 RepID=Q05S34_9SYNE Length = 292 Score = 94.6 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 41/185 (22%) Query: 16 SPHYDCRPD--------DETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEI 67 S ++ R +P L+V+H + D Sbjct: 100 STNFGTRESVDDWGRTLKASPELIVLHETVI-SEPATVNLFQTPHPRDED---------- 148 Query: 68 AHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGR---------ERCNDFSIGIELE 118 +VS H LI DG ++ VP RA+ +G+S + N+ ++ + L Sbjct: 149 ---QVSYHMLIATDGARLRIVPDQNRAYGSGMSAFGDATQRRQPGRVGSINNVALHVSLV 205 Query: 119 G--------TDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDR-KTDPGPAF 169 YT++QY+ LAA Y +T H + R + DP +F Sbjct: 206 TPADGRGNTDAHSGYTNSQYRSLAAQVLLWQAKYGIPLTRVTTHAAVDRSRTRYDP-RSF 264 Query: 170 DWARF 174 W RF Sbjct: 265 RWDRF 269 >UniRef50_A9NEW3 Ig-like domain surface-anchored protein with predicted N-acetylmuramoyl-L-alanine amidase activity n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEW3_ACHLI Length = 1009 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 46/147 (31%), Gaps = 18/147 (12%) Query: 24 DDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGE 83 +D+ + VH+ + G I +VS H I D Sbjct: 793 NDKNIHWITVHDTANTATGSGALSHANYLNNQA---------RINGAQVSWHYTID-DKA 842 Query: 84 IVQYVPFDKRAWHAGVSQ-----YQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTR 138 Q++P + AWHAG N +I IE+ +Q+ A + Sbjct: 843 FYQHIPEGEVAWHAGDGSNLVGQGSYLGGGNRNAIAIEMSVAMGDDLYRI-WQRTAKFSA 901 Query: 139 ALIDCYPDIAKNMTGHCDIAPDRKTDP 165 + Y +++ H + K P Sbjct: 902 ETLVKYNLPREHIKFHQHFSG--KHCP 926 >UniRef50_D1Y7B5 Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7B5_9BACT Length = 158 Score = 93.8 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 55/148 (37%), Gaps = 26/148 (17%) Query: 26 ETPTLLVVHNISL-PPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEI 84 L+V+H + P G I+ F+ + L + H +IRRDG + Sbjct: 5 RKIDLIVIHCAATKPSMNVGAKEINIWHRQR------GFYNPASGLSIGYHYVIRRDGTV 58 Query: 85 VQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT-------DTLAYTDAQYQQLAAVT 137 P ++ HA + N SIGI L G YT+ Q++ L A+ Sbjct: 59 ETGRPVNQPGAHA--------KGYNANSIGICLIGGLNQDTGKPEANYTEKQWEALLALV 110 Query: 138 RALIDCYPDIAKNMTGHCDIAPDRKTDP 165 +L Y + GH +A K P Sbjct: 111 VSLCKEYGV--TKVVGHNQLAV--KDCP 134 >UniRef50_Q331X1 Putative N-acetylmuramoyl-L-alanine amidase n=2 Tax=root RepID=Q331X1_CBCP Length = 309 Score = 93.8 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 52/170 (30%), Gaps = 23/170 (13%) Query: 19 YDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLI 78 + + PT +V+H + H +L SAH + Sbjct: 12 HGAQGGANYPTWIVIHETDNEDKGA-------------NALCHARALANGNLSCSAHYYV 58 Query: 79 RRDGEIVQYVPFDKRAWHAGV--SQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAV 136 IVQ H GV N SIGIE+ Y+ A Q + Sbjct: 59 DES-NIVQVHEHWTVTSHVGVKYGTPPIGGIGNKNSIGIEICVNKDGNYSQA-RQNAIEL 116 Query: 137 TRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFD----WARFRVLVSKET 182 T+ LI A + H D +K P D W F+ +S + Sbjct: 117 TKYLISTTKIPASRVVRHYD--ACKKYCPRKMLDSLSLWNDFKSQISGNS 164 >UniRef50_C6IMI3 N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IMI3_9BACE Length = 165 Score = 93.8 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 55/163 (33%), Gaps = 33/163 (20%) Query: 26 ETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIV 85 PT +++H + D FT +H H IR+DG ++ Sbjct: 2 NKPTYIIIHCSATRE--------DKDFTEKQINDSHVARGFGKW---GYHYYIRKDGRVI 50 Query: 86 QYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT------DTLAYTDAQYQQLAAVTRA 139 ++ H + N SIGI EG TDAQ + + + + Sbjct: 51 PMRAENEIGAHDNFIVPGEKTSYNRCSIGICYEGGLDKNGKAKDTRTDAQKKAMRELVQD 110 Query: 140 LIDCYPDIAKNMTGHCDIAPDR------------KTDPGPAFD 170 + + I ++ GH D +PD+ K P FD Sbjct: 111 ICHRHDII--DILGHRDTSPDKNGNGIVEKCEWMKECP--CFD 149 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.151 0.500 Lambda K H 0.267 0.0464 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,351,828,486 Number of Sequences: 3077464 Number of extensions: 60335829 Number of successful extensions: 141794 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 639 Number of HSP's successfully gapped in prelim test: 706 Number of HSP's that attempted gapping in prelim test: 138778 Number of HSP's gapped (non-prelim): 1460 length of query: 183 length of database: 1,040,396,356 effective HSP length: 121 effective length of query: 62 effective length of database: 668,023,212 effective search space: 41417439144 effective search space used: 41417439144 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 89 (38.7 bits)