Phyre 2 alignment of P0A6M4 with c2d6fC_

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Job Description | P0A6M4
Confidence | 13.31% | Date | Thu Jan 5 11:03:33 GMT 2012
Rank | 30 | Aligned Residues | 42
% Identity | 19% | Template | c2d6fC_
PDB info | PDB header:ligase/rna | Chain: C: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit e; | PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
Resolution | 3.15 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | R | P | S | F | S | K | G | A | S | P | D | R | A | E | A | L | Y | D | Y | F | V | E | R | C | R | Q | Q | E | M | N | T | Q | T | G | R | F | A | A | D | M | Q | V | S | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | D | P | S | M | S | . | . | . | D | P | Q | Q | L | R | E | V | A | Y | Q | I | G | Q | I | L | R | S | T | R | V | K | R | G | L | G | T | I | R | Q | D | L | N | I | S | I
Template Known Secondary structure |  |  |  | S |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  | S | S | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 187 | . | . | 190 | . | . |  |  |  | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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