Phyre 2 alignment of P0A6M4 with d1i96v_

Return to main results | Retrieve Phyre Job Id

Job Description | P0A6M4
Confidence | 6.07% | Date | Thu Jan 5 11:03:33 GMT 2012
Rank | 73 | Aligned Residues | 44
% Identity | 23% | Template | d1i96v_
SCOP info | IF3-like | Translation initiation factor IF3, C-terminal domain | Translation initiation factor IF3, C-terminal domain
Resolution | 4.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |  |  |  |  | . | . | 120 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | F | T | L | A | A | D | T | E | R | G | M | R | P | S | F | S | K | G | A | S | P | D | R | A | E | A | L | Y | D | Y | F | V | E | R | C | R | Q | Q | E | . | . | . | . | M | N | T | Q | T | G | R | F | A | A | D | M
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | V | T | I | M | F | . | . | . | R | G | R | E | . | . | . | . | . | V | A | H | P | E | L | G | E | R | I | L | N | R | V | T | E | D | L | K | D | L | A | V | V | E | M | K | P | E | M | L | G | R | D | M | N | M | L
Template Known Secondary structure |  | S |  |  |  |  |  | . | . | . |  |  |  |  | . | . | . | . | . | S | S | S | S |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  | S |  |  |  |  |  |  | T | T | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 116 | . | . | . | 120 | . |  |  |  | . | . | . | . |  |  |  |  |  | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions