16 c1s2jA_ Probab=99.98   E-value=1.2e-32  Score=196.57  Aligned_columns=152  Identities=15%

Q ss_pred             CCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEE
Q ss_conf             46332454986788898888567999702578754436899986245344111002102665441376998799729980
Q batch____         8 LVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQY   87 (183)
Q Consensus         8 ~~~~~~~~spN~~~r~~~~~v~~IVIH~Ta~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~Hy~I~~dG~I~q~   87 (183)
                      ++-+.|...|.....+...++++||||||+.++..........+-.     .++.++..++|.++||||+|++||+|||+
T Consensus         5 v~R~~Wga~~~~~~~~~~~~v~~ivIHhT~~~~~~~~~~~~~~~r~-----iq~~h~~~~gw~dIgyhf~I~~dG~I~eg   79 (169)
T c1s2jA_           5 KLKRQWGGKPSLGLHYQVRPIRYVVIHHTVTGECSGLLKCAEILQN-----MQAYHQNELDFNDISYNFLIGNDGIVYEG   79 (169)
T ss_dssp             BCTGGGTCCCCSCCCBCCSSEEEEEEEECSSCCCCHHHHHHHHHHH-----HHHHHHHTSCCSSCSSSEEECTTSCEEES
T ss_pred             ECHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH-----HHHHHHHHCCCCCCCCCEEECCCCCEEEC
T ss_conf             2157726877667766557888899982688988898899999999-----99999750687777521798289818976


Q ss_pred             CCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECC-CCCCCCHHHHHHHHHHHHHHHHHCCCCHH-HEEECHHCCCCCCCCC
Q ss_conf             200141101366546775555555310136316-89988999999999999999997399987-7866124268887798
Q batch____        88 VPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT-DTLAYTDAQYQQLAAVTRALIDCYPDIAK-NMTGHCDIAPDRKTDP  165 (183)
Q Consensus        88 v~~~~~awHaG~~~~~~~~~~N~~sIGIe~~~~-~~~~~t~aq~~al~~L~a~l~~~y~i~~~-~I~gH~dv~~~~k~dP  165 (183)
                      |+++.+++|++        +.|..|||||++|. ..+.+|++|+++++.|+++++++|+|.++ +|+||+|+++  |.||
T Consensus        80 R~~~~~gah~~--------g~N~~sigI~~~G~~~~~~pt~~q~~a~~~Li~~~~~~~~i~~~~~i~gHrd~~~--t~CP  149 (169)
T c1s2jA_          80 TGWGLRGAHTY--------GYNAIGTGIAFIGNFVDKLPSDAALQAAKDLLACGVQQGELSEDYALIAGSQVIS--TQSP  149 (169)
T ss_dssp             SCTTBCCSSST--------TCSSSEEEEEESSCCSSSCCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEGGGTSS--SCTT
T ss_pred             CCCCCCCCCCC--------CCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC--CCCH
T ss_conf             88861325145--------7788638999973699988788899999999999998338898865995002888--7882


Q ss_pred             CCCC-----CHHHH
Q ss_conf             9988-----87999
Q batch____       166 GPAF-----DWARF  174 (183)
Q Consensus       166 G~~f-----~w~~~  174 (183)
                      |++|     .|.+|
T Consensus       150 G~~ly~~l~~w~~~  163 (169)
T c1s2jA_         150 GLTLYNEIQEWPHW  163 (169)
T ss_dssp             CHHHHHHHTTSTTB
T ss_pred             HHHHHHHCCCCCCC
T ss_conf             58999971327688