Phyre 2 alignment of P0A6M4 with c2an7A_

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Job Description | P0A6M4
Confidence | 9.88% | Date | Thu Jan 5 11:03:33 GMT 2012
Rank | 36 | Aligned Residues | 43
% Identity | 21% | Template | c2an7A_
PDB info | PDB header:dna binding protein | Chain: A: PDB Molecule:protein pard; | PDBTitle: solution structure of the bacterial antidote pard
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 33 | . | . | . | . | . | . | 40 | . | . | . | . |  | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |  | . | . | . | . | . | . | . | . | 70 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | E | K | D | D | D | E | Q | K | A | N | R | . | L | C | E | R | V | L | G | Y | R | I | F | S | D | A | E | G | K | . | M | N | L | N | V | Q | Q | A | G | G | S | V | L | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | F | P | G | D | A | D | A | D | Q | A | W | Q | E | L | K | T | M | L | G | N | R | I | N | D | G | L | A | G | K | V | S | T | K | S | V | G | E | I | L | D | E | E | L | S
Template Known Secondary structure |  | T | S |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | S |  | S |  |  |  | S | S |  |  | S |  |  | S | S | S |  |  |  |  |  | S | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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