17/01/2012 07:27:07 : INFO  : Run start: Tue Jan 17 07:27:05 GMT 2012
17/01/2012 07:27:16 : INFO  : Initialised job
17/01/2012 07:27:19 : INFO  : Renaming log file 'phyre2_20120117_072704.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/4094e3cf6bd409f9/phyre_20120117_072704.log'
17/01/2012 07:27:21 : INFO  : Initialised job:
Sequence
>batch____
MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG
KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNT
QTGRFAADMQVSLVNDGPVTFWLQV

17/01/2012 07:27:23 : INFO  : Checked sequence
17/01/2012 07:27:29 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 07:27:31 : INFO  : PSI-BLAST 3 iterations
17/01/2012 07:28:54 : INFO  : PSI-BLAST 5 iterations
17/01/2012 07:30:22 : INFO  : Finished PSI-BLAST
17/01/2012 07:30:25 : INFO  : Running Buildali to generate a3m file
17/01/2012 07:37:36 : INFO  : Converting to HMM
17/01/2012 07:37:39 : INFO  : Calibrating HMM
17/01/2012 07:37:56 : INFO  : Searching HMM database
17/01/2012 07:41:13 : INFO  : Finished buildali
17/01/2012 07:41:16 : INFO  : Predicting secondary structure
17/01/2012 07:41:31 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 07:41:34 : INFO  : Predicting Disordered regions
17/01/2012 07:41:42 : INFO  : Predicted Disorder (Disopred)
17/01/2012 07:41:45 : INFO  : Running memsat_svm check
17/01/2012 07:45:39 : INFO  : Globular protein
17/01/2012 07:45:42 : INFO  : Predicted Transmembrane (memsat_svm) ID '4094e3cf6bd409f9'
17/01/2012 07:45:45 : INFO  : Initialising fold library search
17/01/2012 07:45:50 : INFO  : Initialised search input
17/01/2012 07:45:54 : INFO  : Building Ensemble models
17/01/2012 07:46:00 : INFO  : Building hh.d1jkea_.model.1.pdb
17/01/2012 07:46:32 : INFO  : Building d1jkea_.1.pdb
17/01/2012 07:47:00 : INFO  : Building d1j7ga_.2.pdb
17/01/2012 07:47:27 : INFO  : Building c2dboA_.3.pdb
17/01/2012 07:47:52 : INFO  : Building c3ko7E_.4.pdb
17/01/2012 07:48:20 : INFO  : Building c2okvC_.5.pdb
17/01/2012 07:48:49 : INFO  : Building d1tc5a_.6.pdb
17/01/2012 07:49:17 : INFO  : Building d2k8ea1.7.pdb
17/01/2012 07:49:43 : INFO  : Building d2k49a2.8.pdb
17/01/2012 07:50:11 : INFO  : Building d3bida1.9.pdb
17/01/2012 07:50:39 : INFO  : Building d2k7ia1.10.pdb
17/01/2012 07:51:06 : INFO  : Building c2k7iB_.11.pdb
17/01/2012 07:51:33 : INFO  : Building c2k49A_.12.pdb
17/01/2012 07:52:00 : INFO  : Building c2k8eA_.13.pdb
17/01/2012 07:52:25 : INFO  : Building d1s7ia_.14.pdb
17/01/2012 07:52:52 : INFO  : Building c2z8nB_.15.pdb
17/01/2012 07:53:20 : INFO  : Building d1llna_.16.pdb
17/01/2012 07:53:46 : INFO  : Building c3i0uA_.17.pdb
17/01/2012 07:54:11 : INFO  : Building c1k6mA_.18.pdb
17/01/2012 07:54:36 : INFO  : Building c2dclB_.19.pdb
17/01/2012 07:55:02 : INFO  : Building d2k8ea2.20.pdb
17/01/2012 07:55:58 : INFO  : Finished HH model building
17/01/2012 07:56:01 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 07:57:02 : INFO  : html domain output complete ID '4094e3cf6bd409f9'
17/01/2012 08:07:54 : INFO  : Run end  : Tue Jan 17 08:07:52 GMT 2012
