27 c1in8A_ Probab=99.78   E-value=1.2e-16  Score=120.12  Aligned_columns=204  Identities=32%

Q ss_pred             CHHHHCCCHHHHHHHHHHHCC-------CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf             655627978999999988466-------9837999189988989999999842421001123200001026887654345
Q batch____       189 DLSDVIGQEQGKRGLEITAAG-------GHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQW  261 (506)
Q Consensus       189 d~~dv~Gq~~akral~iAaag-------~h~iLL~G~PGtGKT~lAr~l~~ilp~l~~~e~~e~~~i~s~~g~~~~~~~~  261 (506)
                      .|.|++||+.++..|..++..       -+|+||.||||||||++|++++..+         ....++..+....     
T Consensus         7 ~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~l---------~~~~~~i~~~~~~-----   72 (298)
T c1in8A_           7 SLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL---------QTNIHVTSGPVLV-----   72 (298)
T ss_dssp             SGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH---------TCCEEEEETTTCC-----
T ss_pred             CHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---------CCCEEEEECCCCC-----
T ss_conf             97781270999999999999986338888857998698898889999999970---------9979999415533-----


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCEEEE
Q ss_conf             44510047765341123455212278730103587787636102399999999999853965704688158946980999
Q batch____       262 RQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLV  341 (506)
Q Consensus       262 ~~~pfr~ph~~~s~~~l~gg~~~~~pG~i~lAh~GVLfLDEi~~~~~~vl~~Ll~~LEeg~v~i~r~g~~~~~Pa~f~lI  341 (506)
                                         .............+++++|+||++.++.+.++.|+..|+++....          ..+..+
T Consensus        73 -------------------~~~~~~~~~~~~~~~~il~~dei~~l~~~~~~~l~~~l~~~~~~~----------~~~~~~  123 (298)
T c1in8A_          73 -------------------KQGDMAAILTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDI----------QPFTLV  123 (298)
T ss_dssp             -------------------SHHHHHHHHHTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSCCCC----------CCCEEE
T ss_pred             -------------------CCHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHCCCCCC----------CEEEEC
T ss_conf             -------------------201245668851379989994236769899999999970553344----------406652


Q ss_pred             ECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             72576433541577766898997787611763323432349997689837888863038897899887743999999620
Q batch____       342 AAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQ  421 (506)
Q Consensus       342 aA~NP~~~g~~~~~~~~~~~~~~~~~~~~ls~pLlDR~Dl~v~v~~~~~~~~~~~~~~~e~s~~~~~~v~~ar~~~~~r~  421 (506)
                      ..+|....                     +..+...++...+....+...+..                    .+...+.
T Consensus       124 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~  162 (298)
T c1in8A_         124 GATVRSGL---------------------LSSPLRSRFGIILELDFYTVKELK--------------------EIIKRAA  162 (298)
T ss_dssp             EEESCGGG---------------------SCHHHHTTCSEEEECCCCCHHHHH--------------------HHHHHHH
T ss_pred             CCCCCHHH---------------------CCCHHHHHHHHHCCCCCCCHHHHH--------------------HHHHHHH
T ss_conf             65458563---------------------146433234431136789899999--------------------9999999


Q ss_pred             CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf             012324789999998520899999999999862989899999999999999870899688999999998
Q batch____       422 NKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQEAVS  490 (506)
Q Consensus       422 ~~~n~~l~~~~l~~~v~l~~~a~~~l~~~~~~~~lS~R~~~~ilrvArtiAdL~g~~~V~~~dv~eAl~  490 (506)
                      ...+..++...++.....+              .-+.|...++++.+...|..++.+.|+.+++.+|+.
T Consensus       163 ~~~~~~~~~~~~~~i~~~~--------------~g~~R~~~~ll~~~~~~~~~~~~~~i~~~~i~~~~~  217 (298)
T c1in8A_         163 SLMDVEIEDAAAEMIAKRS--------------RGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTME  217 (298)
T ss_dssp             HHTTCCBCHHHHHHHHHTS--------------TTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHH
T ss_pred             HHCCCCCCHHHHHHHHHHC--------------CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf             9829855889999999983--------------999899999999999999852988769899999997