31 d1in4a2 Probab=99.71   E-value=3.9e-15  Score=110.96  Aligned_columns=209  Identities=32%

Q ss_pred             CHHHHCCCHHHHHHHHHHHCC-------CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf             655627978999999988466-------9837999189988989999999842421001123200001026887654345
Q batch____       189 DLSDVIGQEQGKRGLEITAAG-------GHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQW  261 (506)
Q Consensus       189 d~~dv~Gq~~akral~iAaag-------~h~iLL~G~PGtGKT~lAr~l~~ilp~l~~~e~~e~~~i~s~~g~~~~~~~~  261 (506)
                      .|.|++||+.+|..+..+...       .+|+||.||||||||++|++++.-+.............              
T Consensus         7 ~~~~iiG~~~~~~~l~~~i~~~~~~~~~~~~iLl~GppG~GKT~la~~ia~~l~~~~~~~~~~~~~--------------   72 (223)
T d1in4a2           7 SLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLV--------------   72 (223)
T ss_dssp             SGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCC--------------
T ss_pred             CHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCEE--------------
T ss_conf             887803609999999999999873687577389975899786479999999848987998410001--------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCEEEE
Q ss_conf             44510047765341123455212278730103587787636102399999999999853965704688158946980999
Q batch____       262 RQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLV  341 (506)
Q Consensus       262 ~~~pfr~ph~~~s~~~l~gg~~~~~pG~i~lAh~GVLfLDEi~~~~~~vl~~Ll~~LEeg~v~i~r~g~~~~~Pa~f~lI  341 (506)
                                         ......--.......+++++||+..+..+.++.+++.|++.....          ..+.++
T Consensus        73 -------------------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~i  123 (223)
T d1in4a2          73 -------------------KQGDMAAILTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDI----------QPFTLV  123 (223)
T ss_dssp             -------------------SHHHHHHHHHHCCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC----------CCCEEE
T ss_pred             -------------------EECCCHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCC----------CCEEEE
T ss_conf             -------------------100001235553035501100000248889999999984010022----------780699


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             72576433541577766898997787611763323432349997689837888863038897899887743999999620
Q batch____       342 AAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQ  421 (506)
Q Consensus       342 aA~NP~~~g~~~~~~~~~~~~~~~~~~~~ls~pLlDR~Dl~v~v~~~~~~~~~~~~~~~e~s~~~~~~v~~ar~~~~~r~  421 (506)
                      +++|...-                     ...+.+.|+...+.+..+..++..                    .+.....
T Consensus       124 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~--------------------~il~~~~  162 (223)
T d1in4a2         124 GATTRSGL---------------------LSSPLRSRFGIILELDFYTVKELK--------------------EIIKRAA  162 (223)
T ss_dssp             EEESCGGG---------------------SCHHHHTTCSEEEECCCCCHHHHH--------------------HHHHHHH
T ss_pred             EECCCCCC---------------------CCCHHHHHHHCCCCCCCCCHHHHH--------------------HHHHHHH
T ss_conf             96068532---------------------340233210000224699989999--------------------9999999


Q ss_pred             CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             01232478999999852089999999999986298989999999999999987089968899999999840166
Q batch____       422 NKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQEAVSYRAID  495 (506)
Q Consensus       422 ~~~n~~l~~~~l~~~v~l~~~a~~~l~~~~~~~~lS~R~~~~ilrvArtiAdL~g~~~V~~~dv~eAl~~R~~~  495 (506)
                      ...+..++...+...+..+              +-+.|...++++-+...|...+.+.|+.++|.+|+....+|
T Consensus       163 ~~~~~~~~~~~l~~i~~~~--------------~g~~R~~~~~l~~~~~~a~~~~~~~it~~~v~~~l~~~~~d  222 (223)
T d1in4a2         163 SLMDVEIEDAAAEMIAKRS--------------RGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNID  222 (223)
T ss_dssp             HHTTCCBCHHHHHHHHHTS--------------TTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHHTCC
T ss_pred             HHCCCCCCHHHHHHHHHHC--------------CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
T ss_conf             8628998768999999971--------------99989999999999999997088987989999999751888