18 c3pfiB_ Probab=99.84   E-value=2.8e-19  Score=136.02  Aligned_columns=205  Identities=26%

Q ss_pred             CHHHHCCCHHHHHHHHHHHCCC-------CCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf             6556279789999999884669-------837999189988989999999842421001123200001026887654345
Q batch____       189 DLSDVIGQEQGKRGLEITAAGG-------HNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQW  261 (506)
Q Consensus       189 d~~dv~Gq~~akral~iAaag~-------h~iLL~G~PGtGKT~lAr~l~~ilp~l~~~e~~e~~~i~s~~g~~~~~~~~  261 (506)
                      .|.|++||+.+|+.+..+...+       +|+||.||||||||++|++++..+                           
T Consensus         2 ~~~d~iG~e~~~~~l~~~i~~~~~~~~~~~~iLl~GppGtGKT~la~~ia~~~---------------------------   54 (283)
T c3pfiB_           2 NFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEX---------------------------   54 (283)
T ss_dssp             CSTTCCSCHHHHHHHHHHHHHHHHTTCCCCCEEEESSTTSSHHHHHHHHHHHT---------------------------
T ss_pred             CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---------------------------
T ss_conf             97681381999999999999986337888837997499998899999999960---------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCEEEE
Q ss_conf             44510047765341123455212278730103587787636102399999999999853965704688158946980999
Q batch____       262 RQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLV  341 (506)
Q Consensus       262 ~~~pfr~ph~~~s~~~l~gg~~~~~pG~i~lAh~GVLfLDEi~~~~~~vl~~Ll~~LEeg~v~i~r~g~~~~~Pa~f~lI  341 (506)
                       ..||...     ..................++++++|+||+..++++.|+.|+..+|++.              .+.++
T Consensus        55 -~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~il~lDEi~~l~~~~~~~l~~~~e~~~--------------~~~~i  114 (283)
T c3pfiB_          55 -SANIKTT-----AAPXIEKSGDLAAILTNLSEGDILFIDEIHRLSPAIEEVLYPAXEDYP--------------KFTLI  114 (283)
T ss_dssp             -TCCEEEE-----EGGGCCSSHHHHHHHHTCCTTCEEEEESGGGCCHHHHHHHHHHHHTCC--------------CCEEE
T ss_pred             -CCCEEEE-----ECHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCHHHHHHHHHHHHCCC--------------CEEEE
T ss_conf             -9979999-----700002289999988722678789980556759999999999740136--------------60684


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             72576433541577766898997787611763323432349997689837888863038897899887743999999620
Q batch____       342 AAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQ  421 (506)
Q Consensus       342 aA~NP~~~g~~~~~~~~~~~~~~~~~~~~ls~pLlDR~Dl~v~v~~~~~~~~~~~~~~~e~s~~~~~~v~~ar~~~~~r~  421 (506)
                      +++|.-..                     +..++.+|+...+.+......+......                       
T Consensus       115 ~~t~~~~~---------------------~~~~~~~r~~~~~~~~~~~~~~~~~~l~-----------------------  150 (283)
T c3pfiB_         115 GATTRAGX---------------------LSNPLRDRFGXQFRLEFYKDSELALILQ-----------------------  150 (283)
T ss_dssp             EEESCGGG---------------------SCHHHHTTCSEEEECCCCCHHHHHHHHH-----------------------
T ss_pred             EECCCHHH---------------------HHHHHHHHHHHHHHCCCCCHHHHHHHHH-----------------------
T ss_conf             21158444---------------------1100011002221035688889999999-----------------------


Q ss_pred             CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             01232478999999852089999999999986298989999999999999987089968899999999840166
Q batch____       422 NKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQEAVSYRAID  495 (506)
Q Consensus       422 ~~~n~~l~~~~l~~~v~l~~~a~~~l~~~~~~~~lS~R~~~~ilrvArtiAdL~g~~~V~~~dv~eAl~~R~~~  495 (506)
                              ...-...+.+++++.+.+...   ..-++|....+++.+...|...+.+.++.+++.+++.....+
T Consensus       151 --------~~~~~~~~~~~~~~~~~ia~~---~~g~~r~~~~~l~~~~~~a~~~~~~~i~~~~~~~~~~~~~~~  213 (283)
T c3pfiB_         151 --------KAALKLNKTCEEKAALEIAKR---SRSTPRIALRLLKRVRDFADVNDEEIITEKRANEALNSLGVN  213 (283)
T ss_dssp             --------HHHHHTTCEECHHHHHHHHHH---TTTCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHTCC
T ss_pred             --------HHHHHCCCCCCHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
T ss_conf             --------999983899757999999997---499989999999999999873056854889999999750654