87 d1svia_ Probab=98.81   E-value=1.1e-06  Score=66.09  Aligned_columns=137  Identities=29%

Q ss_pred             HCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             02813898982268879999999709865768998410268999737887513784276035777766555442002210
Q batch____        66 SRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIK  145 (742)
Q Consensus        66 ~~~~~~iav~G~~saGKSslinallg~~~lp~~~~~~T~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (742)
                      ......|+++|..++|||||+|+|+|.++         .....+..                                  
T Consensus        20 ~~~~~~I~ivG~~n~GKSsLin~l~~~~~---------~~~~~~~~----------------------------------   56 (182)
T d1svia_          20 EGGLPEIALAGRSNVGKSSFINSLINRQT---------LNFYIIND----------------------------------   56 (182)
T ss_dssp             CSCCCEEEEEEBTTSSHHHHHHHHHTCCC---------EEEEEETT----------------------------------
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHCCCE---------EEEECCCC----------------------------------
T ss_conf             31484899976988889999999858855---------88846898----------------------------------


Q ss_pred             CCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECCC
Q ss_conf             00011000011123334201220355555333333331011134433210223200133320125677503889984168
Q batch____       146 HLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGL  225 (742)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  225 (742)
                                                                                                      
T Consensus        57 --------------------------------------------------------------------------------   56 (182)
T d1svia_          57 --------------------------------------------------------------------------------   56 (182)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCCCCCEEEEECCCCCCCCCCH-----HHHHHHHHH---HHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             5345886998788988976013-----899999873---02899999845887679758999999850268781899983
Q batch____       226 ESYPGQLTLLDTPGPNEAGQPH-----LQKMLNQQL---ARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVN  297 (742)
Q Consensus       226 ~~~~~~i~lvD~PG~~~~~~~~-----~~~~~~~~~---~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~n  297 (742)
                           .+..+|+||++......     ...+...|+   ..+++++++.++....+..+..+........  ...++++|
T Consensus        57 -----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  129 (182)
T d1svia_          57 -----ELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYG--IPVIVIAT  129 (182)
T ss_dssp             -----TEEEEECCCBCCCSSCHHHHHHHHHHHHHHHHHCTTEEEEEEEEETTSCCCHHHHHHHHHHHHTT--CCEEEEEE
T ss_pred             -----EEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCC--CCCCCCCC
T ss_conf             -----79999820014215771578999999999998435675998237888778899999877642100--12222111


Q ss_pred             CHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCHH
Q ss_conf             412034774539999999999987436776556641328
Q batch____       298 KFDQQDRNSDDADQVRALISGTLMKGCITPQQIFPVSSM  336 (742)
Q Consensus       298 k~D~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~s~~  336 (742)
                      +.|.....  ............+.......  ++++||+
T Consensus       130 ~~d~~~~~--~~~~~~~~~~~~~~~~~~~~--~i~vSA~  164 (182)
T d1svia_         130 KADKIPKG--KWDKHAKVVRQTLNIDPEDE--LILFSSE  164 (182)
T ss_dssp             CGGGSCGG--GHHHHHHHHHHHHTCCTTSE--EEECCTT
T ss_pred             CCCCCCCC--CHHHHHHHHHHHHHHCCCCC--EEEEECC
T ss_conf             21222222--00134454799874128982--9999778