Phyre 2 Results for P0A6M4

Email | l.a.kelley@imperial.ac.uk
Description | P0A6M4
Date | Thu Jan 5 11:03:33 GMT 2012
Unique Job ID | 4094e3cf6bd409f9

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1jkea_ |
|  | 100.0 | 100 | Fold:DTD-like Superfamily:DTD-like Family:DTD-like
2 | d1j7ga_ |
|  | 100.0 | 68 | Fold:DTD-like Superfamily:DTD-like Family:DTD-like
3 | c2dboA_ |
|  | 100.0 | 44 | PDB header:hydrolase Chain: A: PDB Molecule:d-tyrosyl-trna(tyr) deacylase; PDBTitle: crystal structure of d-tyr-trna(tyr) deacylase from aquifex aeolicus
4 | c3ko7E_ |
|  | 100.0 | 31 | PDB header:hydrolase Chain: E: PDB Molecule:d-tyrosyl-trna(tyr) deacylase; PDBTitle: dtd from plasmodium falciparum in complex with d-lysine
5 | c2okvC_ |
|  | 100.0 | 41 | PDB header:hydrolase Chain: C: PDB Molecule:probable d-tyrosyl-trna(tyr) deacylase 1; PDBTitle: c-myc dna unwinding element binding protein
6 | d1tc5a_ |
|  | 100.0 | 19 | Fold:DTD-like Superfamily:DTD-like Family:DTD-like
7 | d2k8ea1 |
|  | 68.6 | 8 | Fold:YegP-like Superfamily:YegP-like Family:YegP-like
8 | d2k49a2 |
|  | 67.1 | 12 | Fold:YegP-like Superfamily:YegP-like Family:YegP-like
9 | d3bida1 |
|  | 66.5 | 20 | Fold:YegP-like Superfamily:YegP-like Family:YegP-like
10 | d2k7ia1 |
|  | 61.3 | 20 | Fold:YegP-like Superfamily:YegP-like Family:YegP-like
11 | c2k7iB_ |
|  | 61.3 | 20 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:upf0339 protein atu0232; PDBTitle: solution nmr structure of protein atu0232 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att3. ontario center for structural proteomics target atc0223.
12 | c2k49A_ |
|  | 55.9 | 12 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0339 protein so_3888; PDBTitle: solution nmr structure of upf0339 protein so3888 from shewanella2 oneidensis. northeast structural genomics consortium target sor190
13 | c2k8eA_ |
|  | 52.1 | 8 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0339 protein yegp; PDBTitle: solution nmr structure of protein of unknown function yegp from e.2 coli. ontario center for structural proteomics target ec0640_1_1233 northeast structural genomics consortium target et102.
14 | d1s7ia_ |
|  | 45.8 | 8 | Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:DGPF domain (Pfam 04946)
15 | c2z8nB_ |
|  | 45.0 | 19 | PDB header:lyase Chain: B: PDB Molecule:27.5 kda virulence protein; PDBTitle: structural basis for the catalytic mechanism of phosphothreonine lyase
16 | d1llna_ |
|  | 35.7 | 23 | Fold:Ribosome inactivating proteins (RIP) Superfamily:Ribosome inactivating proteins (RIP) Family:Plant cytotoxins
17 | c3i0uA_ |
|  | 26.4 | 16 | PDB header:lyase Chain: A: PDB Molecule:phosphothreonine lyase ospf; PDBTitle: structure of the type iii effector/phosphothreonine lyase ospf from2 shigella flexneri
18 | c1k6mA_ |
|  | 23.3 | 6 | PDB header:transferase, hydrolase Chain: A: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6- PDBTitle: crystal structure of human liver 6-phosphofructo-2-2 kinase/fructose-2,6-bisphosphatase
19 | c2dclB_ |
|  | 23.2 | 28 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical upf0166 protein ph1503; PDBTitle: structure of ph1503 protein from pyrococcus horikoshii ot3
20 | d2k8ea2 |
|  | 21.8 | 26 | Fold:YegP-like Superfamily:YegP-like Family:YegP-like
21 | c2dgaA_ |
| not modelled | 19.9 | 31 | PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of hexameric beta-glucosidase in wheat
22 | d1onka_ |
| not modelled | 19.6 | 16 | Fold:Ribosome inactivating proteins (RIP) Superfamily:Ribosome inactivating proteins (RIP) Family:Plant cytotoxins
23 | c3gnoA_ |
| not modelled | 19.5 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:os03g0212800 protein; PDBTitle: crystal structure of a rice os3bglu6 beta-glucosidase
24 | d2giab1 |
| not modelled | 16.3 | 22 | Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:Guide RNA binding protein gBP
25 | c2giaB_ |
| not modelled | 16.3 | 22 | PDB header:translation Chain: B: PDB Molecule:mitochondrial rna-binding protein 1; PDBTitle: crystal structures of trypanosoma bruciei mrp1/mrp2
26 | c1bifA_ |
| not modelled | 15.7 | 10 | PDB header:bifunctional enzyme Chain: A: PDB Molecule:6-phosphofructo-2-kinase/ fructose-2,6-bisphosphatase; PDBTitle: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase bifunctional2 enzyme complexed with atp-g-s and phosphate
27 | d2d6fc3 |
| not modelled | 15.6 | 19 | Fold:Glutamine synthetase/guanido kinase Superfamily:Glutamine synthetase/guanido kinase Family:GatB/GatE catalytic domain-like
28 | c3tekA_ |
| not modelled | 14.6 | 31 | PDB header:dna binding protein Chain: A: PDB Molecule:thermodbp-single stranded dna binding protein; PDBTitle: thermodbp: a non-canonical single-stranded dna binding protein with a2 novel structure and mechanism
29 | d1a9xb2 |
| not modelled | 13.4 | 42 | Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT)
30 | c2d6fC_ |
| not modelled | 13.3 | 19 | PDB header:ligase/rna Chain: C: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit e; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
31 | d1ofua2 |
| not modelled | 11.6 | 17 | Fold:Bacillus chorismate mutase-like Superfamily:Tubulin C-terminal domain-like Family:Tubulin, C-terminal domain
32 | c2xtsD_ |
| not modelled | 10.3 | 23 | PDB header:oxidoreductase/electron transport Chain: D: PDB Molecule:cytochrome; PDBTitle: crystal structure of the sulfane dehydrogenase soxcd from paracoccus2 pantotrophus
33 | d2k49a1 |
| not modelled | 10.1 | 25 | Fold:YegP-like Superfamily:YegP-like Family:YegP-like
34 | d1ii2a2 |
| not modelled | 10.0 | 11 | Fold:PEP carboxykinase N-terminal domain Superfamily:PEP carboxykinase N-terminal domain Family:PEP carboxykinase N-terminal domain
35 | d1s9ra_ |
| not modelled | 9.9 | 21 | Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Arginine deiminase
36 | c2an7A_ |
| not modelled | 9.9 | 21 | PDB header:dna binding protein Chain: A: PDB Molecule:protein pard; PDBTitle: solution structure of the bacterial antidote pard
37 | d1s1ma1 |
| not modelled | 9.7 | 21 | Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT)
38 | d1nlqa_ |
| not modelled | 9.7 | 23 | Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Nucleoplasmin-like core domain Family:Nucleoplasmin-like core domain
39 | d1j3ba2 |
| not modelled | 9.5 | 28 | Fold:PEP carboxykinase N-terminal domain Superfamily:PEP carboxykinase N-terminal domain Family:PEP carboxykinase N-terminal domain
40 | d1rq2a2 |
| not modelled | 9.3 | 15 | Fold:Bacillus chorismate mutase-like Superfamily:Tubulin C-terminal domain-like Family:Tubulin, C-terminal domain
41 | d2ftsa1 |
| not modelled | 9.0 | 21 | Fold:beta-clip Superfamily:MoeA C-terminal domain-like Family:MoeA C-terminal domain-like
42 | c2hl2A_ |
| not modelled | 8.9 | 20 | PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase; PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase from pyrococcus abyssi in complex with an3 analog of seryladenylate
43 | d1nm3a2 |
| not modelled | 8.4 | 16 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
44 | d2j44a2 |
| not modelled | 8.4 | 13 | Fold:Prealbumin-like Superfamily:Starch-binding domain-like Family:PUD-like
45 | d1xrua1 |
| not modelled | 8.2 | 26 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:KduI-like
46 | c3h0mE_ |
| not modelled | 8.1 | 20 | PDB header:ligase Chain: E: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase PDBTitle: structure of trna-dependent amidotransferase gatcab from2 aquifex aeolicus
47 | c3h16A_ |
| not modelled | 8.1 | 14 | PDB header:signaling protein Chain: A: PDB Molecule:tir protein; PDBTitle: crystal structure of a bacteria tir domain, pdtir from2 paracoccus denitrificans
48 | c3k6sB_ |
| not modelled | 7.7 | 26 | PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-2; PDBTitle: structure of integrin alphaxbeta2 ectodomain
49 | d1k8wa5 |
| not modelled | 7.7 | 16 | Fold:Pseudouridine synthase Superfamily:Pseudouridine synthase Family:Pseudouridine synthase II TruB
50 | d2ob5a1 |
| not modelled | 7.7 | 21 | Fold:RbsD-like Superfamily:RbsD-like Family:RbsD-like
51 | d1o51a_ |
| not modelled | 7.7 | 15 | Fold:Ferredoxin-like Superfamily:GlnB-like Family:DUF190/COG1993
52 | c3r84O_ |
| not modelled | 7.5 | 19 | PDB header:transcription Chain: O: PDB Molecule:mediator of rna polymerase ii transcription subunit 11; PDBTitle: structure of the mediator head subcomplex med11/22
53 | c2g5xA_ |
| not modelled | 7.5 | 23 | PDB header:hydrolase Chain: A: PDB Molecule:ribosome-inactivating protein; PDBTitle: crystal structure of lychnin a type 1 ribosome inactivating2 protein (rip)
54 | d1cb0a_ |
| not modelled | 7.3 | 18 | Fold:Phosphorylase/hydrolase-like Superfamily:Purine and uridine phosphorylases Family:Purine and uridine phosphorylases
55 | d2f2ab2 |
| not modelled | 7.3 | 22 | Fold:Glutamine synthetase/guanido kinase Superfamily:Glutamine synthetase/guanido kinase Family:GatB/GatE catalytic domain-like
56 | d1tf5a1 |
| not modelled | 7.3 | 38 | Fold:Pre-protein crosslinking domain of SecA Superfamily:Pre-protein crosslinking domain of SecA Family:Pre-protein crosslinking domain of SecA
57 | d1a79a1 |
| not modelled | 7.3 | 21 | Fold:Restriction endonuclease-like Superfamily:tRNA-intron endonuclease catalytic domain-like Family:tRNA-intron endonuclease catalytic domain-like
58 | c1keeH_ |
| not modelled | 7.2 | 42 | PDB header:ligase Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin
59 | d1ogda_ |
| not modelled | 7.2 | 17 | Fold:RbsD-like Superfamily:RbsD-like Family:RbsD-like
60 | c2v4uA_ |
| not modelled | 7.1 | 21 | PDB header:ligase Chain: A: PDB Molecule:ctp synthase 2; PDBTitle: human ctp synthetase 2 - glutaminase domain in complex with2 5-oxo-l-norleucine
61 | c3epyA_ |
| not modelled | 7.0 | 22 | PDB header:lipid binding protein Chain: A: PDB Molecule:acyl-coa-binding domain-containing protein 7; PDBTitle: crystal structure of human acyl-coa binding domain 72 complexed with palmitoyl-coa
62 | d1wv8a1 |
| not modelled | 7.0 | 11 | Fold:TTHA1013/TTHA0281-like Superfamily:TTHA1013/TTHA0281-like Family:TTHA1013-like
63 | c2dzlA_ |
| not modelled | 6.7 | 38 | PDB header:structural genomics unknown function Chain: A: PDB Molecule:protein fam100b; PDBTitle: solution structure of the uba domain in human protein2 fam100b
64 | c2copA_ |
| not modelled | 6.7 | 26 | PDB header:lipid binding protein Chain: A: PDB Molecule:acyl-coenzyme a binding domain containing 6; PDBTitle: solution structure of rsgi ruh-040, an acbp domain from2 human cdna
65 | d1ce7a_ |
| not modelled | 6.5 | 25 | Fold:Ribosome inactivating proteins (RIP) Superfamily:Ribosome inactivating proteins (RIP) Family:Plant cytotoxins
66 | c2pebB_ |
| not modelled | 6.4 | 30 | PDB header:oxidoreductase Chain: B: PDB Molecule:putative dioxygenase; PDBTitle: crystal structure of a putative dioxygenase (npun_f1925) from nostoc2 punctiforme pcc 73102 at 1.46 a resolution
67 | c3mk9A_ |
| not modelled | 6.4 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:ricin; PDBTitle: stabilized ricin immunogen 1-33/44-198
68 | c3mvkA_ |
| not modelled | 6.4 | 18 | PDB header:isomerase Chain: A: PDB Molecule:protein fucu; PDBTitle: the crystal structure of fucu from bifidobacterium longum to 1.65a
69 | c1a79B_ |
| not modelled | 6.3 | 21 | PDB header:endonuclease Chain: B: PDB Molecule:trna endonuclease; PDBTitle: crystal structure of the trna splicing endonuclease from2 methanococcus jannaschii
70 | d2olra2 |
| not modelled | 6.1 | 14 | Fold:PEP carboxykinase N-terminal domain Superfamily:PEP carboxykinase N-terminal domain Family:PEP carboxykinase N-terminal domain
71 | d1gtfa_ |
| not modelled | 6.1 | 32 | Fold:Double-stranded beta-helix Superfamily:TRAP-like Family:Trp RNA-binding attenuation protein (TRAP)
72 | d1kska3 |
| not modelled | 6.1 | 56 | Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Pseudouridine synthase RsuA N-terminal domain
73 | d1i96v_ |
| not modelled | 6.1 | 23 | Fold:IF3-like Superfamily:Translation initiation factor IF3, C-terminal domain Family:Translation initiation factor IF3, C-terminal domain
74 | c3icgD_ |
| not modelled | 6.0 | 8 | PDB header:hydrolase Chain: D: PDB Molecule:endoglucanase d; PDBTitle: crystal structure of the catalytic and carbohydrate binding domain of2 endoglucanase d from clostridium cellulovorans
75 | c2i1vB_ |
| not modelled | 5.7 | 10 | PDB header:transferase, hydrolase Chain: B: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6- PDBTitle: crystal structure of pfkfb3 in complex with adp and2 fructose-2,6-bisphosphate
76 | d1rxxa_ |
| not modelled | 5.7 | 18 | Fold:Pentein, beta/alpha-propeller Superfamily:Pentein Family:Arginine deiminase
77 | c2z5sN_ |
| not modelled | 5.6 | 11 | PDB header:cell cycle Chain: N: PDB Molecule:mdm4 protein; PDBTitle: molecular basis for the inhibition of p53 by mdmx
78 | c2g5iB_ |
| not modelled | 5.6 | 22 | PDB header:ligase Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase PDBTitle: structure of trna-dependent amidotransferase gatcab2 complexed with adp-alf4
79 | d1t4aa_ |
| not modelled | 5.4 | 21 | Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase
80 | c3al0B_ |
| not modelled | 5.3 | 22 | PDB header:ligase/rna Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b; PDBTitle: crystal structure of the glutamine transamidosome from thermotoga2 maritima in the glutamylation state.
81 | c2yx5A_ |
| not modelled | 5.2 | 10 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0062 protein mj1593; PDBTitle: crystal structure of methanocaldococcus jannaschii purs, one of the2 subunits of formylglycinamide ribonucleotide amidotransferase in the3 purine biosynthetic pathway
82 | d1p8ja1 |
| not modelled | 5.2 | 18 | Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Proprotein convertase P-domain
83 | d2q3na1 |
| not modelled | 5.2 | 13 | Fold:Ribosome inactivating proteins (RIP) Superfamily:Ribosome inactivating proteins (RIP) Family:Plant cytotoxins