29 c1in8A_ Probab=99.28   E-value=1.8e-09  Score=82.89  Aligned_columns=212  Identities=22%

Q ss_pred             CHHEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             10203563899999999997632457433179997699862899999998410102454335555678555588621340
Q batch____        75 FEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNP  154 (644)
Q Consensus        75 ~d~iiG~~~ai~~~~~~~~~~a~~~~~~~r~vLL~Gp~GtGKS~la~al~~ll~~~~ly~~~~~~~~~P~~e~P~~~i~~  154 (644)
                      +++++|++..++.+...+ ..+...+..-.++||+||+|||||++|++|++                             
T Consensus         8 ~~d~iG~e~~~~~L~~~i-~~~~~~~~~~~~ill~GppGtGKT~la~~ia~-----------------------------   57 (298)
T c1in8A_           8 LDEFIGQENVKKKLSLAL-EAAKMRGEVLDHVLLAGPPGLGKTTLAHIIAS-----------------------------   57 (298)
T ss_dssp             GGGCCSCHHHHHHHHHHH-HHHHHHTCCCCCEEEESSTTSSHHHHHHHHHH-----------------------------
T ss_pred             HHHHCCHHHHHHHHHHHH-HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHH-----------------------------
T ss_conf             778127099999999999-99863388888579986988988899999999-----------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf             24577777642102444310013568988775047531110434321011366542326448776640233043311111
Q batch____       155 QEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKL  234 (644)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~v~v~~~~~sr~~r~gi~v~~padp~~~~eseLfGdv~~~~~  234 (644)
                                                                      ..+.+++.++|............+        
T Consensus        58 ------------------------------------------------~l~~~~~~i~~~~~~~~~~~~~~~--------   81 (298)
T c1in8A_          58 ------------------------------------------------ELQTNIHVTSGPVLVKQGDMAAIL--------   81 (298)
T ss_dssp             ------------------------------------------------HHTCCEEEEETTTCCSHHHHHHHH--------
T ss_pred             ------------------------------------------------HCCCCEEEEECCCCCCCHHHHHHH--------
T ss_conf             ------------------------------------------------709979999415533201245668--------


Q ss_pred             CCCCCCCCHHCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCEEECCEEEEECCCHHHHHHHHCC
Q ss_conf             24467780110648861233794899950226998999999987404416306887224323688853785589887437
Q batch____       235 EHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNN  314 (644)
Q Consensus       235 ~~g~~t~p~~~~~~G~~~~An~GilflDEI~~l~~~~Q~~LL~vlQEk~v~~~G~~~~~~vD~~IIaaTN~~~~~~~~~~  314 (644)
                                      ....+++++++||+..++.+.|..|+.++++....       ...-+.+....+...       
T Consensus        82 ----------------~~~~~~~il~~dei~~l~~~~~~~l~~~l~~~~~~-------~~~~~~~~~~~~~~~-------  131 (298)
T c1in8A_          82 ----------------TSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQID-------IQPFTLVGATVRSGL-------  131 (298)
T ss_dssp             ----------------HTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSCCC-------CCCCEEEEEESCGGG-------
T ss_pred             ----------------HHHCCCCEEEEEEHHHCCHHHHHHHHHHHHCCCCC-------CCEEEECCCCCCHHH-------
T ss_conf             ----------------85137998999423676989999999997055334-------440665265458563-------


Q ss_pred             CCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             66301665311573344376236899999984212568862163589998888987512775688999986764245356
Q batch____       315 KNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGESLK  394 (644)
Q Consensus       315 ~~~e~l~dRi~~i~vpy~~~~~~E~kIy~~~~~~~~~~~~hiaPh~le~aa~~~VltRL~~~~~~~ll~Km~lY~ge~~~  394 (644)
                       ...+...+...+-........+-..|.++.+...+..   +.+.+++..|..+                         .
T Consensus       132 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~-------------------------~  182 (298)
T c1in8A_         132 -LSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVE---IEDAAAEMIAKRS-------------------------R  182 (298)
T ss_dssp             -SCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCC---BCHHHHHHHHHTS-------------------------T
T ss_pred             -CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHC-------------------------C
T ss_conf             -1464332344311367898999999999999982985---5889999999983-------------------------9


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             6013589999997752353121288768999999998
Q batch____       395 DTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRV  431 (644)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~EG~~GiS~R~~~~~i~~~  431 (644)
                      +.-+.+..+-+.+......++..-++...+.+++...
T Consensus       183 g~~R~~~~ll~~~~~~~~~~~~~~i~~~~i~~~~~~~  219 (298)
T c1in8A_         183 GTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVL  219 (298)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf             9989999999999999985298876989999999751