57 c2chgB_ Probab=99.50   E-value=1.9e-12  Score=94.57  Aligned_columns=208  Identities=24%

Q ss_pred             CHHHHCCCHHHHHHHHHHHCCCC--CEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf             65562797899999998846698--3799918998898999999984242100112320000102688765434544510
Q batch____       189 DLSDVIGQEQGKRGLEITAAGGH--NLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRPF  266 (506)
Q Consensus       189 d~~dv~Gq~~akral~iAaag~h--~iLL~G~PGtGKT~lAr~l~~ilp~l~~~e~~e~~~i~s~~g~~~~~~~~~~~pf  266 (506)
                      .|.|++||+.+++.|.-+..++.  |+||.||||+|||++|+.++.-+                    ............
T Consensus        12 ~~~diig~~~~~~~l~~~l~~~~~~~~ll~Gp~G~GKT~la~~ia~e~--------------------~~~~~~~~~~~~   71 (222)
T c2chgB_          12 TLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDL--------------------FGENWRDNFIEM   71 (222)
T ss_dssp             SGGGCCSCHHHHHHHHHHHHTTCCCEEEEESCTTSSHHHHHHHHHHHH--------------------HGGGTGGGEEEE
T ss_pred             CHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH--------------------CCCCCCCCCCCC
T ss_conf             876702919999999999984999819997599886479999999741--------------------357655432211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCEEEEECCCC
Q ss_conf             04776534112345521227873010358778763610239999999999985396570468815894698099972576
Q batch____       267 RSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAMNP  346 (506)
Q Consensus       267 r~ph~~~s~~~l~gg~~~~~pG~i~lAh~GVLfLDEi~~~~~~vl~~Ll~~LEeg~v~i~r~g~~~~~Pa~f~lIaA~NP  346 (506)
                      ..........................-...++++||++.+....++.++..+++.             +..+.+|+++|+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~-------------~~~~~ii~~~~~  138 (222)
T c2chgB_          72 NASDERGIDVVRHKIKEFARTAPIGGAPFKIIFLDEADALTADAQAALRRTMEMY-------------SKSCRFILSCNY  138 (222)
T ss_dssp             ETTCTTCHHHHHHHHHHHHTSCCSTTCSCEEEEEETGGGSCHHHHHHHHHHHHHH-------------TTTEEEEEEESC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCC-------------CCCCEEEEECCC
T ss_conf             1000254201245667888654321246731675334578989999876654215-------------554147752210


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             43354157776689899778761176332343234999768983788886303889789988774399999962001232
Q batch____       347 SPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQNKLNA  426 (506)
Q Consensus       347 ~~~g~~~~~~~~~~~~~~~~~~~~ls~pLlDR~Dl~v~v~~~~~~~~~~~~~~~e~s~~~~~~v~~ar~~~~~r~~~~n~  426 (506)
                      -..                     +.+++..|+ ..+.+..++..+......                            
T Consensus       139 ~~~---------------------~~~~l~~r~-~~~~~~~~~~~~~~~iL~----------------------------  168 (222)
T c2chgB_         139 VSR---------------------IIEPIQSRC-AVFRFKPVPKEAMKKRLL----------------------------  168 (222)
T ss_dssp             GGG---------------------SCHHHHHTE-EEEECCCCCHHHHHHHHH----------------------------
T ss_pred             CCC---------------------CCCHHHHHH-HHHCCCCCCHHHHHHHHH----------------------------
T ss_conf             013---------------------671555566-530137889899999999----------------------------


Q ss_pred             CCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf             4789999998520899999999999862989899999999999999870899688999999998
Q batch____       427 WLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQEAVS  490 (506)
Q Consensus       427 ~l~~~~l~~~v~l~~~a~~~l~~~~~~~~lS~R~~~~ilrvArtiAdL~g~~~V~~~dv~eAl~  490 (506)
                         ...-..-+.+++++...+......   +.|....++..|...+     ..++.++|.+.+.
T Consensus       169 ---~~~~~~~~~~~~~~l~~i~~~~~g---diR~ain~l~~a~~~~-----~~i~~~~v~~i~~  221 (222)
T c2chgB_         169 ---EICEKEGVKITEDGLEALIYISGG---DFRKAINALQGAAAIG-----EVVDADTIYQITA  221 (222)
T ss_dssp             ---HHHHHHTCEECHHHHHHHHHHHTT---CHHHHHHHHHHHHTTC-----SEECHHHHHHHHH
T ss_pred             ---HHHHCCCCCCCHHHHHHHHHHHCC---CHHHHHHHHHHHHHHC-----CCCCHHHHHHHHC
T ss_conf             ---853104777898999999998299---9899999999999848-----8999899999757