Phyre 2 alignment of P0A6M4 with d1llna_

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Job Description | P0A6M4
Confidence | 35.71% | Date | Thu Jan 5 11:03:33 GMT 2012
Rank | 16 | Aligned Residues | 40
% Identity | 23% | Template | d1llna_
SCOP info | Ribosome inactivating proteins (RIP) | Ribosome inactivating proteins (RIP) | Plant cytotoxins
Resolution | 1.60

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 106 | . | . | . | 110 | . | . | . | . | . | . |  | . | . | . | 120 | . | . | . | . | . |  |  |  |  |  |  |  | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | D | Y | F | V | E | R | C | R | Q | Q | . | E | M | N | T | Q | T | G | R | F | . | . | . | . | . | . | . | A | A | D | M | Q | V | S | L | V | N | D | G | P | V | T | F | W | L | Q | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | S | N | F | L | T | S | L | R | E | A | V | D | K | L | T | C | H | G | M | I | M | A | T | T | L | T | E | Q | P | Y | V | L | V | D | L | F | G | S | G | T | F | T | L | A | I | R | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  | B |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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