16 d1ny5a2 Probab=99.86   E-value=2e-20  Score=142.94  Aligned_columns=240  Identities=18%

Q ss_pred             HHCCCHHH----HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             62797899----99999884669837999189988989999999842421001123200001026887654345445100
Q batch____       192 DVIGQEQG----KRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRPFR  267 (506)
Q Consensus       192 dv~Gq~~a----kral~iAaag~h~iLL~G~PGtGKT~lAr~l~~ilp~l~~~e~~e~~~i~s~~g~~~~~~~~~~~pfr  267 (506)
                      |++||..+    ++.+..++..+.||||.||||||||++||+++..++..      ....++..++.........     
T Consensus         1 ~~ig~s~~~~~l~~~l~~~~~~~~~ILL~GppGtGKT~lAr~ia~~~~~~------~~~~~~i~~~~~~~~~~~~-----   69 (247)
T d1ny5a2           1 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRS------KEPFVALNVASIPRDIFEA-----   69 (247)
T ss_dssp             CCCCCSHHHHHHHHHHHHHTTCCSCEEEECSTTSSHHHHHHHHHHHSTTT------TSCEEEEETTTSCHHHHHH-----
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCC------CCCEEECCCCCCCHHHHHH-----
T ss_conf             90066999999999999983489859998798898999999999844677------8980660211068001134-----


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCEEEEECCCCC
Q ss_conf             47765341123455212278730103587787636102399999999999853965704688158946980999725764
Q batch____       268 SPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAMNPS  347 (506)
Q Consensus       268 ~ph~~~s~~~l~gg~~~~~pG~i~lAh~GVLfLDEi~~~~~~vl~~Ll~~LEeg~v~i~r~g~~~~~Pa~f~lIaA~NP~  347 (506)
                        ....+.....++....++|.+..|++|++|+||+++++++.++.|++.|+++.+..  .+.....+.++.+++++|..
T Consensus        70 --~~~~~~~~~~~~~~~~~~~~l~~a~~~~l~ideid~~~~~~~~~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~  145 (247)
T d1ny5a2          70 --ELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYR--LGGRKEIEVNVRILAATNRN  145 (247)
T ss_dssp             --HHHCBCTTSSTTCCSCBCCHHHHTTTSEEEEESGGGCCHHHHHHHHHHHHHSEECC--BTCCSCEECCCEEEEEESSC
T ss_pred             --HHCCCEECCCCCCCCCCCHHHHHCCCCEEEEECHHCCCHHHHHHHHHHHHCCCEEE--CCCCCEEECCCEECCCCCCC
T ss_conf             --43051001444422361118874689838861321068367899877753363887--68875330110000122479


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             33541577766898997787611763323432349997689837888863038897899887743999999620012324
Q batch____       348 PTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQNKLNAW  427 (506)
Q Consensus       348 ~~g~~~~~~~~~~~~~~~~~~~~ls~pLlDR~Dl~v~v~~~~~~~~~~~~~~~e~s~~~~~~v~~ar~~~~~r~~~~n~~  427 (506)
                      .+.              .....++...+..|+..............          .+...-+................ 
T Consensus       146 ~~~--------------~~~~~~~~~~~~~r~~~~~~~~~~l~~~~----------~~~~~l~~~~~~~~~~~~~~~~~-  200 (247)
T d1ny5a2         146 IKE--------------LVKEGKFREDLYYRLGVIEIEIPPLRERK----------EDIIPLANHFLKKFSRKYAKEVE-  200 (247)
T ss_dssp             HHH--------------HHHTTSSCHHHHHHHTTEEEECCCGGGCH----------HHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred             HHH--------------HHHCCCCCCHHHHHHCCCCCCCCCHHHHH----------HHHHHHHHHHHHHHHHHCCCCCC-
T ss_conf             788--------------63035234001110001323242112335----------66999999999999765188878-


Q ss_pred             CCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf             78999999852089999999999986298989999999999999987089968899999
Q batch____       428 LDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQ  486 (506)
Q Consensus       428 l~~~~l~~~v~l~~~a~~~l~~~~~~~~lS~R~~~~ilrvArtiAdL~g~~~V~~~dv~  486 (506)
                                .+++++.+.+..+.+.+++  |...++++-|   +.+...+.|+.+|+.
T Consensus       201 ----------~ls~~a~~~l~~~~~~gn~--reL~~~i~~a---~~~a~~~~I~~~dL~  244 (247)
T d1ny5a2         201 ----------GFTKSAQELLLSYPWYGNV--RELKNVIERA---VLFSEGKFIDRGELS  244 (247)
T ss_dssp             ----------EECHHHHHHHHHSCCTTHH--HHHHHHHHHH---HHHCCSSEECHHHHH
T ss_pred             ----------CCCHHHHHHHHCCCCCCCH--HHHHHHHHHH---HHHCCCCCCCHHHHH
T ss_conf             ----------7798999999758989878--9999999999---996589803588852