40 c3md0A_ Probab=99.33   E-value=4.3e-11  Score=98.37  Aligned_columns=275  Identities=18%

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             999985320332024543442580-3179999999999997302813898982268879999999709865768998410
Q batch____        25 QLLEKMPLSVPGDDAPQLALPWSQ-PNIAERHAMLNNELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMT  103 (742)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~iav~G~~saGKSslinallg~~~lp~~~~~~T  103 (742)
                      +.++++..+-.+.........-+. ++...+...+-..........+.|||+|..++|||||+|+|+|....+.....+|
T Consensus         4 ~~~~~~~~g~r~~l~r~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~Iai~G~pnaGKSSLln~L~~~~~~~~~~~~~t   83 (301)
T c3md0A_           4 GLATAVRGGDRAALPRAITLVESTRPDHREQAQQLLLRLLPDSGNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVL   83 (301)
T ss_dssp             HHHHHHHTTCSSHHHHHHHHHHCCSHHHHHHHHHHHHHHGGGCCCSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEE
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             99999982587889999999960126589999999987533228972899973898878899999998764145767516


Q ss_pred             EEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf             26899973788751378427603577776655544200221000011000011123334201220355555333333331
Q batch____       104 ALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHC  183 (742)
Q Consensus       104 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (742)
                      +.+..-.+... ...+...+...-......                                                  
T Consensus        84 ~~~~~~~~~~~-~~~v~~~dt~G~~~~~~~--------------------------------------------------  112 (301)
T c3md0A_          84 AVRMARLAVHP-NAYIRPSTLGGVTRATRE--------------------------------------------------  112 (301)
T ss_dssp             ECCCHHHHTST-TEEEECCCHHHHHHHHHH--------------------------------------------------
T ss_pred             EECCEEEEEEC-CEEEEEEECCCCCCHHHH--------------------------------------------------
T ss_conf             77100136039-878999602341100367--------------------------------------------------


Q ss_pred             HCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEE
Q ss_conf             01113443321022320013332012567750388998416853458869987889889760138999998730289999
Q batch____       184 LKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVL  263 (742)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~lvD~PG~~~~~~~~~~~~~~~~~~~~~~i~  263 (742)
                                                                     ++.++|+||++.....+...+. .....+|.++
T Consensus       113 -----------------------------------------------~~~~~d~~~~d~~~~e~~~~~~-~~~~~~d~~~  144 (301)
T c3md0A_         113 -----------------------------------------------TVVLLEAAGFDVILIETGQSEV-AVANMVDTFV  144 (301)
T ss_dssp             -----------------------------------------------HHHHHHHTTCCEEEEECCCHHH-HHHTTCSEEE
T ss_pred             -----------------------------------------------HHHHHHHCCCCHHHHHHHHHHH-HHHHCCCEEE
T ss_conf             -----------------------------------------------8999642386521454368999-9861388557


Q ss_pred             EEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECHHCCCCCH--HHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHH
Q ss_conf             9845887679758999999850268781899983412034774--53999999999998743677655664132888864
Q batch____       264 AVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRNS--DDADQVRALISGTLMKGCITPQQIFPVSSMWGYLA  341 (742)
Q Consensus       264 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nk~D~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~v~~~s~~~~l~~  341 (742)
                      +|+++........      ..........++|+||+|..+...  .....+...+...........+.++++|++.+.  
T Consensus       145 ~v~d~~~~~~~~~------~~~~~~~~~~i~viNK~D~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~Sa~~g~--  216 (301)
T c3md0A_         145 LLTLARTGDQLQG------IKKGVLELADIVVVNKADGEHHKEARLAARELSAAIRLIYPREALWRPPVLTMSAVEGR--  216 (301)
T ss_dssp             EEEESCTTTTTTT------CCTTGGGGCSEEEEECCCGGGHHHHHHHHHHHHHHHHHHSTTCSSCCCCEEECBTTTTB--
T ss_pred             EEECCCCCHHHHH------HHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEECCCCC--
T ss_conf             9625578526787------54432367708985154678800132589999999753010002589838997278879--


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             42110233210011234566677632224545555644444565433379999860828899999999861100688999
Q batch____       342 NRARYELANNGKLPPPEQQRWVEDFAHAALGRRWRHADLADLEHIRHAADQLWEDSLFAQPIQALLHAAYANASLYALRS  421 (742)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~l~~~~~~~~~~~~~~~  421 (742)
                                                                              ++..+...+..++...........
T Consensus       217 --------------------------------------------------------gi~~L~~~l~~~~~~~~~~~~~~~  240 (301)
T c3md0A_         217 --------------------------------------------------------GLAELWDTVERHRQVLTGAGEFDA  240 (301)
T ss_dssp             --------------------------------------------------------SHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred             --------------------------------------------------------CHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             --------------------------------------------------------989999999999963013440468


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999975311466888999999999998754345
Q batch____       422 AAHKLLNYAQQAREYLDFRAHGLNVACEQLRQNIHQIEESLQL  464 (742)
Q Consensus       422 ~~~~l~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~  464 (742)
                      .  ........+.+.........-............+......
T Consensus       241 ~--~~~~~~~~~~e~~~e~l~~~~~~~~~~~~~~~~l~~~v~~  281 (301)
T c3md0A_         241 R--RRDQQVDWTWQLVRDAVLDRVWSNPTVRKVRSELERRVRA  281 (301)
T ss_dssp             H--HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred             H--HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf             8--8999999999999999999974044056669999999981