Phyre 2 alignment of P0A6M4 with d1nlqa_

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Job Description | P0A6M4
Confidence | 9.66% | Date | Thu Jan 5 11:03:33 GMT 2012
Rank | 38 | Aligned Residues | 30
% Identity | 23% | Template | d1nlqa_
SCOP info | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Nucleoplasmin-like core domain | Nucleoplasmin-like core domain
Resolution | 1.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | K | M | N | L | N | V | Q | Q | A | G | G | S | V | L | V | V | S | Q | F | T | L | A | A | D | T | E | R | G | M | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | W | D | V | D | E | D | Y | A | R | G | Q | K | L | V | I | K | Q | I | L | L | G | A | E | A | K | E | N | E | F
Template Known Secondary structure |  |  |  |  | T | T | S | S |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  | B | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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